##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1840v1 #!genome-build-accession NCBI_Assembly:GCF_000018405.1 #!annotation-date 12/29/2022 00:43:04 #!annotation-source NCBI RefSeq ##sequence-region NC_009943.1 1 3944167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=96561 NC_009943.1 RefSeq region 1 3944167 . + . ID=NC_009943.1:1..3944167;Dbxref=taxon:96561;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;old-name=Candidatus Desulfococcus oleovorans Hxd3;strain=Hxd3;type-material=type strain of Desulfosudis oleivorans NC_009943.1 RefSeq gene 50 1432 . + . ID=gene-DOLE_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=DOLE_RS00005;old_locus_tag=Dole_0001 NC_009943.1 Protein Homology CDS 50 1432 . + 0 ID=cds-WP_012173430.1;Parent=gene-DOLE_RS00005;Dbxref=Genbank:WP_012173430.1;Name=WP_012173430.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: protein motif:HMM:TIGR00362.1;locus_tag=DOLE_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_012173430.1;transl_table=11 NC_009943.1 RefSeq gene 1624 3012 . + . ID=gene-DOLE_RS00010;Name=DOLE_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00010;old_locus_tag=Dole_0002 NC_009943.1 Protein Homology CDS 1624 3012 . + 0 ID=cds-WP_012173431.1;Parent=gene-DOLE_RS00010;Dbxref=Genbank:WP_012173431.1;Name=WP_012173431.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586885.1;locus_tag=DOLE_RS00010;product=FAD-binding protein;protein_id=WP_012173431.1;transl_table=11 NC_009943.1 RefSeq gene 3019 3234 . - . ID=gene-DOLE_RS00015;Name=DOLE_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00015;old_locus_tag=Dole_0003 NC_009943.1 GeneMarkS-2+ CDS 3019 3234 . - 0 ID=cds-WP_012173432.1;Parent=gene-DOLE_RS00015;Dbxref=Genbank:WP_012173432.1;Name=WP_012173432.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00015;product=hypothetical protein;protein_id=WP_012173432.1;transl_table=11 NC_009943.1 RefSeq gene 3231 4013 . - . ID=gene-DOLE_RS00020;Name=DOLE_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00020;old_locus_tag=Dole_0004 NC_009943.1 Protein Homology CDS 3231 4013 . - 0 ID=cds-WP_012173433.1;Parent=gene-DOLE_RS00020;Dbxref=Genbank:WP_012173433.1;Name=WP_012173433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877033.1;locus_tag=DOLE_RS00020;product=inositol monophosphatase family protein;protein_id=WP_012173433.1;transl_table=11 NC_009943.1 RefSeq gene 4067 5764 . - . ID=gene-DOLE_RS00025;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=DOLE_RS00025;old_locus_tag=Dole_0005 NC_009943.1 Protein Homology CDS 4067 5764 . - 0 ID=cds-WP_012173434.1;Parent=gene-DOLE_RS00025;Dbxref=Genbank:WP_012173434.1;Name=WP_012173434.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072942.1;locus_tag=DOLE_RS00025;product=GTPase HflX;protein_id=WP_012173434.1;transl_table=11 NC_009943.1 RefSeq gene 5815 7230 . - . ID=gene-DOLE_RS00030;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=DOLE_RS00030;old_locus_tag=Dole_0006 NC_009943.1 Protein Homology CDS 5815 7230 . - 0 ID=cds-WP_012173435.1;Parent=gene-DOLE_RS00030;Dbxref=Genbank:WP_012173435.1;Name=WP_012173435.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072943.1;locus_tag=DOLE_RS00030;product=replicative DNA helicase;protein_id=WP_012173435.1;transl_table=11 NC_009943.1 RefSeq gene 7279 7734 . - . ID=gene-DOLE_RS00035;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=DOLE_RS00035;old_locus_tag=Dole_0007 NC_009943.1 Protein Homology CDS 7279 7734 . - 0 ID=cds-WP_012173436.1;Parent=gene-DOLE_RS00035;Dbxref=Genbank:WP_012173436.1;Name=WP_012173436.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173436.1;locus_tag=DOLE_RS00035;product=50S ribosomal protein L9;protein_id=WP_012173436.1;transl_table=11 NC_009943.1 RefSeq gene 7957 8940 . - . ID=gene-DOLE_RS00040;Name=DOLE_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00040;old_locus_tag=Dole_0008 NC_009943.1 Protein Homology CDS 7957 8940 . - 0 ID=cds-WP_012173437.1;Parent=gene-DOLE_RS00040;Dbxref=Genbank:WP_012173437.1;Name=WP_012173437.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021506.2;locus_tag=DOLE_RS00040;product=YybS family protein;protein_id=WP_012173437.1;transl_table=11 NC_009943.1 RefSeq gene 8962 9213 . - . ID=gene-DOLE_RS00045;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=DOLE_RS00045;old_locus_tag=Dole_0009 NC_009943.1 Protein Homology CDS 8962 9213 . - 0 ID=cds-WP_012173438.1;Parent=gene-DOLE_RS00045;Dbxref=Genbank:WP_012173438.1;Name=WP_012173438.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173438.1;locus_tag=DOLE_RS00045;product=30S ribosomal protein S18;protein_id=WP_012173438.1;transl_table=11 NC_009943.1 RefSeq gene 9267 9773 . - . ID=gene-DOLE_RS00050;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=DOLE_RS00050;old_locus_tag=Dole_0010 NC_009943.1 Protein Homology CDS 9267 9773 . - 0 ID=cds-WP_012173439.1;Parent=gene-DOLE_RS00050;Dbxref=Genbank:WP_012173439.1;Name=WP_012173439.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00166.1;locus_tag=DOLE_RS00050;product=30S ribosomal protein S6;protein_id=WP_012173439.1;transl_table=11 NC_009943.1 RefSeq gene 10367 11674 . - . ID=gene-DOLE_RS00055;Name=DOLE_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00055;old_locus_tag=Dole_0011 NC_009943.1 GeneMarkS-2+ CDS 10367 11674 . - 0 ID=cds-WP_012173440.1;Parent=gene-DOLE_RS00055;Dbxref=Genbank:WP_012173440.1;Name=WP_012173440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00055;product=hypothetical protein;protein_id=WP_012173440.1;transl_table=11 NC_009943.1 RefSeq gene 11993 13690 . - . ID=gene-DOLE_RS00060;Name=DOLE_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00060;old_locus_tag=Dole_0012 NC_009943.1 GeneMarkS-2+ CDS 11993 13690 . - 0 ID=cds-WP_012173441.1;Parent=gene-DOLE_RS00060;Dbxref=Genbank:WP_012173441.1;Name=WP_012173441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00060;product=VCBS repeat-containing protein;protein_id=WP_012173441.1;transl_table=11 NC_009943.1 RefSeq gene 13760 15190 . - . ID=gene-DOLE_RS00065;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=DOLE_RS00065;old_locus_tag=Dole_0013 NC_009943.1 Protein Homology CDS 13760 15190 . - 0 ID=cds-WP_012173442.1;Parent=gene-DOLE_RS00065;Dbxref=Genbank:WP_012173442.1;Name=WP_012173442.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904987.1;locus_tag=DOLE_RS00065;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_012173442.1;transl_table=11 NC_009943.1 RefSeq gene 15398 16750 . + . ID=gene-DOLE_RS00070;Name=DOLE_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00070;old_locus_tag=Dole_0014 NC_009943.1 Protein Homology CDS 15398 16750 . + 0 ID=cds-WP_012173443.1;Parent=gene-DOLE_RS00070;Dbxref=Genbank:WP_012173443.1;Name=WP_012173443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00765.1;locus_tag=DOLE_RS00070;product=YihY/virulence factor BrkB family protein;protein_id=WP_012173443.1;transl_table=11 NC_009943.1 RefSeq gene 17136 17657 . - . ID=gene-DOLE_RS16865;Name=DOLE_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16865;old_locus_tag=Dole_0015 NC_009943.1 Protein Homology CDS 17136 17657 . - 0 ID=cds-WP_012173444.1;Parent=gene-DOLE_RS16865;Dbxref=Genbank:WP_012173444.1;Name=WP_012173444.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: protein motif:HMM:NF014664.2;locus_tag=DOLE_RS16865;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_012173444.1;transl_table=11 NC_009943.1 RefSeq gene 17995 18588 . - . ID=gene-DOLE_RS00080;Name=DOLE_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00080;old_locus_tag=Dole_0016 NC_009943.1 GeneMarkS-2+ CDS 17995 18588 . - 0 ID=cds-WP_012173445.1;Parent=gene-DOLE_RS00080;Dbxref=Genbank:WP_012173445.1;Name=WP_012173445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00080;product=hypothetical protein;protein_id=WP_012173445.1;transl_table=11 NC_009943.1 RefSeq gene 18772 19362 . - . ID=gene-DOLE_RS16870;Name=DOLE_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16870;old_locus_tag=Dole_0017 NC_009943.1 GeneMarkS-2+ CDS 18772 19362 . - 0 ID=cds-WP_012173446.1;Parent=gene-DOLE_RS16870;Dbxref=Genbank:WP_012173446.1;Name=WP_012173446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16870;product=hypothetical protein;protein_id=WP_012173446.1;transl_table=11 NC_009943.1 RefSeq gene 19366 20346 . - . ID=gene-DOLE_RS00090;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=DOLE_RS00090;old_locus_tag=Dole_0018 NC_009943.1 Protein Homology CDS 19366 20346 . - 0 ID=cds-WP_012173447.1;Parent=gene-DOLE_RS00090;Dbxref=Genbank:WP_012173447.1;Name=WP_012173447.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173447.1;locus_tag=DOLE_RS00090;product=flotillin-like protein FloA;protein_id=WP_012173447.1;transl_table=11 NC_009943.1 RefSeq gene 20373 20849 . - . ID=gene-DOLE_RS00095;Name=DOLE_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00095;old_locus_tag=Dole_0019 NC_009943.1 Protein Homology CDS 20373 20849 . - 0 ID=cds-WP_012173448.1;Parent=gene-DOLE_RS00095;Dbxref=Genbank:WP_012173448.1;Name=WP_012173448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903665.1;locus_tag=DOLE_RS00095;product=NfeD family protein;protein_id=WP_012173448.1;transl_table=11 NC_009943.1 RefSeq gene 20846 22312 . - . ID=gene-DOLE_RS00100;Name=DOLE_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00100;old_locus_tag=Dole_0020 NC_009943.1 Protein Homology CDS 20846 22312 . - 0 ID=cds-WP_012173449.1;Parent=gene-DOLE_RS00100;Dbxref=Genbank:WP_012173449.1;Name=WP_012173449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070508.1;locus_tag=DOLE_RS00100;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_012173449.1;transl_table=11 NC_009943.1 RefSeq gene 22361 23017 . - . ID=gene-DOLE_RS00105;Name=DOLE_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00105;old_locus_tag=Dole_0021 NC_009943.1 Protein Homology CDS 22361 23017 . - 0 ID=cds-WP_012173450.1;Parent=gene-DOLE_RS00105;Dbxref=Genbank:WP_012173450.1;Name=WP_012173450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904964.1;locus_tag=DOLE_RS00105;product=HAD family hydrolase;protein_id=WP_012173450.1;transl_table=11 NC_009943.1 RefSeq gene 23014 23751 . - . ID=gene-DOLE_RS00110;Name=DOLE_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00110;old_locus_tag=Dole_0022 NC_009943.1 Protein Homology CDS 23014 23751 . - 0 ID=cds-WP_268815386.1;Parent=gene-DOLE_RS00110;Dbxref=Genbank:WP_268815386.1;Name=WP_268815386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_268815386.1;locus_tag=DOLE_RS00110;product=OS_HP3 family (seleno)protein;protein_id=WP_268815386.1;transl_except=(pos:complement(23527..23529)%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 23770 24261 . - . ID=gene-DOLE_RS00120;Name=DOLE_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00120;old_locus_tag=Dole_0024 NC_009943.1 Protein Homology CDS 23770 24261 . - 0 ID=cds-WP_012173453.1;Parent=gene-DOLE_RS00120;Dbxref=Genbank:WP_012173453.1;Name=WP_012173453.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948009.1;locus_tag=DOLE_RS00120;product=YfcE family phosphodiesterase;protein_id=WP_012173453.1;transl_table=11 NC_009943.1 RefSeq gene 25106 27145 . - . ID=gene-DOLE_RS00130;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=DOLE_RS00130;old_locus_tag=Dole_0025 NC_009943.1 Protein Homology CDS 25106 27145 . - 0 ID=cds-WP_012173454.1;Parent=gene-DOLE_RS00130;Dbxref=Genbank:WP_012173454.1;Name=WP_012173454.1;Ontology_term=GO:0006260,GO:0003678,GO:0003688,GO:0016818,GO:0005658;gbkey=CDS;gene=priA;go_component=alpha DNA polymerase:primase complex|0005658||IEA;go_function=DNA helicase activity|0003678||IEA,DNA replication origin binding|0003688||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959202.1;locus_tag=DOLE_RS00130;product=primosomal protein N';protein_id=WP_012173454.1;transl_table=11 NC_009943.1 RefSeq gene 27261 28541 . - . ID=gene-DOLE_RS00135;Name=DOLE_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00135;old_locus_tag=Dole_0026 NC_009943.1 Protein Homology CDS 27261 28541 . - 0 ID=cds-WP_012173455.1;Parent=gene-DOLE_RS00135;Dbxref=Genbank:WP_012173455.1;Name=WP_012173455.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877706.1;locus_tag=DOLE_RS00135;product=citrate synthase;protein_id=WP_012173455.1;transl_table=11 NC_009943.1 RefSeq gene 28802 29572 . + . ID=gene-DOLE_RS00140;Name=DOLE_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00140;old_locus_tag=Dole_0027 NC_009943.1 Protein Homology CDS 28802 29572 . + 0 ID=cds-WP_012173456.1;Parent=gene-DOLE_RS00140;Dbxref=Genbank:WP_012173456.1;Name=WP_012173456.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04219.1;locus_tag=DOLE_RS00140;product=TIGR04219 family outer membrane beta-barrel protein;protein_id=WP_012173456.1;transl_table=11 NC_009943.1 RefSeq gene 29612 30250 . + . ID=gene-DOLE_RS00145;Name=DOLE_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00145;old_locus_tag=Dole_0028 NC_009943.1 Protein Homology CDS 29612 30250 . + 0 ID=cds-WP_041280259.1;Parent=gene-DOLE_RS00145;Dbxref=Genbank:WP_041280259.1;Name=WP_041280259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609479.1;locus_tag=DOLE_RS00145;product=MBL fold metallo-hydrolase;protein_id=WP_041280259.1;transl_table=11 NC_009943.1 RefSeq gene 30274 30918 . - . ID=gene-DOLE_RS00150;Name=DOLE_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00150;old_locus_tag=Dole_0029 NC_009943.1 Protein Homology CDS 30274 30918 . - 0 ID=cds-WP_012173458.1;Parent=gene-DOLE_RS00150;Dbxref=Genbank:WP_012173458.1;Name=WP_012173458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586315.1;locus_tag=DOLE_RS00150;product=response regulator transcription factor;protein_id=WP_012173458.1;transl_table=11 NC_009943.1 RefSeq gene 30896 36115 . - . ID=gene-DOLE_RS00155;Name=DOLE_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00155;old_locus_tag=Dole_0030 NC_009943.1 Protein Homology CDS 30896 36115 . - 0 ID=cds-WP_012173459.1;Parent=gene-DOLE_RS00155;Dbxref=Genbank:WP_012173459.1;Name=WP_012173459.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=DOLE_RS00155;product=AAA family ATPase;protein_id=WP_012173459.1;transl_table=11 NC_009943.1 RefSeq gene 36230 37147 . - . ID=gene-DOLE_RS00160;Name=DOLE_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00160;old_locus_tag=Dole_0031 NC_009943.1 Protein Homology CDS 36230 37147 . - 0 ID=cds-WP_012173460.1;Parent=gene-DOLE_RS00160;Dbxref=Genbank:WP_012173460.1;Name=WP_012173460.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014523.2;locus_tag=DOLE_RS00160;product=MlaD family protein;protein_id=WP_012173460.1;transl_table=11 NC_009943.1 RefSeq gene 37152 37814 . - . ID=gene-DOLE_RS00165;Name=DOLE_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00165;old_locus_tag=Dole_0032 NC_009943.1 GeneMarkS-2+ CDS 37152 37814 . - 0 ID=cds-WP_041280260.1;Parent=gene-DOLE_RS00165;Dbxref=Genbank:WP_041280260.1;Name=WP_041280260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00165;product=hypothetical protein;protein_id=WP_041280260.1;transl_table=11 NC_009943.1 RefSeq gene 37857 38633 . - . ID=gene-DOLE_RS00170;Name=DOLE_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00170;old_locus_tag=Dole_0033 NC_009943.1 Protein Homology CDS 37857 38633 . - 0 ID=cds-WP_012173462.1;Parent=gene-DOLE_RS00170;Dbxref=Genbank:WP_012173462.1;Name=WP_012173462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014460.2;locus_tag=DOLE_RS00170;product=ABC transporter permease;protein_id=WP_012173462.1;transl_table=11 NC_009943.1 RefSeq gene 38838 41114 . + . ID=gene-DOLE_RS00175;Name=DOLE_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00175;old_locus_tag=Dole_0034 NC_009943.1 Protein Homology CDS 38838 41114 . + 0 ID=cds-WP_012173463.1;Parent=gene-DOLE_RS00175;Dbxref=Genbank:WP_012173463.1;Name=WP_012173463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017076.2;locus_tag=DOLE_RS00175;product=CHASE2 domain-containing protein;protein_id=WP_012173463.1;transl_table=11 NC_009943.1 RefSeq gene 41134 42708 . + . ID=gene-DOLE_RS16875;Name=DOLE_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16875;old_locus_tag=Dole_0035 NC_009943.1 Protein Homology CDS 41134 42708 . + 0 ID=cds-WP_052294222.1;Parent=gene-DOLE_RS16875;Dbxref=Genbank:WP_052294222.1;Name=WP_052294222.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: protein motif:HMM:TIGR02669.1;locus_tag=DOLE_RS16875;product=SpoIID/LytB domain-containing protein;protein_id=WP_052294222.1;transl_table=11 NC_009943.1 RefSeq gene 42966 43844 . + . ID=gene-DOLE_RS00185;Name=DOLE_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00185;old_locus_tag=Dole_0036 NC_009943.1 Protein Homology CDS 42966 43844 . + 0 ID=cds-WP_012173465.1;Parent=gene-DOLE_RS00185;Dbxref=Genbank:WP_012173465.1;Name=WP_012173465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014248.2;locus_tag=DOLE_RS00185;product=LPP20 family lipoprotein;protein_id=WP_012173465.1;transl_table=11 NC_009943.1 RefSeq gene 43905 45068 . + . ID=gene-DOLE_RS00190;Name=DOLE_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00190;old_locus_tag=Dole_0037 NC_009943.1 Protein Homology CDS 43905 45068 . + 0 ID=cds-WP_012173466.1;Parent=gene-DOLE_RS00190;Dbxref=Genbank:WP_012173466.1;Name=WP_012173466.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024806.2;locus_tag=DOLE_RS00190;product=tetratricopeptide repeat protein;protein_id=WP_012173466.1;transl_table=11 NC_009943.1 RefSeq gene 45095 45967 . + . ID=gene-DOLE_RS00195;Name=DOLE_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00195;old_locus_tag=Dole_0038 NC_009943.1 Protein Homology CDS 45095 45967 . + 0 ID=cds-WP_012173467.1;Parent=gene-DOLE_RS00195;Dbxref=Genbank:WP_012173467.1;Name=WP_012173467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016648.2;locus_tag=DOLE_RS00195;product=FecR family protein;protein_id=WP_012173467.1;transl_table=11 NC_009943.1 RefSeq gene 46138 46875 . + . ID=gene-DOLE_RS00200;Name=DOLE_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00200;old_locus_tag=Dole_0039 NC_009943.1 Protein Homology CDS 46138 46875 . + 0 ID=cds-WP_012173468.1;Parent=gene-DOLE_RS00200;Dbxref=Genbank:WP_012173468.1;Name=WP_012173468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173545.1;locus_tag=DOLE_RS00200;product=nitroreductase family protein;protein_id=WP_012173468.1;transl_table=11 NC_009943.1 RefSeq gene 46877 49003 . + . ID=gene-DOLE_RS00205;Name=DOLE_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00205;old_locus_tag=Dole_0040 NC_009943.1 Protein Homology CDS 46877 49003 . + 0 ID=cds-WP_012173469.1;Parent=gene-DOLE_RS00205;Dbxref=Genbank:WP_012173469.1;Name=WP_012173469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173541.1;locus_tag=DOLE_RS00205;product=AMP-binding protein;protein_id=WP_012173469.1;transl_table=11 NC_009943.1 RefSeq gene 49047 50552 . + . ID=gene-DOLE_RS00210;Name=DOLE_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00210;old_locus_tag=Dole_0041 NC_009943.1 Protein Homology CDS 49047 50552 . + 0 ID=cds-WP_012173470.1;Parent=gene-DOLE_RS00210;Dbxref=Genbank:WP_012173470.1;Name=WP_012173470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176317.1;locus_tag=DOLE_RS00210;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012173470.1;transl_table=11 NC_009943.1 RefSeq gene 50587 51435 . - . ID=gene-DOLE_RS00215;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=DOLE_RS00215;old_locus_tag=Dole_0042 NC_009943.1 Protein Homology CDS 50587 51435 . - 0 ID=cds-WP_041280261.1;Parent=gene-DOLE_RS00215;Dbxref=Genbank:WP_041280261.1;Name=WP_041280261.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070968.1;locus_tag=DOLE_RS00215;product=pantoate--beta-alanine ligase;protein_id=WP_041280261.1;transl_table=11 NC_009943.1 RefSeq gene 51701 54091 . + . ID=gene-DOLE_RS00220;Name=DOLE_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00220;old_locus_tag=Dole_0043 NC_009943.1 Protein Homology CDS 51701 54091 . + 0 ID=cds-WP_012173472.1;Parent=gene-DOLE_RS00220;Dbxref=Genbank:WP_012173472.1;Name=WP_012173472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019912.2;locus_tag=DOLE_RS00220;product=LVIVD repeat-containing protein;protein_id=WP_012173472.1;transl_table=11 NC_009943.1 RefSeq gene 54260 54673 . + . ID=gene-DOLE_RS00225;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=DOLE_RS00225;old_locus_tag=Dole_0044 NC_009943.1 Protein Homology CDS 54260 54673 . + 0 ID=cds-WP_012173473.1;Parent=gene-DOLE_RS00225;Dbxref=Genbank:WP_012173473.1;Name=WP_012173473.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:TIGR00621.2;locus_tag=DOLE_RS00225;product=single-stranded DNA-binding protein;protein_id=WP_012173473.1;transl_table=11 NC_009943.1 RefSeq gene 54839 55024 . - . ID=gene-DOLE_RS00230;Name=DOLE_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00230;old_locus_tag=Dole_0045 NC_009943.1 Protein Homology CDS 54839 55024 . - 0 ID=cds-WP_012173474.1;Parent=gene-DOLE_RS00230;Dbxref=Genbank:WP_012173474.1;Name=WP_012173474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876131.1;locus_tag=DOLE_RS00230;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_012173474.1;transl_table=11 NC_009943.1 RefSeq gene 55182 56252 . + . ID=gene-DOLE_RS00235;Name=DOLE_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00235;old_locus_tag=Dole_0046 NC_009943.1 Protein Homology CDS 55182 56252 . + 0 ID=cds-WP_012173475.1;Parent=gene-DOLE_RS00235;Dbxref=Genbank:WP_012173475.1;Name=WP_012173475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959406.1;locus_tag=DOLE_RS00235;product=hypothetical protein;protein_id=WP_012173475.1;transl_table=11 NC_009943.1 RefSeq gene 56392 57237 . + . ID=gene-DOLE_RS00240;Name=DOLE_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00240;old_locus_tag=Dole_0047 NC_009943.1 Protein Homology CDS 56392 57237 . + 0 ID=cds-WP_012173476.1;Parent=gene-DOLE_RS00240;Dbxref=Genbank:WP_012173476.1;Name=WP_012173476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876128.1;locus_tag=DOLE_RS00240;product=MoxR family ATPase;protein_id=WP_012173476.1;transl_table=11 NC_009943.1 RefSeq gene 57271 58482 . + . ID=gene-DOLE_RS00245;Name=DOLE_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00245;old_locus_tag=Dole_0048 NC_009943.1 Protein Homology CDS 57271 58482 . + 0 ID=cds-WP_012173477.1;Parent=gene-DOLE_RS00245;Dbxref=Genbank:WP_012173477.1;Name=WP_012173477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876127.1;locus_tag=DOLE_RS00245;product=hypothetical protein;protein_id=WP_012173477.1;transl_table=11 NC_009943.1 RefSeq gene 58501 59181 . + . ID=gene-DOLE_RS00250;Name=DOLE_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00250;old_locus_tag=Dole_0049 NC_009943.1 Protein Homology CDS 58501 59181 . + 0 ID=cds-WP_012173478.1;Parent=gene-DOLE_RS00250;Dbxref=Genbank:WP_012173478.1;Name=WP_012173478.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS00250;product=response regulator;protein_id=WP_012173478.1;transl_table=11 NC_009943.1 RefSeq gene 59359 59658 . + . ID=gene-DOLE_RS00255;Name=DOLE_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00255;old_locus_tag=Dole_0050 NC_009943.1 Protein Homology CDS 59359 59658 . + 0 ID=cds-WP_208596984.1;Parent=gene-DOLE_RS00255;Dbxref=Genbank:WP_208596984.1;Name=WP_208596984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586754.1;locus_tag=DOLE_RS00255;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_208596984.1;transl_table=11 NC_009943.1 RefSeq gene 59661 59939 . + . ID=gene-DOLE_RS00260;Name=DOLE_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00260;old_locus_tag=Dole_0051 NC_009943.1 Protein Homology CDS 59661 59939 . + 0 ID=cds-WP_012173480.1;Parent=gene-DOLE_RS00260;Dbxref=Genbank:WP_012173480.1;Name=WP_012173480.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586755.1;locus_tag=DOLE_RS00260;product=putative addiction module antidote protein;protein_id=WP_012173480.1;transl_table=11 NC_009943.1 RefSeq gene 60037 60615 . + . ID=gene-DOLE_RS00265;Name=DOLE_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00265;old_locus_tag=Dole_0052 NC_009943.1 Protein Homology CDS 60037 60615 . + 0 ID=cds-WP_012173481.1;Parent=gene-DOLE_RS00265;Dbxref=Genbank:WP_012173481.1;Name=WP_012173481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021511.2;locus_tag=DOLE_RS00265;product=DUF2238 domain-containing protein;protein_id=WP_012173481.1;transl_table=11 NC_009943.1 RefSeq gene 60975 62369 . - . ID=gene-DOLE_RS00270;Name=DOLE_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00270;old_locus_tag=Dole_0054 NC_009943.1 Protein Homology CDS 60975 62369 . - 0 ID=cds-WP_012173483.1;Parent=gene-DOLE_RS00270;Dbxref=Genbank:WP_012173483.1;Name=WP_012173483.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877512.1;locus_tag=DOLE_RS00270;product=DEAD/DEAH box helicase;protein_id=WP_012173483.1;transl_table=11 NC_009943.1 RefSeq gene 62536 63330 . + . ID=gene-DOLE_RS00275;Name=DOLE_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00275;old_locus_tag=Dole_0055 NC_009943.1 Protein Homology CDS 62536 63330 . + 0 ID=cds-WP_012173484.1;Parent=gene-DOLE_RS00275;Dbxref=Genbank:WP_012173484.1;Name=WP_012173484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949992.1;locus_tag=DOLE_RS00275;product=zinc-dependent peptidase;protein_id=WP_012173484.1;transl_table=11 NC_009943.1 RefSeq gene 63436 63921 . + . ID=gene-DOLE_RS00280;Name=DOLE_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00280;old_locus_tag=Dole_0056 NC_009943.1 GeneMarkS-2+ CDS 63436 63921 . + 0 ID=cds-WP_012173485.1;Parent=gene-DOLE_RS00280;Dbxref=Genbank:WP_012173485.1;Name=WP_012173485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00280;product=hypothetical protein;protein_id=WP_012173485.1;transl_table=11 NC_009943.1 RefSeq gene 64046 65218 . - . ID=gene-DOLE_RS00285;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=DOLE_RS00285;old_locus_tag=Dole_0057 NC_009943.1 Protein Homology CDS 64046 65218 . - 0 ID=cds-WP_012173486.1;Parent=gene-DOLE_RS00285;Dbxref=Genbank:WP_012173486.1;Name=WP_012173486.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173486.1;locus_tag=DOLE_RS00285;product=alanine racemase;protein_id=WP_012173486.1;transl_table=11 NC_009943.1 RefSeq gene 65215 65940 . - . ID=gene-DOLE_RS00290;Name=DOLE_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00290;old_locus_tag=Dole_0058 NC_009943.1 Protein Homology CDS 65215 65940 . - 0 ID=cds-WP_012173487.1;Parent=gene-DOLE_RS00290;Dbxref=Genbank:WP_012173487.1;Name=WP_012173487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073657.1;locus_tag=DOLE_RS00290;product=pseudouridine synthase;protein_id=WP_012173487.1;transl_table=11 NC_009943.1 RefSeq gene 65937 67127 . - . ID=gene-DOLE_RS00295;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=DOLE_RS00295;old_locus_tag=Dole_0059 NC_009943.1 Protein Homology CDS 65937 67127 . - 0 ID=cds-WP_232362718.1;Parent=gene-DOLE_RS00295;Dbxref=Genbank:WP_232362718.1;Name=WP_232362718.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=glutamate N-acetyltransferase activity|0004358||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877105.1;locus_tag=DOLE_RS00295;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_232362718.1;transl_table=11 NC_009943.1 RefSeq gene 67250 67978 . - . ID=gene-DOLE_RS00300;Name=DOLE_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00300;old_locus_tag=Dole_0060 NC_009943.1 Protein Homology CDS 67250 67978 . - 0 ID=cds-WP_012173489.1;Parent=gene-DOLE_RS00300;Dbxref=Genbank:WP_012173489.1;Name=WP_012173489.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014961.2;locus_tag=DOLE_RS00300;product=vitamin B12 dependent methionine synthase activation region;protein_id=WP_012173489.1;transl_table=11 NC_009943.1 RefSeq gene 67985 68638 . - . ID=gene-DOLE_RS00305;Name=DOLE_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00305;old_locus_tag=Dole_0061 NC_009943.1 Protein Homology CDS 67985 68638 . - 0 ID=cds-WP_012173490.1;Parent=gene-DOLE_RS00305;Dbxref=Genbank:WP_012173490.1;Name=WP_012173490.1;Note=Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself%2C in one of its several forms%2C or in some unusual lineages%2C dependence on a cobalamin-like analog.;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014375.2;locus_tag=DOLE_RS00305;product=cobalamin-dependent protein;protein_id=WP_012173490.1;transl_table=11 NC_009943.1 RefSeq gene 68641 69801 . - . ID=gene-DOLE_RS00310;Name=DOLE_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00310;old_locus_tag=Dole_0062 NC_009943.1 Protein Homology CDS 68641 69801 . - 0 ID=cds-WP_012173491.1;Parent=gene-DOLE_RS00310;Dbxref=Genbank:WP_012173491.1;Name=WP_012173491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948925.1;locus_tag=DOLE_RS00310;product=uroporphyrinogen decarboxylase family protein;protein_id=WP_012173491.1;transl_table=11 NC_009943.1 RefSeq gene 69963 71192 . + . ID=gene-DOLE_RS00315;Name=DOLE_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00315;old_locus_tag=Dole_0063 NC_009943.1 Protein Homology CDS 69963 71192 . + 0 ID=cds-WP_012173492.1;Parent=gene-DOLE_RS00315;Dbxref=Genbank:WP_012173492.1;Name=WP_012173492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015418.2;locus_tag=DOLE_RS00315;product=molybdopterin molybdotransferase MoeA;protein_id=WP_012173492.1;transl_table=11 NC_009943.1 RefSeq gene 72123 72590 . + . ID=gene-DOLE_RS00320;Name=DOLE_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00320;old_locus_tag=Dole_0064 NC_009943.1 GeneMarkS-2+ CDS 72123 72590 . + 0 ID=cds-WP_012173493.1;Parent=gene-DOLE_RS00320;Dbxref=Genbank:WP_012173493.1;Name=WP_012173493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00320;product=hypothetical protein;protein_id=WP_012173493.1;transl_table=11 NC_009943.1 RefSeq gene 72623 73765 . - . ID=gene-DOLE_RS18095;Name=DOLE_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18095;old_locus_tag=Dole_0065 NC_009943.1 GeneMarkS-2+ CDS 72623 73765 . - 0 ID=cds-WP_012173494.1;Parent=gene-DOLE_RS18095;Dbxref=Genbank:WP_012173494.1;Name=WP_012173494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18095;product=hypothetical protein;protein_id=WP_012173494.1;transl_table=11 NC_009943.1 RefSeq gene 73762 74181 . - . ID=gene-DOLE_RS00330;Name=DOLE_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00330;old_locus_tag=Dole_0066 NC_009943.1 GeneMarkS-2+ CDS 73762 74181 . - 0 ID=cds-WP_153304320.1;Parent=gene-DOLE_RS00330;Dbxref=Genbank:WP_153304320.1;Name=WP_153304320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00330;product=hypothetical protein;protein_id=WP_153304320.1;transl_table=11 NC_009943.1 RefSeq gene 75364 75825 . - . ID=gene-DOLE_RS00335;Name=DOLE_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00335;old_locus_tag=Dole_0067 NC_009943.1 Protein Homology CDS 75364 75825 . - 0 ID=cds-WP_012173496.1;Parent=gene-DOLE_RS00335;Dbxref=Genbank:WP_012173496.1;Name=WP_012173496.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012257.2;locus_tag=DOLE_RS00335;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_012173496.1;transl_table=11 NC_009943.1 RefSeq gene 75864 77306 . - . ID=gene-DOLE_RS00340;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=DOLE_RS00340;old_locus_tag=Dole_0068 NC_009943.1 Protein Homology CDS 75864 77306 . - 0 ID=cds-WP_012173497.1;Parent=gene-DOLE_RS00340;Dbxref=Genbank:WP_012173497.1;Name=WP_012173497.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR02432.1;locus_tag=DOLE_RS00340;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_012173497.1;transl_table=11 NC_009943.1 RefSeq gene 77403 77501 . + . ID=gene-DOLE_RS17755;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=DOLE_RS17755;old_locus_tag=Dole_R0001 NC_009943.1 cmsearch SRP_RNA 77403 77501 . + . ID=rna-DOLE_RS17755;Parent=gene-DOLE_RS17755;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS17755;product=signal recognition particle sRNA small type NC_009943.1 cmsearch exon 77403 77501 . + . ID=exon-DOLE_RS17755-1;Parent=rna-DOLE_RS17755;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS17755;product=signal recognition particle sRNA small type NC_009943.1 RefSeq gene 77706 78359 . + . ID=gene-DOLE_RS00345;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=DOLE_RS00345;old_locus_tag=Dole_0069 NC_009943.1 Protein Homology CDS 77706 78359 . + 0 ID=cds-WP_012173498.1;Parent=gene-DOLE_RS00345;Dbxref=Genbank:WP_012173498.1;Name=WP_012173498.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:NF010748.0;locus_tag=DOLE_RS00345;product=nucleotide exchange factor GrpE;protein_id=WP_012173498.1;transl_table=11 NC_009943.1 RefSeq gene 78419 80347 . + . ID=gene-DOLE_RS00350;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=DOLE_RS00350;old_locus_tag=Dole_0070 NC_009943.1 Protein Homology CDS 78419 80347 . + 0 ID=cds-WP_012173499.1;Parent=gene-DOLE_RS00350;Dbxref=Genbank:WP_012173499.1;Name=WP_012173499.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173499.1;locus_tag=DOLE_RS00350;product=molecular chaperone DnaK;protein_id=WP_012173499.1;transl_table=11 NC_009943.1 RefSeq gene 80417 80896 . + . ID=gene-DOLE_RS00355;Name=DOLE_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00355;old_locus_tag=Dole_0071 NC_009943.1 Protein Homology CDS 80417 80896 . + 0 ID=cds-WP_012173500.1;Parent=gene-DOLE_RS00355;Dbxref=Genbank:WP_012173500.1;Name=WP_012173500.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958943.1;locus_tag=DOLE_RS00355;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_012173500.1;transl_table=11 NC_009943.1 RefSeq gene 80934 81476 . - . ID=gene-DOLE_RS00360;Name=DOLE_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00360;old_locus_tag=Dole_0072 NC_009943.1 Protein Homology CDS 80934 81476 . - 0 ID=cds-WP_041280265.1;Parent=gene-DOLE_RS00360;Dbxref=Genbank:WP_041280265.1;Name=WP_041280265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174564.1;locus_tag=DOLE_RS00360;product=hypothetical protein;protein_id=WP_041280265.1;transl_table=11 NC_009943.1 RefSeq gene 81514 82383 . - . ID=gene-DOLE_RS00365;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=DOLE_RS00365;old_locus_tag=Dole_0073 NC_009943.1 Protein Homology CDS 81514 82383 . - 0 ID=cds-WP_012173502.1;Parent=gene-DOLE_RS00365;Dbxref=Genbank:WP_012173502.1;Name=WP_012173502.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905085.1;locus_tag=DOLE_RS00365;product=succinate--CoA ligase subunit alpha;protein_id=WP_012173502.1;transl_table=11 NC_009943.1 RefSeq gene 82431 83597 . - . ID=gene-DOLE_RS00370;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=DOLE_RS00370;old_locus_tag=Dole_0074 NC_009943.1 Protein Homology CDS 82431 83597 . - 0 ID=cds-WP_012173503.1;Parent=gene-DOLE_RS00370;Dbxref=Genbank:WP_012173503.1;Name=WP_012173503.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173503.1;locus_tag=DOLE_RS00370;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_012173503.1;transl_table=11 NC_009943.1 RefSeq gene 83597 85642 . - . ID=gene-DOLE_RS00375;Name=DOLE_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00375;old_locus_tag=Dole_0075 NC_009943.1 Protein Homology CDS 83597 85642 . - 0 ID=cds-WP_012173504.1;Parent=gene-DOLE_RS00375;Dbxref=Genbank:WP_012173504.1;Name=WP_012173504.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876067.1;locus_tag=DOLE_RS00375;product=pyruvate carboxylase subunit B;protein_id=WP_012173504.1;transl_table=11 NC_009943.1 RefSeq gene 85681 85911 . - . ID=gene-DOLE_RS00380;Name=DOLE_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00380;old_locus_tag=Dole_0076 NC_009943.1 GeneMarkS-2+ CDS 85681 85911 . - 0 ID=cds-WP_012173505.1;Parent=gene-DOLE_RS00380;Dbxref=Genbank:WP_012173505.1;Name=WP_012173505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00380;product=hypothetical protein;protein_id=WP_012173505.1;transl_table=11 NC_009943.1 RefSeq gene 85930 87483 . - . ID=gene-DOLE_RS00385;Name=DOLE_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00385;old_locus_tag=Dole_0077 NC_009943.1 Protein Homology CDS 85930 87483 . - 0 ID=cds-WP_012173506.1;Parent=gene-DOLE_RS00385;Dbxref=Genbank:WP_012173506.1;Name=WP_012173506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587085.1;locus_tag=DOLE_RS00385;product=methylmalonyl-CoA carboxyltransferase;protein_id=WP_012173506.1;transl_table=11 NC_009943.1 RefSeq gene 87606 88601 . - . ID=gene-DOLE_RS00390;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=DOLE_RS00390;old_locus_tag=Dole_0078 NC_009943.1 Protein Homology CDS 87606 88601 . - 0 ID=cds-WP_012173507.1;Parent=gene-DOLE_RS00390;Dbxref=Genbank:WP_012173507.1;Name=WP_012173507.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956001.1;locus_tag=DOLE_RS00390;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_012173507.1;transl_table=11 NC_009943.1 RefSeq gene 88777 90897 . - . ID=gene-DOLE_RS00395;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=DOLE_RS00395;old_locus_tag=Dole_0079 NC_009943.1 Protein Homology CDS 88777 90897 . - 0 ID=cds-WP_012173508.1;Parent=gene-DOLE_RS00395;Dbxref=Genbank:WP_012173508.1;Name=WP_012173508.1;Ontology_term=GO:0004494,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956000.1;locus_tag=DOLE_RS00395;product=methylmalonyl-CoA mutase;protein_id=WP_012173508.1;transl_table=11 NC_009943.1 RefSeq gene 90941 91348 . - . ID=gene-DOLE_RS00400;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=DOLE_RS00400;old_locus_tag=Dole_0080 NC_009943.1 Protein Homology CDS 90941 91348 . - 0 ID=cds-WP_012173509.1;Parent=gene-DOLE_RS00400;Dbxref=Genbank:WP_012173509.1;Name=WP_012173509.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876062.1;locus_tag=DOLE_RS00400;product=methylmalonyl-CoA epimerase;protein_id=WP_012173509.1;transl_table=11 NC_009943.1 RefSeq gene 91385 92572 . - . ID=gene-DOLE_RS00405;Name=DOLE_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00405;old_locus_tag=Dole_0081 NC_009943.1 Protein Homology CDS 91385 92572 . - 0 ID=cds-WP_012173510.1;Parent=gene-DOLE_RS00405;Dbxref=Genbank:WP_012173510.1;Name=WP_012173510.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875346.1;locus_tag=DOLE_RS00405;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_012173510.1;transl_table=11 NC_009943.1 RefSeq gene 92860 93045 . + . ID=gene-DOLE_RS00410;Name=DOLE_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00410;old_locus_tag=Dole_0082 NC_009943.1 Protein Homology CDS 92860 93045 . + 0 ID=cds-WP_012173511.1;Parent=gene-DOLE_RS00410;Dbxref=Genbank:WP_012173511.1;Name=WP_012173511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609819.1;locus_tag=DOLE_RS00410;product=DUF2065 domain-containing protein;protein_id=WP_012173511.1;transl_table=11 NC_009943.1 RefSeq gene 93215 94264 . + . ID=gene-DOLE_RS00415;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=DOLE_RS00415;old_locus_tag=Dole_0083 NC_009943.1 Protein Homology CDS 93215 94264 . + 0 ID=cds-WP_012173512.1;Parent=gene-DOLE_RS00415;Dbxref=Genbank:WP_012173512.1;Name=WP_012173512.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074275.1;locus_tag=DOLE_RS00415;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_012173512.1;transl_table=11 NC_009943.1 RefSeq gene 94358 95512 . + . ID=gene-DOLE_RS00420;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=DOLE_RS00420;old_locus_tag=Dole_0084 NC_009943.1 Protein Homology CDS 94358 95512 . + 0 ID=cds-WP_012173513.1;Parent=gene-DOLE_RS00420;Dbxref=Genbank:WP_012173513.1;Name=WP_012173513.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173513.1;locus_tag=DOLE_RS00420;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_012173513.1;transl_table=11 NC_009943.1 RefSeq gene 95607 95825 . + . ID=gene-DOLE_RS00425;Name=DOLE_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00425;old_locus_tag=Dole_0085 NC_009943.1 Protein Homology CDS 95607 95825 . + 0 ID=cds-WP_012173514.1;Parent=gene-DOLE_RS00425;Dbxref=Genbank:WP_012173514.1;Name=WP_012173514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013821630.1;locus_tag=DOLE_RS00425;product=NifU family protein;protein_id=WP_012173514.1;transl_table=11 NC_009943.1 RefSeq gene 95992 96306 . + . ID=gene-DOLE_RS00430;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=DOLE_RS00430;old_locus_tag=Dole_0086 NC_009943.1 Protein Homology CDS 95992 96306 . + 0 ID=cds-WP_012173515.1;Parent=gene-DOLE_RS00430;Dbxref=Genbank:WP_012173515.1;Name=WP_012173515.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173515.1;locus_tag=DOLE_RS00430;product=50S ribosomal protein L21;protein_id=WP_012173515.1;transl_table=11 NC_009943.1 RefSeq gene 96368 96619 . + . ID=gene-DOLE_RS00435;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=DOLE_RS00435;old_locus_tag=Dole_0087 NC_009943.1 Protein Homology CDS 96368 96619 . + 0 ID=cds-WP_012173516.1;Parent=gene-DOLE_RS00435;Dbxref=Genbank:WP_012173516.1;Name=WP_012173516.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173516.1;locus_tag=DOLE_RS00435;product=50S ribosomal protein L27;protein_id=WP_012173516.1;transl_table=11 NC_009943.1 RefSeq gene 96616 97617 . + . ID=gene-DOLE_RS00440;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=DOLE_RS00440;old_locus_tag=Dole_0088 NC_009943.1 Protein Homology CDS 96616 97617 . + 0 ID=cds-WP_012173517.1;Parent=gene-DOLE_RS00440;Dbxref=Genbank:WP_012173517.1;Name=WP_012173517.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173517.1;locus_tag=DOLE_RS00440;product=GTPase ObgE;protein_id=WP_012173517.1;transl_table=11 NC_009943.1 RefSeq gene 97607 98737 . + . ID=gene-DOLE_RS00445;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=DOLE_RS00445;old_locus_tag=Dole_0089 NC_009943.1 Protein Homology CDS 97607 98737 . + 0 ID=cds-WP_012173518.1;Parent=gene-DOLE_RS00445;Dbxref=Genbank:WP_012173518.1;Name=WP_012173518.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163383.1;locus_tag=DOLE_RS00445;product=glutamate 5-kinase;protein_id=WP_012173518.1;transl_table=11 NC_009943.1 RefSeq gene 98775 100031 . + . ID=gene-DOLE_RS00450;Name=DOLE_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00450;old_locus_tag=Dole_0090 NC_009943.1 Protein Homology CDS 98775 100031 . + 0 ID=cds-WP_012173519.1;Parent=gene-DOLE_RS00450;Dbxref=Genbank:WP_012173519.1;Name=WP_012173519.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173519.1;locus_tag=DOLE_RS00450;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_012173519.1;transl_table=11 NC_009943.1 RefSeq gene 100059 100727 . + . ID=gene-DOLE_RS00455;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=DOLE_RS00455;old_locus_tag=Dole_0091 NC_009943.1 Protein Homology CDS 100059 100727 . + 0 ID=cds-WP_012173520.1;Parent=gene-DOLE_RS00455;Dbxref=Genbank:WP_012173520.1;Name=WP_012173520.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: protein motif:HMM:NF000840.1;locus_tag=DOLE_RS00455;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_012173520.1;transl_table=11 NC_009943.1 RefSeq gene 100724 101068 . + . ID=gene-DOLE_RS00460;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=DOLE_RS00460;old_locus_tag=Dole_0092 NC_009943.1 Protein Homology CDS 100724 101068 . + 0 ID=cds-WP_012173521.1;Parent=gene-DOLE_RS00460;Dbxref=Genbank:WP_012173521.1;Name=WP_012173521.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074458.1;locus_tag=DOLE_RS00460;product=ribosome silencing factor;protein_id=WP_012173521.1;transl_table=11 NC_009943.1 RefSeq gene 101094 102629 . + . ID=gene-DOLE_RS00465;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=DOLE_RS00465;old_locus_tag=Dole_0093 NC_009943.1 Protein Homology CDS 101094 102629 . + 0 ID=cds-WP_012173522.1;Parent=gene-DOLE_RS00465;Dbxref=Genbank:WP_012173522.1;Name=WP_012173522.1;Ontology_term=GO:0006096,GO:0046537;gbkey=CDS;gene=gpmI;go_function=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase activity|0046537||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013162878.1;locus_tag=DOLE_RS00465;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_012173522.1;transl_table=11 NC_009943.1 RefSeq gene 103072 104205 . + . ID=gene-DOLE_RS00470;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=DOLE_RS00470;old_locus_tag=Dole_0094 NC_009943.1 Protein Homology CDS 103072 104205 . + 0 ID=cds-WP_012173523.1;Parent=gene-DOLE_RS00470;Dbxref=Genbank:WP_012173523.1;Name=WP_012173523.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR00663.1;locus_tag=DOLE_RS00470;product=DNA polymerase III subunit beta;protein_id=WP_012173523.1;transl_table=11 NC_009943.1 RefSeq gene 104210 106654 . + . ID=gene-DOLE_RS00475;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=DOLE_RS00475;old_locus_tag=Dole_0095 NC_009943.1 Protein Homology CDS 104210 106654 . + 0 ID=cds-WP_012173524.1;Parent=gene-DOLE_RS00475;Dbxref=Genbank:WP_012173524.1;Name=WP_012173524.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014955530.1;locus_tag=DOLE_RS00475;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_012173524.1;transl_table=11 NC_009943.1 RefSeq gene 106651 107988 . - . ID=gene-DOLE_RS00480;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=DOLE_RS00480;old_locus_tag=Dole_0096 NC_009943.1 Protein Homology CDS 106651 107988 . - 0 ID=cds-WP_012173525.1;Parent=gene-DOLE_RS00480;Dbxref=Genbank:WP_012173525.1;Name=WP_012173525.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959435.1;locus_tag=DOLE_RS00480;product=asparagine--tRNA ligase;protein_id=WP_012173525.1;transl_table=11 NC_009943.1 RefSeq gene 108032 110485 . + . ID=gene-DOLE_RS00485;Name=DOLE_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00485;old_locus_tag=Dole_0097 NC_009943.1 Protein Homology CDS 108032 110485 . + 0 ID=cds-WP_012173526.1;Parent=gene-DOLE_RS00485;Dbxref=Genbank:WP_012173526.1;Name=WP_012173526.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: protein motif:HMM:TIGR03960.1;locus_tag=DOLE_RS00485;product=TIGR03960 family B12-binding radical SAM protein;protein_id=WP_012173526.1;transl_table=11 NC_009943.1 RefSeq gene 110601 112142 . + . ID=gene-DOLE_RS00490;Name=DOLE_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00490;old_locus_tag=Dole_0098 NC_009943.1 Protein Homology CDS 110601 112142 . + 0 ID=cds-WP_041280266.1;Parent=gene-DOLE_RS00490;Dbxref=Genbank:WP_041280266.1;Name=WP_041280266.1;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878357.1;locus_tag=DOLE_RS00490;product=Rne/Rng family ribonuclease;protein_id=WP_041280266.1;transl_table=11 NC_009943.1 RefSeq gene 112349 112483 . + . ID=gene-DOLE_RS17770;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=DOLE_RS17770;old_locus_tag=Dole_0099 NC_009943.1 Protein Homology CDS 112349 112483 . + 0 ID=cds-WP_012173528.1;Parent=gene-DOLE_RS17770;Dbxref=Genbank:WP_012173528.1;Name=WP_012173528.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831329.1;locus_tag=DOLE_RS17770;product=50S ribosomal protein L34;protein_id=WP_012173528.1;transl_table=11 NC_009943.1 RefSeq gene 112621 112986 . + . ID=gene-DOLE_RS00495;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=DOLE_RS00495;old_locus_tag=Dole_0100 NC_009943.1 Protein Homology CDS 112621 112986 . + 0 ID=cds-WP_012173529.1;Parent=gene-DOLE_RS00495;Dbxref=Genbank:WP_012173529.1;Name=WP_012173529.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:TIGR00188.1;locus_tag=DOLE_RS00495;product=ribonuclease P protein component;protein_id=WP_012173529.1;transl_table=11 NC_009943.1 RefSeq gene 112986 113180 . + . ID=gene-DOLE_RS00500;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=DOLE_RS00500;old_locus_tag=Dole_0101 NC_009943.1 Protein Homology CDS 112986 113180 . + 0 ID=cds-WP_012173530.1;Parent=gene-DOLE_RS00500;Dbxref=Genbank:WP_012173530.1;Name=WP_012173530.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070713.1;locus_tag=DOLE_RS00500;product=membrane protein insertion efficiency factor YidD;protein_id=WP_012173530.1;transl_table=11 NC_009943.1 RefSeq gene 113359 115038 . + . ID=gene-DOLE_RS00505;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=DOLE_RS00505;old_locus_tag=Dole_0102 NC_009943.1 Protein Homology CDS 113359 115038 . + 0 ID=cds-WP_012173531.1;Parent=gene-DOLE_RS00505;Dbxref=Genbank:WP_012173531.1;Name=WP_012173531.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878359.1;locus_tag=DOLE_RS00505;product=membrane protein insertase YidC;protein_id=WP_012173531.1;transl_table=11 NC_009943.1 RefSeq gene 115053 116078 . + . ID=gene-DOLE_RS00510;Name=DOLE_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00510;old_locus_tag=Dole_0103 NC_009943.1 Protein Homology CDS 115053 116078 . + 0 ID=cds-WP_012173532.1;Parent=gene-DOLE_RS00510;Dbxref=Genbank:WP_012173532.1;Name=WP_012173532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024483.2;locus_tag=DOLE_RS00510;product=protein jag;protein_id=WP_012173532.1;transl_table=11 NC_009943.1 RefSeq gene 116099 117487 . + . ID=gene-DOLE_RS00515;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=DOLE_RS00515;old_locus_tag=Dole_0104 NC_009943.1 Protein Homology CDS 116099 117487 . + 0 ID=cds-WP_012173533.1;Parent=gene-DOLE_RS00515;Dbxref=Genbank:WP_012173533.1;Name=WP_012173533.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR00450.1;locus_tag=DOLE_RS00515;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_012173533.1;transl_table=11 NC_009943.1 RefSeq gene 117620 118303 . + . ID=gene-DOLE_RS00520;Name=DOLE_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00520;old_locus_tag=Dole_0105 NC_009943.1 Protein Homology CDS 117620 118303 . + 0 ID=cds-WP_012173534.1;Parent=gene-DOLE_RS00520;Dbxref=Genbank:WP_012173534.1;Name=WP_012173534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878362.1;locus_tag=DOLE_RS00520;product=YkgJ family cysteine cluster protein;protein_id=WP_012173534.1;transl_table=11 NC_009943.1 RefSeq gene 118300 118668 . + . ID=gene-DOLE_RS00525;Name=DOLE_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00525;old_locus_tag=Dole_0106 NC_009943.1 Protein Homology CDS 118300 118668 . + 0 ID=cds-WP_012173535.1;Parent=gene-DOLE_RS00525;Dbxref=Genbank:WP_012173535.1;Name=WP_012173535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663025.1;locus_tag=DOLE_RS00525;product=hypothetical protein;protein_id=WP_012173535.1;transl_table=11 NC_009943.1 RefSeq gene 118655 119527 . + . ID=gene-DOLE_RS16880;Name=DOLE_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16880;old_locus_tag=Dole_0107 NC_009943.1 Protein Homology CDS 118655 119527 . + 0 ID=cds-WP_012173536.1;Parent=gene-DOLE_RS16880;Dbxref=Genbank:WP_012173536.1;Name=WP_012173536.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018076.2;locus_tag=DOLE_RS16880;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_012173536.1;transl_table=11 NC_009943.1 RefSeq gene 119524 120198 . + . ID=gene-DOLE_RS00535;Name=DOLE_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00535;old_locus_tag=Dole_0108 NC_009943.1 Protein Homology CDS 119524 120198 . + 0 ID=cds-WP_012173537.1;Parent=gene-DOLE_RS00535;Dbxref=Genbank:WP_012173537.1;Name=WP_012173537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948861.1;locus_tag=DOLE_RS00535;product=zinc ribbon domain-containing protein;protein_id=WP_012173537.1;transl_table=11 NC_009943.1 RefSeq gene 120309 121034 . - . ID=gene-DOLE_RS00540;Name=DOLE_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00540;old_locus_tag=Dole_0109 NC_009943.1 Protein Homology CDS 120309 121034 . - 0 ID=cds-WP_012173538.1;Parent=gene-DOLE_RS00540;Dbxref=Genbank:WP_012173538.1;Name=WP_012173538.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021230.2;locus_tag=DOLE_RS00540;product=hypothetical protein;protein_id=WP_012173538.1;transl_table=11 NC_009943.1 RefSeq gene 121442 121936 . + . ID=gene-DOLE_RS00545;Name=DOLE_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00545;old_locus_tag=Dole_0110 NC_009943.1 Protein Homology CDS 121442 121936 . + 0 ID=cds-WP_012173539.1;Parent=gene-DOLE_RS00545;Dbxref=Genbank:WP_012173539.1;Name=WP_012173539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071930.1;locus_tag=DOLE_RS00545;product=DUF3124 domain-containing protein;protein_id=WP_012173539.1;transl_table=11 NC_009943.1 RefSeq gene 121952 122761 . + . ID=gene-DOLE_RS00550;Name=DOLE_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00550;old_locus_tag=Dole_0111 NC_009943.1 Protein Homology CDS 121952 122761 . + 0 ID=cds-WP_012173540.1;Parent=gene-DOLE_RS00550;Dbxref=Genbank:WP_012173540.1;Name=WP_012173540.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014686.2;locus_tag=DOLE_RS00550;product=ATP-grasp domain-containing protein;protein_id=WP_012173540.1;transl_table=11 NC_009943.1 RefSeq gene 122992 124710 . - . ID=gene-DOLE_RS00555;Name=DOLE_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00555;old_locus_tag=Dole_0112 NC_009943.1 Protein Homology CDS 122992 124710 . - 0 ID=cds-WP_012173541.1;Parent=gene-DOLE_RS00555;Dbxref=Genbank:WP_012173541.1;Name=WP_012173541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948570.1;locus_tag=DOLE_RS00555;product=AMP-binding protein;protein_id=WP_012173541.1;transl_table=11 NC_009943.1 RefSeq gene 124751 126148 . - . ID=gene-DOLE_RS00560;Name=DOLE_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00560;old_locus_tag=Dole_0113 NC_009943.1 Protein Homology CDS 124751 126148 . - 0 ID=cds-WP_012173542.1;Parent=gene-DOLE_RS00560;Dbxref=Genbank:WP_012173542.1;Name=WP_012173542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948569.1;locus_tag=DOLE_RS00560;product=thiolase family protein;protein_id=WP_012173542.1;transl_table=11 NC_009943.1 RefSeq gene 126600 127382 . + . ID=gene-DOLE_RS00565;Name=DOLE_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00565;old_locus_tag=Dole_0114 NC_009943.1 Protein Homology CDS 126600 127382 . + 0 ID=cds-WP_012173543.1;Parent=gene-DOLE_RS00565;Dbxref=Genbank:WP_012173543.1;Name=WP_012173543.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012610.2;locus_tag=DOLE_RS00565;product=GntR family transcriptional regulator;protein_id=WP_012173543.1;transl_table=11 NC_009943.1 RefSeq gene 127402 128238 . + . ID=gene-DOLE_RS00570;Name=DOLE_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00570;old_locus_tag=Dole_0115 NC_009943.1 Protein Homology CDS 127402 128238 . + 0 ID=cds-WP_012173544.1;Parent=gene-DOLE_RS00570;Dbxref=Genbank:WP_012173544.1;Name=WP_012173544.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609357.1;locus_tag=DOLE_RS00570;product=SDR family oxidoreductase;protein_id=WP_012173544.1;transl_table=11 NC_009943.1 RefSeq gene 128291 129049 . + . ID=gene-DOLE_RS00575;Name=DOLE_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00575;old_locus_tag=Dole_0116 NC_009943.1 Protein Homology CDS 128291 129049 . + 0 ID=cds-WP_012173545.1;Parent=gene-DOLE_RS00575;Dbxref=Genbank:WP_012173545.1;Name=WP_012173545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948567.1;locus_tag=DOLE_RS00575;product=nitroreductase family protein;protein_id=WP_012173545.1;transl_table=11 NC_009943.1 RefSeq gene 129053 129430 . + . ID=gene-DOLE_RS00580;Name=DOLE_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00580;old_locus_tag=Dole_0117 NC_009943.1 Protein Homology CDS 129053 129430 . + 0 ID=cds-WP_012173546.1;Parent=gene-DOLE_RS00580;Dbxref=Genbank:WP_012173546.1;Name=WP_012173546.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012267.2;locus_tag=DOLE_RS00580;product=4Fe-4S binding protein;protein_id=WP_012173546.1;transl_table=11 NC_009943.1 RefSeq gene 129618 130499 . + . ID=gene-DOLE_RS00585;Name=DOLE_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00585;old_locus_tag=Dole_0118 NC_009943.1 GeneMarkS-2+ CDS 129618 130499 . + 0 ID=cds-WP_012173547.1;Parent=gene-DOLE_RS00585;Dbxref=Genbank:WP_012173547.1;Name=WP_012173547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00585;product=hypothetical protein;protein_id=WP_012173547.1;transl_table=11 NC_009943.1 RefSeq gene 130561 131370 . + . ID=gene-DOLE_RS16885;Name=DOLE_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16885;old_locus_tag=Dole_0119 NC_009943.1 GeneMarkS-2+ CDS 130561 131370 . + 0 ID=cds-WP_012173548.1;Parent=gene-DOLE_RS16885;Dbxref=Genbank:WP_012173548.1;Name=WP_012173548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16885;product=GCN5-like N-acetyltransferase;protein_id=WP_012173548.1;transl_table=11 NC_009943.1 RefSeq gene 131723 132865 . + . ID=gene-DOLE_RS00595;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=DOLE_RS00595;old_locus_tag=Dole_0120 NC_009943.1 Protein Homology CDS 131723 132865 . + 0 ID=cds-WP_012173549.1;Parent=gene-DOLE_RS00595;Dbxref=Genbank:WP_012173549.1;Name=WP_012173549.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589161.1;locus_tag=DOLE_RS00595;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_012173549.1;transl_table=11 NC_009943.1 RefSeq gene 132858 136085 . + . ID=gene-DOLE_RS00600;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=DOLE_RS00600;old_locus_tag=Dole_0121 NC_009943.1 Protein Homology CDS 132858 136085 . + 0 ID=cds-WP_012173550.1;Parent=gene-DOLE_RS00600;Dbxref=Genbank:WP_012173550.1;Name=WP_012173550.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589160.1;locus_tag=DOLE_RS00600;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_012173550.1;transl_table=11 NC_009943.1 RefSeq gene 136082 137485 . + . ID=gene-DOLE_RS00605;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=DOLE_RS00605;old_locus_tag=Dole_0122 NC_009943.1 Protein Homology CDS 136082 137485 . + 0 ID=cds-WP_012173551.1;Parent=gene-DOLE_RS00605;Dbxref=Genbank:WP_012173551.1;Name=WP_012173551.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948227.1;locus_tag=DOLE_RS00605;product=amidophosphoribosyltransferase;protein_id=WP_012173551.1;transl_table=11 NC_009943.1 RefSeq gene 137939 138916 . - . ID=gene-DOLE_RS00610;Name=DOLE_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00610;old_locus_tag=Dole_0123 NC_009943.1 Protein Homology CDS 137939 138916 . - 0 ID=cds-WP_012173552.1;Parent=gene-DOLE_RS00610;Dbxref=Genbank:WP_012173552.1;Name=WP_012173552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024634.2;locus_tag=DOLE_RS00610;product=4Fe-4S binding protein;protein_id=WP_012173552.1;transl_table=11 NC_009943.1 RefSeq gene 139017 139448 . - . ID=gene-DOLE_RS00615;Name=DOLE_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00615;old_locus_tag=Dole_0124 NC_009943.1 Protein Homology CDS 139017 139448 . - 0 ID=cds-WP_153304321.1;Parent=gene-DOLE_RS00615;Dbxref=Genbank:WP_153304321.1;Name=WP_153304321.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024212.2;locus_tag=DOLE_RS00615;product=MarR family transcriptional regulator;protein_id=WP_153304321.1;transl_table=11 NC_009943.1 RefSeq gene 139798 140736 . + . ID=gene-DOLE_RS00620;Name=DOLE_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00620;old_locus_tag=Dole_0125 NC_009943.1 Protein Homology CDS 139798 140736 . + 0 ID=cds-WP_041280269.1;Parent=gene-DOLE_RS00620;Dbxref=Genbank:WP_041280269.1;Name=WP_041280269.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723849.1;locus_tag=DOLE_RS00620;product=methyltransferase domain-containing protein;protein_id=WP_041280269.1;transl_table=11 NC_009943.1 RefSeq gene 140761 142818 . + . ID=gene-DOLE_RS00625;Name=DOLE_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00625;old_locus_tag=Dole_0126 NC_009943.1 Protein Homology CDS 140761 142818 . + 0 ID=cds-WP_012173555.1;Parent=gene-DOLE_RS00625;Dbxref=Genbank:WP_012173555.1;Name=WP_012173555.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723850.1;locus_tag=DOLE_RS00625;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012173555.1;transl_table=11 NC_009943.1 RefSeq gene 143082 143309 . + . ID=gene-DOLE_RS18650;Name=DOLE_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18650 NC_009943.1 Protein Homology CDS 143082 143309 . + 0 ID=cds-WP_269719158.1;Parent=gene-DOLE_RS18650;Dbxref=Genbank:WP_269719158.1;Name=WP_269719158.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025088.2;locus_tag=DOLE_RS18650;product=DUF4160 domain-containing protein;protein_id=WP_269719158.1;transl_table=11 NC_009943.1 RefSeq gene 143290 143562 . + . ID=gene-DOLE_RS00630;Name=DOLE_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00630;old_locus_tag=Dole_0127 NC_009943.1 Protein Homology CDS 143290 143562 . + 0 ID=cds-WP_012173556.1;Parent=gene-DOLE_RS00630;Dbxref=Genbank:WP_012173556.1;Name=WP_012173556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956352.1;locus_tag=DOLE_RS00630;product=DUF2442 domain-containing protein;protein_id=WP_012173556.1;transl_table=11 NC_009943.1 RefSeq gene 143604 144326 . + . ID=gene-DOLE_RS00635;Name=DOLE_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00635;old_locus_tag=Dole_0128 NC_009943.1 Protein Homology CDS 143604 144326 . + 0 ID=cds-WP_012173557.1;Parent=gene-DOLE_RS00635;Dbxref=Genbank:WP_012173557.1;Name=WP_012173557.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013702.2;locus_tag=DOLE_RS00635;product=lysophospholipid acyltransferase family protein;protein_id=WP_012173557.1;transl_table=11 NC_009943.1 RefSeq gene 144424 145266 . + . ID=gene-DOLE_RS00640;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=DOLE_RS00640;old_locus_tag=Dole_0129 NC_009943.1 Protein Homology CDS 144424 145266 . + 0 ID=cds-WP_012173558.1;Parent=gene-DOLE_RS00640;Dbxref=Genbank:WP_012173558.1;Name=WP_012173558.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877878.1;locus_tag=DOLE_RS00640;product=pyrroline-5-carboxylate reductase;protein_id=WP_012173558.1;transl_table=11 NC_009943.1 RefSeq gene 145259 145945 . + . ID=gene-DOLE_RS00645;Name=DOLE_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00645;old_locus_tag=Dole_0130 NC_009943.1 Protein Homology CDS 145259 145945 . + 0 ID=cds-WP_012173559.1;Parent=gene-DOLE_RS00645;Dbxref=Genbank:WP_012173559.1;Name=WP_012173559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906009.1;locus_tag=DOLE_RS00645;product=cytochrome C biogenesis protein CcdA;protein_id=WP_012173559.1;transl_table=11 NC_009943.1 RefSeq gene 146077 146526 . + . ID=gene-DOLE_RS00650;Name=DOLE_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00650;old_locus_tag=Dole_0131 NC_009943.1 Protein Homology CDS 146077 146526 . + 0 ID=cds-WP_012173560.1;Parent=gene-DOLE_RS00650;Dbxref=Genbank:WP_012173560.1;Name=WP_012173560.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=DOLE_RS00650;product=DUF255 domain-containing protein;protein_id=WP_012173560.1;transl_table=11 NC_009943.1 RefSeq gene 146529 147116 . + . ID=gene-DOLE_RS00655;Name=DOLE_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00655;old_locus_tag=Dole_0132 NC_009943.1 Protein Homology CDS 146529 147116 . + 0 ID=cds-WP_012173561.1;Parent=gene-DOLE_RS00655;Dbxref=Genbank:WP_012173561.1;Name=WP_012173561.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071008.1;locus_tag=DOLE_RS00655;product=NUDIX domain-containing protein;protein_id=WP_012173561.1;transl_table=11 NC_009943.1 RefSeq gene 147111 147398 . - . ID=gene-DOLE_RS16890;Name=DOLE_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16890;old_locus_tag=Dole_0133 NC_009943.1 GeneMarkS-2+ CDS 147111 147398 . - 0 ID=cds-WP_012173562.1;Parent=gene-DOLE_RS16890;Dbxref=Genbank:WP_012173562.1;Name=WP_012173562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16890;product=hypothetical protein;protein_id=WP_012173562.1;transl_table=11 NC_009943.1 RefSeq gene 147419 147877 . - . ID=gene-DOLE_RS00660;Name=DOLE_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00660;old_locus_tag=Dole_0134 NC_009943.1 Protein Homology CDS 147419 147877 . - 0 ID=cds-WP_012173563.1;Parent=gene-DOLE_RS00660;Dbxref=Genbank:WP_012173563.1;Name=WP_012173563.1;Ontology_term=GO:0006526,GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609758.1;locus_tag=DOLE_RS00660;product=N-acetyltransferase;protein_id=WP_012173563.1;transl_table=11 NC_009943.1 RefSeq gene 148111 150051 . - . ID=gene-DOLE_RS00665;Name=DOLE_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00665;old_locus_tag=Dole_0135 NC_009943.1 Protein Homology CDS 148111 150051 . - 0 ID=cds-WP_012173564.1;Parent=gene-DOLE_RS00665;Dbxref=Genbank:WP_012173564.1;Name=WP_012173564.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: protein motif:HMM:TIGR02074.1;locus_tag=DOLE_RS00665;product=PBP1A family penicillin-binding protein;protein_id=WP_012173564.1;transl_table=11 NC_009943.1 RefSeq gene 150159 150455 . + . ID=gene-DOLE_RS00670;Name=DOLE_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00670;old_locus_tag=Dole_0136 NC_009943.1 GeneMarkS-2+ CDS 150159 150455 . + 0 ID=cds-WP_012173565.1;Parent=gene-DOLE_RS00670;Dbxref=Genbank:WP_012173565.1;Name=WP_012173565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00670;product=hypothetical protein;protein_id=WP_012173565.1;transl_table=11 NC_009943.1 RefSeq gene 150600 151301 . + . ID=gene-DOLE_RS00675;Name=DOLE_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00675;old_locus_tag=Dole_0137 NC_009943.1 Protein Homology CDS 150600 151301 . + 0 ID=cds-WP_041280688.1;Parent=gene-DOLE_RS00675;Dbxref=Genbank:WP_041280688.1;Name=WP_041280688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904058.1;locus_tag=DOLE_RS00675;product=acetate--CoA ligase family protein;protein_id=WP_041280688.1;transl_table=11 NC_009943.1 RefSeq gene 151327 152805 . + . ID=gene-DOLE_RS00680;Name=DOLE_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00680;old_locus_tag=Dole_0138 NC_009943.1 Protein Homology CDS 151327 152805 . + 0 ID=cds-WP_012173567.1;Parent=gene-DOLE_RS00680;Dbxref=Genbank:WP_012173567.1;Name=WP_012173567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904057.1;locus_tag=DOLE_RS00680;product=CoA-binding protein;protein_id=WP_012173567.1;transl_table=11 NC_009943.1 RefSeq gene 152951 153283 . + . ID=gene-DOLE_RS00685;Name=DOLE_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00685;old_locus_tag=Dole_0139 NC_009943.1 Protein Homology CDS 152951 153283 . + 0 ID=cds-WP_012173568.1;Parent=gene-DOLE_RS00685;Dbxref=Genbank:WP_012173568.1;Name=WP_012173568.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF013767.2;locus_tag=DOLE_RS00685;product=Hpt domain-containing protein;protein_id=WP_012173568.1;transl_table=11 NC_009943.1 RefSeq gene 153335 154450 . + . ID=gene-DOLE_RS00690;Name=DOLE_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00690;old_locus_tag=Dole_0140 NC_009943.1 Protein Homology CDS 153335 154450 . + 0 ID=cds-WP_012173569.1;Parent=gene-DOLE_RS00690;Dbxref=Genbank:WP_012173569.1;Name=WP_012173569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662621.1;locus_tag=DOLE_RS00690;product=fused response regulator/phosphatase;protein_id=WP_012173569.1;transl_table=11 NC_009943.1 RefSeq gene 154594 155076 . + . ID=gene-DOLE_RS00695;Name=DOLE_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00695;old_locus_tag=Dole_0141 NC_009943.1 Protein Homology CDS 154594 155076 . + 0 ID=cds-WP_012173570.1;Parent=gene-DOLE_RS00695;Dbxref=Genbank:WP_012173570.1;Name=WP_012173570.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024970.2;locus_tag=DOLE_RS00695;product=ATP-binding protein;protein_id=WP_012173570.1;transl_table=11 NC_009943.1 RefSeq gene 155249 156262 . + . ID=gene-DOLE_RS00700;Name=DOLE_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00700;old_locus_tag=Dole_0142 NC_009943.1 Protein Homology CDS 155249 156262 . + 0 ID=cds-WP_012173571.1;Parent=gene-DOLE_RS00700;Dbxref=Genbank:WP_012173571.1;Name=WP_012173571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878173.1;locus_tag=DOLE_RS00700;product=DUF933 domain-containing protein;protein_id=WP_012173571.1;transl_table=11 NC_009943.1 RefSeq gene 156282 157124 . + . ID=gene-DOLE_RS00705;Name=DOLE_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00705;old_locus_tag=Dole_0143 NC_009943.1 Protein Homology CDS 156282 157124 . + 0 ID=cds-WP_012173572.1;Parent=gene-DOLE_RS00705;Dbxref=Genbank:WP_012173572.1;Name=WP_012173572.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015902991.1;locus_tag=DOLE_RS00705;product=amidohydrolase family protein;protein_id=WP_012173572.1;transl_table=11 NC_009943.1 RefSeq gene 157358 158896 . - . ID=gene-DOLE_RS00710;Name=DOLE_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00710;old_locus_tag=Dole_0144 NC_009943.1 GeneMarkS-2+ CDS 157358 158896 . - 0 ID=cds-WP_012173573.1;Parent=gene-DOLE_RS00710;Dbxref=Genbank:WP_012173573.1;Name=WP_012173573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00710;product=alpha/beta hydrolase;protein_id=WP_012173573.1;transl_table=11 NC_009943.1 RefSeq gene 159138 159731 . - . ID=gene-DOLE_RS00715;Name=DOLE_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00715;old_locus_tag=Dole_0145 NC_009943.1 GeneMarkS-2+ CDS 159138 159731 . - 0 ID=cds-WP_012173574.1;Parent=gene-DOLE_RS00715;Dbxref=Genbank:WP_012173574.1;Name=WP_012173574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00715;product=methyltransferase;protein_id=WP_012173574.1;transl_table=11 NC_009943.1 RefSeq gene 159793 160650 . - . ID=gene-DOLE_RS00720;Name=DOLE_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00720;old_locus_tag=Dole_0146 NC_009943.1 GeneMarkS-2+ CDS 159793 160650 . - 0 ID=cds-WP_012173575.1;Parent=gene-DOLE_RS00720;Dbxref=Genbank:WP_012173575.1;Name=WP_012173575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00720;product=hypothetical protein;protein_id=WP_012173575.1;transl_table=11 NC_009943.1 RefSeq gene 160802 161182 . - . ID=gene-DOLE_RS00725;Name=DOLE_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00725;old_locus_tag=Dole_0147 NC_009943.1 GeneMarkS-2+ CDS 160802 161182 . - 0 ID=cds-WP_041280270.1;Parent=gene-DOLE_RS00725;Dbxref=Genbank:WP_041280270.1;Name=WP_041280270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00725;product=hypothetical protein;protein_id=WP_041280270.1;transl_table=11 NC_009943.1 RefSeq gene 161253 162740 . - . ID=gene-DOLE_RS00730;Name=DOLE_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00730;old_locus_tag=Dole_0148 NC_009943.1 Protein Homology CDS 161253 162740 . - 0 ID=cds-WP_012173577.1;Parent=gene-DOLE_RS00730;Dbxref=Genbank:WP_012173577.1;Name=WP_012173577.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013961.2;locus_tag=DOLE_RS00730;product=transglutaminase family protein;protein_id=WP_012173577.1;transl_table=11 NC_009943.1 RefSeq gene 162933 164750 . - . ID=gene-DOLE_RS00735;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=DOLE_RS00735;old_locus_tag=Dole_0149 NC_009943.1 Protein Homology CDS 162933 164750 . - 0 ID=cds-WP_012173578.1;Parent=gene-DOLE_RS00735;Dbxref=Genbank:WP_012173578.1;Name=WP_012173578.1;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074221.1;locus_tag=DOLE_RS00735;product=DNA mismatch repair endonuclease MutL;protein_id=WP_012173578.1;transl_table=11 NC_009943.1 RefSeq gene 164810 164998 . - . ID=gene-DOLE_RS00740;Name=DOLE_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00740;old_locus_tag=Dole_0150 NC_009943.1 Protein Homology CDS 164810 164998 . - 0 ID=cds-WP_012173579.1;Parent=gene-DOLE_RS00740;Dbxref=Genbank:WP_012173579.1;Name=WP_012173579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967123.1;locus_tag=DOLE_RS00740;product=hypothetical protein;protein_id=WP_012173579.1;transl_table=11 NC_009943.1 RefSeq gene 165014 166474 . - . ID=gene-DOLE_RS00745;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=DOLE_RS00745;old_locus_tag=Dole_0151 NC_009943.1 Protein Homology CDS 165014 166474 . - 0 ID=cds-WP_012173580.1;Parent=gene-DOLE_RS00745;Dbxref=Genbank:WP_012173580.1;Name=WP_012173580.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173580.1;locus_tag=DOLE_RS00745;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_012173580.1;transl_table=11 NC_009943.1 RefSeq gene 166507 166794 . - . ID=gene-DOLE_RS00750;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=DOLE_RS00750;old_locus_tag=Dole_0152 NC_009943.1 Protein Homology CDS 166507 166794 . - 0 ID=cds-WP_012173581.1;Parent=gene-DOLE_RS00750;Dbxref=Genbank:WP_012173581.1;Name=WP_012173581.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173581.1;locus_tag=DOLE_RS00750;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_012173581.1;transl_table=11 NC_009943.1 RefSeq gene 166953 168641 . + . ID=gene-DOLE_RS00755;Name=DOLE_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00755;old_locus_tag=Dole_0153 NC_009943.1 Protein Homology CDS 166953 168641 . + 0 ID=cds-WP_012173582.1;Parent=gene-DOLE_RS00755;Dbxref=Genbank:WP_012173582.1;Name=WP_012173582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947647.1;locus_tag=DOLE_RS00755;product=hypothetical protein;protein_id=WP_012173582.1;transl_table=11 NC_009943.1 RefSeq gene 168653 169213 . - . ID=gene-DOLE_RS00760;Name=DOLE_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00760;old_locus_tag=Dole_0154 NC_009943.1 GeneMarkS-2+ CDS 168653 169213 . - 0 ID=cds-WP_012173583.1;Parent=gene-DOLE_RS00760;Dbxref=Genbank:WP_012173583.1;Name=WP_012173583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00760;product=hypothetical protein;protein_id=WP_012173583.1;transl_table=11 NC_009943.1 RefSeq gene 169341 169433 . - . ID=gene-DOLE_RS00765;Name=DOLE_RS00765;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS00765;old_locus_tag=Dole_R0002 NC_009943.1 tRNAscan-SE tRNA 169341 169433 . - . ID=rna-DOLE_RS00765;Parent=gene-DOLE_RS00765;anticodon=(pos:complement(169396..169398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS00765;product=tRNA-Ser NC_009943.1 tRNAscan-SE exon 169341 169433 . - . ID=exon-DOLE_RS00765-1;Parent=rna-DOLE_RS00765;anticodon=(pos:complement(169396..169398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS00765;product=tRNA-Ser NC_009943.1 RefSeq gene 169445 169530 . - . ID=gene-DOLE_RS00770;Name=DOLE_RS00770;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS00770;old_locus_tag=Dole_R0003 NC_009943.1 tRNAscan-SE tRNA 169445 169530 . - . ID=rna-DOLE_RS00770;Parent=gene-DOLE_RS00770;anticodon=(pos:complement(169494..169496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS00770;product=tRNA-Ser NC_009943.1 tRNAscan-SE exon 169445 169530 . - . ID=exon-DOLE_RS00770-1;Parent=rna-DOLE_RS00770;anticodon=(pos:complement(169494..169496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS00770;product=tRNA-Ser NC_009943.1 RefSeq gene 169729 172134 . + . ID=gene-DOLE_RS00775;Name=DOLE_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00775;old_locus_tag=Dole_0155 NC_009943.1 Protein Homology CDS 169729 172134 . + 0 ID=cds-WP_012173584.1;Parent=gene-DOLE_RS00775;Dbxref=Genbank:WP_012173584.1;Name=WP_012173584.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071450.1;locus_tag=DOLE_RS00775;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_012173584.1;transl_table=11 NC_009943.1 RefSeq gene 172147 173331 . + . ID=gene-DOLE_RS00780;Name=DOLE_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00780;old_locus_tag=Dole_0156 NC_009943.1 Protein Homology CDS 172147 173331 . + 0 ID=cds-WP_012173585.1;Parent=gene-DOLE_RS00780;Dbxref=Genbank:WP_012173585.1;Name=WP_012173585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948405.1;locus_tag=DOLE_RS00780;product=thiolase family protein;protein_id=WP_012173585.1;transl_table=11 NC_009943.1 RefSeq gene 173580 174560 . + . ID=gene-DOLE_RS00785;Name=DOLE_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00785;old_locus_tag=Dole_0157 NC_009943.1 Protein Homology CDS 173580 174560 . + 0 ID=cds-WP_012173586.1;Parent=gene-DOLE_RS00785;Dbxref=Genbank:WP_012173586.1;Name=WP_012173586.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017206.2;locus_tag=DOLE_RS00785;product=NAD(P)H-binding protein;protein_id=WP_012173586.1;transl_table=11 NC_009943.1 RefSeq gene 174557 175009 . + . ID=gene-DOLE_RS00790;Name=DOLE_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00790;old_locus_tag=Dole_0158 NC_009943.1 Protein Homology CDS 174557 175009 . + 0 ID=cds-WP_012173587.1;Parent=gene-DOLE_RS00790;Dbxref=Genbank:WP_012173587.1;Name=WP_012173587.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022072.2;locus_tag=DOLE_RS00790;product=SRPBCC family protein;protein_id=WP_012173587.1;transl_table=11 NC_009943.1 RefSeq gene 175179 175652 . + . ID=gene-DOLE_RS00795;Name=DOLE_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00795;old_locus_tag=Dole_0159 NC_009943.1 Protein Homology CDS 175179 175652 . + 0 ID=cds-WP_012173588.1;Parent=gene-DOLE_RS00795;Dbxref=Genbank:WP_012173588.1;Name=WP_012173588.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012791.2;locus_tag=DOLE_RS00795;product=universal stress protein;protein_id=WP_012173588.1;transl_table=11 NC_009943.1 RefSeq gene 175844 176248 . + . ID=gene-DOLE_RS00800;Name=DOLE_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00800;old_locus_tag=Dole_0160 NC_009943.1 Protein Homology CDS 175844 176248 . + 0 ID=cds-WP_012173589.1;Parent=gene-DOLE_RS00800;Dbxref=Genbank:WP_012173589.1;Name=WP_012173589.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012791.2;locus_tag=DOLE_RS00800;product=universal stress protein;protein_id=WP_012173589.1;transl_table=11 NC_009943.1 RefSeq gene 176276 177982 . - . ID=gene-DOLE_RS00805;Name=DOLE_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00805;old_locus_tag=Dole_0161 NC_009943.1 Protein Homology CDS 176276 177982 . - 0 ID=cds-WP_012173590.1;Parent=gene-DOLE_RS00805;Dbxref=Genbank:WP_012173590.1;Name=WP_012173590.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875215.1;locus_tag=DOLE_RS00805;product=NAD-binding protein;protein_id=WP_012173590.1;transl_table=11 NC_009943.1 RefSeq gene 178188 179702 . + . ID=gene-DOLE_RS00810;Name=DOLE_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00810;old_locus_tag=Dole_0162 NC_009943.1 Protein Homology CDS 178188 179702 . + 0 ID=cds-WP_167320824.1;Parent=gene-DOLE_RS00810;Dbxref=Genbank:WP_167320824.1;Name=WP_167320824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024994.2;locus_tag=DOLE_RS00810;product=CoA-binding protein;protein_id=WP_167320824.1;transl_table=11 NC_009943.1 RefSeq gene 179699 181978 . + . ID=gene-DOLE_RS00815;Name=DOLE_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00815;old_locus_tag=Dole_0163 NC_009943.1 Protein Homology CDS 179699 181978 . + 0 ID=cds-WP_012173592.1;Parent=gene-DOLE_RS00815;Dbxref=Genbank:WP_012173592.1;Name=WP_012173592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609949.1;locus_tag=DOLE_RS00815;product=Tex family protein;protein_id=WP_012173592.1;transl_table=11 NC_009943.1 RefSeq gene 182182 184158 . + . ID=gene-DOLE_RS00820;Name=DOLE_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00820;old_locus_tag=Dole_0164 NC_009943.1 Protein Homology CDS 182182 184158 . + 0 ID=cds-WP_012173593.1;Parent=gene-DOLE_RS00820;Dbxref=Genbank:WP_012173593.1;Name=WP_012173593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965005.1;locus_tag=DOLE_RS00820;product=AMP-binding protein;protein_id=WP_012173593.1;transl_table=11 NC_009943.1 RefSeq gene 184295 184627 . + . ID=gene-DOLE_RS00825;Name=DOLE_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00825;old_locus_tag=Dole_0165 NC_009943.1 Protein Homology CDS 184295 184627 . + 0 ID=cds-WP_012173594.1;Parent=gene-DOLE_RS00825;Dbxref=Genbank:WP_012173594.1;Name=WP_012173594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016854.2;locus_tag=DOLE_RS00825;product=TfoX/Sxy family protein;protein_id=WP_012173594.1;transl_table=11 NC_009943.1 RefSeq gene 184693 186132 . + . ID=gene-DOLE_RS00830;Name=DOLE_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00830;old_locus_tag=Dole_0166 NC_009943.1 Protein Homology CDS 184693 186132 . + 0 ID=cds-WP_012173595.1;Parent=gene-DOLE_RS00830;Dbxref=Genbank:WP_012173595.1;Name=WP_012173595.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF005899.0;locus_tag=DOLE_RS00830;product=amidase;protein_id=WP_012173595.1;transl_table=11 NC_009943.1 RefSeq gene 186392 187033 . - . ID=gene-DOLE_RS16895;Name=DOLE_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16895;old_locus_tag=Dole_0167 NC_009943.1 Protein Homology CDS 186392 187033 . - 0 ID=cds-WP_012173596.1;Parent=gene-DOLE_RS16895;Dbxref=Genbank:WP_012173596.1;Name=WP_012173596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036520.2;locus_tag=DOLE_RS16895;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012173596.1;transl_table=11 NC_009943.1 RefSeq gene 187230 188261 . + . ID=gene-DOLE_RS16900;Name=DOLE_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16900;old_locus_tag=Dole_0168 NC_009943.1 Protein Homology CDS 187230 188261 . + 0 ID=cds-WP_012173597.1;Parent=gene-DOLE_RS16900;Dbxref=Genbank:WP_012173597.1;Name=WP_012173597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175062.1;locus_tag=DOLE_RS16900;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012173597.1;transl_table=11 NC_009943.1 RefSeq gene 188285 189154 . + . ID=gene-DOLE_RS00850;Name=DOLE_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00850;old_locus_tag=Dole_0169 NC_009943.1 Protein Homology CDS 188285 189154 . + 0 ID=cds-WP_012173598.1;Parent=gene-DOLE_RS00850;Dbxref=Genbank:WP_012173598.1;Name=WP_012173598.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020227.2;locus_tag=DOLE_RS00850;product=SDR family oxidoreductase;protein_id=WP_012173598.1;transl_table=11 NC_009943.1 RefSeq gene 189216 189542 . + . ID=gene-DOLE_RS00855;Name=DOLE_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00855;old_locus_tag=Dole_0170 NC_009943.1 GeneMarkS-2+ CDS 189216 189542 . + 0 ID=cds-WP_012173599.1;Parent=gene-DOLE_RS00855;Dbxref=Genbank:WP_012173599.1;Name=WP_012173599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00855;product=DNA-binding protein;protein_id=WP_012173599.1;transl_table=11 NC_009943.1 RefSeq gene 189575 191494 . - . ID=gene-DOLE_RS00860;Name=DOLE_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00860;old_locus_tag=Dole_0171 NC_009943.1 Protein Homology CDS 189575 191494 . - 0 ID=cds-WP_012173600.1;Parent=gene-DOLE_RS00860;Dbxref=Genbank:WP_012173600.1;Name=WP_012173600.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875231.1;locus_tag=DOLE_RS00860;product=ATP-binding cassette domain-containing protein;protein_id=WP_012173600.1;transl_table=11 NC_009943.1 RefSeq gene 191515 192492 . - . ID=gene-DOLE_RS00865;Name=DOLE_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00865;old_locus_tag=Dole_0172 NC_009943.1 Protein Homology CDS 191515 192492 . - 0 ID=cds-WP_012173601.1;Parent=gene-DOLE_RS00865;Dbxref=Genbank:WP_012173601.1;Name=WP_012173601.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024109.2;locus_tag=DOLE_RS00865;product=alpha/beta fold hydrolase;protein_id=WP_012173601.1;transl_table=11 NC_009943.1 RefSeq gene 192500 193378 . - . ID=gene-DOLE_RS00870;Name=DOLE_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00870;old_locus_tag=Dole_0173 NC_009943.1 Protein Homology CDS 192500 193378 . - 0 ID=cds-WP_012173602.1;Parent=gene-DOLE_RS00870;Dbxref=Genbank:WP_012173602.1;Name=WP_012173602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS00870;product=radical SAM protein;protein_id=WP_012173602.1;transl_table=11 NC_009943.1 RefSeq gene 193732 194274 . + . ID=gene-DOLE_RS00875;Name=DOLE_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00875;old_locus_tag=Dole_0174 NC_009943.1 Protein Homology CDS 193732 194274 . + 0 ID=cds-WP_012173603.1;Parent=gene-DOLE_RS00875;Dbxref=Genbank:WP_012173603.1;Name=WP_012173603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012611153.1;locus_tag=DOLE_RS00875;product=peptidylprolyl isomerase;protein_id=WP_012173603.1;transl_table=11 NC_009943.1 RefSeq gene 194367 195065 . - . ID=gene-DOLE_RS00880;Name=DOLE_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00880;old_locus_tag=Dole_0175 NC_009943.1 Protein Homology CDS 194367 195065 . - 0 ID=cds-WP_012173604.1;Parent=gene-DOLE_RS00880;Dbxref=Genbank:WP_012173604.1;Name=WP_012173604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS00880;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012173604.1;transl_table=11 NC_009943.1 RefSeq gene 195263 196111 . + . ID=gene-DOLE_RS00885;Name=DOLE_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00885;old_locus_tag=Dole_0176 NC_009943.1 Protein Homology CDS 195263 196111 . + 0 ID=cds-WP_012173605.1;Parent=gene-DOLE_RS00885;Dbxref=Genbank:WP_012173605.1;Name=WP_012173605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024875.2;locus_tag=DOLE_RS00885;product=4Fe-4S binding protein;protein_id=WP_012173605.1;transl_table=11 NC_009943.1 RefSeq gene 196133 197182 . + . ID=gene-DOLE_RS00890;Name=DOLE_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00890;old_locus_tag=Dole_0177 NC_009943.1 GeneMarkS-2+ CDS 196133 197182 . + 0 ID=cds-WP_012173606.1;Parent=gene-DOLE_RS00890;Dbxref=Genbank:WP_012173606.1;Name=WP_012173606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00890;product=4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein;protein_id=WP_012173606.1;transl_table=11 NC_009943.1 RefSeq gene 197194 198024 . + . ID=gene-DOLE_RS00895;Name=DOLE_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00895;old_locus_tag=Dole_0178 NC_009943.1 Protein Homology CDS 197194 198024 . + 0 ID=cds-WP_012173607.1;Parent=gene-DOLE_RS00895;Dbxref=Genbank:WP_012173607.1;Name=WP_012173607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947792.1;locus_tag=DOLE_RS00895;product=DUF169 domain-containing protein;protein_id=WP_012173607.1;transl_table=11 NC_009943.1 RefSeq gene 198054 198575 . + . ID=gene-DOLE_RS00900;Name=DOLE_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00900;old_locus_tag=Dole_0179 NC_009943.1 Protein Homology CDS 198054 198575 . + 0 ID=cds-WP_012173608.1;Parent=gene-DOLE_RS00900;Dbxref=Genbank:WP_012173608.1;Name=WP_012173608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949953.1;locus_tag=DOLE_RS00900;product=C-GCAxxG-C-C family protein;protein_id=WP_012173608.1;transl_table=11 NC_009943.1 RefSeq gene 198631 199026 . + . ID=gene-DOLE_RS00905;Name=DOLE_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00905;old_locus_tag=Dole_0180 NC_009943.1 Protein Homology CDS 198631 199026 . + 0 ID=cds-WP_012173609.1;Parent=gene-DOLE_RS00905;Dbxref=Genbank:WP_012173609.1;Name=WP_012173609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013228.2;locus_tag=DOLE_RS00905;product=RidA family protein;protein_id=WP_012173609.1;transl_table=11 NC_009943.1 RefSeq gene 199141 200208 . + . ID=gene-DOLE_RS00910;Name=DOLE_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00910;old_locus_tag=Dole_0181 NC_009943.1 Protein Homology CDS 199141 200208 . + 0 ID=cds-WP_012173610.1;Parent=gene-DOLE_RS00910;Dbxref=Genbank:WP_012173610.1;Name=WP_012173610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947793.1;locus_tag=DOLE_RS00910;product=4Fe-4S binding protein;protein_id=WP_012173610.1;transl_table=11 NC_009943.1 RefSeq gene 200269 201270 . + . ID=gene-DOLE_RS00915;Name=DOLE_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00915;old_locus_tag=Dole_0182 NC_009943.1 Protein Homology CDS 200269 201270 . + 0 ID=cds-WP_153304322.1;Parent=gene-DOLE_RS00915;Dbxref=Genbank:WP_153304322.1;Name=WP_153304322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610875.1;locus_tag=DOLE_RS00915;product=epoxyqueuosine reductase;protein_id=WP_153304322.1;transl_table=11 NC_009943.1 RefSeq gene 201532 202692 . + . ID=gene-DOLE_RS00920;Name=DOLE_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00920;old_locus_tag=Dole_0183 NC_009943.1 Protein Homology CDS 201532 202692 . + 0 ID=cds-WP_012173612.1;Parent=gene-DOLE_RS00920;Dbxref=Genbank:WP_012173612.1;Name=WP_012173612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024247.2;locus_tag=DOLE_RS00920;product=4Fe-4S binding protein;protein_id=WP_012173612.1;transl_table=11 NC_009943.1 RefSeq gene 202839 203846 . + . ID=gene-DOLE_RS16905;Name=DOLE_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16905;old_locus_tag=Dole_0184 NC_009943.1 Protein Homology CDS 202839 203846 . + 0 ID=cds-WP_012173613.1;Parent=gene-DOLE_RS16905;Dbxref=Genbank:WP_012173613.1;Name=WP_012173613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS16905;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012173613.1;transl_table=11 NC_009943.1 RefSeq gene 203920 204675 . + . ID=gene-DOLE_RS00930;Name=DOLE_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00930;old_locus_tag=Dole_0185 NC_009943.1 Protein Homology CDS 203920 204675 . + 0 ID=cds-WP_012173614.1;Parent=gene-DOLE_RS00930;Dbxref=Genbank:WP_012173614.1;Name=WP_012173614.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015949.2;locus_tag=DOLE_RS00930;product=DUF364 domain-containing protein;protein_id=WP_012173614.1;transl_table=11 NC_009943.1 RefSeq gene 204860 205612 . - . ID=gene-DOLE_RS16910;Name=DOLE_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16910;old_locus_tag=Dole_0186 NC_009943.1 Protein Homology CDS 204860 205612 . - 0 ID=cds-WP_012173615.1;Parent=gene-DOLE_RS16910;Dbxref=Genbank:WP_012173615.1;Name=WP_012173615.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=DOLE_RS16910;product=MerR family transcriptional regulator;protein_id=WP_012173615.1;transl_table=11 NC_009943.1 RefSeq gene 205948 206940 . + . ID=gene-DOLE_RS00940;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=DOLE_RS00940;old_locus_tag=Dole_0187 NC_009943.1 Protein Homology CDS 205948 206940 . + 0 ID=cds-WP_012173616.1;Parent=gene-DOLE_RS00940;Dbxref=Genbank:WP_012173616.1;Name=WP_012173616.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: protein motif:HMM:TIGR02666.1;locus_tag=DOLE_RS00940;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_012173616.1;transl_table=11 NC_009943.1 RefSeq gene 207128 207331 . + . ID=gene-DOLE_RS00945;Name=DOLE_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00945;old_locus_tag=Dole_0188 NC_009943.1 Protein Homology CDS 207128 207331 . + 0 ID=cds-WP_012173617.1;Parent=gene-DOLE_RS00945;Dbxref=Genbank:WP_012173617.1;Name=WP_012173617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402314.1;locus_tag=DOLE_RS00945;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_012173617.1;transl_table=11 NC_009943.1 RefSeq gene 207371 208126 . - . ID=gene-DOLE_RS00950;Name=DOLE_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00950;old_locus_tag=Dole_0189 NC_009943.1 Protein Homology CDS 207371 208126 . - 0 ID=cds-WP_012173618.1;Parent=gene-DOLE_RS00950;Dbxref=Genbank:WP_012173618.1;Name=WP_012173618.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=DOLE_RS00950;product=MerR family transcriptional regulator;protein_id=WP_012173618.1;transl_table=11 NC_009943.1 RefSeq gene 208138 208707 . - . ID=gene-DOLE_RS00955;Name=DOLE_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00955;old_locus_tag=Dole_0190 NC_009943.1 Protein Homology CDS 208138 208707 . - 0 ID=cds-WP_012173619.1;Parent=gene-DOLE_RS00955;Dbxref=Genbank:WP_012173619.1;Name=WP_012173619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014693.2;locus_tag=DOLE_RS00955;product=FmdE family protein;protein_id=WP_012173619.1;transl_table=11 NC_009943.1 RefSeq gene 208961 209368 . + . ID=gene-DOLE_RS00960;Name=DOLE_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00960;old_locus_tag=Dole_0191 NC_009943.1 GeneMarkS-2+ CDS 208961 209368 . + 0 ID=cds-WP_012173620.1;Parent=gene-DOLE_RS00960;Dbxref=Genbank:WP_012173620.1;Name=WP_012173620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS00960;product=hypothetical protein;protein_id=WP_012173620.1;transl_table=11 NC_009943.1 RefSeq gene 209441 210022 . + . ID=gene-DOLE_RS16915;Name=DOLE_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16915;old_locus_tag=Dole_0192 NC_009943.1 Protein Homology CDS 209441 210022 . + 0 ID=cds-WP_012173621.1;Parent=gene-DOLE_RS16915;Dbxref=Genbank:WP_012173621.1;Name=WP_012173621.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: protein motif:HMM:NF012575.2;locus_tag=DOLE_RS16915;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_012173621.1;transl_table=11 NC_009943.1 RefSeq gene 210022 210387 . + . ID=gene-DOLE_RS00970;Name=DOLE_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00970;old_locus_tag=Dole_0193 NC_009943.1 Protein Homology CDS 210022 210387 . + 0 ID=cds-WP_012173622.1;Parent=gene-DOLE_RS00970;Dbxref=Genbank:WP_012173622.1;Name=WP_012173622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024247.2;locus_tag=DOLE_RS00970;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012173622.1;transl_table=11 NC_009943.1 RefSeq gene 210524 213505 . + . ID=gene-DOLE_RS00975;Name=DOLE_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00975;old_locus_tag=Dole_0194 NC_009943.1 Protein Homology CDS 210524 213505 . + 0 ID=cds-WP_012173623.1;Parent=gene-DOLE_RS00975;Dbxref=Genbank:WP_012173623.1;Name=WP_012173623.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=DOLE_RS00975;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012173623.1;transl_table=11 NC_009943.1 RefSeq gene 213550 214215 . + . ID=gene-DOLE_RS00980;Name=DOLE_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00980;old_locus_tag=Dole_0195 NC_009943.1 Protein Homology CDS 213550 214215 . + 0 ID=cds-WP_012173624.1;Parent=gene-DOLE_RS00980;Dbxref=Genbank:WP_012173624.1;Name=WP_012173624.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF021010.2;locus_tag=DOLE_RS00980;product=ethylbenzene dehydrogenase-related protein;protein_id=WP_012173624.1;transl_table=11 NC_009943.1 RefSeq gene 214273 215442 . + . ID=gene-DOLE_RS00985;Name=DOLE_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00985;old_locus_tag=Dole_0196 NC_009943.1 Protein Homology CDS 214273 215442 . + 0 ID=cds-WP_012173625.1;Parent=gene-DOLE_RS00985;Dbxref=Genbank:WP_012173625.1;Name=WP_012173625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024644.2;locus_tag=DOLE_RS00985;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012173625.1;transl_table=11 NC_009943.1 RefSeq gene 215484 216233 . + . ID=gene-DOLE_RS00990;Name=DOLE_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00990;old_locus_tag=Dole_0197 NC_009943.1 Protein Homology CDS 215484 216233 . + 0 ID=cds-WP_012173626.1;Parent=gene-DOLE_RS00990;Dbxref=Genbank:WP_012173626.1;Name=WP_012173626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014651.2;locus_tag=DOLE_RS00990;product=molecular chaperone TorD family protein;protein_id=WP_012173626.1;transl_table=11 NC_009943.1 RefSeq gene 216247 217002 . + . ID=gene-DOLE_RS00995;Name=DOLE_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS00995;old_locus_tag=Dole_0198 NC_009943.1 Protein Homology CDS 216247 217002 . + 0 ID=cds-WP_012173627.1;Parent=gene-DOLE_RS00995;Dbxref=Genbank:WP_012173627.1;Name=WP_012173627.1;Ontology_term=GO:0009055,GO:0016491,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012263.2;locus_tag=DOLE_RS00995;product=cytochrome b N-terminal domain-containing protein;protein_id=WP_012173627.1;transl_table=11 NC_009943.1 RefSeq gene 217025 217768 . + . ID=gene-DOLE_RS01000;Name=DOLE_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01000;old_locus_tag=Dole_0199 NC_009943.1 Protein Homology CDS 217025 217768 . + 0 ID=cds-WP_012173628.1;Parent=gene-DOLE_RS01000;Dbxref=Genbank:WP_012173628.1;Name=WP_012173628.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012262.2;locus_tag=DOLE_RS01000;product=hypothetical protein;protein_id=WP_012173628.1;transl_table=11 NC_009943.1 RefSeq gene 217765 219996 . + . ID=gene-DOLE_RS01005;Name=DOLE_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01005;old_locus_tag=Dole_0200 NC_009943.1 Protein Homology CDS 217765 219996 . + 0 ID=cds-WP_012173629.1;Parent=gene-DOLE_RS01005;Dbxref=Genbank:WP_012173629.1;Name=WP_012173629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012264.2;locus_tag=DOLE_RS01005;product=cytochrome c;protein_id=WP_012173629.1;transl_table=11 NC_009943.1 RefSeq gene 220159 222813 . + . ID=gene-DOLE_RS01010;Name=DOLE_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01010;old_locus_tag=Dole_0201 NC_009943.1 Protein Homology CDS 220159 222813 . + 0 ID=cds-WP_012173630.1;Parent=gene-DOLE_RS01010;Dbxref=Genbank:WP_012173630.1;Name=WP_012173630.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024627.2;locus_tag=DOLE_RS01010;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_012173630.1;transl_table=11 NC_009943.1 RefSeq gene 222866 224179 . + . ID=gene-DOLE_RS01015;Name=DOLE_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01015;old_locus_tag=Dole_0202 NC_009943.1 Protein Homology CDS 222866 224179 . + 0 ID=cds-WP_052294226.1;Parent=gene-DOLE_RS01015;Dbxref=Genbank:WP_052294226.1;Name=WP_052294226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015418.2;locus_tag=DOLE_RS01015;product=molybdopterin molybdotransferase MoeA;protein_id=WP_052294226.1;transl_table=11 NC_009943.1 RefSeq gene 224226 225737 . + . ID=gene-DOLE_RS01020;Name=DOLE_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01020;old_locus_tag=Dole_0203 NC_009943.1 Protein Homology CDS 224226 225737 . + 0 ID=cds-WP_012173632.1;Parent=gene-DOLE_RS01020;Dbxref=Genbank:WP_012173632.1;Name=WP_012173632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173470.1;locus_tag=DOLE_RS01020;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012173632.1;transl_table=11 NC_009943.1 RefSeq gene 225801 226913 . + . ID=gene-DOLE_RS01025;Name=DOLE_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01025;old_locus_tag=Dole_0204 NC_009943.1 Protein Homology CDS 225801 226913 . + 0 ID=cds-WP_012173633.1;Parent=gene-DOLE_RS01025;Dbxref=Genbank:WP_012173633.1;Name=WP_012173633.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176318.1;locus_tag=DOLE_RS01025;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012173633.1;transl_table=11 NC_009943.1 RefSeq gene 227044 228987 . + . ID=gene-DOLE_RS01030;Name=DOLE_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01030;old_locus_tag=Dole_0205 NC_009943.1 Protein Homology CDS 227044 228987 . + 0 ID=cds-WP_012173634.1;Parent=gene-DOLE_RS01030;Dbxref=Genbank:WP_012173634.1;Name=WP_012173634.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=DOLE_RS01030;product=methyl-accepting chemotaxis protein;protein_id=WP_012173634.1;transl_table=11 NC_009943.1 RefSeq gene 229297 229776 . + . ID=gene-DOLE_RS01035;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=DOLE_RS01035;old_locus_tag=Dole_0206 NC_009943.1 Protein Homology CDS 229297 229776 . + 0 ID=cds-WP_012173635.1;Parent=gene-DOLE_RS01035;Dbxref=Genbank:WP_012173635.1;Name=WP_012173635.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: protein motif:HMM:TIGR00176.1;locus_tag=DOLE_RS01035;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_012173635.1;transl_table=11 NC_009943.1 RefSeq gene 229897 230220 . + . ID=gene-DOLE_RS01040;Name=DOLE_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01040;old_locus_tag=Dole_0207 NC_009943.1 Protein Homology CDS 229897 230220 . + 0 ID=cds-WP_232362719.1;Parent=gene-DOLE_RS01040;Dbxref=Genbank:WP_232362719.1;Name=WP_232362719.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724076.1;locus_tag=DOLE_RS01040;product=LysR family transcriptional regulator;protein_id=WP_232362719.1;transl_table=11 NC_009943.1 RefSeq gene 230312 231187 . + . ID=gene-DOLE_RS01045;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=DOLE_RS01045;old_locus_tag=Dole_0208 NC_009943.1 Protein Homology CDS 230312 231187 . + 0 ID=cds-WP_012173637.1;Parent=gene-DOLE_RS01045;Dbxref=Genbank:WP_012173637.1;Name=WP_012173637.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: protein motif:HMM:NF024921.2;locus_tag=DOLE_RS01045;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_012173637.1;transl_table=11 NC_009943.1 RefSeq gene 231184 231960 . + . ID=gene-DOLE_RS01050;Name=DOLE_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01050;old_locus_tag=Dole_0209 NC_009943.1 Protein Homology CDS 231184 231960 . + 0 ID=cds-WP_012173638.1;Parent=gene-DOLE_RS01050;Dbxref=Genbank:WP_012173638.1;Name=WP_012173638.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=DOLE_RS01050;product=ABC transporter permease;protein_id=WP_012173638.1;transl_table=11 NC_009943.1 RefSeq gene 231957 233048 . + . ID=gene-DOLE_RS01055;Name=DOLE_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01055;old_locus_tag=Dole_0210 NC_009943.1 Protein Homology CDS 231957 233048 . + 0 ID=cds-WP_012173639.1;Parent=gene-DOLE_RS01055;Dbxref=Genbank:WP_012173639.1;Name=WP_012173639.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173643.1;locus_tag=DOLE_RS01055;product=ATP-binding cassette domain-containing protein;protein_id=WP_012173639.1;transl_table=11 NC_009943.1 RefSeq gene 233386 234420 . + . ID=gene-DOLE_RS01060;Name=DOLE_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01060;old_locus_tag=Dole_0212 NC_009943.1 Protein Homology CDS 233386 234420 . + 0 ID=cds-WP_153304324.1;Parent=gene-DOLE_RS01060;Dbxref=Genbank:WP_153304324.1;Name=WP_153304324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024772.2;locus_tag=DOLE_RS01060;product=ABC transporter substrate-binding protein;protein_id=WP_153304324.1;transl_table=11 NC_009943.1 RefSeq gene 234410 235168 . + . ID=gene-DOLE_RS01065;Name=DOLE_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01065;old_locus_tag=Dole_0213 NC_009943.1 Protein Homology CDS 234410 235168 . + 0 ID=cds-WP_012173642.1;Parent=gene-DOLE_RS01065;Dbxref=Genbank:WP_012173642.1;Name=WP_012173642.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=DOLE_RS01065;product=ABC transporter permease;protein_id=WP_012173642.1;transl_table=11 NC_009943.1 RefSeq gene 235165 236256 . + . ID=gene-DOLE_RS01070;Name=DOLE_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01070;old_locus_tag=Dole_0214 NC_009943.1 Protein Homology CDS 235165 236256 . + 0 ID=cds-WP_012173643.1;Parent=gene-DOLE_RS01070;Dbxref=Genbank:WP_012173643.1;Name=WP_012173643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173639.1;locus_tag=DOLE_RS01070;product=ABC transporter ATP-binding protein;protein_id=WP_012173643.1;transl_table=11 NC_009943.1 RefSeq gene 236378 237106 . + . ID=gene-DOLE_RS01075;Name=DOLE_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01075;old_locus_tag=Dole_0215 NC_009943.1 Protein Homology CDS 236378 237106 . + 0 ID=cds-WP_012173644.1;Parent=gene-DOLE_RS01075;Dbxref=Genbank:WP_012173644.1;Name=WP_012173644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956450.1;locus_tag=DOLE_RS01075;product=DUF364 domain-containing protein;protein_id=WP_012173644.1;transl_table=11 NC_009943.1 RefSeq gene 237312 237557 . + . ID=gene-DOLE_RS01080;Name=DOLE_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01080;old_locus_tag=Dole_0216 NC_009943.1 Protein Homology CDS 237312 237557 . + 0 ID=cds-WP_012173645.1;Parent=gene-DOLE_RS01080;Dbxref=Genbank:WP_012173645.1;Name=WP_012173645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956819.1;locus_tag=DOLE_RS01080;product=hypothetical protein;protein_id=WP_012173645.1;transl_table=11 NC_009943.1 RefSeq gene 237669 238706 . - . ID=gene-DOLE_RS01085;Name=DOLE_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01085;old_locus_tag=Dole_0217 NC_009943.1 Protein Homology CDS 237669 238706 . - 0 ID=cds-WP_012173646.1;Parent=gene-DOLE_RS01085;Dbxref=Genbank:WP_012173646.1;Name=WP_012173646.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013972.2;locus_tag=DOLE_RS01085;product=START domain-containing protein;protein_id=WP_012173646.1;transl_table=11 NC_009943.1 RefSeq gene 238924 239370 . + . ID=gene-DOLE_RS01090;Name=DOLE_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01090;old_locus_tag=Dole_0218 NC_009943.1 GeneMarkS-2+ CDS 238924 239370 . + 0 ID=cds-WP_012173647.1;Parent=gene-DOLE_RS01090;Dbxref=Genbank:WP_012173647.1;Name=WP_012173647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01090;product=hypothetical protein;protein_id=WP_012173647.1;transl_table=11 NC_009943.1 RefSeq gene 239438 241240 . + . ID=gene-DOLE_RS01095;Name=DOLE_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01095;old_locus_tag=Dole_0219 NC_009943.1 Protein Homology CDS 239438 241240 . + 0 ID=cds-WP_012173648.1;Parent=gene-DOLE_RS01095;Dbxref=Genbank:WP_012173648.1;Name=WP_012173648.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS01095;product=radical SAM protein;protein_id=WP_012173648.1;transl_table=11 NC_009943.1 RefSeq gene 241252 241419 . + . ID=gene-DOLE_RS18100;Name=DOLE_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18100;old_locus_tag=Dole_0220 NC_009943.1 GeneMarkS-2+ CDS 241252 241419 . + 0 ID=cds-WP_012173649.1;Parent=gene-DOLE_RS18100;Dbxref=Genbank:WP_012173649.1;Name=WP_012173649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18100;product=hypothetical protein;protein_id=WP_012173649.1;transl_table=11 NC_009943.1 RefSeq gene 241716 245924 . + . ID=gene-DOLE_RS01100;Name=DOLE_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01100;old_locus_tag=Dole_0221 NC_009943.1 Protein Homology CDS 241716 245924 . + 0 ID=cds-WP_012173650.1;Parent=gene-DOLE_RS01100;Dbxref=Genbank:WP_012173650.1;Name=WP_012173650.1;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903142.1;locus_tag=DOLE_RS01100;product=PEP-utilizing enzyme;protein_id=WP_012173650.1;transl_table=11 NC_009943.1 RefSeq gene 246005 247258 . + . ID=gene-DOLE_RS01105;Name=DOLE_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01105;old_locus_tag=Dole_0222 NC_009943.1 Protein Homology CDS 246005 247258 . + 0 ID=cds-WP_012173651.1;Parent=gene-DOLE_RS01105;Dbxref=Genbank:WP_012173651.1;Name=WP_012173651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903141.1;locus_tag=DOLE_RS01105;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_012173651.1;transl_table=11 NC_009943.1 RefSeq gene 247351 247746 . + . ID=gene-DOLE_RS01110;Name=DOLE_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01110;old_locus_tag=Dole_0223 NC_009943.1 Protein Homology CDS 247351 247746 . + 0 ID=cds-WP_012173652.1;Parent=gene-DOLE_RS01110;Dbxref=Genbank:WP_012173652.1;Name=WP_012173652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS01110;product=response regulator;protein_id=WP_012173652.1;transl_table=11 NC_009943.1 RefSeq gene 247845 249020 . - . ID=gene-DOLE_RS01115;Name=DOLE_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01115;old_locus_tag=Dole_0224 NC_009943.1 Protein Homology CDS 247845 249020 . - 0 ID=cds-WP_012173653.1;Parent=gene-DOLE_RS01115;Dbxref=Genbank:WP_012173653.1;Name=WP_012173653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949184.1;locus_tag=DOLE_RS01115;product=thiolase family protein;protein_id=WP_012173653.1;transl_table=11 NC_009943.1 RefSeq gene 249046 250908 . - . ID=gene-DOLE_RS01120;Name=DOLE_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01120;old_locus_tag=Dole_0225 NC_009943.1 Protein Homology CDS 249046 250908 . - 0 ID=cds-WP_232362720.1;Parent=gene-DOLE_RS01120;Dbxref=Genbank:WP_232362720.1;Name=WP_232362720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949185.1;locus_tag=DOLE_RS01120;product=AMP-binding protein;protein_id=WP_232362720.1;transl_table=11 NC_009943.1 RefSeq gene 251032 251592 . - . ID=gene-DOLE_RS01125;Name=DOLE_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01125;old_locus_tag=Dole_0226 NC_009943.1 Protein Homology CDS 251032 251592 . - 0 ID=cds-WP_012173655.1;Parent=gene-DOLE_RS01125;Dbxref=Genbank:WP_012173655.1;Name=WP_012173655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949186.1;locus_tag=DOLE_RS01125;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_012173655.1;transl_table=11 NC_009943.1 RefSeq gene 251955 252572 . + . ID=gene-DOLE_RS16920;Name=DOLE_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16920;old_locus_tag=Dole_0228 NC_009943.1 Protein Homology CDS 251955 252572 . + 0 ID=cds-WP_012173657.1;Parent=gene-DOLE_RS16920;Dbxref=Genbank:WP_012173657.1;Name=WP_012173657.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS16920;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012173657.1;transl_table=11 NC_009943.1 RefSeq gene 252624 253778 . - . ID=gene-DOLE_RS01135;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=DOLE_RS01135;old_locus_tag=Dole_0229 NC_009943.1 Protein Homology CDS 252624 253778 . - 0 ID=cds-WP_012173658.1;Parent=gene-DOLE_RS01135;Dbxref=Genbank:WP_012173658.1;Name=WP_012173658.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:NF002751.0;locus_tag=DOLE_RS01135;product=DNA polymerase IV;protein_id=WP_012173658.1;transl_table=11 NC_009943.1 RefSeq gene 253885 254403 . - . ID=gene-DOLE_RS01140;Name=DOLE_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01140;old_locus_tag=Dole_0230 NC_009943.1 GeneMarkS-2+ CDS 253885 254403 . - 0 ID=cds-WP_012173659.1;Parent=gene-DOLE_RS01140;Dbxref=Genbank:WP_012173659.1;Name=WP_012173659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01140;product=hypothetical protein;protein_id=WP_012173659.1;transl_table=11 NC_009943.1 RefSeq gene 254396 255181 . - . ID=gene-DOLE_RS01145;Name=DOLE_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01145;old_locus_tag=Dole_0231 NC_009943.1 Protein Homology CDS 254396 255181 . - 0 ID=cds-WP_012173660.1;Parent=gene-DOLE_RS01145;Dbxref=Genbank:WP_012173660.1;Name=WP_012173660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877631.1;locus_tag=DOLE_RS01145;product=NRDE family protein;protein_id=WP_012173660.1;transl_table=11 NC_009943.1 RefSeq gene 255397 255472 . + . ID=gene-DOLE_RS01150;Name=DOLE_RS01150;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS01150;old_locus_tag=Dole_R0004 NC_009943.1 tRNAscan-SE tRNA 255397 255472 . + . ID=rna-DOLE_RS01150;Parent=gene-DOLE_RS01150;anticodon=(pos:255430..255432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS01150;product=tRNA-Asn NC_009943.1 tRNAscan-SE exon 255397 255472 . + . ID=exon-DOLE_RS01150-1;Parent=rna-DOLE_RS01150;anticodon=(pos:255430..255432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS01150;product=tRNA-Asn NC_009943.1 RefSeq gene 255885 256868 . + . ID=gene-DOLE_RS01155;Name=DOLE_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01155;old_locus_tag=Dole_0232 NC_009943.1 GeneMarkS-2+ CDS 255885 256868 . + 0 ID=cds-WP_012173661.1;Parent=gene-DOLE_RS01155;Dbxref=Genbank:WP_012173661.1;Name=WP_012173661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01155;product=hypothetical protein;protein_id=WP_012173661.1;transl_table=11 NC_009943.1 RefSeq gene 256865 257626 . + . ID=gene-DOLE_RS01160;Name=DOLE_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01160;old_locus_tag=Dole_0233 NC_009943.1 GeneMarkS-2+ CDS 256865 257626 . + 0 ID=cds-WP_012173662.1;Parent=gene-DOLE_RS01160;Dbxref=Genbank:WP_012173662.1;Name=WP_012173662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01160;product=hypothetical protein;protein_id=WP_012173662.1;transl_table=11 NC_009943.1 RefSeq gene 258242 258874 . + . ID=gene-DOLE_RS01165;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=DOLE_RS01165;old_locus_tag=Dole_0234 NC_009943.1 Protein Homology CDS 258242 258874 . + 0 ID=cds-WP_012173663.1;Parent=gene-DOLE_RS01165;Dbxref=Genbank:WP_012173663.1;Name=WP_012173663.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876793.1;locus_tag=DOLE_RS01165;product=transcriptional repressor LexA;protein_id=WP_012173663.1;transl_table=11 NC_009943.1 RefSeq gene 258905 259720 . + . ID=gene-DOLE_RS01170;Name=DOLE_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01170;old_locus_tag=Dole_0235 NC_009943.1 Protein Homology CDS 258905 259720 . + 0 ID=cds-WP_012173664.1;Parent=gene-DOLE_RS01170;Dbxref=Genbank:WP_012173664.1;Name=WP_012173664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404084.1;locus_tag=DOLE_RS01170;product=DUF72 domain-containing protein;protein_id=WP_012173664.1;transl_table=11 NC_009943.1 RefSeq gene 259717 260922 . + . ID=gene-DOLE_RS01175;Name=DOLE_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01175;old_locus_tag=Dole_0236 NC_009943.1 Protein Homology CDS 259717 260922 . + 0 ID=cds-WP_012173665.1;Parent=gene-DOLE_RS01175;Dbxref=Genbank:WP_012173665.1;Name=WP_012173665.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013015.2;locus_tag=DOLE_RS01175;product=DNA-directed DNA polymerase;protein_id=WP_012173665.1;transl_table=11 NC_009943.1 RefSeq gene 260928 263939 . + . ID=gene-DOLE_RS01180;Name=DOLE_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01180;old_locus_tag=Dole_0237 NC_009943.1 Protein Homology CDS 260928 263939 . + 0 ID=cds-WP_012173666.1;Parent=gene-DOLE_RS01180;Dbxref=Genbank:WP_012173666.1;Name=WP_012173666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585414.1;locus_tag=DOLE_RS01180;product=DNA polymerase III subunit alpha;protein_id=WP_012173666.1;transl_table=11 NC_009943.1 RefSeq gene 264050 265327 . + . ID=gene-DOLE_RS01185;Name=DOLE_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01185;old_locus_tag=Dole_0238 NC_009943.1 Protein Homology CDS 264050 265327 . + 0 ID=cds-WP_012173667.1;Parent=gene-DOLE_RS01185;Dbxref=Genbank:WP_012173667.1;Name=WP_012173667.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024491.2;locus_tag=DOLE_RS01185;product=phospholipase D-like domain-containing protein;protein_id=WP_012173667.1;transl_table=11 NC_009943.1 RefSeq gene 265545 266537 . - . ID=gene-DOLE_RS01190;Name=DOLE_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01190;old_locus_tag=Dole_0239 NC_009943.1 Protein Homology CDS 265545 266537 . - 0 ID=cds-WP_012173668.1;Parent=gene-DOLE_RS01190;Dbxref=Genbank:WP_012173668.1;Name=WP_012173668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024676.2;locus_tag=DOLE_RS01190;product=WYL domain-containing protein;protein_id=WP_012173668.1;transl_table=11 NC_009943.1 RefSeq gene 266710 268929 . + . ID=gene-DOLE_RS01195;Name=DOLE_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01195;old_locus_tag=Dole_0240 NC_009943.1 Protein Homology CDS 266710 268929 . + 0 ID=cds-WP_041280277.1;Parent=gene-DOLE_RS01195;Dbxref=Genbank:WP_041280277.1;Name=WP_041280277.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012234.2;locus_tag=DOLE_RS01195;product=AAA family ATPase;protein_id=WP_041280277.1;transl_table=11 NC_009943.1 RefSeq gene 269095 270585 . + . ID=gene-DOLE_RS01200;Name=DOLE_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01200;old_locus_tag=Dole_0241 NC_009943.1 Protein Homology CDS 269095 270585 . + 0 ID=cds-WP_012173670.1;Parent=gene-DOLE_RS01200;Dbxref=Genbank:WP_012173670.1;Name=WP_012173670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022525.2;locus_tag=DOLE_RS01200;product=DUF2779 domain-containing protein;protein_id=WP_012173670.1;transl_table=11 NC_009943.1 RefSeq gene 270853 272061 . - . ID=gene-DOLE_RS01205;Name=DOLE_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01205;old_locus_tag=Dole_0242 NC_009943.1 GeneMarkS-2+ CDS 270853 272061 . - 0 ID=cds-WP_041280278.1;Parent=gene-DOLE_RS01205;Dbxref=Genbank:WP_041280278.1;Name=WP_041280278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01205;product=hypothetical protein;protein_id=WP_041280278.1;transl_table=11 NC_009943.1 RefSeq gene 272158 273075 . - . ID=gene-DOLE_RS01210;Name=DOLE_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01210;old_locus_tag=Dole_0243 NC_009943.1 Protein Homology CDS 272158 273075 . - 0 ID=cds-WP_232362721.1;Parent=gene-DOLE_RS01210;Dbxref=Genbank:WP_232362721.1;Name=WP_232362721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174116.1;locus_tag=DOLE_RS01210;product=virulence RhuM family protein;protein_id=WP_232362721.1;transl_table=11 NC_009943.1 RefSeq gene 273252 274013 . - . ID=gene-DOLE_RS01215;Name=DOLE_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01215;old_locus_tag=Dole_0244 NC_009943.1 Protein Homology CDS 273252 274013 . - 0 ID=cds-WP_012173673.1;Parent=gene-DOLE_RS01215;Dbxref=Genbank:WP_012173673.1;Name=WP_012173673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013980.2;locus_tag=DOLE_RS01215;product=SprT family zinc-dependent metalloprotease;protein_id=WP_012173673.1;transl_table=11 NC_009943.1 RefSeq gene 274010 277126 . - . ID=gene-DOLE_RS01220;Name=DOLE_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01220;old_locus_tag=Dole_0245 NC_009943.1 Protein Homology CDS 274010 277126 . - 0 ID=cds-WP_012173674.1;Parent=gene-DOLE_RS01220;Dbxref=Genbank:WP_012173674.1;Name=WP_012173674.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00348.1;locus_tag=DOLE_RS01220;product=type I restriction endonuclease subunit R;protein_id=WP_012173674.1;transl_table=11 NC_009943.1 RefSeq gene 277119 279092 . - . ID=gene-DOLE_RS01225;Name=DOLE_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01225;old_locus_tag=Dole_0246 NC_009943.1 Protein Homology CDS 277119 279092 . - 0 ID=cds-WP_012173675.1;Parent=gene-DOLE_RS01225;Dbxref=Genbank:WP_012173675.1;Name=WP_012173675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.2;locus_tag=DOLE_RS01225;product=DUF262 domain-containing protein;protein_id=WP_012173675.1;transl_table=11 NC_009943.1 RefSeq gene 279465 281609 . - . ID=gene-DOLE_RS01230;Name=DOLE_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01230;old_locus_tag=Dole_0247 NC_009943.1 Protein Homology CDS 279465 281609 . - 0 ID=cds-WP_012173676.1;Parent=gene-DOLE_RS01230;Dbxref=Genbank:WP_012173676.1;Name=WP_012173676.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.2;locus_tag=DOLE_RS01230;product=DUF262 domain-containing protein;protein_id=WP_012173676.1;transl_table=11 NC_009943.1 RefSeq gene 281606 283453 . - . ID=gene-DOLE_RS01235;Name=DOLE_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01235;old_locus_tag=Dole_0248 NC_009943.1 Protein Homology CDS 281606 283453 . - 0 ID=cds-WP_012173677.1;Parent=gene-DOLE_RS01235;Dbxref=Genbank:WP_012173677.1;Name=WP_012173677.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.2;locus_tag=DOLE_RS01235;product=DUF262 domain-containing protein;protein_id=WP_012173677.1;transl_table=11 NC_009943.1 RefSeq gene 283450 284631 . - . ID=gene-DOLE_RS01240;Name=DOLE_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01240;old_locus_tag=Dole_0249 NC_009943.1 Protein Homology CDS 283450 284631 . - 0 ID=cds-WP_012173678.1;Parent=gene-DOLE_RS01240;Dbxref=Genbank:WP_012173678.1;Name=WP_012173678.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=DOLE_RS01240;product=restriction endonuclease subunit S;protein_id=WP_012173678.1;transl_table=11 NC_009943.1 RefSeq gene 284628 285779 . - . ID=gene-DOLE_RS01245;Name=DOLE_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01245;old_locus_tag=Dole_0250 NC_009943.1 Protein Homology CDS 284628 285779 . - 0 ID=cds-WP_012173679.1;Parent=gene-DOLE_RS01245;Dbxref=Genbank:WP_012173679.1;Name=WP_012173679.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025124.2;locus_tag=DOLE_RS01245;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_012173679.1;transl_table=11 NC_009943.1 RefSeq gene 285776 288202 . - . ID=gene-DOLE_RS01250;Name=DOLE_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01250;old_locus_tag=Dole_0251 NC_009943.1 Protein Homology CDS 285776 288202 . - 0 ID=cds-WP_012173680.1;Parent=gene-DOLE_RS01250;Dbxref=Genbank:WP_012173680.1;Name=WP_012173680.1;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585443.1;locus_tag=DOLE_RS01250;product=type I restriction-modification system subunit M;protein_id=WP_012173680.1;transl_table=11 NC_009943.1 RefSeq gene 288729 289730 . + . ID=gene-DOLE_RS01255;Name=DOLE_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01255;old_locus_tag=Dole_0252 NC_009943.1 Protein Homology CDS 288729 289730 . + 0 ID=cds-WP_012173681.1;Parent=gene-DOLE_RS01255;Dbxref=Genbank:WP_012173681.1;Name=WP_012173681.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025639.2;locus_tag=DOLE_RS01255;product=PD-(D/E)XK nuclease family protein;protein_id=WP_012173681.1;transl_table=11 NC_009943.1 RefSeq gene 289727 290275 . + . ID=gene-DOLE_RS01260;Name=DOLE_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01260;old_locus_tag=Dole_0253 NC_009943.1 GeneMarkS-2+ CDS 289727 290275 . + 0 ID=cds-WP_012173682.1;Parent=gene-DOLE_RS01260;Dbxref=Genbank:WP_012173682.1;Name=WP_012173682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01260;product=cell division GTPase-like protein;protein_id=WP_012173682.1;transl_table=11 NC_009943.1 RefSeq gene 290333 290890 . + . ID=gene-DOLE_RS01265;Name=DOLE_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01265;old_locus_tag=Dole_0254 NC_009943.1 GeneMarkS-2+ CDS 290333 290890 . + 0 ID=cds-WP_012173683.1;Parent=gene-DOLE_RS01265;Dbxref=Genbank:WP_012173683.1;Name=WP_012173683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01265;product=hypothetical protein;protein_id=WP_012173683.1;transl_table=11 NC_009943.1 RefSeq gene 290883 291491 . + . ID=gene-DOLE_RS01270;Name=DOLE_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01270;old_locus_tag=Dole_0255 NC_009943.1 Protein Homology CDS 290883 291491 . + 0 ID=cds-WP_167320825.1;Parent=gene-DOLE_RS01270;Dbxref=Genbank:WP_167320825.1;Name=WP_167320825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012320.2;locus_tag=DOLE_RS01270;product=hypothetical protein;protein_id=WP_167320825.1;transl_table=11 NC_009943.1 RefSeq gene 291527 292033 . + . ID=gene-DOLE_RS01275;Name=DOLE_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01275;old_locus_tag=Dole_0256 NC_009943.1 GeneMarkS-2+ CDS 291527 292033 . + 0 ID=cds-WP_012173685.1;Parent=gene-DOLE_RS01275;Dbxref=Genbank:WP_012173685.1;Name=WP_012173685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01275;product=hypothetical protein;protein_id=WP_012173685.1;transl_table=11 NC_009943.1 RefSeq gene 292089 292511 . + . ID=gene-DOLE_RS01280;Name=DOLE_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01280;old_locus_tag=Dole_0257 NC_009943.1 Protein Homology CDS 292089 292511 . + 0 ID=cds-WP_012173686.1;Parent=gene-DOLE_RS01280;Dbxref=Genbank:WP_012173686.1;Name=WP_012173686.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03655.1;locus_tag=DOLE_RS01280;product=Lar family restriction alleviation protein;protein_id=WP_012173686.1;transl_table=11 NC_009943.1 RefSeq gene 292508 293143 . + . ID=gene-DOLE_RS01285;Name=DOLE_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01285;old_locus_tag=Dole_0258 NC_009943.1 GeneMarkS-2+ CDS 292508 293143 . + 0 ID=cds-WP_012173687.1;Parent=gene-DOLE_RS01285;Dbxref=Genbank:WP_012173687.1;Name=WP_012173687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01285;product=hypothetical protein;protein_id=WP_012173687.1;transl_table=11 NC_009943.1 RefSeq gene 293145 294113 . + . ID=gene-DOLE_RS01290;Name=DOLE_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01290;old_locus_tag=Dole_0259 NC_009943.1 GeneMarkS-2+ CDS 293145 294113 . + 0 ID=cds-WP_012173688.1;Parent=gene-DOLE_RS01290;Dbxref=Genbank:WP_012173688.1;Name=WP_012173688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01290;product=hypothetical protein;protein_id=WP_012173688.1;transl_table=11 NC_009943.1 RefSeq gene 294125 295450 . + . ID=gene-DOLE_RS01295;Name=DOLE_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01295;old_locus_tag=Dole_0260 NC_009943.1 Protein Homology CDS 294125 295450 . + 0 ID=cds-WP_012173689.1;Parent=gene-DOLE_RS01295;Dbxref=Genbank:WP_012173689.1;Name=WP_012173689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS01295;product=MBL fold metallo-hydrolase;protein_id=WP_012173689.1;transl_table=11 NC_009943.1 RefSeq gene 295666 299319 . + . ID=gene-DOLE_RS01300;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=DOLE_RS01300;old_locus_tag=Dole_0261 NC_009943.1 Protein Homology CDS 295666 299319 . + 0 ID=cds-WP_012173690.1;Parent=gene-DOLE_RS01300;Dbxref=Genbank:WP_012173690.1;Name=WP_012173690.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF004226.0;locus_tag=DOLE_RS01300;product=DNA polymerase III subunit alpha;protein_id=WP_012173690.1;transl_table=11 NC_009943.1 RefSeq gene 299412 300380 . + . ID=gene-DOLE_RS01305;Name=DOLE_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01305;old_locus_tag=Dole_0262 NC_009943.1 GeneMarkS-2+ CDS 299412 300380 . + 0 ID=cds-WP_012173691.1;Parent=gene-DOLE_RS01305;Dbxref=Genbank:WP_012173691.1;Name=WP_012173691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01305;product=hypothetical protein;protein_id=WP_012173691.1;transl_table=11 NC_009943.1 RefSeq gene 300384 300938 . - . ID=gene-DOLE_RS01310;Name=DOLE_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01310;old_locus_tag=Dole_0263 NC_009943.1 Protein Homology CDS 300384 300938 . - 0 ID=cds-WP_012173692.1;Parent=gene-DOLE_RS01310;Dbxref=Genbank:WP_012173692.1;Name=WP_012173692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024812.2;locus_tag=DOLE_RS01310;product=GNAT family N-acetyltransferase;protein_id=WP_012173692.1;transl_table=11 NC_009943.1 RefSeq gene 301074 301667 . - . ID=gene-DOLE_RS01315;Name=DOLE_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01315;old_locus_tag=Dole_0264 NC_009943.1 GeneMarkS-2+ CDS 301074 301667 . - 0 ID=cds-WP_012173693.1;Parent=gene-DOLE_RS01315;Dbxref=Genbank:WP_012173693.1;Name=WP_012173693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01315;product=hypothetical protein;protein_id=WP_012173693.1;transl_table=11 NC_009943.1 RefSeq gene 302163 303782 . + . ID=gene-DOLE_RS17785;Name=DOLE_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17785;old_locus_tag=Dole_0265 NC_009943.1 Protein Homology CDS 302163 303782 . + 0 ID=cds-WP_012173694.1;Parent=gene-DOLE_RS17785;Dbxref=Genbank:WP_012173694.1;Name=WP_012173694.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.2;locus_tag=DOLE_RS17785;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_012173694.1;transl_table=11 NC_009943.1 RefSeq gene 304254 305339 . - . ID=gene-DOLE_RS01325;Name=DOLE_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01325;old_locus_tag=Dole_0266 NC_009943.1 Protein Homology CDS 304254 305339 . - 0 ID=cds-WP_012173695.1;Parent=gene-DOLE_RS01325;Dbxref=Genbank:WP_012173695.1;Name=WP_012173695.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946862.1;locus_tag=DOLE_RS01325;product=FAD-dependent oxidoreductase;protein_id=WP_012173695.1;transl_table=11 NC_009943.1 RefSeq gene 305854 306462 . + . ID=gene-DOLE_RS18530;Name=DOLE_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18530;old_locus_tag=Dole_0267 NC_009943.1 Protein Homology CDS 305854 306462 . + 0 ID=cds-WP_012173696.1;Parent=gene-DOLE_RS18530;Dbxref=Genbank:WP_012173696.1;Name=WP_012173696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014176.2;locus_tag=DOLE_RS18530;product=cytochrome c3 family protein;protein_id=WP_012173696.1;transl_table=11 NC_009943.1 RefSeq gene 306709 308604 . + . ID=gene-DOLE_RS01335;Name=DOLE_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01335;old_locus_tag=Dole_0268 NC_009943.1 Protein Homology CDS 306709 308604 . + 0 ID=cds-WP_012173697.1;Parent=gene-DOLE_RS01335;Dbxref=Genbank:WP_012173697.1;Name=WP_012173697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025010.2;locus_tag=DOLE_RS01335;product=SurA N-terminal domain-containing protein;protein_id=WP_012173697.1;transl_table=11 NC_009943.1 RefSeq gene 308652 308903 . + . ID=gene-DOLE_RS01340;Name=DOLE_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01340;old_locus_tag=Dole_0269 NC_009943.1 GeneMarkS-2+ CDS 308652 308903 . + 0 ID=cds-WP_012173698.1;Parent=gene-DOLE_RS01340;Dbxref=Genbank:WP_012173698.1;Name=WP_012173698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01340;product=hypothetical protein;protein_id=WP_012173698.1;transl_table=11 NC_009943.1 RefSeq gene 308974 309252 . + . ID=gene-DOLE_RS01345;Name=DOLE_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01345;old_locus_tag=Dole_0270 NC_009943.1 GeneMarkS-2+ CDS 308974 309252 . + 0 ID=cds-WP_012173699.1;Parent=gene-DOLE_RS01345;Dbxref=Genbank:WP_012173699.1;Name=WP_012173699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01345;product=hypothetical protein;protein_id=WP_012173699.1;transl_table=11 NC_009943.1 RefSeq gene 309555 310406 . + . ID=gene-DOLE_RS01350;Name=DOLE_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01350;old_locus_tag=Dole_0271 NC_009943.1 Protein Homology CDS 309555 310406 . + 0 ID=cds-WP_012173700.1;Parent=gene-DOLE_RS01350;Dbxref=Genbank:WP_012173700.1;Name=WP_012173700.1;Ontology_term=GO:0006631;gbkey=CDS;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004075477.1;locus_tag=DOLE_RS01350;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=WP_012173700.1;transl_table=11 NC_009943.1 RefSeq gene 310421 310597 . + . ID=gene-DOLE_RS18110;Name=DOLE_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18110;old_locus_tag=Dole_0272 NC_009943.1 GeneMarkS-2+ CDS 310421 310597 . + 0 ID=cds-WP_012173701.1;Parent=gene-DOLE_RS18110;Dbxref=Genbank:WP_012173701.1;Name=WP_012173701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18110;product=hypothetical protein;protein_id=WP_012173701.1;transl_table=11 NC_009943.1 RefSeq gene 310608 310838 . + . ID=gene-DOLE_RS01355;Name=DOLE_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01355 NC_009943.1 GeneMarkS-2+ CDS 310608 310838 . + 0 ID=cds-WP_041280281.1;Parent=gene-DOLE_RS01355;Dbxref=Genbank:WP_041280281.1;Name=WP_041280281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01355;product=hypothetical protein;protein_id=WP_041280281.1;transl_table=11 NC_009943.1 RefSeq gene 310875 311600 . - . ID=gene-DOLE_RS01360;Name=DOLE_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01360;old_locus_tag=Dole_0273 NC_009943.1 Protein Homology CDS 310875 311600 . - 0 ID=cds-WP_012173702.1;Parent=gene-DOLE_RS01360;Dbxref=Genbank:WP_012173702.1;Name=WP_012173702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724810.1;locus_tag=DOLE_RS01360;product=TerC family protein;protein_id=WP_012173702.1;transl_table=11 NC_009943.1 RefSeq gene 312270 314300 . + . ID=gene-DOLE_RS01365;Name=DOLE_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01365;old_locus_tag=Dole_0274 NC_009943.1 GeneMarkS-2+ CDS 312270 314300 . + 0 ID=cds-WP_012173703.1;Parent=gene-DOLE_RS01365;Dbxref=Genbank:WP_012173703.1;Name=WP_012173703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01365;product=radical SAM protein;protein_id=WP_012173703.1;transl_table=11 NC_009943.1 RefSeq gene 314325 316082 . + . ID=gene-DOLE_RS01370;Name=DOLE_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01370;old_locus_tag=Dole_0275 NC_009943.1 Protein Homology CDS 314325 316082 . + 0 ID=cds-WP_083766495.1;Parent=gene-DOLE_RS01370;Dbxref=Genbank:WP_083766495.1;Name=WP_083766495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS01370;product=tetratricopeptide repeat protein;protein_id=WP_083766495.1;transl_table=11 NC_009943.1 RefSeq gene 316441 318150 . + . ID=gene-DOLE_RS01375;Name=DOLE_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01375;old_locus_tag=Dole_0276 NC_009943.1 Protein Homology CDS 316441 318150 . + 0 ID=cds-WP_012173705.1;Parent=gene-DOLE_RS01375;Dbxref=Genbank:WP_012173705.1;Name=WP_012173705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015722988.1;locus_tag=DOLE_RS01375;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_012173705.1;transl_table=11 NC_009943.1 RefSeq gene 318150 319391 . + . ID=gene-DOLE_RS01380;Name=DOLE_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01380;old_locus_tag=Dole_0277 NC_009943.1 Protein Homology CDS 318150 319391 . + 0 ID=cds-WP_012173706.1;Parent=gene-DOLE_RS01380;Dbxref=Genbank:WP_012173706.1;Name=WP_012173706.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=DOLE_RS01380;product=restriction endonuclease subunit S;protein_id=WP_012173706.1;transl_table=11 NC_009943.1 RefSeq gene 319388 322357 . + . ID=gene-DOLE_RS01385;Name=DOLE_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01385;old_locus_tag=Dole_0278 NC_009943.1 Protein Homology CDS 319388 322357 . + 0 ID=cds-WP_012173707.1;Parent=gene-DOLE_RS01385;Dbxref=Genbank:WP_012173707.1;Name=WP_012173707.1;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=DOLE_RS01385;product=type I restriction endonuclease;protein_id=WP_012173707.1;transl_table=11 NC_009943.1 RefSeq gene 322487 323608 . + . ID=gene-DOLE_RS01390;Name=DOLE_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01390;old_locus_tag=Dole_0279 NC_009943.1 Protein Homology CDS 322487 323608 . + 0 ID=cds-WP_012173708.1;Parent=gene-DOLE_RS01390;Dbxref=Genbank:WP_012173708.1;Name=WP_012173708.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04474.1;locus_tag=DOLE_RS01390;product=three-Cys-motif partner protein TcmP;protein_id=WP_012173708.1;transl_table=11 NC_009943.1 RefSeq gene 323605 324348 . + . ID=gene-DOLE_RS01395;Name=DOLE_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01395;old_locus_tag=Dole_0280 NC_009943.1 Protein Homology CDS 323605 324348 . + 0 ID=cds-WP_012173709.1;Parent=gene-DOLE_RS01395;Dbxref=Genbank:WP_012173709.1;Name=WP_012173709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958461.1;locus_tag=DOLE_RS01395;product=phage Gp37/Gp68 family protein;protein_id=WP_012173709.1;transl_table=11 NC_009943.1 RefSeq gene 324652 325107 . + . ID=gene-DOLE_RS01400;Name=DOLE_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01400 NC_009943.1 GeneMarkS-2+ CDS 324652 325107 . + 0 ID=cds-WP_041280284.1;Parent=gene-DOLE_RS01400;Dbxref=Genbank:WP_041280284.1;Name=WP_041280284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01400;product=hypothetical protein;protein_id=WP_041280284.1;transl_table=11 NC_009943.1 RefSeq gene 325517 326140 . + . ID=gene-DOLE_RS01405;Name=DOLE_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01405;old_locus_tag=Dole_0281 NC_009943.1 Protein Homology CDS 325517 326140 . + 0 ID=cds-WP_012173710.1;Parent=gene-DOLE_RS01405;Dbxref=Genbank:WP_012173710.1;Name=WP_012173710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016024.2;locus_tag=DOLE_RS01405;product=Rad52/Rad22 family DNA repair protein;protein_id=WP_012173710.1;transl_table=11 NC_009943.1 RefSeq gene 326227 327066 . + . ID=gene-DOLE_RS01410;Name=DOLE_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01410;old_locus_tag=Dole_0282 NC_009943.1 Protein Homology CDS 326227 327066 . + 0 ID=cds-WP_012173711.1;Parent=gene-DOLE_RS01410;Dbxref=Genbank:WP_012173711.1;Name=WP_012173711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024117.2;locus_tag=DOLE_RS01410;product=PD-(D/E)XK nuclease family protein;protein_id=WP_012173711.1;transl_table=11 NC_009943.1 RefSeq gene 327183 328139 . + . ID=gene-DOLE_RS01415;Name=DOLE_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01415;old_locus_tag=Dole_0283 NC_009943.1 Protein Homology CDS 327183 328139 . + 0 ID=cds-WP_012173712.1;Parent=gene-DOLE_RS01415;Dbxref=Genbank:WP_012173712.1;Name=WP_012173712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585776.1;locus_tag=DOLE_RS01415;product=DUF932 domain-containing protein;protein_id=WP_012173712.1;transl_table=11 NC_009943.1 RefSeq gene 328213 328404 . + . ID=gene-DOLE_RS01420;Name=DOLE_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01420;old_locus_tag=Dole_0284 NC_009943.1 Protein Homology CDS 328213 328404 . + 0 ID=cds-WP_012173713.1;Parent=gene-DOLE_RS01420;Dbxref=Genbank:WP_012173713.1;Name=WP_012173713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585841.1;locus_tag=DOLE_RS01420;product=hypothetical protein;protein_id=WP_012173713.1;transl_table=11 NC_009943.1 RefSeq gene 328431 328598 . + . ID=gene-DOLE_RS18360;Name=DOLE_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18360;old_locus_tag=Dole_0285 NC_009943.1 Protein Homology CDS 328431 328598 . + 0 ID=cds-WP_012173714.1;Parent=gene-DOLE_RS18360;Dbxref=Genbank:WP_012173714.1;Name=WP_012173714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968156.1;locus_tag=DOLE_RS18360;product=hypothetical protein;protein_id=WP_012173714.1;transl_table=11 NC_009943.1 RefSeq gene 328705 328974 . + . ID=gene-DOLE_RS01425;Name=DOLE_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01425 NC_009943.1 Protein Homology CDS 328705 328974 . + 0 ID=cds-WP_041280285.1;Parent=gene-DOLE_RS01425;Dbxref=Genbank:WP_041280285.1;Name=WP_041280285.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=DOLE_RS01425;product=MerR family transcriptional regulator;protein_id=WP_041280285.1;transl_table=11 NC_009943.1 RefSeq gene 328964 329290 . + . ID=gene-DOLE_RS01430;Name=DOLE_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01430;old_locus_tag=Dole_0286 NC_009943.1 Protein Homology CDS 328964 329290 . + 0 ID=cds-WP_012173715.1;Parent=gene-DOLE_RS01430;Dbxref=Genbank:WP_012173715.1;Name=WP_012173715.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020376.2;locus_tag=DOLE_RS01430;product=HIRAN domain-containing protein;protein_id=WP_012173715.1;transl_table=11 NC_009943.1 RefSeq gene 329300 330964 . + . ID=gene-DOLE_RS01435;Name=DOLE_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01435;old_locus_tag=Dole_0287 NC_009943.1 GeneMarkS-2+ CDS 329300 330964 . + 0 ID=cds-WP_041280286.1;Parent=gene-DOLE_RS01435;Dbxref=Genbank:WP_041280286.1;Name=WP_041280286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01435;product=hypothetical protein;protein_id=WP_041280286.1;transl_table=11 NC_009943.1 RefSeq gene 331388 332584 . + . ID=gene-DOLE_RS01440;Name=DOLE_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01440;old_locus_tag=Dole_0288 NC_009943.1 Protein Homology CDS 331388 332584 . + 0 ID=cds-WP_041280287.1;Parent=gene-DOLE_RS01440;Dbxref=Genbank:WP_041280287.1;Name=WP_041280287.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=DOLE_RS01440;product=site-specific integrase;protein_id=WP_041280287.1;transl_table=11 NC_009943.1 RefSeq gene 332613 332689 . - . ID=gene-DOLE_RS01445;Name=DOLE_RS01445;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS01445;old_locus_tag=Dole_R0005 NC_009943.1 tRNAscan-SE tRNA 332613 332689 . - . ID=rna-DOLE_RS01445;Parent=gene-DOLE_RS01445;anticodon=(pos:complement(332653..332655));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS01445;product=tRNA-Met NC_009943.1 tRNAscan-SE exon 332613 332689 . - . ID=exon-DOLE_RS01445-1;Parent=rna-DOLE_RS01445;anticodon=(pos:complement(332653..332655));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS01445;product=tRNA-Met NC_009943.1 RefSeq gene 332755 333066 . - . ID=gene-DOLE_RS01450;Name=DOLE_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01450;old_locus_tag=Dole_0289 NC_009943.1 Protein Homology CDS 332755 333066 . - 0 ID=cds-WP_012173718.1;Parent=gene-DOLE_RS01450;Dbxref=Genbank:WP_012173718.1;Name=WP_012173718.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014633.2;locus_tag=DOLE_RS01450;product=DUF167 domain-containing protein;protein_id=WP_012173718.1;transl_table=11 NC_009943.1 RefSeq gene 333067 333672 . - . ID=gene-DOLE_RS01455;Name=thrH;gbkey=Gene;gene=thrH;gene_biotype=protein_coding;locus_tag=DOLE_RS01455;old_locus_tag=Dole_0290 NC_009943.1 Protein Homology CDS 333067 333672 . - 0 ID=cds-WP_012173719.1;Parent=gene-DOLE_RS01455;Dbxref=Genbank:WP_012173719.1;Name=WP_012173719.1;gbkey=CDS;gene=thrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589390.1;locus_tag=DOLE_RS01455;product=bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH;protein_id=WP_012173719.1;transl_table=11 NC_009943.1 RefSeq gene 333695 335011 . - . ID=gene-DOLE_RS01460;Name=DOLE_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01460;old_locus_tag=Dole_0291 NC_009943.1 Protein Homology CDS 333695 335011 . - 0 ID=cds-WP_012173720.1;Parent=gene-DOLE_RS01460;Dbxref=Genbank:WP_012173720.1;Name=WP_012173720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878334.1;locus_tag=DOLE_RS01460;product=homoserine dehydrogenase;protein_id=WP_012173720.1;transl_table=11 NC_009943.1 RefSeq gene 335021 336190 . - . ID=gene-DOLE_RS01465;Name=DOLE_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01465;old_locus_tag=Dole_0292 NC_009943.1 Protein Homology CDS 335021 336190 . - 0 ID=cds-WP_041280715.1;Parent=gene-DOLE_RS01465;Dbxref=Genbank:WP_041280715.1;Name=WP_041280715.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609854.1;locus_tag=DOLE_RS01465;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_041280715.1;transl_table=11 NC_009943.1 RefSeq gene 336565 337605 . + . ID=gene-DOLE_RS01470;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=DOLE_RS01470;old_locus_tag=Dole_0293 NC_009943.1 Protein Homology CDS 336565 337605 . + 0 ID=cds-WP_012173722.1;Parent=gene-DOLE_RS01470;Dbxref=Genbank:WP_012173722.1;Name=WP_012173722.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878335.1;locus_tag=DOLE_RS01470;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_012173722.1;transl_table=11 NC_009943.1 RefSeq gene 338016 339026 . + . ID=gene-DOLE_RS01475;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=DOLE_RS01475;old_locus_tag=Dole_0294 NC_009943.1 Protein Homology CDS 338016 339026 . + 0 ID=cds-WP_041280288.1;Parent=gene-DOLE_RS01475;Dbxref=Genbank:WP_041280288.1;Name=WP_041280288.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609851.1;locus_tag=DOLE_RS01475;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_041280288.1;transl_table=11 NC_009943.1 RefSeq gene 339168 339416 . - . ID=gene-DOLE_RS01480;Name=DOLE_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01480 NC_009943.1 GeneMarkS-2+ CDS 339168 339416 . - 0 ID=cds-WP_153304327.1;Parent=gene-DOLE_RS01480;Dbxref=Genbank:WP_153304327.1;Name=WP_153304327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01480;product=hypothetical protein;protein_id=WP_153304327.1;transl_table=11 NC_009943.1 RefSeq gene 339512 340543 . - . ID=gene-DOLE_RS01485;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=DOLE_RS01485;old_locus_tag=Dole_0295 NC_009943.1 Protein Homology CDS 339512 340543 . - 0 ID=cds-WP_012173724.1;Parent=gene-DOLE_RS01485;Dbxref=Genbank:WP_012173724.1;Name=WP_012173724.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948721.1;locus_tag=DOLE_RS01485;product=beta-N-acetylhexosaminidase;protein_id=WP_012173724.1;transl_table=11 NC_009943.1 RefSeq gene 340580 341374 . - . ID=gene-DOLE_RS16930;Name=DOLE_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16930;old_locus_tag=Dole_0296 NC_009943.1 Protein Homology CDS 340580 341374 . - 0 ID=cds-WP_012173725.1;Parent=gene-DOLE_RS16930;Dbxref=Genbank:WP_012173725.1;Name=WP_012173725.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025008.2;locus_tag=DOLE_RS16930;product=thioesterase family protein;protein_id=WP_012173725.1;transl_table=11 NC_009943.1 RefSeq gene 341403 342182 . - . ID=gene-DOLE_RS01495;Name=DOLE_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01495;old_locus_tag=Dole_0297 NC_009943.1 Protein Homology CDS 341403 342182 . - 0 ID=cds-WP_167320826.1;Parent=gene-DOLE_RS01495;Dbxref=Genbank:WP_167320826.1;Name=WP_167320826.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF016908.2;locus_tag=DOLE_RS01495;product=FkbM family methyltransferase;protein_id=WP_167320826.1;transl_table=11 NC_009943.1 RefSeq gene 342744 343412 . + . ID=gene-DOLE_RS01500;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=DOLE_RS01500;old_locus_tag=Dole_0298 NC_009943.1 Protein Homology CDS 342744 343412 . + 0 ID=cds-WP_012173727.1;Parent=gene-DOLE_RS01500;Dbxref=Genbank:WP_012173727.1;Name=WP_012173727.1;Ontology_term=GO:0036211,GO:0000166,GO:0016530;gbkey=CDS;gene=hypB;go_function=nucleotide binding|0000166||IEA,metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588180.1;locus_tag=DOLE_RS01500;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_012173727.1;transl_table=11 NC_009943.1 RefSeq gene 343453 344301 . + . ID=gene-DOLE_RS01505;Name=amrB;gbkey=Gene;gene=amrB;gene_biotype=protein_coding;locus_tag=DOLE_RS01505;old_locus_tag=Dole_0299 NC_009943.1 Protein Homology CDS 343453 344301 . + 0 ID=cds-WP_012173728.1;Parent=gene-DOLE_RS01505;Dbxref=Genbank:WP_012173728.1;Name=WP_012173728.1;gbkey=CDS;gene=amrB;inference=COORDINATES: protein motif:HMM:TIGR04336.1;locus_tag=DOLE_RS01505;product=AmmeMemoRadiSam system protein B;protein_id=WP_012173728.1;transl_table=11 NC_009943.1 RefSeq gene 344402 345388 . + . ID=gene-DOLE_RS01510;Name=DOLE_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01510;old_locus_tag=Dole_0300 NC_009943.1 Protein Homology CDS 344402 345388 . + 0 ID=cds-WP_012173729.1;Parent=gene-DOLE_RS01510;Dbxref=Genbank:WP_012173729.1;Name=WP_012173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610225.1;locus_tag=DOLE_RS01510;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012173729.1;transl_table=11 NC_009943.1 RefSeq gene 345388 345852 . + . ID=gene-DOLE_RS01515;Name=DOLE_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01515;old_locus_tag=Dole_0301 NC_009943.1 GeneMarkS-2+ CDS 345388 345852 . + 0 ID=cds-WP_012173730.1;Parent=gene-DOLE_RS01515;Dbxref=Genbank:WP_012173730.1;Name=WP_012173730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01515;product=hypothetical protein;protein_id=WP_012173730.1;transl_table=11 NC_009943.1 RefSeq gene 346015 347349 . - . ID=gene-DOLE_RS01520;Name=DOLE_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01520;old_locus_tag=Dole_0302 NC_009943.1 Protein Homology CDS 346015 347349 . - 0 ID=cds-WP_012173731.1;Parent=gene-DOLE_RS01520;Dbxref=Genbank:WP_012173731.1;Name=WP_012173731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876343.1;locus_tag=DOLE_RS01520;product=(Fe-S)-binding protein;protein_id=WP_012173731.1;transl_table=11 NC_009943.1 RefSeq gene 347399 348076 . - . ID=gene-DOLE_RS01525;Name=DOLE_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01525;old_locus_tag=Dole_0303 NC_009943.1 Protein Homology CDS 347399 348076 . - 0 ID=cds-WP_012173732.1;Parent=gene-DOLE_RS01525;Dbxref=Genbank:WP_012173732.1;Name=WP_012173732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876344.1;locus_tag=DOLE_RS01525;product=hypothetical protein;protein_id=WP_012173732.1;transl_table=11 NC_009943.1 RefSeq gene 348093 349361 . - . ID=gene-DOLE_RS01530;Name=DOLE_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01530;old_locus_tag=Dole_0304 NC_009943.1 Protein Homology CDS 348093 349361 . - 0 ID=cds-WP_012173733.1;Parent=gene-DOLE_RS01530;Dbxref=Genbank:WP_012173733.1;Name=WP_012173733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876345.1;locus_tag=DOLE_RS01530;product=hypothetical protein;protein_id=WP_012173733.1;transl_table=11 NC_009943.1 RefSeq gene 349426 350103 . - . ID=gene-DOLE_RS01535;Name=DOLE_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01535;old_locus_tag=Dole_0305 NC_009943.1 Protein Homology CDS 349426 350103 . - 0 ID=cds-WP_012173734.1;Parent=gene-DOLE_RS01535;Dbxref=Genbank:WP_012173734.1;Name=WP_012173734.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014176.2;locus_tag=DOLE_RS01535;product=cytochrome c3 family protein;protein_id=WP_012173734.1;transl_table=11 NC_009943.1 RefSeq gene 350375 351739 . + . ID=gene-DOLE_RS01540;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=DOLE_RS01540;old_locus_tag=Dole_0306 NC_009943.1 Protein Homology CDS 350375 351739 . + 0 ID=cds-WP_012173735.1;Parent=gene-DOLE_RS01540;Dbxref=Genbank:WP_012173735.1;Name=WP_012173735.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585988.1;locus_tag=DOLE_RS01540;product=electron transport complex subunit RsxC;protein_id=WP_012173735.1;transl_table=11 NC_009943.1 RefSeq gene 351770 352783 . + . ID=gene-DOLE_RS01545;Name=DOLE_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01545;old_locus_tag=Dole_0307 NC_009943.1 Protein Homology CDS 351770 352783 . + 0 ID=cds-WP_012173736.1;Parent=gene-DOLE_RS01545;Dbxref=Genbank:WP_012173736.1;Name=WP_012173736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878509.1;locus_tag=DOLE_RS01545;product=RnfABCDGE type electron transport complex subunit D;protein_id=WP_012173736.1;transl_table=11 NC_009943.1 RefSeq gene 352828 353427 . + . ID=gene-DOLE_RS01550;Name=DOLE_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01550;old_locus_tag=Dole_0308 NC_009943.1 Protein Homology CDS 352828 353427 . + 0 ID=cds-WP_012173737.1;Parent=gene-DOLE_RS01550;Dbxref=Genbank:WP_012173737.1;Name=WP_012173737.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878508.1;locus_tag=DOLE_RS01550;product=RnfABCDGE type electron transport complex subunit G;protein_id=WP_012173737.1;transl_table=11 NC_009943.1 RefSeq gene 353467 354090 . + . ID=gene-DOLE_RS01555;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=DOLE_RS01555;old_locus_tag=Dole_0309 NC_009943.1 Protein Homology CDS 353467 354090 . + 0 ID=cds-WP_012173738.1;Parent=gene-DOLE_RS01555;Dbxref=Genbank:WP_012173738.1;Name=WP_012173738.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878507.1;locus_tag=DOLE_RS01555;product=electron transport complex subunit RsxE;protein_id=WP_012173738.1;transl_table=11 NC_009943.1 RefSeq gene 354109 354876 . + . ID=gene-DOLE_RS01560;Name=DOLE_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01560;old_locus_tag=Dole_0310 NC_009943.1 Protein Homology CDS 354109 354876 . + 0 ID=cds-WP_012173739.1;Parent=gene-DOLE_RS01560;Dbxref=Genbank:WP_012173739.1;Name=WP_012173739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585984.1;locus_tag=DOLE_RS01560;product=hypothetical protein;protein_id=WP_012173739.1;transl_table=11 NC_009943.1 RefSeq gene 354914 355825 . + . ID=gene-DOLE_RS01565;Name=DOLE_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01565;old_locus_tag=Dole_0311 NC_009943.1 Protein Homology CDS 354914 355825 . + 0 ID=cds-WP_012173740.1;Parent=gene-DOLE_RS01565;Dbxref=Genbank:WP_012173740.1;Name=WP_012173740.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878505.1;locus_tag=DOLE_RS01565;product=RnfABCDGE type electron transport complex subunit B;protein_id=WP_012173740.1;transl_table=11 NC_009943.1 RefSeq gene 356332 356538 . + . ID=gene-DOLE_RS01570;Name=DOLE_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01570;old_locus_tag=Dole_0312 NC_009943.1 GeneMarkS-2+ CDS 356332 356538 . + 0 ID=cds-WP_153304328.1;Parent=gene-DOLE_RS01570;Dbxref=Genbank:WP_153304328.1;Name=WP_153304328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01570;product=hypothetical protein;protein_id=WP_153304328.1;transl_table=11 NC_009943.1 RefSeq gene 356639 358735 . + . ID=gene-DOLE_RS01575;Name=DOLE_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01575;old_locus_tag=Dole_0313 NC_009943.1 Protein Homology CDS 356639 358735 . + 0 ID=cds-WP_012173742.1;Parent=gene-DOLE_RS01575;Dbxref=Genbank:WP_012173742.1;Name=WP_012173742.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903319.1;locus_tag=DOLE_RS01575;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012173742.1;transl_table=11 NC_009943.1 RefSeq gene 359227 361020 . - . ID=gene-DOLE_RS01580;Name=DOLE_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01580;old_locus_tag=Dole_0314 NC_009943.1 Protein Homology CDS 359227 361020 . - 0 ID=cds-WP_012173743.1;Parent=gene-DOLE_RS01580;Dbxref=Genbank:WP_012173743.1;Name=WP_012173743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904720.1;locus_tag=DOLE_RS01580;product=long-chain fatty acid--CoA ligase;protein_id=WP_012173743.1;transl_table=11 NC_009943.1 RefSeq gene 361148 361927 . - . ID=gene-DOLE_RS01585;Name=DOLE_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01585;old_locus_tag=Dole_0315 NC_009943.1 Protein Homology CDS 361148 361927 . - 0 ID=cds-WP_052294324.1;Parent=gene-DOLE_RS01585;Dbxref=Genbank:WP_052294324.1;Name=WP_052294324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949745.1;locus_tag=DOLE_RS01585;product=TatD family hydrolase;protein_id=WP_052294324.1;transl_table=11 NC_009943.1 RefSeq gene 362111 362950 . + . ID=gene-DOLE_RS01590;Name=DOLE_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01590;old_locus_tag=Dole_0316 NC_009943.1 Protein Homology CDS 362111 362950 . + 0 ID=cds-WP_012173745.1;Parent=gene-DOLE_RS01590;Dbxref=Genbank:WP_012173745.1;Name=WP_012173745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663232.1;locus_tag=DOLE_RS01590;product=sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein;protein_id=WP_012173745.1;transl_table=11 NC_009943.1 RefSeq gene 362964 364373 . + . ID=gene-DOLE_RS01595;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=DOLE_RS01595;old_locus_tag=Dole_0317 NC_009943.1 Protein Homology CDS 362964 364373 . + 0 ID=cds-WP_012173746.1;Parent=gene-DOLE_RS01595;Dbxref=Genbank:WP_012173746.1;Name=WP_012173746.1;Ontology_term=GO:0006537,GO:0004355;gbkey=CDS;gene=gltA;go_function=glutamate synthase (NADPH) activity|0004355||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663233.1;locus_tag=DOLE_RS01595;product=NADPH-dependent glutamate synthase;protein_id=WP_012173746.1;transl_table=11 NC_009943.1 RefSeq gene 364570 365001 . - . ID=gene-DOLE_RS01600;Name=DOLE_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01600;old_locus_tag=Dole_0318 NC_009943.1 Protein Homology CDS 364570 365001 . - 0 ID=cds-WP_232362722.1;Parent=gene-DOLE_RS01600;Dbxref=Genbank:WP_232362722.1;Name=WP_232362722.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957221.1;locus_tag=DOLE_RS01600;product=iron-sulfur cluster assembly scaffold protein;protein_id=WP_232362722.1;transl_table=11 NC_009943.1 RefSeq gene 365131 365466 . + . ID=gene-DOLE_RS01605;Name=DOLE_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01605;old_locus_tag=Dole_0319 NC_009943.1 GeneMarkS-2+ CDS 365131 365466 . + 0 ID=cds-WP_012173748.1;Parent=gene-DOLE_RS01605;Dbxref=Genbank:WP_012173748.1;Name=WP_012173748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01605;product=hypothetical protein;protein_id=WP_012173748.1;transl_table=11 NC_009943.1 RefSeq gene 365851 366351 . - . ID=gene-DOLE_RS01610;Name=DOLE_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01610;old_locus_tag=Dole_0320 NC_009943.1 GeneMarkS-2+ CDS 365851 366351 . - 0 ID=cds-WP_012173749.1;Parent=gene-DOLE_RS01610;Dbxref=Genbank:WP_012173749.1;Name=WP_012173749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01610;product=hypothetical protein;protein_id=WP_012173749.1;transl_table=11 NC_009943.1 RefSeq gene 366345 366842 . - . ID=gene-DOLE_RS01615;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=DOLE_RS01615;old_locus_tag=Dole_0321 NC_009943.1 Protein Homology CDS 366345 366842 . - 0 ID=cds-WP_012173750.1;Parent=gene-DOLE_RS01615;Dbxref=Genbank:WP_012173750.1;Name=WP_012173750.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724819.1;locus_tag=DOLE_RS01615;product=signal peptidase I;protein_id=WP_012173750.1;transl_table=11 NC_009943.1 RefSeq gene 367112 368317 . + . ID=gene-DOLE_RS01620;Name=DOLE_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01620;old_locus_tag=Dole_0322 NC_009943.1 Protein Homology CDS 367112 368317 . + 0 ID=cds-WP_012173751.1;Parent=gene-DOLE_RS01620;Dbxref=Genbank:WP_012173751.1;Name=WP_012173751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015724.2;locus_tag=DOLE_RS01620;product=tetratricopeptide repeat protein;protein_id=WP_012173751.1;transl_table=11 NC_009943.1 RefSeq gene 368433 369113 . + . ID=gene-DOLE_RS01625;Name=DOLE_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01625;old_locus_tag=Dole_0323 NC_009943.1 Protein Homology CDS 368433 369113 . + 0 ID=cds-WP_041280291.1;Parent=gene-DOLE_RS01625;Dbxref=Genbank:WP_041280291.1;Name=WP_041280291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015724.2;locus_tag=DOLE_RS01625;product=hypothetical protein;protein_id=WP_041280291.1;transl_table=11 NC_009943.1 RefSeq gene 369395 369853 . - . ID=gene-DOLE_RS01635;Name=DOLE_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01635;old_locus_tag=Dole_0324 NC_009943.1 Protein Homology CDS 369395 369853 . - 0 ID=cds-WP_012173753.1;Parent=gene-DOLE_RS01635;Dbxref=Genbank:WP_012173753.1;Name=WP_012173753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876572.1;locus_tag=DOLE_RS01635;product=metallophosphoesterase family protein;protein_id=WP_012173753.1;transl_table=11 NC_009943.1 RefSeq gene 370299 371519 . + . ID=gene-DOLE_RS01640;Name=DOLE_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01640;old_locus_tag=Dole_0325 NC_009943.1 Protein Homology CDS 370299 371519 . + 0 ID=cds-WP_052294228.1;Parent=gene-DOLE_RS01640;Dbxref=Genbank:WP_052294228.1;Name=WP_052294228.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013180.2;locus_tag=DOLE_RS01640;product=GGDEF domain-containing protein;protein_id=WP_052294228.1;transl_table=11 NC_009943.1 RefSeq gene 371538 371837 . - . ID=gene-DOLE_RS18365;Name=DOLE_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18365 NC_009943.1 Protein Homology CDS 371538 371837 . - 0 ID=cds-WP_052294229.1;Parent=gene-DOLE_RS18365;Dbxref=Genbank:WP_052294229.1;Name=WP_052294229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015925.2;locus_tag=DOLE_RS18365;product=antibiotic biosynthesis monooxygenase;protein_id=WP_052294229.1;transl_table=11 NC_009943.1 RefSeq gene 373133 374032 . + . ID=gene-DOLE_RS01650;Name=DOLE_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01650;old_locus_tag=Dole_0327 NC_009943.1 Protein Homology CDS 373133 374032 . + 0 ID=cds-WP_012173756.1;Parent=gene-DOLE_RS01650;Dbxref=Genbank:WP_012173756.1;Name=WP_012173756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875175.1;locus_tag=DOLE_RS01650;product=exopolyphosphatase;protein_id=WP_012173756.1;transl_table=11 NC_009943.1 RefSeq gene 374161 376653 . - . ID=gene-DOLE_RS01655;Name=DOLE_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01655;old_locus_tag=Dole_0328 NC_009943.1 Protein Homology CDS 374161 376653 . - 0 ID=cds-WP_012173757.1;Parent=gene-DOLE_RS01655;Dbxref=Genbank:WP_012173757.1;Name=WP_012173757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014428.2;locus_tag=DOLE_RS01655;product=Ig-like domain-containing protein;protein_id=WP_012173757.1;transl_table=11 NC_009943.1 RefSeq gene 376692 379646 . - . ID=gene-DOLE_RS16935;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=protein_coding;locus_tag=DOLE_RS16935;old_locus_tag=Dole_0329 NC_009943.1 Protein Homology CDS 376692 379646 . - 0 ID=cds-WP_167320827.1;Parent=gene-DOLE_RS16935;Dbxref=Genbank:WP_167320827.1;Name=WP_167320827.1;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: protein motif:HMM:TIGR02515.1;locus_tag=DOLE_RS16935;product=type IV pilus secretin PilQ;protein_id=WP_167320827.1;transl_table=11 NC_009943.1 RefSeq gene 379659 380630 . - . ID=gene-DOLE_RS01665;Name=DOLE_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01665;old_locus_tag=Dole_0330 NC_009943.1 Protein Homology CDS 379659 380630 . - 0 ID=cds-WP_167320828.1;Parent=gene-DOLE_RS01665;Dbxref=Genbank:WP_167320828.1;Name=WP_167320828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016254.2;locus_tag=DOLE_RS01665;product=pilus assembly protein PilP;protein_id=WP_167320828.1;transl_table=11 NC_009943.1 RefSeq gene 380636 381271 . - . ID=gene-DOLE_RS01670;Name=DOLE_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01670;old_locus_tag=Dole_0331 NC_009943.1 Protein Homology CDS 380636 381271 . - 0 ID=cds-WP_012173760.1;Parent=gene-DOLE_RS01670;Dbxref=Genbank:WP_012173760.1;Name=WP_012173760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016253.2;locus_tag=DOLE_RS01670;product=type 4a pilus biogenesis protein PilO;protein_id=WP_012173760.1;transl_table=11 NC_009943.1 RefSeq gene 381283 381825 . - . ID=gene-DOLE_RS01675;Name=DOLE_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01675;old_locus_tag=Dole_0332 NC_009943.1 Protein Homology CDS 381283 381825 . - 0 ID=cds-WP_012173761.1;Parent=gene-DOLE_RS01675;Dbxref=Genbank:WP_012173761.1;Name=WP_012173761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016992.2;locus_tag=DOLE_RS01675;product=PilN domain-containing protein;protein_id=WP_012173761.1;transl_table=11 NC_009943.1 RefSeq gene 381822 382877 . - . ID=gene-DOLE_RS01680;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=DOLE_RS01680;old_locus_tag=Dole_0333 NC_009943.1 Protein Homology CDS 381822 382877 . - 0 ID=cds-WP_012173762.1;Parent=gene-DOLE_RS01680;Dbxref=Genbank:WP_012173762.1;Name=WP_012173762.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilM;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876759.1;locus_tag=DOLE_RS01680;product=type IV pilus assembly protein PilM;protein_id=WP_012173762.1;transl_table=11 NC_009943.1 RefSeq gene 382887 383087 . - . ID=gene-DOLE_RS01685;Name=DOLE_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01685;old_locus_tag=Dole_0334 NC_009943.1 Protein Homology CDS 382887 383087 . - 0 ID=cds-WP_041280293.1;Parent=gene-DOLE_RS01685;Dbxref=Genbank:WP_041280293.1;Name=WP_041280293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609623.1;locus_tag=DOLE_RS01685;product=helix-turn-helix domain-containing protein;protein_id=WP_041280293.1;transl_table=11 NC_009943.1 RefSeq gene 383454 384140 . + . ID=gene-DOLE_RS16940;Name=DOLE_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16940;old_locus_tag=Dole_0335 NC_009943.1 GeneMarkS-2+ CDS 383454 384140 . + 0 ID=cds-WP_012173764.1;Parent=gene-DOLE_RS16940;Dbxref=Genbank:WP_012173764.1;Name=WP_012173764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16940;product=hypothetical protein;protein_id=WP_012173764.1;transl_table=11 NC_009943.1 RefSeq gene 384318 385205 . - . ID=gene-DOLE_RS01695;Name=DOLE_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01695;old_locus_tag=Dole_0336 NC_009943.1 Protein Homology CDS 384318 385205 . - 0 ID=cds-WP_041280294.1;Parent=gene-DOLE_RS01695;Dbxref=Genbank:WP_041280294.1;Name=WP_041280294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS01695;product=MBL fold metallo-hydrolase;protein_id=WP_041280294.1;transl_table=11 NC_009943.1 RefSeq gene 385329 385724 . + . ID=gene-DOLE_RS18370;Name=DOLE_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18370 NC_009943.1 GeneMarkS-2+ CDS 385329 385724 . + 0 ID=cds-WP_167320829.1;Parent=gene-DOLE_RS18370;Dbxref=Genbank:WP_167320829.1;Name=WP_167320829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18370;product=hypothetical protein;protein_id=WP_167320829.1;transl_table=11 NC_009943.1 RefSeq gene 385983 387716 . + . ID=gene-DOLE_RS01700;Name=DOLE_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01700;old_locus_tag=Dole_0337 NC_009943.1 Protein Homology CDS 385983 387716 . + 0 ID=cds-WP_012173766.1;Parent=gene-DOLE_RS01700;Dbxref=Genbank:WP_012173766.1;Name=WP_012173766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965489.1;locus_tag=DOLE_RS01700;product=long-chain fatty acid--CoA ligase;protein_id=WP_012173766.1;transl_table=11 NC_009943.1 RefSeq gene 388370 388780 . - . ID=gene-DOLE_RS01705;Name=DOLE_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01705;old_locus_tag=Dole_0338 NC_009943.1 GeneMarkS-2+ CDS 388370 388780 . - 0 ID=cds-WP_012173767.1;Parent=gene-DOLE_RS01705;Dbxref=Genbank:WP_012173767.1;Name=WP_012173767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01705;product=hypothetical protein;protein_id=WP_012173767.1;transl_table=11 NC_009943.1 RefSeq gene 388984 390264 . + . ID=gene-DOLE_RS01710;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=DOLE_RS01710;old_locus_tag=Dole_0339 NC_009943.1 Protein Homology CDS 388984 390264 . + 0 ID=cds-WP_012173768.1;Parent=gene-DOLE_RS01710;Dbxref=Genbank:WP_012173768.1;Name=WP_012173768.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173768.1;locus_tag=DOLE_RS01710;product=phosphopyruvate hydratase;protein_id=WP_012173768.1;transl_table=11 NC_009943.1 RefSeq gene 390277 391122 . + . ID=gene-DOLE_RS01715;Name=DOLE_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01715;old_locus_tag=Dole_0340 NC_009943.1 GeneMarkS-2+ CDS 390277 391122 . + 0 ID=cds-WP_012173769.1;Parent=gene-DOLE_RS01715;Dbxref=Genbank:WP_012173769.1;Name=WP_012173769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01715;product=hypothetical protein;protein_id=WP_012173769.1;transl_table=11 NC_009943.1 RefSeq gene 391138 392799 . + . ID=gene-DOLE_RS01720;Name=DOLE_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01720;old_locus_tag=Dole_0341 NC_009943.1 Protein Homology CDS 391138 392799 . + 0 ID=cds-WP_012173770.1;Parent=gene-DOLE_RS01720;Dbxref=Genbank:WP_012173770.1;Name=WP_012173770.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609948.1;locus_tag=DOLE_RS01720;product=CTP synthase;protein_id=WP_012173770.1;transl_table=11 NC_009943.1 RefSeq gene 392834 393523 . + . ID=gene-DOLE_RS01725;Name=DOLE_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01725;old_locus_tag=Dole_0342 NC_009943.1 Protein Homology CDS 392834 393523 . + 0 ID=cds-WP_041280726.1;Parent=gene-DOLE_RS01725;Dbxref=Genbank:WP_041280726.1;Name=WP_041280726.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610772.1;locus_tag=DOLE_RS01725;product=transcriptional repressor;protein_id=WP_041280726.1;transl_table=11 NC_009943.1 RefSeq gene 393693 393929 . + . ID=gene-DOLE_RS01730;Name=DOLE_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01730;old_locus_tag=Dole_0343 NC_009943.1 Protein Homology CDS 393693 393929 . + 0 ID=cds-WP_012173772.1;Parent=gene-DOLE_RS01730;Dbxref=Genbank:WP_012173772.1;Name=WP_012173772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610773.1;locus_tag=DOLE_RS01730;product=FeoA family protein;protein_id=WP_012173772.1;transl_table=11 NC_009943.1 RefSeq gene 393936 396110 . + . ID=gene-DOLE_RS01735;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=DOLE_RS01735;old_locus_tag=Dole_0344 NC_009943.1 Protein Homology CDS 393936 396110 . + 0 ID=cds-WP_012173773.1;Parent=gene-DOLE_RS01735;Dbxref=Genbank:WP_012173773.1;Name=WP_012173773.1;Ontology_term=GO:0006826,GO:0015093;gbkey=CDS;gene=feoB;go_function=ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610774.1;locus_tag=DOLE_RS01735;product=ferrous iron transport protein B;protein_id=WP_012173773.1;transl_table=11 NC_009943.1 RefSeq gene 396241 396867 . + . ID=gene-DOLE_RS01740;Name=DOLE_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01740;old_locus_tag=Dole_0345 NC_009943.1 Protein Homology CDS 396241 396867 . + 0 ID=cds-WP_012173774.1;Parent=gene-DOLE_RS01740;Dbxref=Genbank:WP_012173774.1;Name=WP_012173774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876765.1;locus_tag=DOLE_RS01740;product=metallophosphoesterase family protein;protein_id=WP_012173774.1;transl_table=11 NC_009943.1 RefSeq gene 396889 397338 . + . ID=gene-DOLE_RS01745;Name=DOLE_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01745;old_locus_tag=Dole_0346 NC_009943.1 Protein Homology CDS 396889 397338 . + 0 ID=cds-WP_012173775.1;Parent=gene-DOLE_RS01745;Dbxref=Genbank:WP_012173775.1;Name=WP_012173775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018095.2;locus_tag=DOLE_RS01745;product=SH3 domain-containing protein;protein_id=WP_012173775.1;transl_table=11 NC_009943.1 RefSeq gene 397460 398983 . - . ID=gene-DOLE_RS01750;Name=DOLE_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01750;old_locus_tag=Dole_0347 NC_009943.1 Protein Homology CDS 397460 398983 . - 0 ID=cds-WP_012173776.1;Parent=gene-DOLE_RS01750;Dbxref=Genbank:WP_012173776.1;Name=WP_012173776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956261.1;locus_tag=DOLE_RS01750;product=4Fe-4S binding protein;protein_id=WP_012173776.1;transl_table=11 NC_009943.1 RefSeq gene 399063 399977 . - . ID=gene-DOLE_RS01755;Name=DOLE_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01755;old_locus_tag=Dole_0348 NC_009943.1 Protein Homology CDS 399063 399977 . - 0 ID=cds-WP_012173777.1;Parent=gene-DOLE_RS01755;Dbxref=Genbank:WP_012173777.1;Name=WP_012173777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724794.1;locus_tag=DOLE_RS01755;product=DUF362 domain-containing protein;protein_id=WP_012173777.1;transl_table=11 NC_009943.1 RefSeq gene 400007 401977 . - . ID=gene-DOLE_RS01760;Name=DOLE_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01760;old_locus_tag=Dole_0349 NC_009943.1 Protein Homology CDS 400007 401977 . - 0 ID=cds-WP_012173778.1;Parent=gene-DOLE_RS01760;Dbxref=Genbank:WP_012173778.1;Name=WP_012173778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014414.2;locus_tag=DOLE_RS01760;product=DUF1365 family protein;protein_id=WP_012173778.1;transl_table=11 NC_009943.1 RefSeq gene 401974 403245 . - . ID=gene-DOLE_RS01765;Name=DOLE_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01765;old_locus_tag=Dole_0350 NC_009943.1 Protein Homology CDS 401974 403245 . - 0 ID=cds-WP_012173779.1;Parent=gene-DOLE_RS01765;Dbxref=Genbank:WP_012173779.1;Name=WP_012173779.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013739.2;locus_tag=DOLE_RS01765;product=FAD-dependent oxidoreductase;protein_id=WP_012173779.1;transl_table=11 NC_009943.1 RefSeq gene 403266 403676 . - . ID=gene-DOLE_RS01770;Name=DOLE_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01770;old_locus_tag=Dole_0351 NC_009943.1 Protein Homology CDS 403266 403676 . - 0 ID=cds-WP_012173780.1;Parent=gene-DOLE_RS01770;Dbxref=Genbank:WP_012173780.1;Name=WP_012173780.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021462.2;locus_tag=DOLE_RS01770;product=DUF2177 family protein;protein_id=WP_012173780.1;transl_table=11 NC_009943.1 RefSeq gene 403690 404478 . - . ID=gene-DOLE_RS01775;Name=DOLE_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01775;old_locus_tag=Dole_0352 NC_009943.1 Protein Homology CDS 403690 404478 . - 0 ID=cds-WP_153304330.1;Parent=gene-DOLE_RS01775;Dbxref=Genbank:WP_153304330.1;Name=WP_153304330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018649.2;locus_tag=DOLE_RS01775;product=DUF1295 domain-containing protein;protein_id=WP_153304330.1;transl_table=11 NC_009943.1 RefSeq gene 404494 405888 . - . ID=gene-DOLE_RS01780;Name=DOLE_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01780;old_locus_tag=Dole_0353 NC_009943.1 Protein Homology CDS 404494 405888 . - 0 ID=cds-WP_012173782.1;Parent=gene-DOLE_RS01780;Dbxref=Genbank:WP_012173782.1;Name=WP_012173782.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073441.1;locus_tag=DOLE_RS01780;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_012173782.1;transl_table=11 NC_009943.1 RefSeq gene 405885 406475 . - . ID=gene-DOLE_RS01785;Name=DOLE_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01785;old_locus_tag=Dole_0354 NC_009943.1 Protein Homology CDS 405885 406475 . - 0 ID=cds-WP_012173783.1;Parent=gene-DOLE_RS01785;Dbxref=Genbank:WP_012173783.1;Name=WP_012173783.1;Ontology_term=GO:0016872;gbkey=CDS;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: protein motif:HMM:NF027363.2;locus_tag=DOLE_RS01785;product=chalcone isomerase family protein;protein_id=WP_012173783.1;transl_table=11 NC_009943.1 RefSeq gene 406920 407231 . + . ID=gene-DOLE_RS01790;Name=DOLE_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01790;old_locus_tag=Dole_0355 NC_009943.1 Protein Homology CDS 406920 407231 . + 0 ID=cds-WP_012173784.1;Parent=gene-DOLE_RS01790;Dbxref=Genbank:WP_012173784.1;Name=WP_012173784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949578.1;locus_tag=DOLE_RS01790;product=hypothetical protein;protein_id=WP_012173784.1;transl_table=11 NC_009943.1 RefSeq gene 407493 408407 . + . ID=gene-DOLE_RS01795;Name=DOLE_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01795;old_locus_tag=Dole_0356 NC_009943.1 Protein Homology CDS 407493 408407 . + 0 ID=cds-WP_012173785.1;Parent=gene-DOLE_RS01795;Dbxref=Genbank:WP_012173785.1;Name=WP_012173785.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013087.2;locus_tag=DOLE_RS01795;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_012173785.1;transl_table=11 NC_009943.1 RefSeq gene 408827 410095 . + . ID=gene-DOLE_RS01800;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=DOLE_RS01800;old_locus_tag=Dole_0357 NC_009943.1 Protein Homology CDS 408827 410095 . + 0 ID=cds-WP_012173786.1;Parent=gene-DOLE_RS01800;Dbxref=Genbank:WP_012173786.1;Name=WP_012173786.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: protein motif:HMM:NF004005.0;locus_tag=DOLE_RS01800;product=adenosylhomocysteinase;protein_id=WP_012173786.1;transl_table=11 NC_009943.1 RefSeq gene 410474 411991 . + . ID=gene-DOLE_RS01805;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=DOLE_RS01805;old_locus_tag=Dole_0358 NC_009943.1 Protein Homology CDS 410474 411991 . + 0 ID=cds-WP_012173787.1;Parent=gene-DOLE_RS01805;Dbxref=Genbank:WP_012173787.1;Name=WP_012173787.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: protein motif:HMM:TIGR00546.1;locus_tag=DOLE_RS01805;product=apolipoprotein N-acyltransferase;protein_id=WP_012173787.1;transl_table=11 NC_009943.1 RefSeq gene 411968 413062 . - . ID=gene-DOLE_RS01810;Name=DOLE_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01810;old_locus_tag=Dole_0359 NC_009943.1 Protein Homology CDS 411968 413062 . - 0 ID=cds-WP_012173788.1;Parent=gene-DOLE_RS01810;Dbxref=Genbank:WP_012173788.1;Name=WP_012173788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015252.2;locus_tag=DOLE_RS01810;product=lipase chaperone family protein;protein_id=WP_012173788.1;transl_table=11 NC_009943.1 RefSeq gene 413137 414036 . - . ID=gene-DOLE_RS01815;Name=DOLE_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01815;old_locus_tag=Dole_0360 NC_009943.1 Protein Homology CDS 413137 414036 . - 0 ID=cds-WP_012173789.1;Parent=gene-DOLE_RS01815;Dbxref=Genbank:WP_012173789.1;Name=WP_012173789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949465.1;locus_tag=DOLE_RS01815;product=alpha/beta hydrolase;protein_id=WP_012173789.1;transl_table=11 NC_009943.1 RefSeq gene 414248 416293 . + . ID=gene-DOLE_RS01820;Name=DOLE_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01820;old_locus_tag=Dole_0361 NC_009943.1 Protein Homology CDS 414248 416293 . + 0 ID=cds-WP_012173790.1;Parent=gene-DOLE_RS01820;Dbxref=Genbank:WP_012173790.1;Name=WP_012173790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176539.1;locus_tag=DOLE_RS01820;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012173790.1;transl_table=11 NC_009943.1 RefSeq gene 416327 417550 . + . ID=gene-DOLE_RS01825;Name=DOLE_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01825;old_locus_tag=Dole_0362 NC_009943.1 Protein Homology CDS 416327 417550 . + 0 ID=cds-WP_012173791.1;Parent=gene-DOLE_RS01825;Dbxref=Genbank:WP_012173791.1;Name=WP_012173791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586573.1;locus_tag=DOLE_RS01825;product=MFS transporter;protein_id=WP_012173791.1;transl_table=11 NC_009943.1 RefSeq gene 417621 420425 . - . ID=gene-DOLE_RS01830;Name=DOLE_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01830;old_locus_tag=Dole_0363 NC_009943.1 Protein Homology CDS 417621 420425 . - 0 ID=cds-WP_012173792.1;Parent=gene-DOLE_RS01830;Dbxref=Genbank:WP_012173792.1;Name=WP_012173792.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024627.2;locus_tag=DOLE_RS01830;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_012173792.1;transl_table=11 NC_009943.1 RefSeq gene 420485 421813 . - . ID=gene-DOLE_RS01835;Name=DOLE_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01835;old_locus_tag=Dole_0364 NC_009943.1 Protein Homology CDS 420485 421813 . - 0 ID=cds-WP_012173793.1;Parent=gene-DOLE_RS01835;Dbxref=Genbank:WP_012173793.1;Name=WP_012173793.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015948.2;locus_tag=DOLE_RS01835;product=DUF362 domain-containing protein;protein_id=WP_012173793.1;transl_table=11 NC_009943.1 RefSeq gene 422177 423046 . + . ID=gene-DOLE_RS01840;Name=DOLE_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01840;old_locus_tag=Dole_0365 NC_009943.1 Protein Homology CDS 422177 423046 . + 0 ID=cds-WP_012173794.1;Parent=gene-DOLE_RS01840;Dbxref=Genbank:WP_012173794.1;Name=WP_012173794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610048.1;locus_tag=DOLE_RS01840;product=radical SAM protein;protein_id=WP_012173794.1;transl_table=11 NC_009943.1 RefSeq gene 423151 423582 . + . ID=gene-DOLE_RS17805;Name=DOLE_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17805;old_locus_tag=Dole_0366 NC_009943.1 Protein Homology CDS 423151 423582 . + 0 ID=cds-WP_012173795.1;Parent=gene-DOLE_RS17805;Dbxref=Genbank:WP_012173795.1;Name=WP_012173795.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017451.2;locus_tag=DOLE_RS17805;product=four helix bundle protein;protein_id=WP_012173795.1;transl_table=11 NC_009943.1 RefSeq gene 423656 425671 . + . ID=gene-DOLE_RS01850;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=DOLE_RS01850;old_locus_tag=Dole_0367 NC_009943.1 Protein Homology CDS 423656 425671 . + 0 ID=cds-WP_012173796.1;Parent=gene-DOLE_RS01850;Dbxref=Genbank:WP_012173796.1;Name=WP_012173796.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906570.1;locus_tag=DOLE_RS01850;product=transketolase;protein_id=WP_012173796.1;transl_table=11 NC_009943.1 RefSeq gene 425698 426462 . + . ID=gene-DOLE_RS01855;Name=DOLE_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01855;old_locus_tag=Dole_0368 NC_009943.1 Protein Homology CDS 425698 426462 . + 0 ID=cds-WP_012173797.1;Parent=gene-DOLE_RS01855;Dbxref=Genbank:WP_012173797.1;Name=WP_012173797.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF019846.2;locus_tag=DOLE_RS01855;product=methyltransferase domain-containing protein;protein_id=WP_012173797.1;transl_table=11 NC_009943.1 RefSeq gene 426552 427478 . - . ID=gene-DOLE_RS01860;Name=DOLE_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01860;old_locus_tag=Dole_0369 NC_009943.1 Protein Homology CDS 426552 427478 . - 0 ID=cds-WP_012173798.1;Parent=gene-DOLE_RS01860;Dbxref=Genbank:WP_012173798.1;Name=WP_012173798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959707.1;locus_tag=DOLE_RS01860;product=helix-turn-helix transcriptional regulator;protein_id=WP_012173798.1;transl_table=11 NC_009943.1 RefSeq gene 427693 428667 . + . ID=gene-DOLE_RS01865;Name=DOLE_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01865;old_locus_tag=Dole_0370 NC_009943.1 Protein Homology CDS 427693 428667 . + 0 ID=cds-WP_012173799.1;Parent=gene-DOLE_RS01865;Dbxref=Genbank:WP_012173799.1;Name=WP_012173799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876101.1;locus_tag=DOLE_RS01865;product=DHH family phosphoesterase;protein_id=WP_012173799.1;transl_table=11 NC_009943.1 RefSeq gene 428881 429621 . - . ID=gene-DOLE_RS01870;Name=DOLE_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01870;old_locus_tag=Dole_0371 NC_009943.1 Protein Homology CDS 428881 429621 . - 0 ID=cds-WP_012173800.1;Parent=gene-DOLE_RS01870;Dbxref=Genbank:WP_012173800.1;Name=WP_012173800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173800.1;locus_tag=DOLE_RS01870;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_012173800.1;transl_table=11 NC_009943.1 RefSeq gene 429608 430231 . - . ID=gene-DOLE_RS01875;Name=DOLE_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01875;old_locus_tag=Dole_0372 NC_009943.1 Protein Homology CDS 429608 430231 . - 0 ID=cds-WP_012173801.1;Parent=gene-DOLE_RS01875;Dbxref=Genbank:WP_012173801.1;Name=WP_012173801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173801.1;locus_tag=DOLE_RS01875;product=RlmE family RNA methyltransferase;protein_id=WP_012173801.1;transl_table=11 NC_009943.1 RefSeq gene 430413 431771 . - . ID=gene-DOLE_RS01880;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=DOLE_RS01880;old_locus_tag=Dole_0373 NC_009943.1 Protein Homology CDS 430413 431771 . - 0 ID=cds-WP_012173802.1;Parent=gene-DOLE_RS01880;Dbxref=Genbank:WP_012173802.1;Name=WP_012173802.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725909.1;locus_tag=DOLE_RS01880;product=DNA repair protein RadA;protein_id=WP_012173802.1;transl_table=11 NC_009943.1 RefSeq gene 431768 431989 . - . ID=gene-DOLE_RS18115;Name=DOLE_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18115 NC_009943.1 GeneMarkS-2+ CDS 431768 431989 . - 0 ID=cds-WP_153304331.1;Parent=gene-DOLE_RS18115;Dbxref=Genbank:WP_153304331.1;Name=WP_153304331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18115;product=hypothetical protein;protein_id=WP_153304331.1;transl_table=11 NC_009943.1 RefSeq gene 432109 432783 . + . ID=gene-DOLE_RS01885;Name=DOLE_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01885;old_locus_tag=Dole_0374 NC_009943.1 Protein Homology CDS 432109 432783 . + 0 ID=cds-WP_012173803.1;Parent=gene-DOLE_RS01885;Dbxref=Genbank:WP_012173803.1;Name=WP_012173803.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875463.1;locus_tag=DOLE_RS01885;product=XTP/dITP diphosphatase;protein_id=WP_012173803.1;transl_table=11 NC_009943.1 RefSeq gene 432755 433345 . + . ID=gene-DOLE_RS01890;Name=DOLE_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01890;old_locus_tag=Dole_0375 NC_009943.1 Protein Homology CDS 432755 433345 . + 0 ID=cds-WP_012173804.1;Parent=gene-DOLE_RS01890;Dbxref=Genbank:WP_012173804.1;Name=WP_012173804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956565.1;locus_tag=DOLE_RS01890;product=nitroreductase family protein;protein_id=WP_012173804.1;transl_table=11 NC_009943.1 RefSeq gene 433422 435371 . + . ID=gene-DOLE_RS01895;Name=DOLE_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01895;old_locus_tag=Dole_0376 NC_009943.1 Protein Homology CDS 433422 435371 . + 0 ID=cds-WP_012173805.1;Parent=gene-DOLE_RS01895;Dbxref=Genbank:WP_012173805.1;Name=WP_012173805.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965510.1;locus_tag=DOLE_RS01895;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_012173805.1;transl_table=11 NC_009943.1 RefSeq gene 435563 437083 . + . ID=gene-DOLE_RS01900;Name=DOLE_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01900;old_locus_tag=Dole_0377 NC_009943.1 Protein Homology CDS 435563 437083 . + 0 ID=cds-WP_012173806.1;Parent=gene-DOLE_RS01900;Dbxref=Genbank:WP_012173806.1;Name=WP_012173806.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=DOLE_RS01900;product=MFS transporter;protein_id=WP_012173806.1;transl_table=11 NC_009943.1 RefSeq gene 437232 438944 . + . ID=gene-DOLE_RS01905;Name=DOLE_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01905;old_locus_tag=Dole_0378 NC_009943.1 Protein Homology CDS 437232 438944 . + 0 ID=cds-WP_012173807.1;Parent=gene-DOLE_RS01905;Dbxref=Genbank:WP_012173807.1;Name=WP_012173807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039677.1;locus_tag=DOLE_RS01905;product=DUF6178 family protein;protein_id=WP_012173807.1;transl_table=11 NC_009943.1 RefSeq gene 439399 440295 . - . ID=gene-DOLE_RS01910;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=DOLE_RS01910;old_locus_tag=Dole_0379 NC_009943.1 Protein Homology CDS 439399 440295 . - 0 ID=cds-WP_012173808.1;Parent=gene-DOLE_RS01910;Dbxref=Genbank:WP_012173808.1;Name=WP_012173808.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967019.1;locus_tag=DOLE_RS01910;product=quinolinate synthase NadA;protein_id=WP_012173808.1;transl_table=11 NC_009943.1 RefSeq gene 440292 440981 . - . ID=gene-DOLE_RS01915;Name=DOLE_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01915;old_locus_tag=Dole_0380 NC_009943.1 Protein Homology CDS 440292 440981 . - 0 ID=cds-WP_012173809.1;Parent=gene-DOLE_RS01915;Dbxref=Genbank:WP_012173809.1;Name=WP_012173809.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015510.2;locus_tag=DOLE_RS01915;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_012173809.1;transl_table=11 NC_009943.1 RefSeq gene 441315 441731 . + . ID=gene-DOLE_RS01920;Name=DOLE_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01920;old_locus_tag=Dole_0381 NC_009943.1 Protein Homology CDS 441315 441731 . + 0 ID=cds-WP_012173810.1;Parent=gene-DOLE_RS01920;Dbxref=Genbank:WP_012173810.1;Name=WP_012173810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948454.1;locus_tag=DOLE_RS01920;product=DUF3842 family protein;protein_id=WP_012173810.1;transl_table=11 NC_009943.1 RefSeq gene 441735 441929 . + . ID=gene-DOLE_RS01925;Name=DOLE_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01925;old_locus_tag=Dole_0382 NC_009943.1 Protein Homology CDS 441735 441929 . + 0 ID=cds-WP_012173811.1;Parent=gene-DOLE_RS01925;Dbxref=Genbank:WP_012173811.1;Name=WP_012173811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948453.1;locus_tag=DOLE_RS01925;product=CooT family nickel-binding protein;protein_id=WP_012173811.1;transl_table=11 NC_009943.1 RefSeq gene 442006 443739 . + . ID=gene-DOLE_RS01930;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=DOLE_RS01930;old_locus_tag=Dole_0383 NC_009943.1 Protein Homology CDS 442006 443739 . + 0 ID=cds-WP_012173812.1;Parent=gene-DOLE_RS01930;Dbxref=Genbank:WP_012173812.1;Name=WP_012173812.1;Ontology_term=GO:0009240,GO:0015968,GO:0046677,GO:0051745;gbkey=CDS;gene=ispH;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process|0009240||IEA,stringent response|0015968||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876990.1;locus_tag=DOLE_RS01930;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_012173812.1;transl_table=11 NC_009943.1 RefSeq gene 444062 444691 . - . ID=gene-DOLE_RS01935;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=DOLE_RS01935;old_locus_tag=Dole_0384 NC_009943.1 Protein Homology CDS 444062 444691 . - 0 ID=cds-WP_012173813.1;Parent=gene-DOLE_RS01935;Dbxref=Genbank:WP_012173813.1;Name=WP_012173813.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: protein motif:HMM:TIGR00023.1;locus_tag=DOLE_RS01935;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_012173813.1;transl_table=11 NC_009943.1 RefSeq gene 444894 445187 . + . ID=gene-DOLE_RS01940;Name=DOLE_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01940;old_locus_tag=Dole_0385 NC_009943.1 Protein Homology CDS 444894 445187 . + 0 ID=cds-WP_041280297.1;Parent=gene-DOLE_RS01940;Dbxref=Genbank:WP_041280297.1;Name=WP_041280297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610812.1;locus_tag=DOLE_RS01940;product=Smr/MutS family protein;protein_id=WP_041280297.1;transl_table=11 NC_009943.1 RefSeq gene 445209 445601 . + . ID=gene-DOLE_RS01945;Name=DOLE_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01945;old_locus_tag=Dole_0386 NC_009943.1 Protein Homology CDS 445209 445601 . + 0 ID=cds-WP_012173815.1;Parent=gene-DOLE_RS01945;Dbxref=Genbank:WP_012173815.1;Name=WP_012173815.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: protein motif:HMM:TIGR00369.1;locus_tag=DOLE_RS01945;product=hotdog fold thioesterase;protein_id=WP_012173815.1;transl_table=11 NC_009943.1 RefSeq gene 445891 446073 . - . ID=gene-DOLE_RS01950;Name=DOLE_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01950;old_locus_tag=Dole_0387 NC_009943.1 GeneMarkS-2+ CDS 445891 446073 . - 0 ID=cds-WP_012173816.1;Parent=gene-DOLE_RS01950;Dbxref=Genbank:WP_012173816.1;Name=WP_012173816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01950;product=hypothetical protein;protein_id=WP_012173816.1;transl_table=11 NC_009943.1 RefSeq gene 446410 447612 . + . ID=gene-DOLE_RS01955;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=DOLE_RS01955;old_locus_tag=Dole_0388 NC_009943.1 Protein Homology CDS 446410 447612 . + 0 ID=cds-WP_012173817.1;Parent=gene-DOLE_RS01955;Dbxref=Genbank:WP_012173817.1;Name=WP_012173817.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: protein motif:HMM:NF003704.0;locus_tag=DOLE_RS01955;product=nicotinate phosphoribosyltransferase;protein_id=WP_012173817.1;transl_table=11 NC_009943.1 RefSeq gene 447704 448603 . + . ID=gene-DOLE_RS01960;Name=DOLE_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01960;old_locus_tag=Dole_0389 NC_009943.1 Protein Homology CDS 447704 448603 . + 0 ID=cds-WP_012173818.1;Parent=gene-DOLE_RS01960;Dbxref=Genbank:WP_012173818.1;Name=WP_012173818.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024798.2;locus_tag=DOLE_RS01960;product=lytic murein transglycosylase;protein_id=WP_012173818.1;transl_table=11 NC_009943.1 RefSeq gene 448625 448843 . + . ID=gene-DOLE_RS01965;Name=DOLE_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01965;old_locus_tag=Dole_0390 NC_009943.1 Protein Homology CDS 448625 448843 . + 0 ID=cds-WP_012173819.1;Parent=gene-DOLE_RS01965;Dbxref=Genbank:WP_012173819.1;Name=WP_012173819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662763.1;locus_tag=DOLE_RS01965;product=PLDc N-terminal domain-containing protein;protein_id=WP_012173819.1;transl_table=11 NC_009943.1 RefSeq gene 448840 449562 . + . ID=gene-DOLE_RS01970;Name=DOLE_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01970;old_locus_tag=Dole_0391 NC_009943.1 Protein Homology CDS 448840 449562 . + 0 ID=cds-WP_012173820.1;Parent=gene-DOLE_RS01970;Dbxref=Genbank:WP_012173820.1;Name=WP_012173820.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: protein motif:HMM:TIGR00121.1;locus_tag=DOLE_RS01970;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_012173820.1;transl_table=11 NC_009943.1 RefSeq gene 450472 452979 . + . ID=gene-DOLE_RS01975;Name=DOLE_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01975;old_locus_tag=Dole_0392 NC_009943.1 Protein Homology CDS 450472 452979 . + 0 ID=cds-WP_167320830.1;Parent=gene-DOLE_RS01975;Dbxref=Genbank:WP_167320830.1;Name=WP_167320830.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF015155.2;locus_tag=DOLE_RS01975;product=MMPL family transporter;protein_id=WP_167320830.1;transl_table=11 NC_009943.1 RefSeq gene 453039 453884 . + . ID=gene-DOLE_RS01980;Name=DOLE_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01980;old_locus_tag=Dole_0393 NC_009943.1 GeneMarkS-2+ CDS 453039 453884 . + 0 ID=cds-WP_012173822.1;Parent=gene-DOLE_RS01980;Dbxref=Genbank:WP_012173822.1;Name=WP_012173822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01980;product=hypothetical protein;protein_id=WP_012173822.1;transl_table=11 NC_009943.1 RefSeq gene 453936 455579 . + . ID=gene-DOLE_RS01985;Name=DOLE_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01985;old_locus_tag=Dole_0394 NC_009943.1 Protein Homology CDS 453936 455579 . + 0 ID=cds-WP_012173823.1;Parent=gene-DOLE_RS01985;Dbxref=Genbank:WP_012173823.1;Name=WP_012173823.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015291.2;locus_tag=DOLE_RS01985;product=GH3 auxin-responsive promoter family protein;protein_id=WP_012173823.1;transl_table=11 NC_009943.1 RefSeq gene 455692 457065 . + . ID=gene-DOLE_RS01990;Name=DOLE_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01990;old_locus_tag=Dole_0395 NC_009943.1 GeneMarkS-2+ CDS 455692 457065 . + 0 ID=cds-WP_012173824.1;Parent=gene-DOLE_RS01990;Dbxref=Genbank:WP_012173824.1;Name=WP_012173824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS01990;product=hypothetical protein;protein_id=WP_012173824.1;transl_table=11 NC_009943.1 RefSeq gene 457317 458156 . + . ID=gene-DOLE_RS01995;Name=DOLE_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS01995;old_locus_tag=Dole_0396 NC_009943.1 Protein Homology CDS 457317 458156 . + 0 ID=cds-WP_012173825.1;Parent=gene-DOLE_RS01995;Dbxref=Genbank:WP_012173825.1;Name=WP_012173825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028441.2;locus_tag=DOLE_RS01995;product=outer membrane lipoprotein-sorting protein;protein_id=WP_012173825.1;transl_table=11 NC_009943.1 RefSeq gene 458313 458954 . + . ID=gene-DOLE_RS02000;Name=DOLE_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02000;old_locus_tag=Dole_0397 NC_009943.1 GeneMarkS-2+ CDS 458313 458954 . + 0 ID=cds-WP_012173826.1;Parent=gene-DOLE_RS02000;Dbxref=Genbank:WP_012173826.1;Name=WP_012173826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02000;product=hypothetical protein;protein_id=WP_012173826.1;transl_table=11 NC_009943.1 RefSeq gene 459063 459893 . - . ID=gene-DOLE_RS02005;Name=DOLE_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02005;old_locus_tag=Dole_0398 NC_009943.1 GeneMarkS-2+ CDS 459063 459893 . - 0 ID=cds-WP_012173827.1;Parent=gene-DOLE_RS02005;Dbxref=Genbank:WP_012173827.1;Name=WP_012173827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02005;product=aldo/keto reductase;protein_id=WP_012173827.1;transl_table=11 NC_009943.1 RefSeq gene 460029 461102 . + . ID=gene-DOLE_RS02010;Name=DOLE_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02010;old_locus_tag=Dole_0399 NC_009943.1 GeneMarkS-2+ CDS 460029 461102 . + 0 ID=cds-WP_012173828.1;Parent=gene-DOLE_RS02010;Dbxref=Genbank:WP_012173828.1;Name=WP_012173828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02010;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_012173828.1;transl_table=11 NC_009943.1 RefSeq gene 461221 462096 . + . ID=gene-DOLE_RS02015;Name=DOLE_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02015;old_locus_tag=Dole_0400 NC_009943.1 Protein Homology CDS 461221 462096 . + 0 ID=cds-WP_041280298.1;Parent=gene-DOLE_RS02015;Dbxref=Genbank:WP_041280298.1;Name=WP_041280298.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004075457.1;locus_tag=DOLE_RS02015;product=zinc ABC transporter substrate-binding protein;protein_id=WP_041280298.1;transl_table=11 NC_009943.1 RefSeq gene 462093 462866 . + . ID=gene-DOLE_RS02020;Name=DOLE_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02020;old_locus_tag=Dole_0401 NC_009943.1 Protein Homology CDS 462093 462866 . + 0 ID=cds-WP_012173830.1;Parent=gene-DOLE_RS02020;Dbxref=Genbank:WP_012173830.1;Name=WP_012173830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004075458.1;locus_tag=DOLE_RS02020;product=ABC transporter ATP-binding protein;protein_id=WP_012173830.1;transl_table=11 NC_009943.1 RefSeq gene 462871 463692 . + . ID=gene-DOLE_RS02025;Name=DOLE_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02025;old_locus_tag=Dole_0402 NC_009943.1 Protein Homology CDS 462871 463692 . + 0 ID=cds-WP_012173831.1;Parent=gene-DOLE_RS02025;Dbxref=Genbank:WP_012173831.1;Name=WP_012173831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403304.1;locus_tag=DOLE_RS02025;product=metal ABC transporter permease;protein_id=WP_012173831.1;transl_table=11 NC_009943.1 RefSeq gene 464078 464404 . - . ID=gene-DOLE_RS02030;Name=DOLE_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02030;old_locus_tag=Dole_0403 NC_009943.1 GeneMarkS-2+ CDS 464078 464404 . - 0 ID=cds-WP_012173832.1;Parent=gene-DOLE_RS02030;Dbxref=Genbank:WP_012173832.1;Name=WP_012173832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02030;product=zinc ribbon domain-containing protein;protein_id=WP_012173832.1;transl_table=11 NC_009943.1 RefSeq gene 464425 465897 . - . ID=gene-DOLE_RS02035;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=DOLE_RS02035;old_locus_tag=Dole_0404 NC_009943.1 Protein Homology CDS 464425 465897 . - 0 ID=cds-WP_012173833.1;Parent=gene-DOLE_RS02035;Dbxref=Genbank:WP_012173833.1;Name=WP_012173833.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: protein motif:HMM:NF014575.2;locus_tag=DOLE_RS02035;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_012173833.1;transl_table=11 NC_009943.1 RefSeq gene 465921 466697 . + . ID=gene-DOLE_RS02040;Name=DOLE_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02040;old_locus_tag=Dole_0405 NC_009943.1 Protein Homology CDS 465921 466697 . + 0 ID=cds-WP_012173834.1;Parent=gene-DOLE_RS02040;Dbxref=Genbank:WP_012173834.1;Name=WP_012173834.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013045.2;locus_tag=DOLE_RS02040;product=RluA family pseudouridine synthase;protein_id=WP_012173834.1;transl_table=11 NC_009943.1 RefSeq gene 467448 469235 . - . ID=gene-DOLE_RS02045;Name=DOLE_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02045;old_locus_tag=Dole_0407 NC_009943.1 Protein Homology CDS 467448 469235 . - 0 ID=cds-WP_012173836.1;Parent=gene-DOLE_RS02045;Dbxref=Genbank:WP_012173836.1;Name=WP_012173836.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723432.1;locus_tag=DOLE_RS02045;product=YgiQ family radical SAM protein;protein_id=WP_012173836.1;transl_table=11 NC_009943.1 RefSeq gene 469645 470103 . + . ID=gene-DOLE_RS02050;Name=DOLE_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02050;old_locus_tag=Dole_0408 NC_009943.1 GeneMarkS-2+ CDS 469645 470103 . + 0 ID=cds-WP_012173837.1;Parent=gene-DOLE_RS02050;Dbxref=Genbank:WP_012173837.1;Name=WP_012173837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02050;product=hypothetical protein;protein_id=WP_012173837.1;transl_table=11 NC_009943.1 RefSeq gene 470069 471601 . + . ID=gene-DOLE_RS16945;Name=DOLE_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16945;old_locus_tag=Dole_0409 NC_009943.1 Protein Homology CDS 470069 471601 . + 0 ID=cds-WP_083766500.1;Parent=gene-DOLE_RS16945;Dbxref=Genbank:WP_083766500.1;Name=WP_083766500.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015094.2;locus_tag=DOLE_RS16945;product=AarF/UbiB family protein;protein_id=WP_083766500.1;transl_table=11 NC_009943.1 RefSeq gene 471818 472009 . + . ID=gene-DOLE_RS02060;Name=DOLE_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02060;old_locus_tag=Dole_0410 NC_009943.1 Protein Homology CDS 471818 472009 . + 0 ID=cds-WP_012173839.1;Parent=gene-DOLE_RS02060;Dbxref=Genbank:WP_012173839.1;Name=WP_012173839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021474.2;locus_tag=DOLE_RS02060;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_012173839.1;transl_table=11 NC_009943.1 RefSeq gene 472016 472393 . + . ID=gene-DOLE_RS02065;Name=DOLE_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02065;old_locus_tag=Dole_0411 NC_009943.1 Protein Homology CDS 472016 472393 . + 0 ID=cds-WP_012173840.1;Parent=gene-DOLE_RS02065;Dbxref=Genbank:WP_012173840.1;Name=WP_012173840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964189.1;locus_tag=DOLE_RS02065;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012173840.1;transl_table=11 NC_009943.1 RefSeq gene 472786 474171 . + . ID=gene-DOLE_RS02070;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=DOLE_RS02070;old_locus_tag=Dole_0412 NC_009943.1 Protein Homology CDS 472786 474171 . + 0 ID=cds-WP_012173841.1;Parent=gene-DOLE_RS02070;Dbxref=Genbank:WP_012173841.1;Name=WP_012173841.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949440.1;locus_tag=DOLE_RS02070;product=magnesium transporter;protein_id=WP_012173841.1;transl_table=11 NC_009943.1 RefSeq gene 474524 475873 . + . ID=gene-DOLE_RS02075;Name=DOLE_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02075;old_locus_tag=Dole_0413 NC_009943.1 Protein Homology CDS 474524 475873 . + 0 ID=cds-WP_012173842.1;Parent=gene-DOLE_RS02075;Dbxref=Genbank:WP_012173842.1;Name=WP_012173842.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013703.2;locus_tag=DOLE_RS02075;product=MATE family efflux transporter;protein_id=WP_012173842.1;transl_table=11 NC_009943.1 RefSeq gene 476184 477779 . + . ID=gene-DOLE_RS02080;Name=DOLE_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02080;old_locus_tag=Dole_0414 NC_009943.1 Protein Homology CDS 476184 477779 . + 0 ID=cds-WP_012173843.1;Parent=gene-DOLE_RS02080;Dbxref=Genbank:WP_012173843.1;Name=WP_012173843.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073477.1;locus_tag=DOLE_RS02080;product=peptide chain release factor 3;protein_id=WP_012173843.1;transl_table=11 NC_009943.1 RefSeq gene 477923 479095 . - . ID=gene-DOLE_RS02085;Name=DOLE_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02085;old_locus_tag=Dole_0415 NC_009943.1 Protein Homology CDS 477923 479095 . - 0 ID=cds-WP_012173844.1;Parent=gene-DOLE_RS02085;Dbxref=Genbank:WP_012173844.1;Name=WP_012173844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009379123.1;locus_tag=DOLE_RS02085;product=Fic family protein;protein_id=WP_012173844.1;transl_table=11 NC_009943.1 RefSeq gene 479304 480314 . - . ID=gene-DOLE_RS02090;Name=DOLE_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02090;old_locus_tag=Dole_0416 NC_009943.1 Protein Homology CDS 479304 480314 . - 0 ID=cds-WP_012173845.1;Parent=gene-DOLE_RS02090;Dbxref=Genbank:WP_012173845.1;Name=WP_012173845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946851.1;locus_tag=DOLE_RS02090;product=Fic family protein;protein_id=WP_012173845.1;transl_table=11 NC_009943.1 RefSeq gene 480667 482046 . + . ID=gene-DOLE_RS02095;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=DOLE_RS02095;old_locus_tag=Dole_0417 NC_009943.1 Protein Homology CDS 480667 482046 . + 0 ID=cds-WP_012173846.1;Parent=gene-DOLE_RS02095;Dbxref=Genbank:WP_012173846.1;Name=WP_012173846.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402831.1;locus_tag=DOLE_RS02095;product=magnesium transporter;protein_id=WP_012173846.1;transl_table=11 NC_009943.1 RefSeq gene 482202 482360 . + . ID=gene-DOLE_RS18120;Name=DOLE_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18120 NC_009943.1 GeneMarkS-2+ CDS 482202 482360 . + 0 ID=cds-WP_153304334.1;Parent=gene-DOLE_RS18120;Dbxref=Genbank:WP_153304334.1;Name=WP_153304334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18120;product=hypothetical protein;protein_id=WP_153304334.1;transl_table=11 NC_009943.1 RefSeq gene 482627 483076 . + . ID=gene-DOLE_RS02105;Name=DOLE_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02105;old_locus_tag=Dole_0419 NC_009943.1 Protein Homology CDS 482627 483076 . + 0 ID=cds-WP_012173848.1;Parent=gene-DOLE_RS02105;Dbxref=Genbank:WP_012173848.1;Name=WP_012173848.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021361.2;locus_tag=DOLE_RS02105;product=DUF2059 domain-containing protein;protein_id=WP_012173848.1;transl_table=11 NC_009943.1 RefSeq gene 483154 483702 . + . ID=gene-DOLE_RS02110;Name=DOLE_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02110;old_locus_tag=Dole_0420 NC_009943.1 GeneMarkS-2+ CDS 483154 483702 . + 0 ID=cds-WP_012173849.1;Parent=gene-DOLE_RS02110;Dbxref=Genbank:WP_012173849.1;Name=WP_012173849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02110;product=hypothetical protein;protein_id=WP_012173849.1;transl_table=11 NC_009943.1 RefSeq gene 484267 486432 . - . ID=gene-DOLE_RS02115;Name=DOLE_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02115;old_locus_tag=Dole_0421 NC_009943.1 Protein Homology CDS 484267 486432 . - 0 ID=cds-WP_012173850.1;Parent=gene-DOLE_RS02115;Dbxref=Genbank:WP_012173850.1;Name=WP_012173850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01512.1;locus_tag=DOLE_RS02115;product=heavy metal translocating P-type ATPase;protein_id=WP_012173850.1;transl_table=11 NC_009943.1 RefSeq gene 486450 487229 . - . ID=gene-DOLE_RS02120;Name=DOLE_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02120;old_locus_tag=Dole_0422 NC_009943.1 Protein Homology CDS 486450 487229 . - 0 ID=cds-WP_052294231.1;Parent=gene-DOLE_RS02120;Dbxref=Genbank:WP_052294231.1;Name=WP_052294231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024258.2;locus_tag=DOLE_RS02120;product=metallophosphoesterase family protein;protein_id=WP_052294231.1;transl_table=11 NC_009943.1 RefSeq gene 487247 489253 . - . ID=gene-DOLE_RS02125;Name=DOLE_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02125;old_locus_tag=Dole_0423 NC_009943.1 Protein Homology CDS 487247 489253 . - 0 ID=cds-WP_012173852.1;Parent=gene-DOLE_RS02125;Dbxref=Genbank:WP_012173852.1;Name=WP_012173852.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015722.2;locus_tag=DOLE_RS02125;product=bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein;protein_id=WP_012173852.1;transl_table=11 NC_009943.1 RefSeq gene 489253 489558 . - . ID=gene-DOLE_RS02130;Name=DOLE_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02130;old_locus_tag=Dole_0424 NC_009943.1 GeneMarkS-2+ CDS 489253 489558 . - 0 ID=cds-WP_012173853.1;Parent=gene-DOLE_RS02130;Dbxref=Genbank:WP_012173853.1;Name=WP_012173853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02130;product=hypothetical protein;protein_id=WP_012173853.1;transl_table=11 NC_009943.1 RefSeq gene 490042 490413 . - . ID=gene-DOLE_RS02140;Name=DOLE_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02140;old_locus_tag=Dole_0425 NC_009943.1 GeneMarkS-2+ CDS 490042 490413 . - 0 ID=cds-WP_012173854.1;Parent=gene-DOLE_RS02140;Dbxref=Genbank:WP_012173854.1;Name=WP_012173854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02140;product=periplasmic heavy metal sensor;protein_id=WP_012173854.1;transl_table=11 NC_009943.1 RefSeq gene 490723 492519 . + . ID=gene-DOLE_RS02145;Name=DOLE_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02145;old_locus_tag=Dole_0426 NC_009943.1 Protein Homology CDS 490723 492519 . + 0 ID=cds-WP_012173855.1;Parent=gene-DOLE_RS02145;Dbxref=Genbank:WP_012173855.1;Name=WP_012173855.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS02145;product=ATP-binding protein;protein_id=WP_012173855.1;transl_table=11 NC_009943.1 RefSeq gene 492516 493892 . + . ID=gene-DOLE_RS02150;Name=DOLE_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02150;old_locus_tag=Dole_0427 NC_009943.1 Protein Homology CDS 492516 493892 . + 0 ID=cds-WP_012173856.1;Parent=gene-DOLE_RS02150;Dbxref=Genbank:WP_012173856.1;Name=WP_012173856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963940.1;locus_tag=DOLE_RS02150;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012173856.1;transl_table=11 NC_009943.1 RefSeq gene 493901 494632 . + . ID=gene-DOLE_RS02155;Name=DOLE_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02155;old_locus_tag=Dole_0428 NC_009943.1 GeneMarkS-2+ CDS 493901 494632 . + 0 ID=cds-WP_041280303.1;Parent=gene-DOLE_RS02155;Dbxref=Genbank:WP_041280303.1;Name=WP_041280303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02155;product=peptidoglycan-binding protein;protein_id=WP_041280303.1;transl_table=11 NC_009943.1 RefSeq gene 494943 495416 . + . ID=gene-DOLE_RS02160;Name=DOLE_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02160;old_locus_tag=Dole_0429 NC_009943.1 Protein Homology CDS 494943 495416 . + 0 ID=cds-WP_012173858.1;Parent=gene-DOLE_RS02160;Dbxref=Genbank:WP_012173858.1;Name=WP_012173858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025173.2;locus_tag=DOLE_RS02160;product=periplasmic heavy metal sensor;protein_id=WP_012173858.1;transl_table=11 NC_009943.1 RefSeq gene 495853 496218 . + . ID=gene-DOLE_RS18475;Name=DOLE_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18475;old_locus_tag=Dole_0430 NC_009943.1 Protein Homology CDS 495853 496218 . + 0 ID=cds-WP_012173859.1;Parent=gene-DOLE_RS18475;Dbxref=Genbank:WP_012173859.1;Name=WP_012173859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021378.2;locus_tag=DOLE_RS18475;product=SHOCT domain-containing protein;protein_id=WP_012173859.1;transl_table=11 NC_009943.1 RefSeq gene 496237 497820 . + . ID=gene-DOLE_RS02175;Name=DOLE_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02175;old_locus_tag=Dole_0431 NC_009943.1 Protein Homology CDS 496237 497820 . + 0 ID=cds-WP_012173860.1;Parent=gene-DOLE_RS02175;Dbxref=Genbank:WP_012173860.1;Name=WP_012173860.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: protein motif:HMM:NF019351.2;locus_tag=DOLE_RS02175;product=multicopper oxidase domain-containing protein;protein_id=WP_012173860.1;transl_table=11 NC_009943.1 RefSeq gene 498097 499956 . - . ID=gene-DOLE_RS02185;Name=DOLE_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02185;old_locus_tag=Dole_0432 NC_009943.1 Protein Homology CDS 498097 499956 . - 0 ID=cds-WP_012173861.1;Parent=gene-DOLE_RS02185;Dbxref=Genbank:WP_012173861.1;Name=WP_012173861.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=DOLE_RS02185;product=DEAD/DEAH box helicase family protein;protein_id=WP_012173861.1;transl_table=11 NC_009943.1 RefSeq gene 499953 500756 . - . ID=gene-DOLE_RS02190;Name=DOLE_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02190;old_locus_tag=Dole_0433 NC_009943.1 GeneMarkS-2+ CDS 499953 500756 . - 0 ID=cds-WP_012173862.1;Parent=gene-DOLE_RS02190;Dbxref=Genbank:WP_012173862.1;Name=WP_012173862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02190;product=hypothetical protein;protein_id=WP_012173862.1;transl_table=11 NC_009943.1 RefSeq gene 500753 502417 . - . ID=gene-DOLE_RS02195;Name=pglZ;gbkey=Gene;gene=pglZ;gene_biotype=protein_coding;locus_tag=DOLE_RS02195;old_locus_tag=Dole_0434 NC_009943.1 Protein Homology CDS 500753 502417 . - 0 ID=cds-WP_012173863.1;Parent=gene-DOLE_RS02195;Dbxref=Genbank:WP_012173863.1;Name=WP_012173863.1;gbkey=CDS;gene=pglZ;inference=COORDINATES: protein motif:HMM:NF033449.0;locus_tag=DOLE_RS02195;product=BREX-3 system phosphatase PglZ;protein_id=WP_012173863.1;transl_table=11 NC_009943.1 RefSeq gene 502435 503460 . + . ID=gene-DOLE_RS18535;Name=DOLE_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18535;old_locus_tag=Dole_0435 NC_009943.1 GeneMarkS-2+ CDS 502435 503460 . + 0 ID=cds-WP_012173864.1;Parent=gene-DOLE_RS18535;Dbxref=Genbank:WP_012173864.1;Name=WP_012173864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18535;product=hypothetical protein;protein_id=WP_012173864.1;transl_table=11 NC_009943.1 RefSeq gene 503829 504177 . - . ID=gene-DOLE_RS17810;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=DOLE_RS17810;old_locus_tag=Dole_R0006 NC_009943.1 cmsearch tmRNA 503829 504177 . - . ID=rna-DOLE_RS17810;Parent=gene-DOLE_RS17810;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS17810;product=transfer-messenger RNA NC_009943.1 cmsearch exon 503829 504177 . - . ID=exon-DOLE_RS17810-1;Parent=rna-DOLE_RS17810;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS17810;product=transfer-messenger RNA NC_009943.1 RefSeq gene 504223 505173 . - . ID=gene-DOLE_RS02205;Name=DOLE_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02205;old_locus_tag=Dole_0436 NC_009943.1 Protein Homology CDS 504223 505173 . - 0 ID=cds-WP_012173865.1;Parent=gene-DOLE_RS02205;Dbxref=Genbank:WP_012173865.1;Name=WP_012173865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072342.1;locus_tag=DOLE_RS02205;product=DUF1566 domain-containing protein;protein_id=WP_012173865.1;transl_table=11 NC_009943.1 RefSeq gene 505177 505959 . - . ID=gene-DOLE_RS02210;Name=DOLE_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02210;old_locus_tag=Dole_0437 NC_009943.1 Protein Homology CDS 505177 505959 . - 0 ID=cds-WP_012173866.1;Parent=gene-DOLE_RS02210;Dbxref=Genbank:WP_012173866.1;Name=WP_012173866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877733.1;locus_tag=DOLE_RS02210;product=YkgJ family cysteine cluster protein;protein_id=WP_012173866.1;transl_table=11 NC_009943.1 RefSeq gene 505956 506567 . - . ID=gene-DOLE_RS02215;Name=DOLE_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02215;old_locus_tag=Dole_0438 NC_009943.1 GeneMarkS-2+ CDS 505956 506567 . - 0 ID=cds-WP_012173867.1;Parent=gene-DOLE_RS02215;Dbxref=Genbank:WP_012173867.1;Name=WP_012173867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02215;product=hypothetical protein;protein_id=WP_012173867.1;transl_table=11 NC_009943.1 RefSeq gene 506560 507633 . - . ID=gene-DOLE_RS02220;Name=DOLE_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02220;old_locus_tag=Dole_0439 NC_009943.1 Protein Homology CDS 506560 507633 . - 0 ID=cds-WP_012173868.1;Parent=gene-DOLE_RS02220;Dbxref=Genbank:WP_012173868.1;Name=WP_012173868.1;Ontology_term=GO:0016793;gbkey=CDS;go_function=triphosphoric monoester hydrolase activity|0016793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609436.1;locus_tag=DOLE_RS02220;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_012173868.1;transl_table=11 NC_009943.1 RefSeq gene 508158 510020 . + . ID=gene-DOLE_RS02225;Name=iorA;gbkey=Gene;gene=iorA;gene_biotype=protein_coding;locus_tag=DOLE_RS02225;old_locus_tag=Dole_0440 NC_009943.1 Protein Homology CDS 508158 510020 . + 0 ID=cds-WP_012173869.1;Parent=gene-DOLE_RS02225;Dbxref=Genbank:WP_012173869.1;Name=WP_012173869.1;Ontology_term=GO:0043805;gbkey=CDS;gene=iorA;go_function=indolepyruvate ferredoxin oxidoreductase activity|0043805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405272.1;locus_tag=DOLE_RS02225;product=indolepyruvate ferredoxin oxidoreductase subunit alpha;protein_id=WP_012173869.1;transl_table=11 NC_009943.1 RefSeq gene 510076 510675 . + . ID=gene-DOLE_RS02230;Name=DOLE_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02230;old_locus_tag=Dole_0441 NC_009943.1 Protein Homology CDS 510076 510675 . + 0 ID=cds-WP_153304336.1;Parent=gene-DOLE_RS02230;Dbxref=Genbank:WP_153304336.1;Name=WP_153304336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903025.1;locus_tag=DOLE_RS02230;product=indolepyruvate oxidoreductase subunit beta;protein_id=WP_153304336.1;transl_table=11 NC_009943.1 RefSeq gene 511044 511238 . + . ID=gene-DOLE_RS02235;Name=DOLE_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02235;old_locus_tag=Dole_0442 NC_009943.1 Protein Homology CDS 511044 511238 . + 0 ID=cds-WP_012173871.1;Parent=gene-DOLE_RS02235;Dbxref=Genbank:WP_012173871.1;Name=WP_012173871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957536.1;locus_tag=DOLE_RS02235;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_012173871.1;transl_table=11 NC_009943.1 RefSeq gene 511235 511591 . + . ID=gene-DOLE_RS02240;Name=DOLE_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02240;old_locus_tag=Dole_0443 NC_009943.1 Protein Homology CDS 511235 511591 . + 0 ID=cds-WP_012173872.1;Parent=gene-DOLE_RS02240;Dbxref=Genbank:WP_012173872.1;Name=WP_012173872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957537.1;locus_tag=DOLE_RS02240;product=toxin-antitoxin system HicB family antitoxin;protein_id=WP_012173872.1;transl_table=11 NC_009943.1 RefSeq gene 511883 512101 . + . ID=gene-DOLE_RS17815;Name=DOLE_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17815;old_locus_tag=Dole_0444 NC_009943.1 GeneMarkS-2+ CDS 511883 512101 . + 0 ID=cds-WP_012173873.1;Parent=gene-DOLE_RS17815;Dbxref=Genbank:WP_012173873.1;Name=WP_012173873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17815;product=hypothetical protein;protein_id=WP_012173873.1;transl_table=11 NC_009943.1 RefSeq gene 513114 513581 . + . ID=gene-DOLE_RS02245;Name=DOLE_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02245;old_locus_tag=Dole_0445 NC_009943.1 GeneMarkS-2+ CDS 513114 513581 . + 0 ID=cds-WP_041280306.1;Parent=gene-DOLE_RS02245;Dbxref=Genbank:WP_041280306.1;Name=WP_041280306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02245;product=hypothetical protein;protein_id=WP_041280306.1;transl_table=11 NC_009943.1 RefSeq gene 513719 514300 . + . ID=gene-DOLE_RS02250;Name=DOLE_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02250;old_locus_tag=Dole_0446 NC_009943.1 Protein Homology CDS 513719 514300 . + 0 ID=cds-WP_012173875.1;Parent=gene-DOLE_RS02250;Dbxref=Genbank:WP_012173875.1;Name=WP_012173875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403702.1;locus_tag=DOLE_RS02250;product=transglutaminase family protein;protein_id=WP_012173875.1;transl_table=11 NC_009943.1 RefSeq gene 514478 514981 . + . ID=gene-DOLE_RS02255;Name=DOLE_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02255;old_locus_tag=Dole_0447 NC_009943.1 GeneMarkS-2+ CDS 514478 514981 . + 0 ID=cds-WP_153304337.1;Parent=gene-DOLE_RS02255;Dbxref=Genbank:WP_153304337.1;Name=WP_153304337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02255;product=hypothetical protein;protein_id=WP_153304337.1;transl_table=11 NC_009943.1 RefSeq gene 515117 517117 . - . ID=gene-DOLE_RS02260;Name=DOLE_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02260;old_locus_tag=Dole_0448 NC_009943.1 Protein Homology CDS 515117 517117 . - 0 ID=cds-WP_012173877.1;Parent=gene-DOLE_RS02260;Dbxref=Genbank:WP_012173877.1;Name=WP_012173877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012975.2;locus_tag=DOLE_RS02260;product=ribonuclease catalytic domain-containing protein;protein_id=WP_012173877.1;transl_table=11 NC_009943.1 RefSeq gene 517312 517833 . + . ID=gene-DOLE_RS02265;Name=DOLE_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02265;old_locus_tag=Dole_0449 NC_009943.1 Protein Homology CDS 517312 517833 . + 0 ID=cds-WP_012173878.1;Parent=gene-DOLE_RS02265;Dbxref=Genbank:WP_012173878.1;Name=WP_012173878.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025719.2;locus_tag=DOLE_RS02265;product=RsbRD N-terminal domain-containing protein;protein_id=WP_012173878.1;transl_table=11 NC_009943.1 RefSeq gene 517894 518922 . + . ID=gene-DOLE_RS02270;Name=dsrM;gbkey=Gene;gene=dsrM;gene_biotype=protein_coding;locus_tag=DOLE_RS02270;old_locus_tag=Dole_0450 NC_009943.1 Protein Homology CDS 517894 518922 . + 0 ID=cds-WP_012173879.1;Parent=gene-DOLE_RS02270;Dbxref=Genbank:WP_012173879.1;Name=WP_012173879.1;gbkey=CDS;gene=dsrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587068.1;locus_tag=DOLE_RS02270;product=sulfate reduction electron transfer complex DsrMKJOP subunit DsrM;protein_id=WP_012173879.1;transl_table=11 NC_009943.1 RefSeq gene 518923 520572 . + . ID=gene-DOLE_RS02275;Name=DOLE_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02275;old_locus_tag=Dole_0451 NC_009943.1 Protein Homology CDS 518923 520572 . + 0 ID=cds-WP_012173880.1;Parent=gene-DOLE_RS02275;Dbxref=Genbank:WP_012173880.1;Name=WP_012173880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958759.1;locus_tag=DOLE_RS02275;product=(Fe-S)-binding protein;protein_id=WP_012173880.1;transl_table=11 NC_009943.1 RefSeq gene 520562 520951 . + . ID=gene-DOLE_RS02280;Name=dsrJ;gbkey=Gene;gene=dsrJ;gene_biotype=protein_coding;locus_tag=DOLE_RS02280;old_locus_tag=Dole_0452 NC_009943.1 Protein Homology CDS 520562 520951 . + 0 ID=cds-WP_012173881.1;Parent=gene-DOLE_RS02280;Dbxref=Genbank:WP_012173881.1;Name=WP_012173881.1;gbkey=CDS;gene=dsrJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905009.1;locus_tag=DOLE_RS02280;product=sulfate reduction electron transfer complex DsrMKJOP subunit DsrJ;protein_id=WP_012173881.1;transl_table=11 NC_009943.1 RefSeq gene 520951 521784 . + . ID=gene-DOLE_RS02285;Name=DOLE_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02285;old_locus_tag=Dole_0453 NC_009943.1 Protein Homology CDS 520951 521784 . + 0 ID=cds-WP_012173882.1;Parent=gene-DOLE_RS02285;Dbxref=Genbank:WP_012173882.1;Name=WP_012173882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876670.1;locus_tag=DOLE_RS02285;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012173882.1;transl_table=11 NC_009943.1 RefSeq gene 521806 522975 . + . ID=gene-DOLE_RS02290;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=DOLE_RS02290;old_locus_tag=Dole_0454 NC_009943.1 Protein Homology CDS 521806 522975 . + 0 ID=cds-WP_012173883.1;Parent=gene-DOLE_RS02290;Dbxref=Genbank:WP_012173883.1;Name=WP_012173883.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609753.1;locus_tag=DOLE_RS02290;product=polysulfide reductase NrfD;protein_id=WP_012173883.1;transl_table=11 NC_009943.1 RefSeq gene 523090 523884 . - . ID=gene-DOLE_RS02295;Name=DOLE_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02295;old_locus_tag=Dole_0455 NC_009943.1 Protein Homology CDS 523090 523884 . - 0 ID=cds-WP_012173884.1;Parent=gene-DOLE_RS02295;Dbxref=Genbank:WP_012173884.1;Name=WP_012173884.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF013382.2;locus_tag=DOLE_RS02295;product=class I SAM-dependent methyltransferase;protein_id=WP_012173884.1;transl_table=11 NC_009943.1 RefSeq gene 523994 525079 . - . ID=gene-DOLE_RS02300;Name=DOLE_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02300;old_locus_tag=Dole_0456 NC_009943.1 Protein Homology CDS 523994 525079 . - 0 ID=cds-WP_012173885.1;Parent=gene-DOLE_RS02300;Dbxref=Genbank:WP_012173885.1;Name=WP_012173885.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024634.2;locus_tag=DOLE_RS02300;product=4Fe-4S binding protein;protein_id=WP_012173885.1;transl_table=11 NC_009943.1 RefSeq gene 525097 525717 . - . ID=gene-DOLE_RS02305;Name=DOLE_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02305;old_locus_tag=Dole_0457 NC_009943.1 Protein Homology CDS 525097 525717 . - 0 ID=cds-WP_012173886.1;Parent=gene-DOLE_RS02305;Dbxref=Genbank:WP_012173886.1;Name=WP_012173886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS02305;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012173886.1;transl_table=11 NC_009943.1 RefSeq gene 525875 526840 . - . ID=gene-DOLE_RS02310;Name=DOLE_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02310;old_locus_tag=Dole_0458 NC_009943.1 Protein Homology CDS 525875 526840 . - 0 ID=cds-WP_012173887.1;Parent=gene-DOLE_RS02310;Dbxref=Genbank:WP_012173887.1;Name=WP_012173887.1;Ontology_term=GO:0006555,GO:0004489;gbkey=CDS;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877019.1;locus_tag=DOLE_RS02310;product=methylenetetrahydrofolate reductase;protein_id=WP_012173887.1;transl_table=11 NC_009943.1 RefSeq gene 526887 527270 . - . ID=gene-DOLE_RS02315;Name=DOLE_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02315;old_locus_tag=Dole_0459 NC_009943.1 Protein Homology CDS 526887 527270 . - 0 ID=cds-WP_012173888.1;Parent=gene-DOLE_RS02315;Dbxref=Genbank:WP_012173888.1;Name=WP_012173888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964202.1;locus_tag=DOLE_RS02315;product=(Fe-S)-binding protein;protein_id=WP_012173888.1;transl_table=11 NC_009943.1 RefSeq gene 527316 527984 . - . ID=gene-DOLE_RS02320;Name=DOLE_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02320;old_locus_tag=Dole_0460 NC_009943.1 Protein Homology CDS 527316 527984 . - 0 ID=cds-WP_012173889.1;Parent=gene-DOLE_RS02320;Dbxref=Genbank:WP_012173889.1;Name=WP_012173889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964205.1;locus_tag=DOLE_RS02320;product=hypothetical protein;protein_id=WP_012173889.1;transl_table=11 NC_009943.1 RefSeq gene 528005 528685 . - . ID=gene-DOLE_RS02325;Name=DOLE_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02325;old_locus_tag=Dole_0461 NC_009943.1 Protein Homology CDS 528005 528685 . - 0 ID=cds-WP_012173890.1;Parent=gene-DOLE_RS02325;Dbxref=Genbank:WP_012173890.1;Name=WP_012173890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878626.1;locus_tag=DOLE_RS02325;product=methylenetetrahydrofolate reductase C-terminal domain-containing protein;protein_id=WP_012173890.1;transl_table=11 NC_009943.1 RefSeq gene 528716 529123 . - . ID=gene-DOLE_RS02330;Name=DOLE_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02330;old_locus_tag=Dole_0462 NC_009943.1 Protein Homology CDS 528716 529123 . - 0 ID=cds-WP_012173891.1;Parent=gene-DOLE_RS02330;Dbxref=Genbank:WP_012173891.1;Name=WP_012173891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964208.1;locus_tag=DOLE_RS02330;product=cytochrome c3 family protein;protein_id=WP_012173891.1;transl_table=11 NC_009943.1 RefSeq gene 529533 529850 . + . ID=gene-DOLE_RS02335;Name=DOLE_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02335;old_locus_tag=Dole_0463 NC_009943.1 Protein Homology CDS 529533 529850 . + 0 ID=cds-WP_012173892.1;Parent=gene-DOLE_RS02335;Dbxref=Genbank:WP_012173892.1;Name=WP_012173892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957890.1;locus_tag=DOLE_RS02335;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_012173892.1;transl_table=11 NC_009943.1 RefSeq gene 529885 530436 . + . ID=gene-DOLE_RS02340;Name=DOLE_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02340;old_locus_tag=Dole_0464 NC_009943.1 Protein Homology CDS 529885 530436 . + 0 ID=cds-WP_232362723.1;Parent=gene-DOLE_RS02340;Dbxref=Genbank:WP_232362723.1;Name=WP_232362723.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585862.1;locus_tag=DOLE_RS02340;product=AsnC family transcriptional regulator;protein_id=WP_232362723.1;transl_table=11 NC_009943.1 RefSeq gene 530470 531288 . + . ID=gene-DOLE_RS02345;Name=DOLE_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02345;old_locus_tag=Dole_0465 NC_009943.1 Protein Homology CDS 530470 531288 . + 0 ID=cds-WP_012173894.1;Parent=gene-DOLE_RS02345;Dbxref=Genbank:WP_012173894.1;Name=WP_012173894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877650.1;locus_tag=DOLE_RS02345;product=nitrilase family protein;protein_id=WP_012173894.1;transl_table=11 NC_009943.1 RefSeq gene 531264 532022 . - . ID=gene-DOLE_RS02350;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=DOLE_RS02350;old_locus_tag=Dole_0466 NC_009943.1 Protein Homology CDS 531264 532022 . - 0 ID=cds-WP_012173895.1;Parent=gene-DOLE_RS02350;Dbxref=Genbank:WP_012173895.1;Name=WP_012173895.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966506.1;locus_tag=DOLE_RS02350;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_012173895.1;transl_table=11 NC_009943.1 RefSeq gene 532094 532169 . - . ID=gene-DOLE_RS02355;Name=DOLE_RS02355;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS02355;old_locus_tag=Dole_R0007 NC_009943.1 tRNAscan-SE tRNA 532094 532169 . - . ID=rna-DOLE_RS02355;Parent=gene-DOLE_RS02355;anticodon=(pos:complement(532134..532136));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS02355;product=tRNA-Arg NC_009943.1 tRNAscan-SE exon 532094 532169 . - . ID=exon-DOLE_RS02355-1;Parent=rna-DOLE_RS02355;anticodon=(pos:complement(532134..532136));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS02355;product=tRNA-Arg NC_009943.1 RefSeq gene 532231 533535 . - . ID=gene-DOLE_RS02360;Name=DOLE_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02360;old_locus_tag=Dole_0467 NC_009943.1 Protein Homology CDS 532231 533535 . - 0 ID=cds-WP_012173896.1;Parent=gene-DOLE_RS02360;Dbxref=Genbank:WP_012173896.1;Name=WP_012173896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965802.1;locus_tag=DOLE_RS02360;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_012173896.1;transl_table=11 NC_009943.1 RefSeq gene 533608 533805 . - . ID=gene-DOLE_RS02365;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=DOLE_RS02365;old_locus_tag=Dole_0468 NC_009943.1 Protein Homology CDS 533608 533805 . - 0 ID=cds-WP_052294327.1;Parent=gene-DOLE_RS02365;Dbxref=Genbank:WP_052294327.1;Name=WP_052294327.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957311.1;locus_tag=DOLE_RS02365;product=30S ribosomal protein S21;protein_id=WP_052294327.1;transl_table=11 NC_009943.1 RefSeq gene 534043 534717 . - . ID=gene-DOLE_RS02370;Name=DOLE_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02370;old_locus_tag=Dole_0469 NC_009943.1 Protein Homology CDS 534043 534717 . - 0 ID=cds-WP_012173898.1;Parent=gene-DOLE_RS02370;Dbxref=Genbank:WP_012173898.1;Name=WP_012173898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173898.1;locus_tag=DOLE_RS02370;product=adenylate kinase;protein_id=WP_012173898.1;transl_table=11 NC_009943.1 RefSeq gene 535141 536385 . + . ID=gene-DOLE_RS02375;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=DOLE_RS02375;old_locus_tag=Dole_0470 NC_009943.1 Protein Homology CDS 535141 536385 . + 0 ID=cds-WP_012173899.1;Parent=gene-DOLE_RS02375;Dbxref=Genbank:WP_012173899.1;Name=WP_012173899.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588386.1;locus_tag=DOLE_RS02375;product=transcription termination factor Rho;protein_id=WP_012173899.1;transl_table=11 NC_009943.1 RefSeq gene 536619 536840 . + . ID=gene-DOLE_RS02380;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=DOLE_RS02380;old_locus_tag=Dole_0471 NC_009943.1 Protein Homology CDS 536619 536840 . + 0 ID=cds-WP_012173900.1;Parent=gene-DOLE_RS02380;Dbxref=Genbank:WP_012173900.1;Name=WP_012173900.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173900.1;locus_tag=DOLE_RS02380;product=50S ribosomal protein L31;protein_id=WP_012173900.1;transl_table=11 NC_009943.1 RefSeq gene 536892 537962 . + . ID=gene-DOLE_RS02385;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=DOLE_RS02385;old_locus_tag=Dole_0472 NC_009943.1 Protein Homology CDS 536892 537962 . + 0 ID=cds-WP_012173901.1;Parent=gene-DOLE_RS02385;Dbxref=Genbank:WP_012173901.1;Name=WP_012173901.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173901.1;locus_tag=DOLE_RS02385;product=peptide chain release factor 1;protein_id=WP_012173901.1;transl_table=11 NC_009943.1 RefSeq gene 537952 538845 . + . ID=gene-DOLE_RS02390;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=DOLE_RS02390;old_locus_tag=Dole_0473 NC_009943.1 Protein Homology CDS 537952 538845 . + 0 ID=cds-WP_012173902.1;Parent=gene-DOLE_RS02390;Dbxref=Genbank:WP_012173902.1;Name=WP_012173902.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876609.1;locus_tag=DOLE_RS02390;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_012173902.1;transl_table=11 NC_009943.1 RefSeq gene 539062 539976 . + . ID=gene-DOLE_RS02395;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=DOLE_RS02395;old_locus_tag=Dole_0474 NC_009943.1 Protein Homology CDS 539062 539976 . + 0 ID=cds-WP_012173903.1;Parent=gene-DOLE_RS02395;Dbxref=Genbank:WP_012173903.1;Name=WP_012173903.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588382.1;locus_tag=DOLE_RS02395;product=30S ribosomal protein S2;protein_id=WP_012173903.1;transl_table=11 NC_009943.1 RefSeq gene 540012 540608 . + . ID=gene-DOLE_RS02400;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=DOLE_RS02400;old_locus_tag=Dole_0475 NC_009943.1 Protein Homology CDS 540012 540608 . + 0 ID=cds-WP_012173904.1;Parent=gene-DOLE_RS02400;Dbxref=Genbank:WP_012173904.1;Name=WP_012173904.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173904.1;locus_tag=DOLE_RS02400;product=translation elongation factor Ts;protein_id=WP_012173904.1;transl_table=11 NC_009943.1 RefSeq gene 540612 541349 . + . ID=gene-DOLE_RS02405;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=DOLE_RS02405;old_locus_tag=Dole_0476 NC_009943.1 Protein Homology CDS 540612 541349 . + 0 ID=cds-WP_012173905.1;Parent=gene-DOLE_RS02405;Dbxref=Genbank:WP_012173905.1;Name=WP_012173905.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404312.1;locus_tag=DOLE_RS02405;product=UMP kinase;protein_id=WP_012173905.1;transl_table=11 NC_009943.1 RefSeq gene 541391 541948 . + . ID=gene-DOLE_RS02410;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=DOLE_RS02410;old_locus_tag=Dole_0477 NC_009943.1 Protein Homology CDS 541391 541948 . + 0 ID=cds-WP_012173906.1;Parent=gene-DOLE_RS02410;Dbxref=Genbank:WP_012173906.1;Name=WP_012173906.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173906.1;locus_tag=DOLE_RS02410;product=ribosome recycling factor;protein_id=WP_012173906.1;transl_table=11 NC_009943.1 RefSeq gene 541938 542681 . + . ID=gene-DOLE_RS02415;Name=DOLE_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02415;old_locus_tag=Dole_0478 NC_009943.1 Protein Homology CDS 541938 542681 . + 0 ID=cds-WP_012173907.1;Parent=gene-DOLE_RS02415;Dbxref=Genbank:WP_012173907.1;Name=WP_012173907.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903607.1;locus_tag=DOLE_RS02415;product=isoprenyl transferase;protein_id=WP_012173907.1;transl_table=11 NC_009943.1 RefSeq gene 542702 543541 . + . ID=gene-DOLE_RS02420;Name=DOLE_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02420;old_locus_tag=Dole_0479 NC_009943.1 Protein Homology CDS 542702 543541 . + 0 ID=cds-WP_012173908.1;Parent=gene-DOLE_RS02420;Dbxref=Genbank:WP_012173908.1;Name=WP_012173908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013327.2;locus_tag=DOLE_RS02420;product=phosphatidate cytidylyltransferase;protein_id=WP_012173908.1;transl_table=11 NC_009943.1 RefSeq gene 543538 544689 . + . ID=gene-DOLE_RS02425;Name=DOLE_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02425;old_locus_tag=Dole_0480 NC_009943.1 Protein Homology CDS 543538 544689 . + 0 ID=cds-WP_012173909.1;Parent=gene-DOLE_RS02425;Dbxref=Genbank:WP_012173909.1;Name=WP_012173909.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173909.1;locus_tag=DOLE_RS02425;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_012173909.1;transl_table=11 NC_009943.1 RefSeq gene 544794 545861 . + . ID=gene-DOLE_RS02430;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=DOLE_RS02430;old_locus_tag=Dole_0481 NC_009943.1 Protein Homology CDS 544794 545861 . + 0 ID=cds-WP_012173910.1;Parent=gene-DOLE_RS02430;Dbxref=Genbank:WP_012173910.1;Name=WP_012173910.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163207.1;locus_tag=DOLE_RS02430;product=RIP metalloprotease RseP;protein_id=WP_012173910.1;transl_table=11 NC_009943.1 RefSeq gene 545871 548867 . + . ID=gene-DOLE_RS02435;Name=DOLE_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02435;old_locus_tag=Dole_0482 NC_009943.1 Protein Homology CDS 545871 548867 . + 0 ID=cds-WP_012173911.1;Parent=gene-DOLE_RS02435;Dbxref=Genbank:WP_012173911.1;Name=WP_012173911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074202.1;locus_tag=DOLE_RS02435;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_012173911.1;transl_table=11 NC_009943.1 RefSeq gene 548864 549694 . + . ID=gene-DOLE_RS02440;Name=DOLE_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02440;old_locus_tag=Dole_0483 NC_009943.1 Protein Homology CDS 548864 549694 . + 0 ID=cds-WP_012173912.1;Parent=gene-DOLE_RS02440;Dbxref=Genbank:WP_012173912.1;Name=WP_012173912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903612.1;locus_tag=DOLE_RS02440;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_012173912.1;transl_table=11 NC_009943.1 RefSeq gene 549746 550966 . + . ID=gene-DOLE_RS02445;Name=DOLE_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02445;old_locus_tag=Dole_0484 NC_009943.1 GeneMarkS-2+ CDS 549746 550966 . + 0 ID=cds-WP_012173913.1;Parent=gene-DOLE_RS02445;Dbxref=Genbank:WP_012173913.1;Name=WP_012173913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02445;product=hypothetical protein;protein_id=WP_012173913.1;transl_table=11 NC_009943.1 RefSeq gene 551100 551726 . - . ID=gene-DOLE_RS02450;Name=DOLE_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02450;old_locus_tag=Dole_0485 NC_009943.1 Protein Homology CDS 551100 551726 . - 0 ID=cds-WP_012173914.1;Parent=gene-DOLE_RS02450;Dbxref=Genbank:WP_012173914.1;Name=WP_012173914.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024901.2;locus_tag=DOLE_RS02450;product=DUF4124 domain-containing protein;protein_id=WP_012173914.1;transl_table=11 NC_009943.1 RefSeq gene 552061 552564 . + . ID=gene-DOLE_RS16950;Name=DOLE_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16950;old_locus_tag=Dole_0486 NC_009943.1 Protein Homology CDS 552061 552564 . + 0 ID=cds-WP_012173915.1;Parent=gene-DOLE_RS16950;Dbxref=Genbank:WP_012173915.1;Name=WP_012173915.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:NF023444.2;locus_tag=DOLE_RS16950;product=GspH/FimT family pseudopilin;protein_id=WP_012173915.1;transl_table=11 NC_009943.1 RefSeq gene 552575 553354 . + . ID=gene-DOLE_RS02460;Name=DOLE_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02460;old_locus_tag=Dole_0487 NC_009943.1 Protein Homology CDS 552575 553354 . + 0 ID=cds-WP_012173916.1;Parent=gene-DOLE_RS02460;Dbxref=Genbank:WP_012173916.1;Name=WP_012173916.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=DOLE_RS02460;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_012173916.1;transl_table=11 NC_009943.1 RefSeq gene 553377 553862 . + . ID=gene-DOLE_RS02465;Name=DOLE_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02465;old_locus_tag=Dole_0488 NC_009943.1 Protein Homology CDS 553377 553862 . + 0 ID=cds-WP_012173917.1;Parent=gene-DOLE_RS02465;Dbxref=Genbank:WP_012173917.1;Name=WP_012173917.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.2;locus_tag=DOLE_RS02465;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_012173917.1;transl_table=11 NC_009943.1 RefSeq gene 553883 554380 . + . ID=gene-DOLE_RS02470;Name=DOLE_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02470;old_locus_tag=Dole_0489 NC_009943.1 GeneMarkS-2+ CDS 553883 554380 . + 0 ID=cds-WP_153304338.1;Parent=gene-DOLE_RS02470;Dbxref=Genbank:WP_153304338.1;Name=WP_153304338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02470;product=hypothetical protein;protein_id=WP_153304338.1;transl_table=11 NC_009943.1 RefSeq gene 554441 559078 . + . ID=gene-DOLE_RS02475;Name=DOLE_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02475;old_locus_tag=Dole_0490 NC_009943.1 Protein Homology CDS 554441 559078 . + 0 ID=cds-WP_012173919.1;Parent=gene-DOLE_RS02475;Dbxref=Genbank:WP_012173919.1;Name=WP_012173919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017388.2;locus_tag=DOLE_RS02475;product=PilC/PilY family type IV pilus protein;protein_id=WP_012173919.1;transl_table=11 NC_009943.1 RefSeq gene 559149 559484 . + . ID=gene-DOLE_RS02480;Name=DOLE_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02480;old_locus_tag=Dole_0491 NC_009943.1 GeneMarkS-2+ CDS 559149 559484 . + 0 ID=cds-WP_012173920.1;Parent=gene-DOLE_RS02480;Dbxref=Genbank:WP_012173920.1;Name=WP_012173920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02480;product=hypothetical protein;protein_id=WP_012173920.1;transl_table=11 NC_009943.1 RefSeq gene 559555 560400 . - . ID=gene-DOLE_RS16955;Name=DOLE_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16955;old_locus_tag=Dole_0492 NC_009943.1 Protein Homology CDS 559555 560400 . - 0 ID=cds-WP_012173921.1;Parent=gene-DOLE_RS16955;Dbxref=Genbank:WP_012173921.1;Name=WP_012173921.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024639.2;locus_tag=DOLE_RS16955;product=HAD family hydrolase;protein_id=WP_012173921.1;transl_table=11 NC_009943.1 RefSeq gene 560397 561797 . - . ID=gene-DOLE_RS02490;Name=DOLE_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02490;old_locus_tag=Dole_0493 NC_009943.1 GeneMarkS-2+ CDS 560397 561797 . - 0 ID=cds-WP_012173922.1;Parent=gene-DOLE_RS02490;Dbxref=Genbank:WP_012173922.1;Name=WP_012173922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02490;product=hypothetical protein;protein_id=WP_012173922.1;transl_table=11 NC_009943.1 RefSeq gene 562038 562634 . - . ID=gene-DOLE_RS02495;Name=DOLE_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02495;old_locus_tag=Dole_0494 NC_009943.1 GeneMarkS-2+ CDS 562038 562634 . - 0 ID=cds-WP_012173923.1;Parent=gene-DOLE_RS02495;Dbxref=Genbank:WP_012173923.1;Name=WP_012173923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02495;product=hypothetical protein;protein_id=WP_012173923.1;transl_table=11 NC_009943.1 RefSeq gene 562967 564208 . + . ID=gene-DOLE_RS02500;Name=DOLE_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02500;old_locus_tag=Dole_0495 NC_009943.1 Protein Homology CDS 562967 564208 . + 0 ID=cds-WP_012173924.1;Parent=gene-DOLE_RS02500;Dbxref=Genbank:WP_012173924.1;Name=WP_012173924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903442.1;locus_tag=DOLE_RS02500;product=M48 family metallopeptidase;protein_id=WP_012173924.1;transl_table=11 NC_009943.1 RefSeq gene 564444 565130 . - . ID=gene-DOLE_RS02505;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=DOLE_RS02505;old_locus_tag=Dole_0496 NC_009943.1 Protein Homology CDS 564444 565130 . - 0 ID=cds-WP_012173925.1;Parent=gene-DOLE_RS02505;Dbxref=Genbank:WP_012173925.1;Name=WP_012173925.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403064.1;locus_tag=DOLE_RS02505;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_012173925.1;transl_table=11 NC_009943.1 RefSeq gene 565127 565765 . - . ID=gene-DOLE_RS02510;Name=DOLE_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02510;old_locus_tag=Dole_0497 NC_009943.1 Protein Homology CDS 565127 565765 . - 0 ID=cds-WP_012173926.1;Parent=gene-DOLE_RS02510;Dbxref=Genbank:WP_012173926.1;Name=WP_012173926.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878558.1;locus_tag=DOLE_RS02510;product=radical SAM protein;protein_id=WP_012173926.1;transl_table=11 NC_009943.1 RefSeq gene 565762 565959 . - . ID=gene-DOLE_RS02515;Name=DOLE_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02515 NC_009943.1 Protein Homology CDS 565762 565959 . - 0 ID=cds-WP_041280309.1;Parent=gene-DOLE_RS02515;Dbxref=Genbank:WP_041280309.1;Name=WP_041280309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163600.1;locus_tag=DOLE_RS02515;product=hypothetical protein;protein_id=WP_041280309.1;transl_table=11 NC_009943.1 RefSeq gene 566635 566720 . - . ID=gene-DOLE_RS02520;Name=DOLE_RS02520;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS02520;old_locus_tag=Dole_R0008 NC_009943.1 tRNAscan-SE tRNA 566635 566720 . - . ID=rna-DOLE_RS02520;Parent=gene-DOLE_RS02520;anticodon=(pos:complement(566683..566685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS02520;product=tRNA-Leu NC_009943.1 tRNAscan-SE exon 566635 566720 . - . ID=exon-DOLE_RS02520-1;Parent=rna-DOLE_RS02520;anticodon=(pos:complement(566683..566685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS02520;product=tRNA-Leu NC_009943.1 RefSeq gene 566726 567061 . - . ID=gene-DOLE_RS02525;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=DOLE_RS02525;old_locus_tag=Dole_0498 NC_009943.1 Protein Homology CDS 566726 567061 . - 0 ID=cds-WP_012173927.1;Parent=gene-DOLE_RS02525;Dbxref=Genbank:WP_012173927.1;Name=WP_012173927.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904647.1;locus_tag=DOLE_RS02525;product=preprotein translocase subunit SecG;protein_id=WP_012173927.1;transl_table=11 NC_009943.1 RefSeq gene 567084 567839 . - . ID=gene-DOLE_RS02530;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=DOLE_RS02530;old_locus_tag=Dole_0499 NC_009943.1 Protein Homology CDS 567084 567839 . - 0 ID=cds-WP_012173928.1;Parent=gene-DOLE_RS02530;Dbxref=Genbank:WP_012173928.1;Name=WP_012173928.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610490.1;locus_tag=DOLE_RS02530;product=triose-phosphate isomerase;protein_id=WP_012173928.1;transl_table=11 NC_009943.1 RefSeq gene 568105 569109 . - . ID=gene-DOLE_RS02535;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=DOLE_RS02535;old_locus_tag=Dole_0500 NC_009943.1 Protein Homology CDS 568105 569109 . - 0 ID=cds-WP_012173929.1;Parent=gene-DOLE_RS02535;Dbxref=Genbank:WP_012173929.1;Name=WP_012173929.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957679.1;locus_tag=DOLE_RS02535;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_012173929.1;transl_table=11 NC_009943.1 RefSeq gene 569111 569581 . - . ID=gene-DOLE_RS02540;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=DOLE_RS02540;old_locus_tag=Dole_0501 NC_009943.1 Protein Homology CDS 569111 569581 . - 0 ID=cds-WP_012173930.1;Parent=gene-DOLE_RS02540;Dbxref=Genbank:WP_012173930.1;Name=WP_012173930.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: protein motif:HMM:TIGR01575.1;locus_tag=DOLE_RS02540;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_012173930.1;transl_table=11 NC_009943.1 RefSeq gene 569571 569987 . - . ID=gene-DOLE_RS02545;Name=DOLE_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02545;old_locus_tag=Dole_0502 NC_009943.1 Protein Homology CDS 569571 569987 . - 0 ID=cds-WP_012173931.1;Parent=gene-DOLE_RS02545;Dbxref=Genbank:WP_012173931.1;Name=WP_012173931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610492.1;locus_tag=DOLE_RS02545;product=PTS fructose transporter subunit IIA;protein_id=WP_012173931.1;transl_table=11 NC_009943.1 RefSeq gene 569984 570865 . - . ID=gene-DOLE_RS02550;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=DOLE_RS02550;old_locus_tag=Dole_0503 NC_009943.1 Protein Homology CDS 569984 570865 . - 0 ID=cds-WP_012173932.1;Parent=gene-DOLE_RS02550;Dbxref=Genbank:WP_012173932.1;Name=WP_012173932.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173932.1;locus_tag=DOLE_RS02550;product=RNase adapter RapZ;protein_id=WP_012173932.1;transl_table=11 NC_009943.1 RefSeq gene 570872 571330 . - . ID=gene-DOLE_RS02555;Name=DOLE_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02555;old_locus_tag=Dole_0504 NC_009943.1 Protein Homology CDS 570872 571330 . - 0 ID=cds-WP_012173933.1;Parent=gene-DOLE_RS02555;Dbxref=Genbank:WP_012173933.1;Name=WP_012173933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904642.1;locus_tag=DOLE_RS02555;product=PTS sugar transporter subunit IIA;protein_id=WP_012173933.1;transl_table=11 NC_009943.1 RefSeq gene 571510 571845 . - . ID=gene-DOLE_RS02560;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=DOLE_RS02560;old_locus_tag=Dole_0505 NC_009943.1 Protein Homology CDS 571510 571845 . - 0 ID=cds-WP_012173934.1;Parent=gene-DOLE_RS02560;Dbxref=Genbank:WP_012173934.1;Name=WP_012173934.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964486.1;locus_tag=DOLE_RS02560;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_012173934.1;transl_table=11 NC_009943.1 RefSeq gene 571857 573299 . - . ID=gene-DOLE_RS02565;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=DOLE_RS02565;old_locus_tag=Dole_0506 NC_009943.1 Protein Homology CDS 571857 573299 . - 0 ID=cds-WP_012173935.1;Parent=gene-DOLE_RS02565;Dbxref=Genbank:WP_012173935.1;Name=WP_012173935.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876964.1;locus_tag=DOLE_RS02565;product=RNA polymerase factor sigma-54;protein_id=WP_012173935.1;transl_table=11 NC_009943.1 RefSeq gene 573301 574023 . - . ID=gene-DOLE_RS02570;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=DOLE_RS02570;old_locus_tag=Dole_0507 NC_009943.1 Protein Homology CDS 573301 574023 . - 0 ID=cds-WP_012173936.1;Parent=gene-DOLE_RS02570;Dbxref=Genbank:WP_012173936.1;Name=WP_012173936.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091254.1;locus_tag=DOLE_RS02570;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_012173936.1;transl_table=11 NC_009943.1 RefSeq gene 574038 574601 . - . ID=gene-DOLE_RS02575;Name=DOLE_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02575;old_locus_tag=Dole_0508 NC_009943.1 Protein Homology CDS 574038 574601 . - 0 ID=cds-WP_041280310.1;Parent=gene-DOLE_RS02575;Dbxref=Genbank:WP_041280310.1;Name=WP_041280310.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015901.2;locus_tag=DOLE_RS02575;product=hypothetical protein;protein_id=WP_041280310.1;transl_table=11 NC_009943.1 RefSeq gene 574634 575206 . - . ID=gene-DOLE_RS02580;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=DOLE_RS02580;old_locus_tag=Dole_0509 NC_009943.1 Protein Homology CDS 574634 575206 . - 0 ID=cds-WP_012173938.1;Parent=gene-DOLE_RS02580;Dbxref=Genbank:WP_012173938.1;Name=WP_012173938.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: protein motif:HMM:TIGR04409.1;locus_tag=DOLE_RS02580;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_012173938.1;transl_table=11 NC_009943.1 RefSeq gene 575231 575755 . - . ID=gene-DOLE_RS02585;Name=DOLE_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02585;old_locus_tag=Dole_0510 NC_009943.1 Protein Homology CDS 575231 575755 . - 0 ID=cds-WP_012173939.1;Parent=gene-DOLE_RS02585;Dbxref=Genbank:WP_012173939.1;Name=WP_012173939.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965461.1;locus_tag=DOLE_RS02585;product=HAD-IIIA family hydrolase;protein_id=WP_012173939.1;transl_table=11 NC_009943.1 RefSeq gene 575748 576587 . - . ID=gene-DOLE_RS02590;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=DOLE_RS02590;old_locus_tag=Dole_0511 NC_009943.1 Protein Homology CDS 575748 576587 . - 0 ID=cds-WP_012173940.1;Parent=gene-DOLE_RS02590;Dbxref=Genbank:WP_012173940.1;Name=WP_012173940.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173940.1;locus_tag=DOLE_RS02590;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_012173940.1;transl_table=11 NC_009943.1 RefSeq gene 576899 578263 . + . ID=gene-DOLE_RS02595;Name=DOLE_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02595;old_locus_tag=Dole_0512 NC_009943.1 Protein Homology CDS 576899 578263 . + 0 ID=cds-WP_052294234.1;Parent=gene-DOLE_RS02595;Dbxref=Genbank:WP_052294234.1;Name=WP_052294234.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.2;locus_tag=DOLE_RS02595;product=M23 family metallopeptidase;protein_id=WP_052294234.1;transl_table=11 NC_009943.1 RefSeq gene 578308 578958 . + . ID=gene-DOLE_RS02600;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=DOLE_RS02600;old_locus_tag=Dole_0513 NC_009943.1 Protein Homology CDS 578308 578958 . + 0 ID=cds-WP_012173942.1;Parent=gene-DOLE_RS02600;Dbxref=Genbank:WP_012173942.1;Name=WP_012173942.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011187352.1;locus_tag=DOLE_RS02600;product=signal peptidase I;protein_id=WP_012173942.1;transl_table=11 NC_009943.1 RefSeq gene 578968 579903 . + . ID=gene-DOLE_RS02605;Name=DOLE_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02605;old_locus_tag=Dole_0514 NC_009943.1 Protein Homology CDS 578968 579903 . + 0 ID=cds-WP_012173943.1;Parent=gene-DOLE_RS02605;Dbxref=Genbank:WP_012173943.1;Name=WP_012173943.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173943.1;locus_tag=DOLE_RS02605;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_012173943.1;transl_table=11 NC_009943.1 RefSeq gene 579890 581179 . + . ID=gene-DOLE_RS02610;Name=DOLE_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02610;old_locus_tag=Dole_0515 NC_009943.1 Protein Homology CDS 579890 581179 . + 0 ID=cds-WP_012173944.1;Parent=gene-DOLE_RS02610;Dbxref=Genbank:WP_012173944.1;Name=WP_012173944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965467.1;locus_tag=DOLE_RS02610;product=dihydroorotase;protein_id=WP_012173944.1;transl_table=11 NC_009943.1 RefSeq gene 581241 582647 . + . ID=gene-DOLE_RS02615;Name=DOLE_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02615;old_locus_tag=Dole_0516 NC_009943.1 Protein Homology CDS 581241 582647 . + 0 ID=cds-WP_012173945.1;Parent=gene-DOLE_RS02615;Dbxref=Genbank:WP_012173945.1;Name=WP_012173945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877518.1;locus_tag=DOLE_RS02615;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012173945.1;transl_table=11 NC_009943.1 RefSeq gene 583160 583603 . + . ID=gene-DOLE_RS18655;Name=DOLE_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18655;old_locus_tag=Dole_0517 NC_009943.1 Protein Homology CDS 583160 583603 . + 0 ID=cds-WP_269719161.1;Parent=gene-DOLE_RS18655;Dbxref=Genbank:WP_269719161.1;Name=WP_269719161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965161.1;locus_tag=DOLE_RS18655;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_269719161.1;transl_table=11 NC_009943.1 RefSeq gene 583892 585619 . + . ID=gene-DOLE_RS02625;Name=DOLE_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02625;old_locus_tag=Dole_0518 NC_009943.1 Protein Homology CDS 583892 585619 . + 0 ID=cds-WP_083766504.1;Parent=gene-DOLE_RS02625;Dbxref=Genbank:WP_083766504.1;Name=WP_083766504.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.2;locus_tag=DOLE_RS02625;product=glycosyltransferase family 39 protein;protein_id=WP_083766504.1;transl_table=11 NC_009943.1 RefSeq gene 585640 586812 . + . ID=gene-DOLE_RS02630;Name=DOLE_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02630;old_locus_tag=Dole_0519 NC_009943.1 Protein Homology CDS 585640 586812 . + 0 ID=cds-WP_012173948.1;Parent=gene-DOLE_RS02630;Dbxref=Genbank:WP_012173948.1;Name=WP_012173948.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: protein motif:HMM:NF024853.2;locus_tag=DOLE_RS02630;product=DsbA family protein;protein_id=WP_012173948.1;transl_table=11 NC_009943.1 RefSeq gene 586890 587945 . + . ID=gene-DOLE_RS02635;Name=DOLE_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02635;old_locus_tag=Dole_0520 NC_009943.1 Protein Homology CDS 586890 587945 . + 0 ID=cds-WP_012173949.1;Parent=gene-DOLE_RS02635;Dbxref=Genbank:WP_012173949.1;Name=WP_012173949.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF027681.2;locus_tag=DOLE_RS02635;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012173949.1;transl_table=11 NC_009943.1 RefSeq gene 587942 588670 . + . ID=gene-DOLE_RS02640;Name=DOLE_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02640;old_locus_tag=Dole_0521 NC_009943.1 Protein Homology CDS 587942 588670 . + 0 ID=cds-WP_012173950.1;Parent=gene-DOLE_RS02640;Dbxref=Genbank:WP_012173950.1;Name=WP_012173950.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012695.2;locus_tag=DOLE_RS02640;product=nucleotidyltransferase family protein;protein_id=WP_012173950.1;transl_table=11 NC_009943.1 RefSeq gene 588680 589816 . + . ID=gene-DOLE_RS02645;Name=DOLE_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02645;old_locus_tag=Dole_0522 NC_009943.1 Protein Homology CDS 588680 589816 . + 0 ID=cds-WP_012173951.1;Parent=gene-DOLE_RS02645;Dbxref=Genbank:WP_012173951.1;Name=WP_012173951.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024914.2;locus_tag=DOLE_RS02645;product=glycosyltransferase family 4 protein;protein_id=WP_012173951.1;transl_table=11 NC_009943.1 RefSeq gene 589813 590730 . + . ID=gene-DOLE_RS02650;Name=DOLE_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02650;old_locus_tag=Dole_0523 NC_009943.1 Protein Homology CDS 589813 590730 . + 0 ID=cds-WP_012173952.1;Parent=gene-DOLE_RS02650;Dbxref=Genbank:WP_012173952.1;Name=WP_012173952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027681.2;locus_tag=DOLE_RS02650;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_012173952.1;transl_table=11 NC_009943.1 RefSeq gene 590765 591793 . + . ID=gene-DOLE_RS02655;Name=DOLE_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02655;old_locus_tag=Dole_0524 NC_009943.1 Protein Homology CDS 590765 591793 . + 0 ID=cds-WP_153304339.1;Parent=gene-DOLE_RS02655;Dbxref=Genbank:WP_153304339.1;Name=WP_153304339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=DOLE_RS02655;product=glycosyltransferase;protein_id=WP_153304339.1;transl_table=11 NC_009943.1 RefSeq gene 591827 592684 . + . ID=gene-DOLE_RS02660;Name=DOLE_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02660;old_locus_tag=Dole_0525 NC_009943.1 Protein Homology CDS 591827 592684 . + 0 ID=cds-WP_012173954.1;Parent=gene-DOLE_RS02660;Dbxref=Genbank:WP_012173954.1;Name=WP_012173954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS02660;product=glycosyltransferase family 2 protein;protein_id=WP_012173954.1;transl_table=11 NC_009943.1 RefSeq gene 592707 593600 . - . ID=gene-DOLE_RS02665;Name=DOLE_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02665;old_locus_tag=Dole_0526 NC_009943.1 Protein Homology CDS 592707 593600 . - 0 ID=cds-WP_012173955.1;Parent=gene-DOLE_RS02665;Dbxref=Genbank:WP_012173955.1;Name=WP_012173955.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=DOLE_RS02665;product=glycosyltransferase family 2 protein;protein_id=WP_012173955.1;transl_table=11 NC_009943.1 RefSeq gene 593651 594388 . - . ID=gene-DOLE_RS02670;Name=DOLE_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02670;old_locus_tag=Dole_0527 NC_009943.1 Protein Homology CDS 593651 594388 . - 0 ID=cds-WP_012173956.1;Parent=gene-DOLE_RS02670;Dbxref=Genbank:WP_012173956.1;Name=WP_012173956.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF016908.2;locus_tag=DOLE_RS02670;product=FkbM family methyltransferase;protein_id=WP_012173956.1;transl_table=11 NC_009943.1 RefSeq gene 594428 595534 . - . ID=gene-DOLE_RS17830;Name=DOLE_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17830;old_locus_tag=Dole_0528 NC_009943.1 Protein Homology CDS 594428 595534 . - 0 ID=cds-WP_012173957.1;Parent=gene-DOLE_RS17830;Dbxref=Genbank:WP_012173957.1;Name=WP_012173957.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.2;locus_tag=DOLE_RS17830;product=glycosyltransferase family 1 protein;protein_id=WP_012173957.1;transl_table=11 NC_009943.1 RefSeq gene 595556 596308 . - . ID=gene-DOLE_RS02680;Name=DOLE_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02680;old_locus_tag=Dole_0529 NC_009943.1 GeneMarkS-2+ CDS 595556 596308 . - 0 ID=cds-WP_012173958.1;Parent=gene-DOLE_RS02680;Dbxref=Genbank:WP_012173958.1;Name=WP_012173958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02680;product=hypothetical protein;protein_id=WP_012173958.1;transl_table=11 NC_009943.1 RefSeq gene 596310 596960 . - . ID=gene-DOLE_RS02685;Name=DOLE_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02685;old_locus_tag=Dole_0530 NC_009943.1 GeneMarkS-2+ CDS 596310 596960 . - 0 ID=cds-WP_012173959.1;Parent=gene-DOLE_RS02685;Dbxref=Genbank:WP_012173959.1;Name=WP_012173959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02685;product=hypothetical protein;protein_id=WP_012173959.1;transl_table=11 NC_009943.1 RefSeq gene 596957 597172 . - . ID=gene-DOLE_RS02690;Name=DOLE_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02690 NC_009943.1 GeneMarkS-2+ CDS 596957 597172 . - 0 ID=cds-WP_041280314.1;Parent=gene-DOLE_RS02690;Dbxref=Genbank:WP_041280314.1;Name=WP_041280314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02690;product=hypothetical protein;protein_id=WP_041280314.1;transl_table=11 NC_009943.1 RefSeq gene 597174 598079 . - . ID=gene-DOLE_RS02695;Name=DOLE_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02695;old_locus_tag=Dole_0531 NC_009943.1 Protein Homology CDS 597174 598079 . - 0 ID=cds-WP_041280315.1;Parent=gene-DOLE_RS02695;Dbxref=Genbank:WP_041280315.1;Name=WP_041280315.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF019846.2;locus_tag=DOLE_RS02695;product=methyltransferase domain-containing protein;protein_id=WP_041280315.1;transl_table=11 NC_009943.1 RefSeq gene 598178 599527 . - . ID=gene-DOLE_RS02700;Name=DOLE_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02700;old_locus_tag=Dole_0532 NC_009943.1 Protein Homology CDS 598178 599527 . - 0 ID=cds-WP_012173961.1;Parent=gene-DOLE_RS02700;Dbxref=Genbank:WP_012173961.1;Name=WP_012173961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404494.1;locus_tag=DOLE_RS02700;product=flippase;protein_id=WP_012173961.1;transl_table=11 NC_009943.1 RefSeq gene 599535 600086 . - . ID=gene-DOLE_RS02705;Name=DOLE_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02705;old_locus_tag=Dole_0533 NC_009943.1 Protein Homology CDS 599535 600086 . - 0 ID=cds-WP_012173962.1;Parent=gene-DOLE_RS02705;Dbxref=Genbank:WP_012173962.1;Name=WP_012173962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966600.1;locus_tag=DOLE_RS02705;product=winged helix-turn-helix domain-containing protein;protein_id=WP_012173962.1;transl_table=11 NC_009943.1 RefSeq gene 600321 601037 . - . ID=gene-DOLE_RS02710;Name=DOLE_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02710;old_locus_tag=Dole_0534 NC_009943.1 Protein Homology CDS 600321 601037 . - 0 ID=cds-WP_012173963.1;Parent=gene-DOLE_RS02710;Dbxref=Genbank:WP_012173963.1;Name=WP_012173963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609989.1;locus_tag=DOLE_RS02710;product=glycosyltransferase family 2 protein;protein_id=WP_012173963.1;transl_table=11 NC_009943.1 RefSeq gene 601040 602005 . - . ID=gene-DOLE_RS02715;Name=DOLE_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02715;old_locus_tag=Dole_0535 NC_009943.1 Protein Homology CDS 601040 602005 . - 0 ID=cds-WP_012173964.1;Parent=gene-DOLE_RS02715;Dbxref=Genbank:WP_012173964.1;Name=WP_012173964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966599.1;locus_tag=DOLE_RS02715;product=glycosyltransferase family 2 protein;protein_id=WP_012173964.1;transl_table=11 NC_009943.1 RefSeq gene 602144 603961 . + . ID=gene-DOLE_RS02720;Name=DOLE_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02720;old_locus_tag=Dole_0536 NC_009943.1 Protein Homology CDS 602144 603961 . + 0 ID=cds-WP_012173965.1;Parent=gene-DOLE_RS02720;Dbxref=Genbank:WP_012173965.1;Name=WP_012173965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956843.1;locus_tag=DOLE_RS02720;product=GspE/PulE family protein;protein_id=WP_012173965.1;transl_table=11 NC_009943.1 RefSeq gene 604052 605236 . - . ID=gene-DOLE_RS02725;Name=DOLE_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02725;old_locus_tag=Dole_0537 NC_009943.1 Protein Homology CDS 604052 605236 . - 0 ID=cds-WP_012173966.1;Parent=gene-DOLE_RS02725;Dbxref=Genbank:WP_012173966.1;Name=WP_012173966.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.2;locus_tag=DOLE_RS02725;product=LysM domain-containing protein;protein_id=WP_012173966.1;transl_table=11 NC_009943.1 RefSeq gene 605473 606258 . - . ID=gene-DOLE_RS02730;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=DOLE_RS02730;old_locus_tag=Dole_0538 NC_009943.1 Protein Homology CDS 605473 606258 . - 0 ID=cds-WP_012173967.1;Parent=gene-DOLE_RS02730;Dbxref=Genbank:WP_012173967.1;Name=WP_012173967.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949754.1;locus_tag=DOLE_RS02730;product=glutamate racemase;protein_id=WP_012173967.1;transl_table=11 NC_009943.1 RefSeq gene 606242 606712 . - . ID=gene-DOLE_RS02735;Name=DOLE_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02735;old_locus_tag=Dole_0539 NC_009943.1 Protein Homology CDS 606242 606712 . - 0 ID=cds-WP_012173968.1;Parent=gene-DOLE_RS02735;Dbxref=Genbank:WP_012173968.1;Name=WP_012173968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012611126.1;locus_tag=DOLE_RS02735;product=YkgJ family cysteine cluster protein;protein_id=WP_012173968.1;transl_table=11 NC_009943.1 RefSeq gene 606702 607301 . - . ID=gene-DOLE_RS02740;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=DOLE_RS02740;old_locus_tag=Dole_0540 NC_009943.1 Protein Homology CDS 606702 607301 . - 0 ID=cds-WP_012173969.1;Parent=gene-DOLE_RS02740;Dbxref=Genbank:WP_012173969.1;Name=WP_012173969.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173969.1;locus_tag=DOLE_RS02740;product=recombination mediator RecR;protein_id=WP_012173969.1;transl_table=11 NC_009943.1 RefSeq gene 607301 607612 . - . ID=gene-DOLE_RS02745;Name=DOLE_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02745;old_locus_tag=Dole_0541 NC_009943.1 Protein Homology CDS 607301 607612 . - 0 ID=cds-WP_012173970.1;Parent=gene-DOLE_RS02745;Dbxref=Genbank:WP_012173970.1;Name=WP_012173970.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875963.1;locus_tag=DOLE_RS02745;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_012173970.1;transl_table=11 NC_009943.1 RefSeq gene 607665 609377 . - . ID=gene-DOLE_RS02750;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=DOLE_RS02750;old_locus_tag=Dole_0542 NC_009943.1 Protein Homology CDS 607665 609377 . - 0 ID=cds-WP_012173971.1;Parent=gene-DOLE_RS02750;Dbxref=Genbank:WP_012173971.1;Name=WP_012173971.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF004046.0;locus_tag=DOLE_RS02750;product=DNA polymerase III subunit gamma/tau;protein_id=WP_012173971.1;transl_table=11 NC_009943.1 RefSeq gene 609447 609537 . - . ID=gene-DOLE_RS02755;Name=DOLE_RS02755;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS02755;old_locus_tag=Dole_R0009 NC_009943.1 tRNAscan-SE tRNA 609447 609537 . - . ID=rna-DOLE_RS02755;Parent=gene-DOLE_RS02755;anticodon=(pos:complement(609500..609502));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS02755;product=tRNA-Ser NC_009943.1 tRNAscan-SE exon 609447 609537 . - . ID=exon-DOLE_RS02755-1;Parent=rna-DOLE_RS02755;anticodon=(pos:complement(609500..609502));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS02755;product=tRNA-Ser NC_009943.1 RefSeq gene 609609 609700 . - . ID=gene-DOLE_RS02760;Name=DOLE_RS02760;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS02760;old_locus_tag=Dole_R0010 NC_009943.1 tRNAscan-SE tRNA 609609 609700 . - . ID=rna-DOLE_RS02760;Parent=gene-DOLE_RS02760;anticodon=(pos:complement(609664..609666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS02760;product=tRNA-Ser NC_009943.1 tRNAscan-SE exon 609609 609700 . - . ID=exon-DOLE_RS02760-1;Parent=rna-DOLE_RS02760;anticodon=(pos:complement(609664..609666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS02760;product=tRNA-Ser NC_009943.1 RefSeq gene 609896 610621 . - . ID=gene-DOLE_RS02765;Name=DOLE_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02765;old_locus_tag=Dole_0543 NC_009943.1 Protein Homology CDS 609896 610621 . - 0 ID=cds-WP_012173972.1;Parent=gene-DOLE_RS02765;Dbxref=Genbank:WP_012173972.1;Name=WP_012173972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025217.2;locus_tag=DOLE_RS02765;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_012173972.1;transl_table=11 NC_009943.1 RefSeq gene 610618 610941 . - . ID=gene-DOLE_RS02770;Name=DOLE_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02770;old_locus_tag=Dole_0544 NC_009943.1 Protein Homology CDS 610618 610941 . - 0 ID=cds-WP_052294237.1;Parent=gene-DOLE_RS02770;Dbxref=Genbank:WP_052294237.1;Name=WP_052294237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017103.2;locus_tag=DOLE_RS02770;product=DUF721 domain-containing protein;protein_id=WP_052294237.1;transl_table=11 NC_009943.1 RefSeq gene 611123 612205 . + . ID=gene-DOLE_RS02775;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=DOLE_RS02775;old_locus_tag=Dole_0545 NC_009943.1 Protein Homology CDS 611123 612205 . + 0 ID=cds-WP_041280317.1;Parent=gene-DOLE_RS02775;Dbxref=Genbank:WP_041280317.1;Name=WP_041280317.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609864.1;locus_tag=DOLE_RS02775;product=FtsH protease activity modulator HflK;protein_id=WP_041280317.1;transl_table=11 NC_009943.1 RefSeq gene 612202 613191 . + . ID=gene-DOLE_RS02780;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=DOLE_RS02780;old_locus_tag=Dole_0546 NC_009943.1 Protein Homology CDS 612202 613191 . + 0 ID=cds-WP_012173975.1;Parent=gene-DOLE_RS02780;Dbxref=Genbank:WP_012173975.1;Name=WP_012173975.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964667.1;locus_tag=DOLE_RS02780;product=protease modulator HflC;protein_id=WP_012173975.1;transl_table=11 NC_009943.1 RefSeq gene 613349 613447 . - . ID=gene-DOLE_RS17835;Name=DOLE_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17835 NC_009943.1 Protein Homology CDS 613349 613447 . - 0 ID=cds-WP_083766505.1;Parent=gene-DOLE_RS17835;Dbxref=Genbank:WP_083766505.1;Name=WP_083766505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402602.1;locus_tag=DOLE_RS17835;product=AURKAIP1/COX24 domain-containing protein;protein_id=WP_083766505.1;transl_table=11 NC_009943.1 RefSeq gene 613585 614145 . + . ID=gene-DOLE_RS02785;Name=DOLE_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02785;old_locus_tag=Dole_0547 NC_009943.1 Protein Homology CDS 613585 614145 . + 0 ID=cds-WP_012173976.1;Parent=gene-DOLE_RS02785;Dbxref=Genbank:WP_012173976.1;Name=WP_012173976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876589.1;locus_tag=DOLE_RS02785;product=hypothetical protein;protein_id=WP_012173976.1;transl_table=11 NC_009943.1 RefSeq gene 614305 614571 . + . ID=gene-DOLE_RS02790;Name=DOLE_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02790;old_locus_tag=Dole_0548 NC_009943.1 Protein Homology CDS 614305 614571 . + 0 ID=cds-WP_012173977.1;Parent=gene-DOLE_RS02790;Dbxref=Genbank:WP_012173977.1;Name=WP_012173977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904907.1;locus_tag=DOLE_RS02790;product=FmdB family transcriptional regulator;protein_id=WP_012173977.1;transl_table=11 NC_009943.1 RefSeq gene 614684 614971 . + . ID=gene-DOLE_RS02795;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=DOLE_RS02795;old_locus_tag=Dole_0549 NC_009943.1 Protein Homology CDS 614684 614971 . + 0 ID=cds-WP_012173978.1;Parent=gene-DOLE_RS02795;Dbxref=Genbank:WP_012173978.1;Name=WP_012173978.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956858.1;locus_tag=DOLE_RS02795;product=co-chaperone GroES;protein_id=WP_012173978.1;transl_table=11 NC_009943.1 RefSeq gene 615009 616661 . + . ID=gene-DOLE_RS02800;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=DOLE_RS02800;old_locus_tag=Dole_0550 NC_009943.1 Protein Homology CDS 615009 616661 . + 0 ID=cds-WP_012173979.1;Parent=gene-DOLE_RS02800;Dbxref=Genbank:WP_012173979.1;Name=WP_012173979.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173979.1;locus_tag=DOLE_RS02800;product=chaperonin GroEL;protein_id=WP_012173979.1;transl_table=11 NC_009943.1 RefSeq gene 616751 618085 . - . ID=gene-DOLE_RS02805;Name=DOLE_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02805;old_locus_tag=Dole_0551 NC_009943.1 Protein Homology CDS 616751 618085 . - 0 ID=cds-WP_012173980.1;Parent=gene-DOLE_RS02805;Dbxref=Genbank:WP_012173980.1;Name=WP_012173980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947783.1;locus_tag=DOLE_RS02805;product=ammonium transporter;protein_id=WP_012173980.1;transl_table=11 NC_009943.1 RefSeq gene 618107 618445 . - . ID=gene-DOLE_RS02810;Name=DOLE_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02810;old_locus_tag=Dole_0552 NC_009943.1 Protein Homology CDS 618107 618445 . - 0 ID=cds-WP_012173981.1;Parent=gene-DOLE_RS02810;Dbxref=Genbank:WP_012173981.1;Name=WP_012173981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586930.1;locus_tag=DOLE_RS02810;product=P-II family nitrogen regulator;protein_id=WP_012173981.1;transl_table=11 NC_009943.1 RefSeq gene 619063 619743 . + . ID=gene-DOLE_RS02815;Name=DOLE_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02815;old_locus_tag=Dole_0553 NC_009943.1 Protein Homology CDS 619063 619743 . + 0 ID=cds-WP_012173982.1;Parent=gene-DOLE_RS02815;Dbxref=Genbank:WP_012173982.1;Name=WP_012173982.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028007.2;locus_tag=DOLE_RS02815;product=FHA domain-containing protein;protein_id=WP_012173982.1;transl_table=11 NC_009943.1 RefSeq gene 619843 620739 . + . ID=gene-DOLE_RS02820;Name=DOLE_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02820;old_locus_tag=Dole_0554 NC_009943.1 Protein Homology CDS 619843 620739 . + 0 ID=cds-WP_012173983.1;Parent=gene-DOLE_RS02820;Dbxref=Genbank:WP_012173983.1;Name=WP_012173983.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=DOLE_RS02820;product=serine/threonine-protein kinase;protein_id=WP_012173983.1;transl_table=11 NC_009943.1 RefSeq gene 620751 622967 . + . ID=gene-DOLE_RS02825;Name=DOLE_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02825;old_locus_tag=Dole_0555 NC_009943.1 GeneMarkS-2+ CDS 620751 622967 . + 0 ID=cds-WP_012173984.1;Parent=gene-DOLE_RS02825;Dbxref=Genbank:WP_012173984.1;Name=WP_012173984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02825;product=hypothetical protein;protein_id=WP_012173984.1;transl_table=11 NC_009943.1 RefSeq gene 622974 624011 . - . ID=gene-DOLE_RS02830;Name=DOLE_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02830;old_locus_tag=Dole_0556 NC_009943.1 Protein Homology CDS 622974 624011 . - 0 ID=cds-WP_012173985.1;Parent=gene-DOLE_RS02830;Dbxref=Genbank:WP_012173985.1;Name=WP_012173985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947308.1;locus_tag=DOLE_RS02830;product=nitroreductase family protein;protein_id=WP_012173985.1;transl_table=11 NC_009943.1 RefSeq gene 624421 625314 . + . ID=gene-DOLE_RS02835;Name=DOLE_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02835;old_locus_tag=Dole_0557 NC_009943.1 Protein Homology CDS 624421 625314 . + 0 ID=cds-WP_012173986.1;Parent=gene-DOLE_RS02835;Dbxref=Genbank:WP_012173986.1;Name=WP_012173986.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=DOLE_RS02835;product=TetR family transcriptional regulator;protein_id=WP_012173986.1;transl_table=11 NC_009943.1 RefSeq gene 625652 626875 . + . ID=gene-DOLE_RS02840;Name=DOLE_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02840;old_locus_tag=Dole_0558 NC_009943.1 Protein Homology CDS 625652 626875 . + 0 ID=cds-WP_012173987.1;Parent=gene-DOLE_RS02840;Dbxref=Genbank:WP_012173987.1;Name=WP_012173987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948609.1;locus_tag=DOLE_RS02840;product=thiolase family protein;protein_id=WP_012173987.1;transl_table=11 NC_009943.1 RefSeq gene 626913 628280 . + . ID=gene-DOLE_RS02845;Name=DOLE_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02845;old_locus_tag=Dole_0559 NC_009943.1 Protein Homology CDS 626913 628280 . + 0 ID=cds-WP_012173988.1;Parent=gene-DOLE_RS02845;Dbxref=Genbank:WP_012173988.1;Name=WP_012173988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947307.1;locus_tag=DOLE_RS02845;product=AMP-binding protein;protein_id=WP_012173988.1;transl_table=11 NC_009943.1 RefSeq gene 628425 630194 . + . ID=gene-DOLE_RS02850;Name=DOLE_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02850;old_locus_tag=Dole_0560 NC_009943.1 Protein Homology CDS 628425 630194 . + 0 ID=cds-WP_012173989.1;Parent=gene-DOLE_RS02850;Dbxref=Genbank:WP_012173989.1;Name=WP_012173989.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947304.1;locus_tag=DOLE_RS02850;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012173989.1;transl_table=11 NC_009943.1 RefSeq gene 630197 631093 . + . ID=gene-DOLE_RS02855;Name=DOLE_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02855;old_locus_tag=Dole_0561 NC_009943.1 Protein Homology CDS 630197 631093 . + 0 ID=cds-WP_012173990.1;Parent=gene-DOLE_RS02855;Dbxref=Genbank:WP_012173990.1;Name=WP_012173990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024585.2;locus_tag=DOLE_RS02855;product=4Fe-4S binding protein;protein_id=WP_012173990.1;transl_table=11 NC_009943.1 RefSeq gene 631443 631751 . + . ID=gene-DOLE_RS02860;Name=DOLE_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02860;old_locus_tag=Dole_0562 NC_009943.1 GeneMarkS-2+ CDS 631443 631751 . + 0 ID=cds-WP_012173991.1;Parent=gene-DOLE_RS02860;Dbxref=Genbank:WP_012173991.1;Name=WP_012173991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02860;product=hypothetical protein;protein_id=WP_012173991.1;transl_table=11 NC_009943.1 RefSeq gene 631985 632518 . - . ID=gene-DOLE_RS02865;Name=DOLE_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02865;old_locus_tag=Dole_0563 NC_009943.1 Protein Homology CDS 631985 632518 . - 0 ID=cds-WP_012173992.1;Parent=gene-DOLE_RS02865;Dbxref=Genbank:WP_012173992.1;Name=WP_012173992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163785.1;locus_tag=DOLE_RS02865;product=hypothetical protein;protein_id=WP_012173992.1;transl_table=11 NC_009943.1 RefSeq gene 632711 633049 . - . ID=gene-DOLE_RS02870;Name=DOLE_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02870;old_locus_tag=Dole_0564 NC_009943.1 Protein Homology CDS 632711 633049 . - 0 ID=cds-WP_012173993.1;Parent=gene-DOLE_RS02870;Dbxref=Genbank:WP_012173993.1;Name=WP_012173993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586930.1;locus_tag=DOLE_RS02870;product=P-II family nitrogen regulator;protein_id=WP_012173993.1;transl_table=11 NC_009943.1 RefSeq gene 633089 634375 . - . ID=gene-DOLE_RS02875;Name=DOLE_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02875;old_locus_tag=Dole_0565 NC_009943.1 Protein Homology CDS 633089 634375 . - 0 ID=cds-WP_012173994.1;Parent=gene-DOLE_RS02875;Dbxref=Genbank:WP_012173994.1;Name=WP_012173994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014955786.1;locus_tag=DOLE_RS02875;product=ammonium transporter;protein_id=WP_012173994.1;transl_table=11 NC_009943.1 RefSeq gene 634397 635731 . - . ID=gene-DOLE_RS02880;Name=DOLE_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02880;old_locus_tag=Dole_0566 NC_009943.1 Protein Homology CDS 634397 635731 . - 0 ID=cds-WP_041280319.1;Parent=gene-DOLE_RS02880;Dbxref=Genbank:WP_041280319.1;Name=WP_041280319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948397.1;locus_tag=DOLE_RS02880;product=ammonium transporter;protein_id=WP_041280319.1;transl_table=11 NC_009943.1 RefSeq gene 635768 638431 . - . ID=gene-DOLE_RS02885;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=DOLE_RS02885;old_locus_tag=Dole_0567 NC_009943.1 Protein Homology CDS 635768 638431 . - 0 ID=cds-WP_012173996.1;Parent=gene-DOLE_RS02885;Dbxref=Genbank:WP_012173996.1;Name=WP_012173996.1;Ontology_term=GO:0018177,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=protein uridylylation|0018177||IEA;inference=COORDINATES: protein motif:HMM:TIGR01693.1;locus_tag=DOLE_RS02885;product=[protein-PII] uridylyltransferase;protein_id=WP_012173996.1;transl_table=11 NC_009943.1 RefSeq gene 638772 639551 . - . ID=gene-DOLE_RS02890;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=DOLE_RS02890;old_locus_tag=Dole_0568 NC_009943.1 Protein Homology CDS 638772 639551 . - 0 ID=cds-WP_012173997.1;Parent=gene-DOLE_RS02890;Dbxref=Genbank:WP_012173997.1;Name=WP_012173997.1;Ontology_term=GO:0009435,GO:0008795,GO:0005737;gbkey=CDS;gene=nadE;go_component=cytoplasm|0005737||IEA;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020590207.1;locus_tag=DOLE_RS02890;product=NAD(+) synthase;protein_id=WP_012173997.1;transl_table=11 NC_009943.1 RefSeq gene 639626 640249 . - . ID=gene-DOLE_RS17840;Name=DOLE_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17840 NC_009943.1 GeneMarkS-2+ CDS 639626 640249 . - 0 ID=cds-WP_083766506.1;Parent=gene-DOLE_RS17840;Dbxref=Genbank:WP_083766506.1;Name=WP_083766506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17840;product=hypothetical protein;protein_id=WP_083766506.1;transl_table=11 NC_009943.1 RefSeq gene 640569 640871 . - . ID=gene-DOLE_RS02900;Name=DOLE_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02900;old_locus_tag=Dole_0569 NC_009943.1 GeneMarkS-2+ CDS 640569 640871 . - 0 ID=cds-WP_012173998.1;Parent=gene-DOLE_RS02900;Dbxref=Genbank:WP_012173998.1;Name=WP_012173998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02900;product=hypothetical protein;protein_id=WP_012173998.1;transl_table=11 NC_009943.1 RefSeq gene 640970 641386 . - . ID=gene-DOLE_RS02905;Name=DOLE_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02905;old_locus_tag=Dole_0570 NC_009943.1 Protein Homology CDS 640970 641386 . - 0 ID=cds-WP_012173999.1;Parent=gene-DOLE_RS02905;Dbxref=Genbank:WP_012173999.1;Name=WP_012173999.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015774243.1;locus_tag=DOLE_RS02905;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_012173999.1;transl_table=11 NC_009943.1 RefSeq gene 641490 642101 . + . ID=gene-DOLE_RS02910;Name=DOLE_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02910;old_locus_tag=Dole_0571 NC_009943.1 Protein Homology CDS 641490 642101 . + 0 ID=cds-WP_012174000.1;Parent=gene-DOLE_RS02910;Dbxref=Genbank:WP_012174000.1;Name=WP_012174000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012905.2;locus_tag=DOLE_RS02910;product=HAD family phosphatase;protein_id=WP_012174000.1;transl_table=11 NC_009943.1 RefSeq gene 642120 643499 . + . ID=gene-DOLE_RS02915;Name=DOLE_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02915;old_locus_tag=Dole_0572 NC_009943.1 Protein Homology CDS 642120 643499 . + 0 ID=cds-WP_012174001.1;Parent=gene-DOLE_RS02915;Dbxref=Genbank:WP_012174001.1;Name=WP_012174001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011187582.1;locus_tag=DOLE_RS02915;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_012174001.1;transl_table=11 NC_009943.1 RefSeq gene 643757 644344 . + . ID=gene-DOLE_RS16970;Name=DOLE_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16970;old_locus_tag=Dole_0573 NC_009943.1 Protein Homology CDS 643757 644344 . + 0 ID=cds-WP_083766507.1;Parent=gene-DOLE_RS16970;Dbxref=Genbank:WP_083766507.1;Name=WP_083766507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014620.2;locus_tag=DOLE_RS16970;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=WP_083766507.1;transl_table=11 NC_009943.1 RefSeq gene 644529 644849 . + . ID=gene-DOLE_RS02930;Name=DOLE_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02930;old_locus_tag=Dole_0574 NC_009943.1 Protein Homology CDS 644529 644849 . + 0 ID=cds-WP_012174003.1;Parent=gene-DOLE_RS02930;Dbxref=Genbank:WP_012174003.1;Name=WP_012174003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036294.2;locus_tag=DOLE_RS02930;product=DUF5320 domain-containing protein;protein_id=WP_012174003.1;transl_table=11 NC_009943.1 RefSeq gene 645231 645629 . + . ID=gene-DOLE_RS18380;Name=DOLE_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18380;old_locus_tag=Dole_0575 NC_009943.1 Protein Homology CDS 645231 645629 . + 0 ID=cds-WP_012174004.1;Parent=gene-DOLE_RS18380;Dbxref=Genbank:WP_012174004.1;Name=WP_012174004.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS18380;product=response regulator;protein_id=WP_012174004.1;transl_table=11 NC_009943.1 RefSeq gene 645626 646480 . + . ID=gene-DOLE_RS02940;Name=DOLE_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02940;old_locus_tag=Dole_0576 NC_009943.1 Protein Homology CDS 645626 646480 . + 0 ID=cds-WP_012174005.1;Parent=gene-DOLE_RS02940;Dbxref=Genbank:WP_012174005.1;Name=WP_012174005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957219.1;locus_tag=DOLE_RS02940;product=ATP-binding protein;protein_id=WP_012174005.1;transl_table=11 NC_009943.1 RefSeq gene 646477 647352 . + . ID=gene-DOLE_RS02945;Name=DOLE_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02945;old_locus_tag=Dole_0577 NC_009943.1 Protein Homology CDS 646477 647352 . + 0 ID=cds-WP_012174006.1;Parent=gene-DOLE_RS02945;Dbxref=Genbank:WP_012174006.1;Name=WP_012174006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723833.1;locus_tag=DOLE_RS02945;product=ATP-binding protein;protein_id=WP_012174006.1;transl_table=11 NC_009943.1 RefSeq gene 647434 647817 . + . ID=gene-DOLE_RS02950;Name=DOLE_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02950;old_locus_tag=Dole_0578 NC_009943.1 Protein Homology CDS 647434 647817 . + 0 ID=cds-WP_012174007.1;Parent=gene-DOLE_RS02950;Dbxref=Genbank:WP_012174007.1;Name=WP_012174007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963876.1;locus_tag=DOLE_RS02950;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=WP_012174007.1;transl_table=11 NC_009943.1 RefSeq gene 648076 648825 . + . ID=gene-DOLE_RS02955;Name=DOLE_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02955;old_locus_tag=Dole_0579 NC_009943.1 Protein Homology CDS 648076 648825 . + 0 ID=cds-WP_012174008.1;Parent=gene-DOLE_RS02955;Dbxref=Genbank:WP_012174008.1;Name=WP_012174008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405420.1;locus_tag=DOLE_RS02955;product=N-acyl homoserine lactonase family protein;protein_id=WP_012174008.1;transl_table=11 NC_009943.1 RefSeq gene 648853 649197 . + . ID=gene-DOLE_RS02960;Name=DOLE_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02960;old_locus_tag=Dole_0580 NC_009943.1 Protein Homology CDS 648853 649197 . + 0 ID=cds-WP_012174009.1;Parent=gene-DOLE_RS02960;Dbxref=Genbank:WP_012174009.1;Name=WP_012174009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957390.1;locus_tag=DOLE_RS02960;product=CGGC domain-containing protein;protein_id=WP_012174009.1;transl_table=11 NC_009943.1 RefSeq gene 649212 649682 . + . ID=gene-DOLE_RS02965;Name=DOLE_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02965;old_locus_tag=Dole_0581 NC_009943.1 Protein Homology CDS 649212 649682 . + 0 ID=cds-WP_012174010.1;Parent=gene-DOLE_RS02965;Dbxref=Genbank:WP_012174010.1;Name=WP_012174010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957286.1;locus_tag=DOLE_RS02965;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=WP_012174010.1;transl_table=11 NC_009943.1 RefSeq gene 649878 651311 . + . ID=gene-DOLE_RS02970;Name=DOLE_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02970;old_locus_tag=Dole_0582 NC_009943.1 Protein Homology CDS 649878 651311 . + 0 ID=cds-WP_167320831.1;Parent=gene-DOLE_RS02970;Dbxref=Genbank:WP_167320831.1;Name=WP_167320831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=DOLE_RS02970;product=AMP-binding protein;protein_id=WP_167320831.1;transl_table=11 NC_009943.1 RefSeq gene 651346 651765 . + . ID=gene-DOLE_RS02975;Name=DOLE_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02975;old_locus_tag=Dole_0583 NC_009943.1 GeneMarkS-2+ CDS 651346 651765 . + 0 ID=cds-WP_012174012.1;Parent=gene-DOLE_RS02975;Dbxref=Genbank:WP_012174012.1;Name=WP_012174012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02975;product=hypothetical protein;protein_id=WP_012174012.1;transl_table=11 NC_009943.1 RefSeq gene 651871 652713 . + . ID=gene-DOLE_RS02980;Name=DOLE_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02980;old_locus_tag=Dole_0584 NC_009943.1 GeneMarkS-2+ CDS 651871 652713 . + 0 ID=cds-WP_012174013.1;Parent=gene-DOLE_RS02980;Dbxref=Genbank:WP_012174013.1;Name=WP_012174013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS02980;product=hypothetical protein;protein_id=WP_012174013.1;transl_table=11 NC_009943.1 RefSeq gene 652724 653485 . + . ID=gene-DOLE_RS02985;Name=DOLE_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02985;old_locus_tag=Dole_0585 NC_009943.1 Protein Homology CDS 652724 653485 . + 0 ID=cds-WP_012174014.1;Parent=gene-DOLE_RS02985;Dbxref=Genbank:WP_012174014.1;Name=WP_012174014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025217.2;locus_tag=DOLE_RS02985;product=class I SAM-dependent methyltransferase;protein_id=WP_012174014.1;transl_table=11 NC_009943.1 RefSeq gene 653589 655706 . - . ID=gene-DOLE_RS02990;Name=DOLE_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02990;old_locus_tag=Dole_0586 NC_009943.1 Protein Homology CDS 653589 655706 . - 0 ID=cds-WP_012174015.1;Parent=gene-DOLE_RS02990;Dbxref=Genbank:WP_012174015.1;Name=WP_012174015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589157.1;locus_tag=DOLE_RS02990;product=acetate--CoA ligase family protein;protein_id=WP_012174015.1;transl_table=11 NC_009943.1 RefSeq gene 655802 657517 . - . ID=gene-DOLE_RS02995;Name=DOLE_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS02995;old_locus_tag=Dole_0587 NC_009943.1 Protein Homology CDS 655802 657517 . - 0 ID=cds-WP_012174016.1;Parent=gene-DOLE_RS02995;Dbxref=Genbank:WP_012174016.1;Name=WP_012174016.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013961.2;locus_tag=DOLE_RS02995;product=transglutaminase-like domain-containing protein;protein_id=WP_012174016.1;transl_table=11 NC_009943.1 RefSeq gene 657664 658968 . - . ID=gene-DOLE_RS03000;Name=DOLE_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03000;old_locus_tag=Dole_0588 NC_009943.1 Protein Homology CDS 657664 658968 . - 0 ID=cds-WP_012174017.1;Parent=gene-DOLE_RS03000;Dbxref=Genbank:WP_012174017.1;Name=WP_012174017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072434.1;locus_tag=DOLE_RS03000;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_012174017.1;transl_table=11 NC_009943.1 RefSeq gene 659190 660308 . + . ID=gene-DOLE_RS03005;Name=DOLE_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03005;old_locus_tag=Dole_0589 NC_009943.1 Protein Homology CDS 659190 660308 . + 0 ID=cds-WP_153304340.1;Parent=gene-DOLE_RS03005;Dbxref=Genbank:WP_153304340.1;Name=WP_153304340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610995.1;locus_tag=DOLE_RS03005;product=DUF362 domain-containing protein;protein_id=WP_153304340.1;transl_table=11 NC_009943.1 RefSeq gene 660336 661238 . + . ID=gene-DOLE_RS03010;Name=DOLE_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03010;old_locus_tag=Dole_0590 NC_009943.1 Protein Homology CDS 660336 661238 . + 0 ID=cds-WP_041280768.1;Parent=gene-DOLE_RS03010;Dbxref=Genbank:WP_041280768.1;Name=WP_041280768.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014114.2;locus_tag=DOLE_RS03010;product=LD-carboxypeptidase;protein_id=WP_041280768.1;transl_table=11 NC_009943.1 RefSeq gene 661863 662945 . + . ID=gene-DOLE_RS03015;Name=DOLE_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03015;old_locus_tag=Dole_0591 NC_009943.1 Protein Homology CDS 661863 662945 . + 0 ID=cds-WP_012174020.1;Parent=gene-DOLE_RS03015;Dbxref=Genbank:WP_012174020.1;Name=WP_012174020.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=DOLE_RS03015;product=serine hydrolase domain-containing protein;protein_id=WP_012174020.1;transl_table=11 NC_009943.1 RefSeq gene 663102 664145 . + . ID=gene-DOLE_RS03020;Name=DOLE_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03020;old_locus_tag=Dole_0592 NC_009943.1 Protein Homology CDS 663102 664145 . + 0 ID=cds-WP_012174021.1;Parent=gene-DOLE_RS03020;Dbxref=Genbank:WP_012174021.1;Name=WP_012174021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905343.1;locus_tag=DOLE_RS03020;product=rod shape-determining protein;protein_id=WP_012174021.1;transl_table=11 NC_009943.1 RefSeq gene 664193 665026 . + . ID=gene-DOLE_RS03025;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=DOLE_RS03025;old_locus_tag=Dole_0593 NC_009943.1 Protein Homology CDS 664193 665026 . + 0 ID=cds-WP_012174022.1;Parent=gene-DOLE_RS03025;Dbxref=Genbank:WP_012174022.1;Name=WP_012174022.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: protein motif:HMM:TIGR00219.1;locus_tag=DOLE_RS03025;product=rod shape-determining protein MreC;protein_id=WP_012174022.1;transl_table=11 NC_009943.1 RefSeq gene 665039 665542 . + . ID=gene-DOLE_RS03030;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=DOLE_RS03030;old_locus_tag=Dole_0594 NC_009943.1 Protein Homology CDS 665039 665542 . + 0 ID=cds-WP_012174023.1;Parent=gene-DOLE_RS03030;Dbxref=Genbank:WP_012174023.1;Name=WP_012174023.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: protein motif:HMM:NF016019.2;locus_tag=DOLE_RS03030;product=rod shape-determining protein MreD;protein_id=WP_012174023.1;transl_table=11 NC_009943.1 RefSeq gene 665754 667595 . + . ID=gene-DOLE_RS03035;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=DOLE_RS03035;old_locus_tag=Dole_0595 NC_009943.1 Protein Homology CDS 665754 667595 . + 0 ID=cds-WP_232362724.1;Parent=gene-DOLE_RS03035;Dbxref=Genbank:WP_232362724.1;Name=WP_232362724.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905340.1;locus_tag=DOLE_RS03035;product=penicillin-binding protein 2;protein_id=WP_232362724.1;transl_table=11 NC_009943.1 RefSeq gene 667592 668698 . + . ID=gene-DOLE_RS03040;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=DOLE_RS03040;old_locus_tag=Dole_0596 NC_009943.1 Protein Homology CDS 667592 668698 . + 0 ID=cds-WP_012174025.1;Parent=gene-DOLE_RS03040;Dbxref=Genbank:WP_012174025.1;Name=WP_012174025.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957459.1;locus_tag=DOLE_RS03040;product=rod shape-determining protein RodA;protein_id=WP_012174025.1;transl_table=11 NC_009943.1 RefSeq gene 668796 669161 . + . ID=gene-DOLE_RS03045;Name=DOLE_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03045;old_locus_tag=Dole_0597 NC_009943.1 Protein Homology CDS 668796 669161 . + 0 ID=cds-WP_012174026.1;Parent=gene-DOLE_RS03045;Dbxref=Genbank:WP_012174026.1;Name=WP_012174026.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016408.2;locus_tag=DOLE_RS03045;product=polymer-forming cytoskeletal protein;protein_id=WP_012174026.1;transl_table=11 NC_009943.1 RefSeq gene 669338 669856 . + . ID=gene-DOLE_RS03050;Name=DOLE_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03050;old_locus_tag=Dole_0598 NC_009943.1 Protein Homology CDS 669338 669856 . + 0 ID=cds-WP_012174027.1;Parent=gene-DOLE_RS03050;Dbxref=Genbank:WP_012174027.1;Name=WP_012174027.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012645.2;locus_tag=DOLE_RS03050;product=H+transporting two-sector ATPase B/B' subunit;protein_id=WP_012174027.1;transl_table=11 NC_009943.1 RefSeq gene 669853 670455 . + . ID=gene-DOLE_RS03055;Name=DOLE_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03055;old_locus_tag=Dole_0599 NC_009943.1 Protein Homology CDS 669853 670455 . + 0 ID=cds-WP_012174028.1;Parent=gene-DOLE_RS03055;Dbxref=Genbank:WP_012174028.1;Name=WP_012174028.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012645.2;locus_tag=DOLE_RS03055;product=ATP synthase F0 subunit B;protein_id=WP_012174028.1;transl_table=11 NC_009943.1 RefSeq gene 670455 671006 . + . ID=gene-DOLE_RS03060;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=DOLE_RS03060;old_locus_tag=Dole_0600 NC_009943.1 Protein Homology CDS 670455 671006 . + 0 ID=cds-WP_012174029.1;Parent=gene-DOLE_RS03060;Dbxref=Genbank:WP_012174029.1;Name=WP_012174029.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpH;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174029.1;locus_tag=DOLE_RS03060;product=ATP synthase F1 subunit delta;protein_id=WP_012174029.1;transl_table=11 NC_009943.1 RefSeq gene 671006 672523 . + . ID=gene-DOLE_RS03065;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=DOLE_RS03065;old_locus_tag=Dole_0601 NC_009943.1 Protein Homology CDS 671006 672523 . + 0 ID=cds-WP_012174030.1;Parent=gene-DOLE_RS03065;Dbxref=Genbank:WP_012174030.1;Name=WP_012174030.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174030.1;locus_tag=DOLE_RS03065;product=F0F1 ATP synthase subunit alpha;protein_id=WP_012174030.1;transl_table=11 NC_009943.1 RefSeq gene 672566 673462 . + . ID=gene-DOLE_RS03070;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=DOLE_RS03070;old_locus_tag=Dole_0602 NC_009943.1 Protein Homology CDS 672566 673462 . + 0 ID=cds-WP_012174031.1;Parent=gene-DOLE_RS03070;Dbxref=Genbank:WP_012174031.1;Name=WP_012174031.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpG;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174031.1;locus_tag=DOLE_RS03070;product=ATP synthase F1 subunit gamma;protein_id=WP_012174031.1;transl_table=11 NC_009943.1 RefSeq gene 673501 674904 . + . ID=gene-DOLE_RS03075;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=DOLE_RS03075;old_locus_tag=Dole_0603 NC_009943.1 Protein Homology CDS 673501 674904 . + 0 ID=cds-WP_012174032.1;Parent=gene-DOLE_RS03075;Dbxref=Genbank:WP_012174032.1;Name=WP_012174032.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174032.1;locus_tag=DOLE_RS03075;product=F0F1 ATP synthase subunit beta;protein_id=WP_012174032.1;transl_table=11 NC_009943.1 RefSeq gene 674928 675329 . + . ID=gene-DOLE_RS03080;Name=DOLE_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03080;old_locus_tag=Dole_0604 NC_009943.1 Protein Homology CDS 674928 675329 . + 0 ID=cds-WP_012174033.1;Parent=gene-DOLE_RS03080;Dbxref=Genbank:WP_012174033.1;Name=WP_012174033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174033.1;locus_tag=DOLE_RS03080;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_012174033.1;transl_table=11 NC_009943.1 RefSeq gene 675481 676245 . + . ID=gene-DOLE_RS03085;Name=DOLE_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03085;old_locus_tag=Dole_0605 NC_009943.1 Protein Homology CDS 675481 676245 . + 0 ID=cds-WP_153304341.1;Parent=gene-DOLE_RS03085;Dbxref=Genbank:WP_153304341.1;Name=WP_153304341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012695.2;locus_tag=DOLE_RS03085;product=NTP transferase domain-containing protein;protein_id=WP_153304341.1;transl_table=11 NC_009943.1 RefSeq gene 676293 676568 . + . ID=gene-DOLE_RS03090;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=DOLE_RS03090;old_locus_tag=Dole_0606 NC_009943.1 Protein Homology CDS 676293 676568 . + 0 ID=cds-WP_012174035.1;Parent=gene-DOLE_RS03090;Dbxref=Genbank:WP_012174035.1;Name=WP_012174035.1;Ontology_term=GO:0043093,GO:0090529,GO:0005737;gbkey=CDS;gene=zapB;go_component=cytoplasm|0005737||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: protein motif:HMM:NF017786.2;locus_tag=DOLE_RS03090;product=cell division protein ZapB;protein_id=WP_012174035.1;transl_table=11 NC_009943.1 RefSeq gene 676602 676892 . + . ID=gene-DOLE_RS03095;Name=DOLE_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03095;old_locus_tag=Dole_0607 NC_009943.1 Protein Homology CDS 676602 676892 . + 0 ID=cds-WP_012174036.1;Parent=gene-DOLE_RS03095;Dbxref=Genbank:WP_012174036.1;Name=WP_012174036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017016.2;locus_tag=DOLE_RS03095;product=cell division protein ZapA;protein_id=WP_012174036.1;transl_table=11 NC_009943.1 RefSeq gene 676961 677141 . + . ID=gene-DOLE_RS17850;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=DOLE_RS17850 NC_009943.1 cmsearch ncRNA 676961 677141 . + . ID=rna-DOLE_RS17850;Parent=gene-DOLE_RS17850;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS17850;product=6S RNA NC_009943.1 cmsearch exon 676961 677141 . + . ID=exon-DOLE_RS17850-1;Parent=rna-DOLE_RS17850;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS17850;product=6S RNA NC_009943.1 RefSeq gene 677324 678886 . + . ID=gene-DOLE_RS03100;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=DOLE_RS03100;old_locus_tag=Dole_0608 NC_009943.1 Protein Homology CDS 677324 678886 . + 0 ID=cds-WP_012174037.1;Parent=gene-DOLE_RS03100;Dbxref=Genbank:WP_012174037.1;Name=WP_012174037.1;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=endoribonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585663.1;locus_tag=DOLE_RS03100;product=ribonuclease Y;protein_id=WP_012174037.1;transl_table=11 NC_009943.1 RefSeq gene 679115 680416 . + . ID=gene-DOLE_RS03105;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=DOLE_RS03105;old_locus_tag=Dole_0609 NC_009943.1 Protein Homology CDS 679115 680416 . + 0 ID=cds-WP_012174038.1;Parent=gene-DOLE_RS03105;Dbxref=Genbank:WP_012174038.1;Name=WP_012174038.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174038.1;locus_tag=DOLE_RS03105;product=tyrosine--tRNA ligase;protein_id=WP_012174038.1;transl_table=11 NC_009943.1 RefSeq gene 680913 682475 . + . ID=gene-DOLE_RS03110;Name=DOLE_RS03110;gbkey=Gene;gene_biotype=rRNA;locus_tag=DOLE_RS03110;old_locus_tag=Dole_R0011 NC_009943.1 cmsearch rRNA 680913 682475 . + . ID=rna-DOLE_RS03110;Parent=gene-DOLE_RS03110;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS03110;product=16S ribosomal RNA NC_009943.1 cmsearch exon 680913 682475 . + . ID=exon-DOLE_RS03110-1;Parent=rna-DOLE_RS03110;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS03110;product=16S ribosomal RNA NC_009943.1 RefSeq gene 682656 682733 . + . ID=gene-DOLE_RS03115;Name=DOLE_RS03115;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS03115;old_locus_tag=Dole_R0012 NC_009943.1 tRNAscan-SE tRNA 682656 682733 . + . ID=rna-DOLE_RS03115;Parent=gene-DOLE_RS03115;anticodon=(pos:682691..682693);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03115;product=tRNA-Ile NC_009943.1 tRNAscan-SE exon 682656 682733 . + . ID=exon-DOLE_RS03115-1;Parent=rna-DOLE_RS03115;anticodon=(pos:682691..682693);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03115;product=tRNA-Ile NC_009943.1 RefSeq gene 682852 682927 . + . ID=gene-DOLE_RS03120;Name=DOLE_RS03120;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS03120;old_locus_tag=Dole_R0013 NC_009943.1 tRNAscan-SE tRNA 682852 682927 . + . ID=rna-DOLE_RS03120;Parent=gene-DOLE_RS03120;anticodon=(pos:682885..682887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03120;product=tRNA-Ala NC_009943.1 tRNAscan-SE exon 682852 682927 . + . ID=exon-DOLE_RS03120-1;Parent=rna-DOLE_RS03120;anticodon=(pos:682885..682887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03120;product=tRNA-Ala NC_009943.1 RefSeq gene 683111 686132 . + . ID=gene-DOLE_RS03125;Name=DOLE_RS03125;gbkey=Gene;gene_biotype=rRNA;locus_tag=DOLE_RS03125;old_locus_tag=Dole_R0014 NC_009943.1 cmsearch rRNA 683111 686132 . + . ID=rna-DOLE_RS03125;Parent=gene-DOLE_RS03125;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS03125;product=23S ribosomal RNA NC_009943.1 cmsearch exon 683111 686132 . + . ID=exon-DOLE_RS03125-1;Parent=rna-DOLE_RS03125;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS03125;product=23S ribosomal RNA NC_009943.1 RefSeq gene 686201 686317 . + . ID=gene-DOLE_RS03130;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=DOLE_RS03130;old_locus_tag=Dole_R0015 NC_009943.1 cmsearch rRNA 686201 686317 . + . ID=rna-DOLE_RS03130;Parent=gene-DOLE_RS03130;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS03130;product=5S ribosomal RNA NC_009943.1 cmsearch exon 686201 686317 . + . ID=exon-DOLE_RS03130-1;Parent=rna-DOLE_RS03130;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS03130;product=5S ribosomal RNA NC_009943.1 RefSeq gene 686449 688872 . + . ID=gene-DOLE_RS03135;Name=DOLE_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03135;old_locus_tag=Dole_0610 NC_009943.1 Protein Homology CDS 686449 688872 . + 0 ID=cds-WP_012174039.1;Parent=gene-DOLE_RS03135;Dbxref=Genbank:WP_012174039.1;Name=WP_012174039.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947076.1;locus_tag=DOLE_RS03135;product=MMPL family transporter;protein_id=WP_012174039.1;transl_table=11 NC_009943.1 RefSeq gene 689453 690847 . + . ID=gene-DOLE_RS03140;Name=DOLE_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03140;old_locus_tag=Dole_0611 NC_009943.1 Protein Homology CDS 689453 690847 . + 0 ID=cds-WP_012174040.1;Parent=gene-DOLE_RS03140;Dbxref=Genbank:WP_012174040.1;Name=WP_012174040.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01844.1;locus_tag=DOLE_RS03140;product=TolC family outer membrane protein;protein_id=WP_012174040.1;transl_table=11 NC_009943.1 RefSeq gene 690896 729121 . + . ID=gene-DOLE_RS03145;Name=DOLE_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03145;old_locus_tag=Dole_0612 NC_009943.1 Protein Homology CDS 690896 729121 . + 0 ID=cds-WP_012174041.1;Parent=gene-DOLE_RS03145;Dbxref=Genbank:WP_012174041.1;Name=WP_012174041.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025611.2;locus_tag=DOLE_RS03145;product=DUF4347 domain-containing protein;protein_id=WP_012174041.1;transl_table=11 NC_009943.1 RefSeq gene 729175 730302 . + . ID=gene-DOLE_RS03150;Name=DOLE_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03150;old_locus_tag=Dole_0613 NC_009943.1 GeneMarkS-2+ CDS 729175 730302 . + 0 ID=cds-WP_012174042.1;Parent=gene-DOLE_RS03150;Dbxref=Genbank:WP_012174042.1;Name=WP_012174042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03150;product=hypothetical protein;protein_id=WP_012174042.1;transl_table=11 NC_009943.1 RefSeq gene 730299 731225 . + . ID=gene-DOLE_RS03155;Name=DOLE_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03155;old_locus_tag=Dole_0614 NC_009943.1 Protein Homology CDS 730299 731225 . + 0 ID=cds-WP_012174043.1;Parent=gene-DOLE_RS03155;Dbxref=Genbank:WP_012174043.1;Name=WP_012174043.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS03155;product=radical SAM protein;protein_id=WP_012174043.1;transl_table=11 NC_009943.1 RefSeq gene 731215 732078 . + . ID=gene-DOLE_RS03160;Name=DOLE_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03160;old_locus_tag=Dole_0615 NC_009943.1 GeneMarkS-2+ CDS 731215 732078 . + 0 ID=cds-WP_012174044.1;Parent=gene-DOLE_RS03160;Dbxref=Genbank:WP_012174044.1;Name=WP_012174044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03160;product=hypothetical protein;protein_id=WP_012174044.1;transl_table=11 NC_009943.1 RefSeq gene 732065 733105 . + . ID=gene-DOLE_RS03165;Name=DOLE_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03165;old_locus_tag=Dole_0616 NC_009943.1 Protein Homology CDS 732065 733105 . + 0 ID=cds-WP_012174045.1;Parent=gene-DOLE_RS03165;Dbxref=Genbank:WP_012174045.1;Name=WP_012174045.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: protein motif:HMM:NF013087.2;locus_tag=DOLE_RS03165;product=methyltransferase;protein_id=WP_012174045.1;transl_table=11 NC_009943.1 RefSeq gene 733267 733620 . + . ID=gene-DOLE_RS03170;Name=DOLE_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03170;old_locus_tag=Dole_0617 NC_009943.1 Protein Homology CDS 733267 733620 . + 0 ID=cds-WP_012174046.1;Parent=gene-DOLE_RS03170;Dbxref=Genbank:WP_012174046.1;Name=WP_012174046.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023376.2;locus_tag=DOLE_RS03170;product=DUF3467 domain-containing protein;protein_id=WP_012174046.1;transl_table=11 NC_009943.1 RefSeq gene 733876 735723 . + . ID=gene-DOLE_RS03175;Name=DOLE_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03175;old_locus_tag=Dole_0618 NC_009943.1 Protein Homology CDS 733876 735723 . + 0 ID=cds-WP_012174047.1;Parent=gene-DOLE_RS03175;Dbxref=Genbank:WP_012174047.1;Name=WP_012174047.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027890.2;locus_tag=DOLE_RS03175;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_012174047.1;transl_table=11 NC_009943.1 RefSeq gene 735736 737883 . + . ID=gene-DOLE_RS03180;Name=DOLE_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03180;old_locus_tag=Dole_0619 NC_009943.1 Protein Homology CDS 735736 737883 . + 0 ID=cds-WP_012174048.1;Parent=gene-DOLE_RS03180;Dbxref=Genbank:WP_012174048.1;Name=WP_012174048.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017239.2;locus_tag=DOLE_RS03180;product=PqqD family peptide modification chaperone;protein_id=WP_012174048.1;transl_table=11 NC_009943.1 RefSeq gene 737883 739889 . + . ID=gene-DOLE_RS03185;Name=DOLE_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03185;old_locus_tag=Dole_0620 NC_009943.1 Protein Homology CDS 737883 739889 . + 0 ID=cds-WP_012174049.1;Parent=gene-DOLE_RS03185;Dbxref=Genbank:WP_012174049.1;Name=WP_012174049.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019156.2;locus_tag=DOLE_RS03185;product=preprotein translocase subunit SecA;protein_id=WP_012174049.1;transl_table=11 NC_009943.1 RefSeq gene 739960 740697 . + . ID=gene-DOLE_RS03190;Name=DOLE_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03190;old_locus_tag=Dole_0621 NC_009943.1 Protein Homology CDS 739960 740697 . + 0 ID=cds-WP_012174050.1;Parent=gene-DOLE_RS03190;Dbxref=Genbank:WP_012174050.1;Name=WP_012174050.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=DOLE_RS03190;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012174050.1;transl_table=11 NC_009943.1 RefSeq gene 740817 741539 . - . ID=gene-DOLE_RS03195;Name=DOLE_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03195;old_locus_tag=Dole_0622 NC_009943.1 Protein Homology CDS 740817 741539 . - 0 ID=cds-WP_012174051.1;Parent=gene-DOLE_RS03195;Dbxref=Genbank:WP_012174051.1;Name=WP_012174051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020590135.1;locus_tag=DOLE_RS03195;product=response regulator transcription factor;protein_id=WP_012174051.1;transl_table=11 NC_009943.1 RefSeq gene 741536 742507 . - . ID=gene-DOLE_RS03200;Name=DOLE_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03200;old_locus_tag=Dole_0623 NC_009943.1 Protein Homology CDS 741536 742507 . - 0 ID=cds-WP_012174052.1;Parent=gene-DOLE_RS03200;Dbxref=Genbank:WP_012174052.1;Name=WP_012174052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878488.1;locus_tag=DOLE_RS03200;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_012174052.1;transl_table=11 NC_009943.1 RefSeq gene 742620 743099 . - . ID=gene-DOLE_RS16975;Name=DOLE_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16975;old_locus_tag=Dole_0624 NC_009943.1 GeneMarkS-2+ CDS 742620 743099 . - 0 ID=cds-WP_012174053.1;Parent=gene-DOLE_RS16975;Dbxref=Genbank:WP_012174053.1;Name=WP_012174053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16975;product=cereblon family protein;protein_id=WP_012174053.1;transl_table=11 NC_009943.1 RefSeq gene 743124 744140 . - . ID=gene-DOLE_RS03210;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=DOLE_RS03210;old_locus_tag=Dole_0625 NC_009943.1 Protein Homology CDS 743124 744140 . - 0 ID=cds-WP_052294242.1;Parent=gene-DOLE_RS03210;Dbxref=Genbank:WP_052294242.1;Name=WP_052294242.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948720.1;locus_tag=DOLE_RS03210;product=endolytic transglycosylase MltG;protein_id=WP_052294242.1;transl_table=11 NC_009943.1 RefSeq gene 744366 745526 . + . ID=gene-DOLE_RS03215;Name=DOLE_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03215;old_locus_tag=Dole_0626 NC_009943.1 Protein Homology CDS 744366 745526 . + 0 ID=cds-WP_012174055.1;Parent=gene-DOLE_RS03215;Dbxref=Genbank:WP_012174055.1;Name=WP_012174055.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947312.1;locus_tag=DOLE_RS03215;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012174055.1;transl_table=11 NC_009943.1 RefSeq gene 745533 746345 . + . ID=gene-DOLE_RS03220;Name=DOLE_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03220;old_locus_tag=Dole_0627 NC_009943.1 Protein Homology CDS 745533 746345 . + 0 ID=cds-WP_012174056.1;Parent=gene-DOLE_RS03220;Dbxref=Genbank:WP_012174056.1;Name=WP_012174056.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012402.2;locus_tag=DOLE_RS03220;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_012174056.1;transl_table=11 NC_009943.1 RefSeq gene 746511 746750 . + . ID=gene-DOLE_RS03225;Name=DOLE_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03225;old_locus_tag=Dole_0628 NC_009943.1 Protein Homology CDS 746511 746750 . + 0 ID=cds-WP_012174057.1;Parent=gene-DOLE_RS03225;Dbxref=Genbank:WP_012174057.1;Name=WP_012174057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957335.1;locus_tag=DOLE_RS03225;product=AtpZ/AtpI family protein;protein_id=WP_012174057.1;transl_table=11 NC_009943.1 RefSeq gene 746743 747138 . + . ID=gene-DOLE_RS03230;Name=DOLE_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03230;old_locus_tag=Dole_0629 NC_009943.1 Protein Homology CDS 746743 747138 . + 0 ID=cds-WP_012174058.1;Parent=gene-DOLE_RS03230;Dbxref=Genbank:WP_012174058.1;Name=WP_012174058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877024.1;locus_tag=DOLE_RS03230;product=ATP synthase subunit I;protein_id=WP_012174058.1;transl_table=11 NC_009943.1 RefSeq gene 747140 747829 . + . ID=gene-DOLE_RS03235;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=DOLE_RS03235;old_locus_tag=Dole_0630 NC_009943.1 Protein Homology CDS 747140 747829 . + 0 ID=cds-WP_012174059.1;Parent=gene-DOLE_RS03235;Dbxref=Genbank:WP_012174059.1;Name=WP_012174059.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpB;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174059.1;locus_tag=DOLE_RS03235;product=F0F1 ATP synthase subunit A;protein_id=WP_012174059.1;transl_table=11 NC_009943.1 RefSeq gene 747924 748214 . + . ID=gene-DOLE_RS03240;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=DOLE_RS03240;old_locus_tag=Dole_0631 NC_009943.1 Protein Homology CDS 747924 748214 . + 0 ID=cds-WP_012174060.1;Parent=gene-DOLE_RS03240;Dbxref=Genbank:WP_012174060.1;Name=WP_012174060.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174060.1;locus_tag=DOLE_RS03240;product=ATP synthase F0 subunit C;protein_id=WP_012174060.1;transl_table=11 NC_009943.1 RefSeq gene 748788 751619 . - . ID=gene-DOLE_RS03250;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=DOLE_RS03250;old_locus_tag=Dole_0632 NC_009943.1 Protein Homology CDS 748788 751619 . - 0 ID=cds-WP_012174061.1;Parent=gene-DOLE_RS03250;Dbxref=Genbank:WP_012174061.1;Name=WP_012174061.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957765.1;locus_tag=DOLE_RS03250;product=excinuclease ABC subunit UvrA;protein_id=WP_012174061.1;transl_table=11 NC_009943.1 RefSeq gene 751735 752751 . - . ID=gene-DOLE_RS03255;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=DOLE_RS03255;old_locus_tag=Dole_0633 NC_009943.1 Protein Homology CDS 751735 752751 . - 0 ID=cds-WP_012174062.1;Parent=gene-DOLE_RS03255;Dbxref=Genbank:WP_012174062.1;Name=WP_012174062.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174062.1;locus_tag=DOLE_RS03255;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_012174062.1;transl_table=11 NC_009943.1 RefSeq gene 752822 753709 . - . ID=gene-DOLE_RS03260;Name=DOLE_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03260;old_locus_tag=Dole_0634 NC_009943.1 GeneMarkS-2+ CDS 752822 753709 . - 0 ID=cds-WP_012174063.1;Parent=gene-DOLE_RS03260;Dbxref=Genbank:WP_012174063.1;Name=WP_012174063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03260;product=hypothetical protein;protein_id=WP_012174063.1;transl_table=11 NC_009943.1 RefSeq gene 753719 755017 . - . ID=gene-DOLE_RS03265;Name=DOLE_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03265;old_locus_tag=Dole_0635 NC_009943.1 Protein Homology CDS 753719 755017 . - 0 ID=cds-WP_012174064.1;Parent=gene-DOLE_RS03265;Dbxref=Genbank:WP_012174064.1;Name=WP_012174064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610784.1;locus_tag=DOLE_RS03265;product=CBS domain-containing protein;protein_id=WP_012174064.1;transl_table=11 NC_009943.1 RefSeq gene 755202 756506 . + . ID=gene-DOLE_RS03270;Name=DOLE_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03270;old_locus_tag=Dole_0636 NC_009943.1 Protein Homology CDS 755202 756506 . + 0 ID=cds-WP_232362725.1;Parent=gene-DOLE_RS03270;Dbxref=Genbank:WP_232362725.1;Name=WP_232362725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903625.1;locus_tag=DOLE_RS03270;product=site-specific integrase;protein_id=WP_232362725.1;transl_table=11 NC_009943.1 RefSeq gene 756499 757419 . + . ID=gene-DOLE_RS03275;Name=DOLE_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03275;old_locus_tag=Dole_0637 NC_009943.1 GeneMarkS-2+ CDS 756499 757419 . + 0 ID=cds-WP_012174066.1;Parent=gene-DOLE_RS03275;Dbxref=Genbank:WP_012174066.1;Name=WP_012174066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03275;product=hypothetical protein;protein_id=WP_012174066.1;transl_table=11 NC_009943.1 RefSeq gene 757637 757852 . + . ID=gene-DOLE_RS03280;Name=DOLE_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03280 NC_009943.1 GeneMarkS-2+ CDS 757637 757852 . + 0 ID=cds-WP_041280323.1;Parent=gene-DOLE_RS03280;Dbxref=Genbank:WP_041280323.1;Name=WP_041280323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03280;product=hypothetical protein;protein_id=WP_041280323.1;transl_table=11 NC_009943.1 RefSeq gene 758279 758809 . + . ID=gene-DOLE_RS03285;Name=DOLE_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03285;old_locus_tag=Dole_0639 NC_009943.1 GeneMarkS-2+ CDS 758279 758809 . + 0 ID=cds-WP_041280324.1;Parent=gene-DOLE_RS03285;Dbxref=Genbank:WP_041280324.1;Name=WP_041280324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03285;product=hypothetical protein;protein_id=WP_041280324.1;transl_table=11 NC_009943.1 RefSeq gene 759461 760621 . - . ID=gene-DOLE_RS16980;Name=DOLE_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16980;old_locus_tag=Dole_0640 NC_009943.1 Protein Homology CDS 759461 760621 . - 0 ID=cds-WP_012174069.1;Parent=gene-DOLE_RS16980;Dbxref=Genbank:WP_012174069.1;Name=WP_012174069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017470.2;locus_tag=DOLE_RS16980;product=DUF805 domain-containing protein;protein_id=WP_012174069.1;transl_table=11 NC_009943.1 RefSeq gene 761008 761418 . - . ID=gene-DOLE_RS03295;Name=DOLE_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03295;old_locus_tag=Dole_0641 NC_009943.1 GeneMarkS-2+ CDS 761008 761418 . - 0 ID=cds-WP_012174070.1;Parent=gene-DOLE_RS03295;Dbxref=Genbank:WP_012174070.1;Name=WP_012174070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03295;product=hypothetical protein;protein_id=WP_012174070.1;transl_table=11 NC_009943.1 RefSeq gene 761429 761692 . - . ID=gene-DOLE_RS03300;Name=DOLE_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03300;old_locus_tag=Dole_0642 NC_009943.1 GeneMarkS-2+ CDS 761429 761692 . - 0 ID=cds-WP_041280325.1;Parent=gene-DOLE_RS03300;Dbxref=Genbank:WP_041280325.1;Name=WP_041280325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03300;product=hypothetical protein;protein_id=WP_041280325.1;transl_table=11 NC_009943.1 RefSeq gene 761819 762394 . - . ID=gene-DOLE_RS03305;Name=DOLE_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03305 NC_009943.1 GeneMarkS-2+ CDS 761819 762394 . - 0 ID=cds-WP_153304344.1;Parent=gene-DOLE_RS03305;Dbxref=Genbank:WP_153304344.1;Name=WP_153304344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03305;product=hypothetical protein;protein_id=WP_153304344.1;transl_table=11 NC_009943.1 RefSeq gene 762406 763248 . - . ID=gene-DOLE_RS03310;Name=DOLE_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03310;old_locus_tag=Dole_0643 NC_009943.1 GeneMarkS-2+ CDS 762406 763248 . - 0 ID=cds-WP_041280327.1;Parent=gene-DOLE_RS03310;Dbxref=Genbank:WP_041280327.1;Name=WP_041280327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03310;product=hypothetical protein;protein_id=WP_041280327.1;transl_table=11 NC_009943.1 RefSeq gene 763401 763476 . - . ID=gene-DOLE_RS03315;Name=DOLE_RS03315;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS03315;old_locus_tag=Dole_R0016 NC_009943.1 tRNAscan-SE tRNA 763401 763476 . - . ID=rna-DOLE_RS03315;Parent=gene-DOLE_RS03315;anticodon=(pos:complement(763441..763443));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03315;product=tRNA-Arg NC_009943.1 tRNAscan-SE exon 763401 763476 . - . ID=exon-DOLE_RS03315-1;Parent=rna-DOLE_RS03315;anticodon=(pos:complement(763441..763443));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03315;product=tRNA-Arg NC_009943.1 RefSeq gene 763689 764855 . + . ID=gene-DOLE_RS03320;Name=DOLE_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03320;old_locus_tag=Dole_0644 NC_009943.1 Protein Homology CDS 763689 764855 . + 0 ID=cds-WP_012174073.1;Parent=gene-DOLE_RS03320;Dbxref=Genbank:WP_012174073.1;Name=WP_012174073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968496.1;locus_tag=DOLE_RS03320;product=ATP-binding protein;protein_id=WP_012174073.1;transl_table=11 NC_009943.1 RefSeq gene 765141 770075 . + . ID=gene-DOLE_RS03325;Name=DOLE_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03325;old_locus_tag=Dole_0645 NC_009943.1 Protein Homology CDS 765141 770075 . + 0 ID=cds-WP_012174074.1;Parent=gene-DOLE_RS03325;Dbxref=Genbank:WP_012174074.1;Name=WP_012174074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=DOLE_RS03325;product=DUF2791 family P-loop domain-containing protein;protein_id=WP_012174074.1;transl_table=11 NC_009943.1 RefSeq gene 770132 770458 . + . ID=gene-DOLE_RS03330;Name=DOLE_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03330;old_locus_tag=Dole_0646 NC_009943.1 GeneMarkS-2+ CDS 770132 770458 . + 0 ID=cds-WP_012174075.1;Parent=gene-DOLE_RS03330;Dbxref=Genbank:WP_012174075.1;Name=WP_012174075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03330;product=hypothetical protein;protein_id=WP_012174075.1;transl_table=11 NC_009943.1 RefSeq gene 770465 772162 . + . ID=gene-DOLE_RS03335;Name=DOLE_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03335;old_locus_tag=Dole_0647 NC_009943.1 Protein Homology CDS 770465 772162 . + 0 ID=cds-WP_012174076.1;Parent=gene-DOLE_RS03335;Dbxref=Genbank:WP_012174076.1;Name=WP_012174076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877776.1;locus_tag=DOLE_RS03335;product=AarF/ABC1/UbiB kinase family protein;protein_id=WP_012174076.1;transl_table=11 NC_009943.1 RefSeq gene 772274 773551 . + . ID=gene-DOLE_RS03340;Name=DOLE_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03340;old_locus_tag=Dole_0648 NC_009943.1 Protein Homology CDS 772274 773551 . + 0 ID=cds-WP_012174077.1;Parent=gene-DOLE_RS03340;Dbxref=Genbank:WP_012174077.1;Name=WP_012174077.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=DOLE_RS03340;product=methyl-accepting chemotaxis protein;protein_id=WP_012174077.1;transl_table=11 NC_009943.1 RefSeq gene 773895 774821 . + . ID=gene-DOLE_RS03345;Name=DOLE_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03345;old_locus_tag=Dole_0649 NC_009943.1 Protein Homology CDS 773895 774821 . + 0 ID=cds-WP_012174078.1;Parent=gene-DOLE_RS03345;Dbxref=Genbank:WP_012174078.1;Name=WP_012174078.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012515.2;locus_tag=DOLE_RS03345;product=carbohydrate kinase;protein_id=WP_012174078.1;transl_table=11 NC_009943.1 RefSeq gene 774818 777025 . + . ID=gene-DOLE_RS03350;Name=DOLE_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03350;old_locus_tag=Dole_0650 NC_009943.1 Protein Homology CDS 774818 777025 . + 0 ID=cds-WP_012174079.1;Parent=gene-DOLE_RS03350;Dbxref=Genbank:WP_012174079.1;Name=WP_012174079.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588701.1;locus_tag=DOLE_RS03350;product=HAD-IIB family hydrolase;protein_id=WP_012174079.1;transl_table=11 NC_009943.1 RefSeq gene 777022 778470 . + . ID=gene-DOLE_RS03355;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=DOLE_RS03355;old_locus_tag=Dole_0651 NC_009943.1 Protein Homology CDS 777022 778470 . + 0 ID=cds-WP_012174080.1;Parent=gene-DOLE_RS03355;Dbxref=Genbank:WP_012174080.1;Name=WP_012174080.1;Ontology_term=GO:0005975,GO:0004645;gbkey=CDS;gene=gtfA;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588702.1;locus_tag=DOLE_RS03355;product=sucrose phosphorylase;protein_id=WP_012174080.1;transl_table=11 NC_009943.1 RefSeq gene 778600 778779 . + . ID=gene-DOLE_RS03360;Name=DOLE_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03360;old_locus_tag=Dole_0652 NC_009943.1 Protein Homology CDS 778600 778779 . + 0 ID=cds-WP_012174081.1;Parent=gene-DOLE_RS03360;Dbxref=Genbank:WP_012174081.1;Name=WP_012174081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877295.1;locus_tag=DOLE_RS03360;product=hypothetical protein;protein_id=WP_012174081.1;transl_table=11 NC_009943.1 RefSeq gene 778789 780699 . + . ID=gene-DOLE_RS03365;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=DOLE_RS03365;old_locus_tag=Dole_0653 NC_009943.1 Protein Homology CDS 778789 780699 . + 0 ID=cds-WP_012174082.1;Parent=gene-DOLE_RS03365;Dbxref=Genbank:WP_012174082.1;Name=WP_012174082.1;Ontology_term=GO:0001514,GO:0006414,GO:0003746;gbkey=CDS;gene=selB;go_function=translation elongation factor activity|0003746||IEA;go_process=selenocysteine incorporation|0001514||IEA,translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589947.1;locus_tag=DOLE_RS03365;product=selenocysteine-specific translation elongation factor;protein_id=WP_012174082.1;transl_table=11 NC_009943.1 RefSeq gene 780932 782062 . + . ID=gene-DOLE_RS03370;Name=DOLE_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03370;old_locus_tag=Dole_0654 NC_009943.1 Protein Homology CDS 780932 782062 . + 0 ID=cds-WP_012174083.1;Parent=gene-DOLE_RS03370;Dbxref=Genbank:WP_012174083.1;Name=WP_012174083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074369.1;locus_tag=DOLE_RS03370;product=DUF2333 family protein;protein_id=WP_012174083.1;transl_table=11 NC_009943.1 RefSeq gene 782177 782773 . + . ID=gene-DOLE_RS03375;Name=DOLE_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03375;old_locus_tag=Dole_0655 NC_009943.1 Protein Homology CDS 782177 782773 . + 0 ID=cds-WP_012174084.1;Parent=gene-DOLE_RS03375;Dbxref=Genbank:WP_012174084.1;Name=WP_012174084.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027363.2;locus_tag=DOLE_RS03375;product=chalcone isomerase family protein;protein_id=WP_012174084.1;transl_table=11 NC_009943.1 RefSeq gene 783121 783549 . - . ID=gene-DOLE_RS03385;Name=DOLE_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03385;old_locus_tag=Dole_0656 NC_009943.1 Protein Homology CDS 783121 783549 . - 0 ID=cds-WP_012174085.1;Parent=gene-DOLE_RS03385;Dbxref=Genbank:WP_012174085.1;Name=WP_012174085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013162478.1;locus_tag=DOLE_RS03385;product=peptidylprolyl isomerase;protein_id=WP_012174085.1;transl_table=11 NC_009943.1 RefSeq gene 783838 784131 . + . ID=gene-DOLE_RS03395;Name=DOLE_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03395;old_locus_tag=Dole_0658 NC_009943.1 Protein Homology CDS 783838 784131 . + 0 ID=cds-WP_012174087.1;Parent=gene-DOLE_RS03395;Dbxref=Genbank:WP_012174087.1;Name=WP_012174087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074957.1;locus_tag=DOLE_RS03395;product=BrnT family toxin;protein_id=WP_012174087.1;transl_table=11 NC_009943.1 RefSeq gene 784128 784346 . + . ID=gene-DOLE_RS03400;Name=DOLE_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03400;old_locus_tag=Dole_0659 NC_009943.1 Protein Homology CDS 784128 784346 . + 0 ID=cds-WP_012174088.1;Parent=gene-DOLE_RS03400;Dbxref=Genbank:WP_012174088.1;Name=WP_012174088.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023857.2;locus_tag=DOLE_RS03400;product=BrnA antitoxin family protein;protein_id=WP_012174088.1;transl_table=11 NC_009943.1 RefSeq gene 784747 786099 . - . ID=gene-DOLE_RS03405;Name=DOLE_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03405;old_locus_tag=Dole_0660 NC_009943.1 Protein Homology CDS 784747 786099 . - 0 ID=cds-WP_012174089.1;Parent=gene-DOLE_RS03405;Dbxref=Genbank:WP_012174089.1;Name=WP_012174089.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174089.1;locus_tag=DOLE_RS03405;product=ISNCY-like element ISDol1 family transposase;protein_id=WP_012174089.1;transl_table=11 NC_009943.1 RefSeq gene 786210 786701 . - . ID=gene-DOLE_RS03410;Name=DOLE_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03410;old_locus_tag=Dole_0661 NC_009943.1 GeneMarkS-2+ CDS 786210 786701 . - 0 ID=cds-WP_012174090.1;Parent=gene-DOLE_RS03410;Dbxref=Genbank:WP_012174090.1;Name=WP_012174090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03410;product=hypothetical protein;protein_id=WP_012174090.1;transl_table=11 NC_009943.1 RefSeq gene 786689 787120 . - . ID=gene-DOLE_RS03415;Name=DOLE_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03415;old_locus_tag=Dole_0662 NC_009943.1 GeneMarkS-2+ CDS 786689 787120 . - 0 ID=cds-WP_153304345.1;Parent=gene-DOLE_RS03415;Dbxref=Genbank:WP_153304345.1;Name=WP_153304345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03415;product=hypothetical protein;protein_id=WP_153304345.1;transl_table=11 NC_009943.1 RefSeq gene 787789 788478 . - . ID=gene-DOLE_RS03425;Name=DOLE_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03425;old_locus_tag=Dole_0663 NC_009943.1 Protein Homology CDS 787789 788478 . - 0 ID=cds-WP_012174092.1;Parent=gene-DOLE_RS03425;Dbxref=Genbank:WP_012174092.1;Name=WP_012174092.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=DOLE_RS03425;product=LysE family transporter;protein_id=WP_012174092.1;transl_table=11 NC_009943.1 RefSeq gene 788630 789172 . - . ID=gene-DOLE_RS03430;Name=DOLE_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03430;old_locus_tag=Dole_0664 NC_009943.1 Protein Homology CDS 788630 789172 . - 0 ID=cds-WP_012174093.1;Parent=gene-DOLE_RS03430;Dbxref=Genbank:WP_012174093.1;Name=WP_012174093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947663.1;locus_tag=DOLE_RS03430;product=nitroreductase family protein;protein_id=WP_012174093.1;transl_table=11 NC_009943.1 RefSeq gene 789220 789930 . - . ID=gene-DOLE_RS03435;Name=DOLE_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03435;old_locus_tag=Dole_0665 NC_009943.1 Protein Homology CDS 789220 789930 . - 0 ID=cds-WP_012174094.1;Parent=gene-DOLE_RS03435;Dbxref=Genbank:WP_012174094.1;Name=WP_012174094.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948513.1;locus_tag=DOLE_RS03435;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012174094.1;transl_table=11 NC_009943.1 RefSeq gene 790118 790318 . - . ID=gene-DOLE_RS18540;Name=DOLE_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18540;old_locus_tag=Dole_0666 NC_009943.1 GeneMarkS-2+ CDS 790118 790318 . - 0 ID=cds-WP_012174095.1;Parent=gene-DOLE_RS18540;Dbxref=Genbank:WP_012174095.1;Name=WP_012174095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18540;product=hypothetical protein;protein_id=WP_012174095.1;transl_table=11 NC_009943.1 RefSeq gene 790610 791137 . - . ID=gene-DOLE_RS03445;Name=DOLE_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03445;old_locus_tag=Dole_0668 NC_009943.1 Protein Homology CDS 790610 791137 . - 0 ID=cds-WP_208596990.1;Parent=gene-DOLE_RS03445;Dbxref=Genbank:WP_208596990.1;Name=WP_208596990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876985.1;locus_tag=DOLE_RS03445;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_208596990.1;transl_table=11 NC_009943.1 RefSeq gene 791331 791522 . + . ID=gene-DOLE_RS18490;Name=DOLE_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18490 NC_009943.1 GeneMarkS-2+ CDS 791331 791522 . + 0 ID=cds-WP_208596991.1;Parent=gene-DOLE_RS18490;Dbxref=Genbank:WP_208596991.1;Name=WP_208596991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18490;product=hypothetical protein;protein_id=WP_208596991.1;transl_table=11 NC_009943.1 RefSeq gene 791783 793054 . + . ID=gene-DOLE_RS03450;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=DOLE_RS03450;old_locus_tag=Dole_0669 NC_009943.1 Protein Homology CDS 791783 793054 . + 0 ID=cds-WP_012174098.1;Parent=gene-DOLE_RS03450;Dbxref=Genbank:WP_012174098.1;Name=WP_012174098.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174098.1;locus_tag=DOLE_RS03450;product=histidine--tRNA ligase;protein_id=WP_012174098.1;transl_table=11 NC_009943.1 RefSeq gene 793060 794853 . + . ID=gene-DOLE_RS03455;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=DOLE_RS03455;old_locus_tag=Dole_0670 NC_009943.1 Protein Homology CDS 793060 794853 . + 0 ID=cds-WP_012174099.1;Parent=gene-DOLE_RS03455;Dbxref=Genbank:WP_012174099.1;Name=WP_012174099.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174099.1;locus_tag=DOLE_RS03455;product=aspartate--tRNA ligase;protein_id=WP_012174099.1;transl_table=11 NC_009943.1 RefSeq gene 794857 796146 . + . ID=gene-DOLE_RS03460;Name=DOLE_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03460;old_locus_tag=Dole_0671 NC_009943.1 Protein Homology CDS 794857 796146 . + 0 ID=cds-WP_012174100.1;Parent=gene-DOLE_RS03460;Dbxref=Genbank:WP_012174100.1;Name=WP_012174100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723453.1;locus_tag=DOLE_RS03460;product=acetyl-CoA C-acyltransferase;protein_id=WP_012174100.1;transl_table=11 NC_009943.1 RefSeq gene 796186 796341 . + . ID=gene-DOLE_RS18385;Name=DOLE_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18385;old_locus_tag=Dole_0672 NC_009943.1 Protein Homology CDS 796186 796341 . + 0 ID=cds-WP_012174101.1;Parent=gene-DOLE_RS18385;Dbxref=Genbank:WP_012174101.1;Name=WP_012174101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877633.1;locus_tag=DOLE_RS18385;product=hypothetical protein;protein_id=WP_012174101.1;transl_table=11 NC_009943.1 RefSeq gene 796420 798912 . + . ID=gene-DOLE_RS03465;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=DOLE_RS03465;old_locus_tag=Dole_0673 NC_009943.1 Protein Homology CDS 796420 798912 . + 0 ID=cds-WP_012174102.1;Parent=gene-DOLE_RS03465;Dbxref=Genbank:WP_012174102.1;Name=WP_012174102.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877634.1;locus_tag=DOLE_RS03465;product=DNA gyrase subunit A;protein_id=WP_012174102.1;transl_table=11 NC_009943.1 RefSeq gene 798905 799945 . + . ID=gene-DOLE_RS03470;Name=DOLE_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03470;old_locus_tag=Dole_0674 NC_009943.1 Protein Homology CDS 798905 799945 . + 0 ID=cds-WP_012174103.1;Parent=gene-DOLE_RS03470;Dbxref=Genbank:WP_012174103.1;Name=WP_012174103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903099.1;locus_tag=DOLE_RS03470;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_012174103.1;transl_table=11 NC_009943.1 RefSeq gene 799990 800751 . + . ID=gene-DOLE_RS03475;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=DOLE_RS03475;old_locus_tag=Dole_0675 NC_009943.1 Protein Homology CDS 799990 800751 . + 0 ID=cds-WP_012174104.1;Parent=gene-DOLE_RS03475;Dbxref=Genbank:WP_012174104.1;Name=WP_012174104.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877636.1;locus_tag=DOLE_RS03475;product=DNA repair protein RadC;protein_id=WP_012174104.1;transl_table=11 NC_009943.1 RefSeq gene 800735 801004 . + . ID=gene-DOLE_RS03480;Name=DOLE_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03480;old_locus_tag=Dole_0676 NC_009943.1 Protein Homology CDS 800735 801004 . + 0 ID=cds-WP_012174105.1;Parent=gene-DOLE_RS03480;Dbxref=Genbank:WP_012174105.1;Name=WP_012174105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609762.1;locus_tag=DOLE_RS03480;product=hypothetical protein;protein_id=WP_012174105.1;transl_table=11 NC_009943.1 RefSeq gene 801226 802416 . + . ID=gene-DOLE_RS03485;Name=DOLE_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03485;old_locus_tag=Dole_0677 NC_009943.1 Protein Homology CDS 801226 802416 . + 0 ID=cds-WP_012174106.1;Parent=gene-DOLE_RS03485;Dbxref=Genbank:WP_012174106.1;Name=WP_012174106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174106.1;locus_tag=DOLE_RS03485;product=phosphoglycerate kinase;protein_id=WP_012174106.1;transl_table=11 NC_009943.1 RefSeq gene 802550 803632 . + . ID=gene-DOLE_RS03490;Name=DOLE_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03490;old_locus_tag=Dole_0678 NC_009943.1 Protein Homology CDS 802550 803632 . + 0 ID=cds-WP_012174107.1;Parent=gene-DOLE_RS03490;Dbxref=Genbank:WP_012174107.1;Name=WP_012174107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877639.1;locus_tag=DOLE_RS03490;product=hypothetical protein;protein_id=WP_012174107.1;transl_table=11 NC_009943.1 RefSeq gene 803678 804976 . + . ID=gene-DOLE_RS03495;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=DOLE_RS03495;old_locus_tag=Dole_0679 NC_009943.1 Protein Homology CDS 803678 804976 . + 0 ID=cds-WP_012174108.1;Parent=gene-DOLE_RS03495;Dbxref=Genbank:WP_012174108.1;Name=WP_012174108.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011189789.1;locus_tag=DOLE_RS03495;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_012174108.1;transl_table=11 NC_009943.1 RefSeq gene 804973 806130 . + . ID=gene-DOLE_RS03500;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=DOLE_RS03500;old_locus_tag=Dole_0680 NC_009943.1 Protein Homology CDS 804973 806130 . + 0 ID=cds-WP_012174109.1;Parent=gene-DOLE_RS03500;Dbxref=Genbank:WP_012174109.1;Name=WP_012174109.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174109.1;locus_tag=DOLE_RS03500;product=8-amino-7-oxononanoate synthase;protein_id=WP_012174109.1;transl_table=11 NC_009943.1 RefSeq gene 806127 806759 . + . ID=gene-DOLE_RS03505;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=DOLE_RS03505;old_locus_tag=Dole_0681 NC_009943.1 Protein Homology CDS 806127 806759 . + 0 ID=cds-WP_012174110.1;Parent=gene-DOLE_RS03505;Dbxref=Genbank:WP_012174110.1;Name=WP_012174110.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: protein motif:HMM:NF024891.2;locus_tag=DOLE_RS03505;product=dethiobiotin synthase;protein_id=WP_012174110.1;transl_table=11 NC_009943.1 RefSeq gene 806753 807757 . + . ID=gene-DOLE_RS03510;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=DOLE_RS03510;old_locus_tag=Dole_0682 NC_009943.1 Protein Homology CDS 806753 807757 . + 0 ID=cds-WP_012174111.1;Parent=gene-DOLE_RS03510;Dbxref=Genbank:WP_012174111.1;Name=WP_012174111.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: protein motif:HMM:TIGR00433.2;locus_tag=DOLE_RS03510;product=biotin synthase BioB;protein_id=WP_012174111.1;transl_table=11 NC_009943.1 RefSeq gene 808169 809404 . + . ID=gene-DOLE_RS03515;Name=DOLE_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03515;old_locus_tag=Dole_0683 NC_009943.1 Protein Homology CDS 808169 809404 . + 0 ID=cds-WP_012174112.1;Parent=gene-DOLE_RS03515;Dbxref=Genbank:WP_012174112.1;Name=WP_012174112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662640.1;locus_tag=DOLE_RS03515;product=molybdopterin molybdotransferase MoeA;protein_id=WP_012174112.1;transl_table=11 NC_009943.1 RefSeq gene 809496 811442 . + . ID=gene-DOLE_RS03520;Name=DOLE_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03520;old_locus_tag=Dole_0684 NC_009943.1 Protein Homology CDS 809496 811442 . + 0 ID=cds-WP_012174113.1;Parent=gene-DOLE_RS03520;Dbxref=Genbank:WP_012174113.1;Name=WP_012174113.1;Ontology_term=GO:0032324;gbkey=CDS;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875293.1;locus_tag=DOLE_RS03520;product=molybdopterin biosynthesis protein;protein_id=WP_012174113.1;transl_table=11 NC_009943.1 RefSeq gene 813100 814128 . + . ID=gene-DOLE_RS03525;Name=DOLE_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03525;old_locus_tag=Dole_0687 NC_009943.1 Protein Homology CDS 813100 814128 . + 0 ID=cds-WP_012174116.1;Parent=gene-DOLE_RS03525;Dbxref=Genbank:WP_012174116.1;Name=WP_012174116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173672.1;locus_tag=DOLE_RS03525;product=virulence RhuM family protein;protein_id=WP_012174116.1;transl_table=11 NC_009943.1 RefSeq gene 814168 814620 . + . ID=gene-DOLE_RS03530;Name=DOLE_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03530;old_locus_tag=Dole_0688 NC_009943.1 Protein Homology CDS 814168 814620 . + 0 ID=cds-WP_012174117.1;Parent=gene-DOLE_RS03530;Dbxref=Genbank:WP_012174117.1;Name=WP_012174117.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014058.2;locus_tag=DOLE_RS03530;product=archease;protein_id=WP_012174117.1;transl_table=11 NC_009943.1 RefSeq gene 814828 817458 . + . ID=gene-DOLE_RS03535;Name=DOLE_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03535;old_locus_tag=Dole_0689 NC_009943.1 GeneMarkS-2+ CDS 814828 817458 . + 0 ID=cds-WP_153304346.1;Parent=gene-DOLE_RS03535;Dbxref=Genbank:WP_153304346.1;Name=WP_153304346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03535;product=hypothetical protein;protein_id=WP_153304346.1;transl_table=11 NC_009943.1 RefSeq gene 817498 818874 . + . ID=gene-DOLE_RS03540;Name=DOLE_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03540;old_locus_tag=Dole_0690 NC_009943.1 Protein Homology CDS 817498 818874 . + 0 ID=cds-WP_012174119.1;Parent=gene-DOLE_RS03540;Dbxref=Genbank:WP_012174119.1;Name=WP_012174119.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016800.2;locus_tag=DOLE_RS03540;product=O-antigen ligase family protein;protein_id=WP_012174119.1;transl_table=11 NC_009943.1 RefSeq gene 819010 819264 . - . ID=gene-DOLE_RS03545;Name=DOLE_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03545;old_locus_tag=Dole_0691 NC_009943.1 Protein Homology CDS 819010 819264 . - 0 ID=cds-WP_012174120.1;Parent=gene-DOLE_RS03545;Dbxref=Genbank:WP_012174120.1;Name=WP_012174120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903389.1;locus_tag=DOLE_RS03545;product=DUF2007 domain-containing protein;protein_id=WP_012174120.1;transl_table=11 NC_009943.1 RefSeq gene 819326 820051 . - . ID=gene-DOLE_RS03550;Name=DOLE_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03550;old_locus_tag=Dole_0692 NC_009943.1 Protein Homology CDS 819326 820051 . - 0 ID=cds-WP_012174121.1;Parent=gene-DOLE_RS03550;Dbxref=Genbank:WP_012174121.1;Name=WP_012174121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610613.1;locus_tag=DOLE_RS03550;product=4-vinyl reductase;protein_id=WP_012174121.1;transl_table=11 NC_009943.1 RefSeq gene 820073 821689 . - . ID=gene-DOLE_RS03555;Name=DOLE_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03555;old_locus_tag=Dole_0693 NC_009943.1 Protein Homology CDS 820073 821689 . - 0 ID=cds-WP_012174122.1;Parent=gene-DOLE_RS03555;Dbxref=Genbank:WP_012174122.1;Name=WP_012174122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948201.1;locus_tag=DOLE_RS03555;product=fumarate hydratase;protein_id=WP_012174122.1;transl_table=11 NC_009943.1 RefSeq gene 821988 823775 . - . ID=gene-DOLE_RS03560;Name=DOLE_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03560;old_locus_tag=Dole_0694 NC_009943.1 Protein Homology CDS 821988 823775 . - 0 ID=cds-WP_012174123.1;Parent=gene-DOLE_RS03560;Dbxref=Genbank:WP_012174123.1;Name=WP_012174123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963770.1;locus_tag=DOLE_RS03560;product=lytic transglycosylase domain-containing protein;protein_id=WP_012174123.1;transl_table=11 NC_009943.1 RefSeq gene 824076 824151 . + . ID=gene-DOLE_RS03565;Name=DOLE_RS03565;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS03565;old_locus_tag=Dole_R0017 NC_009943.1 tRNAscan-SE tRNA 824076 824151 . + . ID=rna-DOLE_RS03565;Parent=gene-DOLE_RS03565;anticodon=(pos:824109..824111);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03565;product=tRNA-Thr NC_009943.1 tRNAscan-SE exon 824076 824151 . + . ID=exon-DOLE_RS03565-1;Parent=rna-DOLE_RS03565;anticodon=(pos:824109..824111);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03565;product=tRNA-Thr NC_009943.1 RefSeq gene 824166 824251 . + . ID=gene-DOLE_RS03570;Name=DOLE_RS03570;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS03570;old_locus_tag=Dole_R0018 NC_009943.1 tRNAscan-SE tRNA 824166 824251 . + . ID=rna-DOLE_RS03570;Parent=gene-DOLE_RS03570;anticodon=(pos:824200..824202);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03570;product=tRNA-Tyr NC_009943.1 tRNAscan-SE exon 824166 824251 . + . ID=exon-DOLE_RS03570-1;Parent=rna-DOLE_RS03570;anticodon=(pos:824200..824202);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03570;product=tRNA-Tyr NC_009943.1 RefSeq gene 824255 824330 . + . ID=gene-DOLE_RS03575;Name=DOLE_RS03575;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS03575;old_locus_tag=Dole_R0019 NC_009943.1 tRNAscan-SE tRNA 824255 824330 . + . ID=rna-DOLE_RS03575;Parent=gene-DOLE_RS03575;anticodon=(pos:824288..824290);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03575;product=tRNA-Gly NC_009943.1 tRNAscan-SE exon 824255 824330 . + . ID=exon-DOLE_RS03575-1;Parent=rna-DOLE_RS03575;anticodon=(pos:824288..824290);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03575;product=tRNA-Gly NC_009943.1 RefSeq gene 824352 824429 . + . ID=gene-DOLE_RS03580;Name=DOLE_RS03580;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS03580;old_locus_tag=Dole_R0020 NC_009943.1 tRNAscan-SE tRNA 824352 824429 . + . ID=rna-DOLE_RS03580;Parent=gene-DOLE_RS03580;anticodon=(pos:824385..824387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03580;product=tRNA-Thr NC_009943.1 tRNAscan-SE exon 824352 824429 . + . ID=exon-DOLE_RS03580-1;Parent=rna-DOLE_RS03580;anticodon=(pos:824385..824387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03580;product=tRNA-Thr NC_009943.1 RefSeq gene 824525 825718 . + . ID=gene-DOLE_RS03585;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=DOLE_RS03585;old_locus_tag=Dole_0695 NC_009943.1 Protein Homology CDS 824525 825718 . + 0 ID=cds-WP_012174124.1;Parent=gene-DOLE_RS03585;Dbxref=Genbank:WP_012174124.1;Name=WP_012174124.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011188365.1;locus_tag=DOLE_RS03585;product=elongation factor Tu;protein_id=WP_012174124.1;transl_table=11 NC_009943.1 RefSeq gene 825744 825893 . + . ID=gene-DOLE_RS17855;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=DOLE_RS17855 NC_009943.1 Protein Homology CDS 825744 825893 . + 0 ID=cds-WP_083766514.1;Parent=gene-DOLE_RS17855;Dbxref=Genbank:WP_083766514.1;Name=WP_083766514.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=DOLE_RS17855;product=50S ribosomal protein L33;protein_id=WP_083766514.1;transl_table=11 NC_009943.1 RefSeq gene 825942 826017 . + . ID=gene-DOLE_RS03590;Name=DOLE_RS03590;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS03590;old_locus_tag=Dole_R0021 NC_009943.1 tRNAscan-SE tRNA 825942 826017 . + . ID=rna-DOLE_RS03590;Parent=gene-DOLE_RS03590;anticodon=(pos:825975..825977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03590;product=tRNA-Trp NC_009943.1 tRNAscan-SE exon 825942 826017 . + . ID=exon-DOLE_RS03590-1;Parent=rna-DOLE_RS03590;anticodon=(pos:825975..825977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS03590;product=tRNA-Trp NC_009943.1 RefSeq gene 826097 826489 . + . ID=gene-DOLE_RS18545;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=DOLE_RS18545;old_locus_tag=Dole_0696 NC_009943.1 Protein Homology CDS 826097 826489 . + 0 ID=cds-WP_012174125.1;Parent=gene-DOLE_RS18545;Dbxref=Genbank:WP_012174125.1;Name=WP_012174125.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: protein motif:HMM:TIGR00964.1;locus_tag=DOLE_RS18545;product=preprotein translocase subunit SecE;protein_id=WP_012174125.1;transl_table=11 NC_009943.1 RefSeq gene 826507 827037 . + . ID=gene-DOLE_RS03600;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=DOLE_RS03600;old_locus_tag=Dole_0697 NC_009943.1 Protein Homology CDS 826507 827037 . + 0 ID=cds-WP_012174126.1;Parent=gene-DOLE_RS03600;Dbxref=Genbank:WP_012174126.1;Name=WP_012174126.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589519.1;locus_tag=DOLE_RS03600;product=transcription termination/antitermination protein NusG;protein_id=WP_012174126.1;transl_table=11 NC_009943.1 RefSeq gene 827055 827480 . + . ID=gene-DOLE_RS03605;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=DOLE_RS03605;old_locus_tag=Dole_0698 NC_009943.1 Protein Homology CDS 827055 827480 . + 0 ID=cds-WP_012174127.1;Parent=gene-DOLE_RS03605;Dbxref=Genbank:WP_012174127.1;Name=WP_012174127.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1;locus_tag=DOLE_RS03605;product=50S ribosomal protein L11;protein_id=WP_012174127.1;transl_table=11 NC_009943.1 RefSeq gene 827493 828197 . + . ID=gene-DOLE_RS03610;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=DOLE_RS03610;old_locus_tag=Dole_0699 NC_009943.1 Protein Homology CDS 827493 828197 . + 0 ID=cds-WP_012174128.1;Parent=gene-DOLE_RS03610;Dbxref=Genbank:WP_012174128.1;Name=WP_012174128.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174128.1;locus_tag=DOLE_RS03610;product=50S ribosomal protein L1;protein_id=WP_012174128.1;transl_table=11 NC_009943.1 RefSeq gene 828429 828953 . + . ID=gene-DOLE_RS03615;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=DOLE_RS03615;old_locus_tag=Dole_0700 NC_009943.1 Protein Homology CDS 828429 828953 . + 0 ID=cds-WP_012174129.1;Parent=gene-DOLE_RS03615;Dbxref=Genbank:WP_012174129.1;Name=WP_012174129.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958836.1;locus_tag=DOLE_RS03615;product=50S ribosomal protein L10;protein_id=WP_012174129.1;transl_table=11 NC_009943.1 RefSeq gene 829014 829400 . + . ID=gene-DOLE_RS03620;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=DOLE_RS03620;old_locus_tag=Dole_0701 NC_009943.1 Protein Homology CDS 829014 829400 . + 0 ID=cds-WP_012174130.1;Parent=gene-DOLE_RS03620;Dbxref=Genbank:WP_012174130.1;Name=WP_012174130.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878814.1;locus_tag=DOLE_RS03620;product=50S ribosomal protein L7/L12;protein_id=WP_012174130.1;transl_table=11 NC_009943.1 RefSeq gene 829582 833688 . + . ID=gene-DOLE_RS03625;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=DOLE_RS03625;old_locus_tag=Dole_0702 NC_009943.1 Protein Homology CDS 829582 833688 . + 0 ID=cds-WP_012174131.1;Parent=gene-DOLE_RS03625;Dbxref=Genbank:WP_012174131.1;Name=WP_012174131.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174131.1;locus_tag=DOLE_RS03625;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_012174131.1;transl_table=11 NC_009943.1 RefSeq gene 833692 838035 . + . ID=gene-DOLE_RS03630;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=DOLE_RS03630;old_locus_tag=Dole_0703 NC_009943.1 Protein Homology CDS 833692 838035 . + 0 ID=cds-WP_012174132.1;Parent=gene-DOLE_RS03630;Dbxref=Genbank:WP_012174132.1;Name=WP_012174132.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174132.1;locus_tag=DOLE_RS03630;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_012174132.1;transl_table=11 NC_009943.1 RefSeq gene 838176 838547 . + . ID=gene-DOLE_RS03635;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=DOLE_RS03635;old_locus_tag=Dole_0704 NC_009943.1 Protein Homology CDS 838176 838547 . + 0 ID=cds-WP_012174133.1;Parent=gene-DOLE_RS03635;Dbxref=Genbank:WP_012174133.1;Name=WP_012174133.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010938593.1;locus_tag=DOLE_RS03635;product=30S ribosomal protein S12;protein_id=WP_012174133.1;transl_table=11 NC_009943.1 RefSeq gene 838608 839078 . + . ID=gene-DOLE_RS03640;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=DOLE_RS03640;old_locus_tag=Dole_0705 NC_009943.1 Protein Homology CDS 838608 839078 . + 0 ID=cds-WP_012174134.1;Parent=gene-DOLE_RS03640;Dbxref=Genbank:WP_012174134.1;Name=WP_012174134.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=DOLE_RS03640;product=30S ribosomal protein S7;protein_id=WP_012174134.1;transl_table=11 NC_009943.1 RefSeq gene 839167 840360 . + . ID=gene-DOLE_RS03645;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=DOLE_RS03645;old_locus_tag=Dole_0706 NC_009943.1 Protein Homology CDS 839167 840360 . + 0 ID=cds-WP_012174124.1-2;Parent=gene-DOLE_RS03645;Dbxref=Genbank:WP_012174124.1;Name=WP_012174124.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011188365.1;locus_tag=DOLE_RS03645;product=elongation factor Tu;protein_id=WP_012174124.1;transl_table=11 NC_009943.1 RefSeq gene 840404 840709 . + . ID=gene-DOLE_RS03650;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=DOLE_RS03650;old_locus_tag=Dole_0707 NC_009943.1 Protein Homology CDS 840404 840709 . + 0 ID=cds-WP_012174135.1;Parent=gene-DOLE_RS03650;Dbxref=Genbank:WP_012174135.1;Name=WP_012174135.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163676.1;locus_tag=DOLE_RS03650;product=30S ribosomal protein S10;protein_id=WP_012174135.1;transl_table=11 NC_009943.1 RefSeq gene 840738 841364 . + . ID=gene-DOLE_RS03655;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=DOLE_RS03655;old_locus_tag=Dole_0708 NC_009943.1 Protein Homology CDS 840738 841364 . + 0 ID=cds-WP_012174136.1;Parent=gene-DOLE_RS03655;Dbxref=Genbank:WP_012174136.1;Name=WP_012174136.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174136.1;locus_tag=DOLE_RS03655;product=50S ribosomal protein L3;protein_id=WP_012174136.1;transl_table=11 NC_009943.1 RefSeq gene 841414 842031 . + . ID=gene-DOLE_RS03660;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=DOLE_RS03660;old_locus_tag=Dole_0709 NC_009943.1 Protein Homology CDS 841414 842031 . + 0 ID=cds-WP_012174137.1;Parent=gene-DOLE_RS03660;Dbxref=Genbank:WP_012174137.1;Name=WP_012174137.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174137.1;locus_tag=DOLE_RS03660;product=50S ribosomal protein L4;protein_id=WP_012174137.1;transl_table=11 NC_009943.1 RefSeq gene 842031 842318 . + . ID=gene-DOLE_RS03665;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=DOLE_RS03665;old_locus_tag=Dole_0710 NC_009943.1 Protein Homology CDS 842031 842318 . + 0 ID=cds-WP_012174138.1;Parent=gene-DOLE_RS03665;Dbxref=Genbank:WP_012174138.1;Name=WP_012174138.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174138.1;locus_tag=DOLE_RS03665;product=50S ribosomal protein L23;protein_id=WP_012174138.1;transl_table=11 NC_009943.1 RefSeq gene 842331 843158 . + . ID=gene-DOLE_RS03670;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=DOLE_RS03670;old_locus_tag=Dole_0711 NC_009943.1 Protein Homology CDS 842331 843158 . + 0 ID=cds-WP_012174139.1;Parent=gene-DOLE_RS03670;Dbxref=Genbank:WP_012174139.1;Name=WP_012174139.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174139.1;locus_tag=DOLE_RS03670;product=50S ribosomal protein L2;protein_id=WP_012174139.1;transl_table=11 NC_009943.1 RefSeq gene 843205 843483 . + . ID=gene-DOLE_RS03675;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=DOLE_RS03675;old_locus_tag=Dole_0712 NC_009943.1 Protein Homology CDS 843205 843483 . + 0 ID=cds-WP_012174140.1;Parent=gene-DOLE_RS03675;Dbxref=Genbank:WP_012174140.1;Name=WP_012174140.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174140.1;locus_tag=DOLE_RS03675;product=30S ribosomal protein S19;protein_id=WP_012174140.1;transl_table=11 NC_009943.1 RefSeq gene 843540 843884 . + . ID=gene-DOLE_RS03680;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=DOLE_RS03680;old_locus_tag=Dole_0713 NC_009943.1 Protein Homology CDS 843540 843884 . + 0 ID=cds-WP_012174141.1;Parent=gene-DOLE_RS03680;Dbxref=Genbank:WP_012174141.1;Name=WP_012174141.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174141.1;locus_tag=DOLE_RS03680;product=50S ribosomal protein L22;protein_id=WP_012174141.1;transl_table=11 NC_009943.1 RefSeq gene 843900 844550 . + . ID=gene-DOLE_RS03685;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=DOLE_RS03685;old_locus_tag=Dole_0714 NC_009943.1 Protein Homology CDS 843900 844550 . + 0 ID=cds-WP_012174142.1;Parent=gene-DOLE_RS03685;Dbxref=Genbank:WP_012174142.1;Name=WP_012174142.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174142.1;locus_tag=DOLE_RS03685;product=30S ribosomal protein S3;protein_id=WP_012174142.1;transl_table=11 NC_009943.1 RefSeq gene 844575 844988 . + . ID=gene-DOLE_RS03690;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=DOLE_RS03690;old_locus_tag=Dole_0715 NC_009943.1 Protein Homology CDS 844575 844988 . + 0 ID=cds-WP_012174143.1;Parent=gene-DOLE_RS03690;Dbxref=Genbank:WP_012174143.1;Name=WP_012174143.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174143.1;locus_tag=DOLE_RS03690;product=50S ribosomal protein L16;protein_id=WP_012174143.1;transl_table=11 NC_009943.1 RefSeq gene 844988 845176 . + . ID=gene-DOLE_RS03695;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=DOLE_RS03695;old_locus_tag=Dole_0716 NC_009943.1 Protein Homology CDS 844988 845176 . + 0 ID=cds-WP_012174144.1;Parent=gene-DOLE_RS03695;Dbxref=Genbank:WP_012174144.1;Name=WP_012174144.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174144.1;locus_tag=DOLE_RS03695;product=50S ribosomal protein L29;protein_id=WP_012174144.1;transl_table=11 NC_009943.1 RefSeq gene 845210 845467 . + . ID=gene-DOLE_RS03700;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=DOLE_RS03700;old_locus_tag=Dole_0717 NC_009943.1 Protein Homology CDS 845210 845467 . + 0 ID=cds-WP_012174145.1;Parent=gene-DOLE_RS03700;Dbxref=Genbank:WP_012174145.1;Name=WP_012174145.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174145.1;locus_tag=DOLE_RS03700;product=30S ribosomal protein S17;protein_id=WP_012174145.1;transl_table=11 NC_009943.1 RefSeq gene 845489 845857 . + . ID=gene-DOLE_RS03705;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=DOLE_RS03705;old_locus_tag=Dole_0718 NC_009943.1 Protein Homology CDS 845489 845857 . + 0 ID=cds-WP_012174146.1;Parent=gene-DOLE_RS03705;Dbxref=Genbank:WP_012174146.1;Name=WP_012174146.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1;locus_tag=DOLE_RS03705;product=50S ribosomal protein L14;protein_id=WP_012174146.1;transl_table=11 NC_009943.1 RefSeq gene 845887 846213 . + . ID=gene-DOLE_RS03710;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=DOLE_RS03710;old_locus_tag=Dole_0719 NC_009943.1 Protein Homology CDS 845887 846213 . + 0 ID=cds-WP_012174147.1;Parent=gene-DOLE_RS03710;Dbxref=Genbank:WP_012174147.1;Name=WP_012174147.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174147.1;locus_tag=DOLE_RS03710;product=50S ribosomal protein L24;protein_id=WP_012174147.1;transl_table=11 NC_009943.1 RefSeq gene 846243 846782 . + . ID=gene-DOLE_RS03715;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=DOLE_RS03715;old_locus_tag=Dole_0720 NC_009943.1 Protein Homology CDS 846243 846782 . + 0 ID=cds-WP_012174148.1;Parent=gene-DOLE_RS03715;Dbxref=Genbank:WP_012174148.1;Name=WP_012174148.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174148.1;locus_tag=DOLE_RS03715;product=50S ribosomal protein L5;protein_id=WP_012174148.1;transl_table=11 NC_009943.1 RefSeq gene 846843 847028 . + . ID=gene-DOLE_RS17860;Name=DOLE_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17860;old_locus_tag=Dole_0721 NC_009943.1 Protein Homology CDS 846843 847028 . + 0 ID=cds-WP_012174149.1;Parent=gene-DOLE_RS17860;Dbxref=Genbank:WP_012174149.1;Name=WP_012174149.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=DOLE_RS17860;product=type Z 30S ribosomal protein S14;protein_id=WP_012174149.1;transl_table=11 NC_009943.1 RefSeq gene 847102 847500 . + . ID=gene-DOLE_RS03725;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=DOLE_RS03725;old_locus_tag=Dole_0722 NC_009943.1 Protein Homology CDS 847102 847500 . + 0 ID=cds-WP_012174150.1;Parent=gene-DOLE_RS03725;Dbxref=Genbank:WP_012174150.1;Name=WP_012174150.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=DOLE_RS03725;product=30S ribosomal protein S8;protein_id=WP_012174150.1;transl_table=11 NC_009943.1 RefSeq gene 847517 848047 . + . ID=gene-DOLE_RS03730;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=DOLE_RS03730;old_locus_tag=Dole_0723 NC_009943.1 Protein Homology CDS 847517 848047 . + 0 ID=cds-WP_012174151.1;Parent=gene-DOLE_RS03730;Dbxref=Genbank:WP_012174151.1;Name=WP_012174151.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174151.1;locus_tag=DOLE_RS03730;product=50S ribosomal protein L6;protein_id=WP_012174151.1;transl_table=11 NC_009943.1 RefSeq gene 848065 848439 . + . ID=gene-DOLE_RS03735;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=DOLE_RS03735;old_locus_tag=Dole_0724 NC_009943.1 Protein Homology CDS 848065 848439 . + 0 ID=cds-WP_012174152.1;Parent=gene-DOLE_RS03735;Dbxref=Genbank:WP_012174152.1;Name=WP_012174152.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174152.1;locus_tag=DOLE_RS03735;product=50S ribosomal protein L18;protein_id=WP_012174152.1;transl_table=11 NC_009943.1 RefSeq gene 848516 849013 . + . ID=gene-DOLE_RS03740;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=DOLE_RS03740;old_locus_tag=Dole_0725 NC_009943.1 Protein Homology CDS 848516 849013 . + 0 ID=cds-WP_012174153.1;Parent=gene-DOLE_RS03740;Dbxref=Genbank:WP_012174153.1;Name=WP_012174153.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404297.1;locus_tag=DOLE_RS03740;product=30S ribosomal protein S5;protein_id=WP_012174153.1;transl_table=11 NC_009943.1 RefSeq gene 849028 849225 . + . ID=gene-DOLE_RS03745;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=DOLE_RS03745;old_locus_tag=Dole_0726 NC_009943.1 Protein Homology CDS 849028 849225 . + 0 ID=cds-WP_041280334.1;Parent=gene-DOLE_RS03745;Dbxref=Genbank:WP_041280334.1;Name=WP_041280334.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012611025.1;locus_tag=DOLE_RS03745;product=50S ribosomal protein L30;protein_id=WP_041280334.1;transl_table=11 NC_009943.1 RefSeq gene 849212 849655 . + . ID=gene-DOLE_RS03750;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=DOLE_RS03750;old_locus_tag=Dole_0727 NC_009943.1 Protein Homology CDS 849212 849655 . + 0 ID=cds-WP_012174155.1;Parent=gene-DOLE_RS03750;Dbxref=Genbank:WP_012174155.1;Name=WP_012174155.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174155.1;locus_tag=DOLE_RS03750;product=50S ribosomal protein L15;protein_id=WP_012174155.1;transl_table=11 NC_009943.1 RefSeq gene 849655 850944 . + . ID=gene-DOLE_RS03755;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=DOLE_RS03755;old_locus_tag=Dole_0728 NC_009943.1 Protein Homology CDS 849655 850944 . + 0 ID=cds-WP_012174156.1;Parent=gene-DOLE_RS03755;Dbxref=Genbank:WP_012174156.1;Name=WP_012174156.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905421.1;locus_tag=DOLE_RS03755;product=preprotein translocase subunit SecY;protein_id=WP_012174156.1;transl_table=11 NC_009943.1 RefSeq gene 850986 851204 . + . ID=gene-DOLE_RS03760;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=DOLE_RS03760;old_locus_tag=Dole_0729 NC_009943.1 Protein Homology CDS 850986 851204 . + 0 ID=cds-WP_012174157.1;Parent=gene-DOLE_RS03760;Dbxref=Genbank:WP_012174157.1;Name=WP_012174157.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1;locus_tag=DOLE_RS03760;product=translation initiation factor IF-1;protein_id=WP_012174157.1;transl_table=11 NC_009943.1 RefSeq gene 851263 851376 . + . ID=gene-DOLE_RS17865;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=DOLE_RS17865 NC_009943.1 Protein Homology CDS 851263 851376 . + 0 ID=cds-WP_083766515.1;Parent=gene-DOLE_RS17865;Dbxref=Genbank:WP_083766515.1;Name=WP_083766515.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=DOLE_RS17865;product=50S ribosomal protein L36;protein_id=WP_083766515.1;transl_table=11 NC_009943.1 RefSeq gene 851398 851781 . + . ID=gene-DOLE_RS03765;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=DOLE_RS03765;old_locus_tag=Dole_0730 NC_009943.1 Protein Homology CDS 851398 851781 . + 0 ID=cds-WP_012174158.1;Parent=gene-DOLE_RS03765;Dbxref=Genbank:WP_012174158.1;Name=WP_012174158.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174158.1;locus_tag=DOLE_RS03765;product=30S ribosomal protein S13;protein_id=WP_012174158.1;transl_table=11 NC_009943.1 RefSeq gene 851807 852193 . + . ID=gene-DOLE_RS03770;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=DOLE_RS03770;old_locus_tag=Dole_0731 NC_009943.1 Protein Homology CDS 851807 852193 . + 0 ID=cds-WP_012174159.1;Parent=gene-DOLE_RS03770;Dbxref=Genbank:WP_012174159.1;Name=WP_012174159.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1;locus_tag=DOLE_RS03770;product=30S ribosomal protein S11;protein_id=WP_012174159.1;transl_table=11 NC_009943.1 RefSeq gene 852255 852881 . + . ID=gene-DOLE_RS03775;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=DOLE_RS03775;old_locus_tag=Dole_0732 NC_009943.1 Protein Homology CDS 852255 852881 . + 0 ID=cds-WP_012174160.1;Parent=gene-DOLE_RS03775;Dbxref=Genbank:WP_012174160.1;Name=WP_012174160.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174160.1;locus_tag=DOLE_RS03775;product=30S ribosomal protein S4;protein_id=WP_012174160.1;transl_table=11 NC_009943.1 RefSeq gene 852995 854014 . + . ID=gene-DOLE_RS03780;Name=DOLE_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03780;old_locus_tag=Dole_0733 NC_009943.1 Protein Homology CDS 852995 854014 . + 0 ID=cds-WP_012174161.1;Parent=gene-DOLE_RS03780;Dbxref=Genbank:WP_012174161.1;Name=WP_012174161.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174161.1;locus_tag=DOLE_RS03780;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_012174161.1;transl_table=11 NC_009943.1 RefSeq gene 854023 854649 . + . ID=gene-DOLE_RS18660;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=DOLE_RS18660;old_locus_tag=Dole_0734 NC_009943.1 Protein Homology CDS 854023 854649 . + 0 ID=cds-WP_012174162.1;Parent=gene-DOLE_RS18660;Dbxref=Genbank:WP_012174162.1;Name=WP_012174162.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174162.1;locus_tag=DOLE_RS18660;product=50S ribosomal protein L17;protein_id=WP_012174162.1;transl_table=11 NC_009943.1 RefSeq gene 854693 855736 . - . ID=gene-DOLE_RS03790;Name=DOLE_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03790;old_locus_tag=Dole_0735 NC_009943.1 Protein Homology CDS 854693 855736 . - 0 ID=cds-WP_012174163.1;Parent=gene-DOLE_RS03790;Dbxref=Genbank:WP_012174163.1;Name=WP_012174163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS03790;product=sensor domain-containing diguanylate cyclase;protein_id=WP_012174163.1;transl_table=11 NC_009943.1 RefSeq gene 855920 857158 . - . ID=gene-DOLE_RS03795;Name=DOLE_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03795;old_locus_tag=Dole_0736 NC_009943.1 Protein Homology CDS 855920 857158 . - 0 ID=cds-WP_041280335.1;Parent=gene-DOLE_RS03795;Dbxref=Genbank:WP_041280335.1;Name=WP_041280335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024676.2;locus_tag=DOLE_RS03795;product=WYL domain-containing protein;protein_id=WP_041280335.1;transl_table=11 NC_009943.1 RefSeq gene 857189 858049 . - . ID=gene-DOLE_RS03800;Name=DOLE_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03800;old_locus_tag=Dole_0737 NC_009943.1 GeneMarkS-2+ CDS 857189 858049 . - 0 ID=cds-WP_012174165.1;Parent=gene-DOLE_RS03800;Dbxref=Genbank:WP_012174165.1;Name=WP_012174165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03800;product=hypothetical protein;protein_id=WP_012174165.1;transl_table=11 NC_009943.1 RefSeq gene 858102 859997 . - . ID=gene-DOLE_RS03805;Name=DOLE_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03805;old_locus_tag=Dole_0738 NC_009943.1 Protein Homology CDS 858102 859997 . - 0 ID=cds-WP_012174166.1;Parent=gene-DOLE_RS03805;Dbxref=Genbank:WP_012174166.1;Name=WP_012174166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019976.2;locus_tag=DOLE_RS03805;product=NERD domain-containing protein/DEAD/DEAH box helicase;protein_id=WP_012174166.1;transl_table=11 NC_009943.1 RefSeq direct_repeat 860153 861365 . + . ID=id-NC_009943.1:860153..861365;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=860303..860337;rpt_unit_seq=gtcgcaatcccctctaacagcgggtctcttccttc NC_009943.1 RefSeq gene 861664 862914 . - . ID=gene-DOLE_RS03810;Name=DOLE_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03810;old_locus_tag=Dole_0739 NC_009943.1 Protein Homology CDS 861664 862914 . - 0 ID=cds-WP_153304347.1;Parent=gene-DOLE_RS03810;Dbxref=Genbank:WP_153304347.1;Name=WP_153304347.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF021207.2;locus_tag=DOLE_RS03810;product=TIGR02710 family CRISPR-associated CARF protein;protein_id=WP_153304347.1;transl_table=11 NC_009943.1 RefSeq gene 862978 864153 . - . ID=gene-DOLE_RS03815;Name=csm5;gbkey=Gene;gene=csm5;gene_biotype=protein_coding;locus_tag=DOLE_RS03815;old_locus_tag=Dole_0740 NC_009943.1 Protein Homology CDS 862978 864153 . - 0 ID=cds-WP_012174168.1;Parent=gene-DOLE_RS03815;Dbxref=Genbank:WP_012174168.1;Name=WP_012174168.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csm5;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01899.1;locus_tag=DOLE_RS03815;product=type III-A CRISPR-associated RAMP protein Csm5;protein_id=WP_012174168.1;transl_table=11 NC_009943.1 RefSeq gene 864150 865082 . - . ID=gene-DOLE_RS03820;Name=DOLE_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03820;old_locus_tag=Dole_0741 NC_009943.1 GeneMarkS-2+ CDS 864150 865082 . - 0 ID=cds-WP_012174169.1;Parent=gene-DOLE_RS03820;Dbxref=Genbank:WP_012174169.1;Name=WP_012174169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03820;product=hypothetical protein;protein_id=WP_012174169.1;transl_table=11 NC_009943.1 RefSeq gene 865085 865813 . - . ID=gene-DOLE_RS03825;Name=csm3;gbkey=Gene;gene=csm3;gene_biotype=protein_coding;locus_tag=DOLE_RS03825;old_locus_tag=Dole_0742 NC_009943.1 Protein Homology CDS 865085 865813 . - 0 ID=cds-WP_012174170.1;Parent=gene-DOLE_RS03825;Dbxref=Genbank:WP_012174170.1;Name=WP_012174170.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csm3;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073957.1;locus_tag=DOLE_RS03825;product=type III-A CRISPR-associated RAMP protein Csm3;protein_id=WP_012174170.1;transl_table=11 NC_009943.1 RefSeq gene 865834 866328 . - . ID=gene-DOLE_RS03830;Name=csm2;gbkey=Gene;gene=csm2;gene_biotype=protein_coding;locus_tag=DOLE_RS03830;old_locus_tag=Dole_0743 NC_009943.1 Protein Homology CDS 865834 866328 . - 0 ID=cds-WP_012174171.1;Parent=gene-DOLE_RS03830;Dbxref=Genbank:WP_012174171.1;Name=WP_012174171.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csm2;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF015695.2;locus_tag=DOLE_RS03830;product=type III-A CRISPR-associated protein Csm2;protein_id=WP_012174171.1;transl_table=11 NC_009943.1 RefSeq gene 866347 868884 . - . ID=gene-DOLE_RS03835;Name=cas10;gbkey=Gene;gene=cas10;gene_biotype=protein_coding;locus_tag=DOLE_RS03835;old_locus_tag=Dole_0744 NC_009943.1 Protein Homology CDS 866347 868884 . - 0 ID=cds-WP_012174172.1;Parent=gene-DOLE_RS03835;Dbxref=Genbank:WP_012174172.1;Name=WP_012174172.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas10;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR02578.1;locus_tag=DOLE_RS03835;product=type III-A CRISPR-associated protein Cas10/Csm1;protein_id=WP_012174172.1;transl_table=11 NC_009943.1 RefSeq gene 868896 870002 . - . ID=gene-DOLE_RS03840;Name=DOLE_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03840;old_locus_tag=Dole_0745 NC_009943.1 Protein Homology CDS 868896 870002 . - 0 ID=cds-WP_012174173.1;Parent=gene-DOLE_RS03840;Dbxref=Genbank:WP_012174173.1;Name=WP_012174173.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR02619.1;locus_tag=DOLE_RS03840;product=putative CRISPR-associated protein;protein_id=WP_012174173.1;transl_table=11 NC_009943.1 RefSeq gene 870439 871563 . - . ID=gene-DOLE_RS03845;Name=csm6;gbkey=Gene;gene=csm6;gene_biotype=protein_coding;locus_tag=DOLE_RS03845;old_locus_tag=Dole_0746 NC_009943.1 Protein Homology CDS 870439 871563 . - 0 ID=cds-WP_041280790.1;Parent=gene-DOLE_RS03845;Dbxref=Genbank:WP_041280790.1;Name=WP_041280790.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csm6;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF021162.2;locus_tag=DOLE_RS03845;product=CRISPR-associated ring nuclease Csm6;protein_id=WP_041280790.1;transl_table=11 NC_009943.1 RefSeq gene 871644 872561 . - . ID=gene-DOLE_RS03850;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=DOLE_RS03850;old_locus_tag=Dole_0747 NC_009943.1 Protein Homology CDS 871644 872561 . - 0 ID=cds-WP_012174175.1;Parent=gene-DOLE_RS03850;Dbxref=Genbank:WP_012174175.1;Name=WP_012174175.1;gbkey=CDS;gene=cas6;inference=COORDINATES: protein motif:HMM:NF021551.2;locus_tag=DOLE_RS03850;product=CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6;protein_id=WP_012174175.1;transl_table=11 NC_009943.1 RefSeq gene 872721 873512 . - . ID=gene-DOLE_RS03855;Name=DOLE_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03855;old_locus_tag=Dole_0748 NC_009943.1 Protein Homology CDS 872721 873512 . - 0 ID=cds-WP_012174176.1;Parent=gene-DOLE_RS03855;Dbxref=Genbank:WP_012174176.1;Name=WP_012174176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959564.1;locus_tag=DOLE_RS03855;product=4Fe-4S binding protein;protein_id=WP_012174176.1;transl_table=11 NC_009943.1 RefSeq gene 873684 874508 . - . ID=gene-DOLE_RS03860;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=DOLE_RS03860;old_locus_tag=Dole_0749 NC_009943.1 Protein Homology CDS 873684 874508 . - 0 ID=cds-WP_012174177.1;Parent=gene-DOLE_RS03860;Dbxref=Genbank:WP_012174177.1;Name=WP_012174177.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174177.1;locus_tag=DOLE_RS03860;product=hydroxyethylthiazole kinase;protein_id=WP_012174177.1;transl_table=11 NC_009943.1 RefSeq gene 874533 874967 . - . ID=gene-DOLE_RS03865;Name=DOLE_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03865;old_locus_tag=Dole_0750 NC_009943.1 Protein Homology CDS 874533 874967 . - 0 ID=cds-WP_012174178.1;Parent=gene-DOLE_RS03865;Dbxref=Genbank:WP_012174178.1;Name=WP_012174178.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959694.1;locus_tag=DOLE_RS03865;product=MOSC domain-containing protein;protein_id=WP_012174178.1;transl_table=11 NC_009943.1 RefSeq gene 875173 875808 . - . ID=gene-DOLE_RS03870;Name=metW;gbkey=Gene;gene=metW;gene_biotype=protein_coding;locus_tag=DOLE_RS03870;old_locus_tag=Dole_0751 NC_009943.1 Protein Homology CDS 875173 875808 . - 0 ID=cds-WP_012174179.1;Parent=gene-DOLE_RS03870;Dbxref=Genbank:WP_012174179.1;Name=WP_012174179.1;Ontology_term=GO:0009086;gbkey=CDS;gene=metW;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906418.1;locus_tag=DOLE_RS03870;product=methionine biosynthesis protein MetW;protein_id=WP_012174179.1;transl_table=11 NC_009943.1 RefSeq gene 875780 876955 . - . ID=gene-DOLE_RS03875;Name=DOLE_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03875;old_locus_tag=Dole_0752 NC_009943.1 Protein Homology CDS 875780 876955 . - 0 ID=cds-WP_012174180.1;Parent=gene-DOLE_RS03875;Dbxref=Genbank:WP_012174180.1;Name=WP_012174180.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041277703.1;locus_tag=DOLE_RS03875;product=homoserine O-acetyltransferase;protein_id=WP_012174180.1;transl_table=11 NC_009943.1 RefSeq gene 876952 878211 . - . ID=gene-DOLE_RS03880;Name=DOLE_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03880;old_locus_tag=Dole_0753 NC_009943.1 Protein Homology CDS 876952 878211 . - 0 ID=cds-WP_012174181.1;Parent=gene-DOLE_RS03880;Dbxref=Genbank:WP_012174181.1;Name=WP_012174181.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013237.2;locus_tag=DOLE_RS03880;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_012174181.1;transl_table=11 NC_009943.1 RefSeq gene 878213 878629 . - . ID=gene-DOLE_RS03885;Name=DOLE_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03885;old_locus_tag=Dole_0754 NC_009943.1 Protein Homology CDS 878213 878629 . - 0 ID=cds-WP_041280337.1;Parent=gene-DOLE_RS03885;Dbxref=Genbank:WP_041280337.1;Name=WP_041280337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906001.1;locus_tag=DOLE_RS03885;product=transcriptional regulator;protein_id=WP_041280337.1;transl_table=11 NC_009943.1 RefSeq gene 878748 879269 . + . ID=gene-DOLE_RS03890;Name=nifU;gbkey=Gene;gene=nifU;gene_biotype=protein_coding;locus_tag=DOLE_RS03890;old_locus_tag=Dole_0755 NC_009943.1 Protein Homology CDS 878748 879269 . + 0 ID=cds-WP_012174183.1;Parent=gene-DOLE_RS03890;Dbxref=Genbank:WP_012174183.1;Name=WP_012174183.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=nifU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: protein motif:HMM:NF013738.2;locus_tag=DOLE_RS03890;product=Fe-S cluster assembly scaffold protein NifU;protein_id=WP_012174183.1;transl_table=11 NC_009943.1 RefSeq gene 879299 880462 . + . ID=gene-DOLE_RS03895;Name=DOLE_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03895;old_locus_tag=Dole_0756 NC_009943.1 Protein Homology CDS 879299 880462 . + 0 ID=cds-WP_012174184.1;Parent=gene-DOLE_RS03895;Dbxref=Genbank:WP_012174184.1;Name=WP_012174184.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012488.2;locus_tag=DOLE_RS03895;product=cysteine desulfurase family protein;protein_id=WP_012174184.1;transl_table=11 NC_009943.1 RefSeq gene 880542 881048 . - . ID=gene-DOLE_RS03900;Name=DOLE_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03900;old_locus_tag=Dole_0757 NC_009943.1 GeneMarkS-2+ CDS 880542 881048 . - 0 ID=cds-WP_012174185.1;Parent=gene-DOLE_RS03900;Dbxref=Genbank:WP_012174185.1;Name=WP_012174185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03900;product=hypothetical protein;protein_id=WP_012174185.1;transl_table=11 NC_009943.1 RefSeq gene 881077 881598 . - . ID=gene-DOLE_RS03905;Name=DOLE_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03905;old_locus_tag=Dole_0758 NC_009943.1 Protein Homology CDS 881077 881598 . - 0 ID=cds-WP_012174186.1;Parent=gene-DOLE_RS03905;Dbxref=Genbank:WP_012174186.1;Name=WP_012174186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875886.1;locus_tag=DOLE_RS03905;product=DUF3795 domain-containing protein;protein_id=WP_012174186.1;transl_table=11 NC_009943.1 RefSeq gene 881633 882037 . - . ID=gene-DOLE_RS03910;Name=DOLE_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03910;old_locus_tag=Dole_0759 NC_009943.1 Protein Homology CDS 881633 882037 . - 0 ID=cds-WP_012174187.1;Parent=gene-DOLE_RS03910;Dbxref=Genbank:WP_012174187.1;Name=WP_012174187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609301.1;locus_tag=DOLE_RS03910;product=PaaI family thioesterase;protein_id=WP_012174187.1;transl_table=11 NC_009943.1 RefSeq gene 882034 882567 . - . ID=gene-DOLE_RS03915;Name=DOLE_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03915;old_locus_tag=Dole_0760 NC_009943.1 Protein Homology CDS 882034 882567 . - 0 ID=cds-WP_012174188.1;Parent=gene-DOLE_RS03915;Dbxref=Genbank:WP_012174188.1;Name=WP_012174188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875091.1;locus_tag=DOLE_RS03915;product=hemerythrin domain-containing protein;protein_id=WP_012174188.1;transl_table=11 NC_009943.1 RefSeq gene 882643 883290 . - . ID=gene-DOLE_RS03920;Name=DOLE_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03920;old_locus_tag=Dole_0761 NC_009943.1 Protein Homology CDS 882643 883290 . - 0 ID=cds-WP_012174189.1;Parent=gene-DOLE_RS03920;Dbxref=Genbank:WP_012174189.1;Name=WP_012174189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017865526.1;locus_tag=DOLE_RS03920;product=DUF2959 domain-containing protein;protein_id=WP_012174189.1;transl_table=11 NC_009943.1 RefSeq gene 883359 884159 . - . ID=gene-DOLE_RS03925;Name=DOLE_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03925;old_locus_tag=Dole_0762 NC_009943.1 Protein Homology CDS 883359 884159 . - 0 ID=cds-WP_012174190.1;Parent=gene-DOLE_RS03925;Dbxref=Genbank:WP_012174190.1;Name=WP_012174190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403711.1;locus_tag=DOLE_RS03925;product=arsenite methyltransferase;protein_id=WP_012174190.1;transl_table=11 NC_009943.1 RefSeq gene 884466 885734 . - . ID=gene-DOLE_RS03930;Name=DOLE_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03930;old_locus_tag=Dole_0763 NC_009943.1 Protein Homology CDS 884466 885734 . - 0 ID=cds-WP_012174191.1;Parent=gene-DOLE_RS03930;Dbxref=Genbank:WP_012174191.1;Name=WP_012174191.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=DOLE_RS03930;product=MFS transporter;protein_id=WP_012174191.1;transl_table=11 NC_009943.1 RefSeq gene 885912 886346 . - . ID=gene-DOLE_RS18390;Name=DOLE_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18390 NC_009943.1 GeneMarkS-2+ CDS 885912 886346 . - 0 ID=cds-WP_208596992.1;Parent=gene-DOLE_RS18390;Dbxref=Genbank:WP_208596992.1;Name=WP_208596992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18390;product=hypothetical protein;protein_id=WP_208596992.1;transl_table=11 NC_009943.1 RefSeq gene 886452 886751 . + . ID=gene-DOLE_RS18395;Name=DOLE_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18395 NC_009943.1 GeneMarkS-2+ CDS 886452 886751 . + 0 ID=cds-WP_167320833.1;Parent=gene-DOLE_RS18395;Dbxref=Genbank:WP_167320833.1;Name=WP_167320833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18395;product=hypothetical protein;protein_id=WP_167320833.1;transl_table=11 NC_009943.1 RefSeq gene 886995 887660 . - . ID=gene-DOLE_RS03940;Name=DOLE_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03940;old_locus_tag=Dole_0765 NC_009943.1 GeneMarkS-2+ CDS 886995 887660 . - 0 ID=cds-WP_012174193.1;Parent=gene-DOLE_RS03940;Dbxref=Genbank:WP_012174193.1;Name=WP_012174193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03940;product=hypothetical protein;protein_id=WP_012174193.1;transl_table=11 NC_009943.1 RefSeq gene 887740 888369 . - . ID=gene-DOLE_RS03945;Name=DOLE_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03945;old_locus_tag=Dole_0766 NC_009943.1 GeneMarkS-2+ CDS 887740 888369 . - 0 ID=cds-WP_012174194.1;Parent=gene-DOLE_RS03945;Dbxref=Genbank:WP_012174194.1;Name=WP_012174194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS03945;product=type IV pilus assembly PilZ;protein_id=WP_012174194.1;transl_table=11 NC_009943.1 RefSeq gene 888473 890995 . - . ID=gene-DOLE_RS03950;Name=DOLE_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03950;old_locus_tag=Dole_0767 NC_009943.1 Protein Homology CDS 888473 890995 . - 0 ID=cds-WP_012174195.1;Parent=gene-DOLE_RS03950;Dbxref=Genbank:WP_012174195.1;Name=WP_012174195.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: protein motif:HMM:TIGR00361.1;locus_tag=DOLE_RS03950;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_012174195.1;transl_table=11 NC_009943.1 RefSeq gene 891281 892438 . - . ID=gene-DOLE_RS03955;Name=DOLE_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03955;old_locus_tag=Dole_0768 NC_009943.1 Protein Homology CDS 891281 892438 . - 0 ID=cds-WP_012174196.1;Parent=gene-DOLE_RS03955;Dbxref=Genbank:WP_012174196.1;Name=WP_012174196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947595.1;locus_tag=DOLE_RS03955;product=(Fe-S)-binding protein;protein_id=WP_012174196.1;transl_table=11 NC_009943.1 RefSeq gene 892440 893837 . - . ID=gene-DOLE_RS03960;Name=DOLE_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03960;old_locus_tag=Dole_0769 NC_009943.1 Protein Homology CDS 892440 893837 . - 0 ID=cds-WP_012174197.1;Parent=gene-DOLE_RS03960;Dbxref=Genbank:WP_012174197.1;Name=WP_012174197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013714.2;locus_tag=DOLE_RS03960;product=FAD-binding oxidoreductase;protein_id=WP_012174197.1;transl_table=11 NC_009943.1 RefSeq gene 893842 894864 . - . ID=gene-DOLE_RS03965;Name=DOLE_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03965;old_locus_tag=Dole_0770 NC_009943.1 Protein Homology CDS 893842 894864 . - 0 ID=cds-WP_012174198.1;Parent=gene-DOLE_RS03965;Dbxref=Genbank:WP_012174198.1;Name=WP_012174198.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014774.2;locus_tag=DOLE_RS03965;product=(Fe-S)-binding protein;protein_id=WP_012174198.1;transl_table=11 NC_009943.1 RefSeq gene 894929 895666 . - . ID=gene-DOLE_RS16990;Name=DOLE_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16990;old_locus_tag=Dole_0771 NC_009943.1 GeneMarkS-2+ CDS 894929 895666 . - 0 ID=cds-WP_012174199.1;Parent=gene-DOLE_RS16990;Dbxref=Genbank:WP_012174199.1;Name=WP_012174199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16990;product=J domain-containing protein;protein_id=WP_012174199.1;transl_table=11 NC_009943.1 RefSeq gene 895810 898518 . - . ID=gene-DOLE_RS16995;Name=DOLE_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16995;old_locus_tag=Dole_0772 NC_009943.1 Protein Homology CDS 895810 898518 . - 0 ID=cds-WP_012174200.1;Parent=gene-DOLE_RS16995;Dbxref=Genbank:WP_012174200.1;Name=WP_012174200.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012862.2;locus_tag=DOLE_RS16995;product=caspase family protein;protein_id=WP_012174200.1;transl_table=11 NC_009943.1 RefSeq gene 898641 899861 . - . ID=gene-DOLE_RS03980;Name=DOLE_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03980;old_locus_tag=Dole_0773 NC_009943.1 Protein Homology CDS 898641 899861 . - 0 ID=cds-WP_012174201.1;Parent=gene-DOLE_RS03980;Dbxref=Genbank:WP_012174201.1;Name=WP_012174201.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956598.1;locus_tag=DOLE_RS03980;product=aspartate kinase;protein_id=WP_012174201.1;transl_table=11 NC_009943.1 RefSeq gene 899915 900400 . - . ID=gene-DOLE_RS03985;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=DOLE_RS03985;old_locus_tag=Dole_0774 NC_009943.1 Protein Homology CDS 899915 900400 . - 0 ID=cds-WP_167320834.1;Parent=gene-DOLE_RS03985;Dbxref=Genbank:WP_167320834.1;Name=WP_167320834.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR00150.1;locus_tag=DOLE_RS03985;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_167320834.1;transl_table=11 NC_009943.1 RefSeq gene 900363 901964 . - . ID=gene-DOLE_RS03990;Name=DOLE_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS03990;old_locus_tag=Dole_0775 NC_009943.1 Protein Homology CDS 900363 901964 . - 0 ID=cds-WP_012174203.1;Parent=gene-DOLE_RS03990;Dbxref=Genbank:WP_012174203.1;Name=WP_012174203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956600.1;locus_tag=DOLE_RS03990;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_012174203.1;transl_table=11 NC_009943.1 RefSeq gene 902418 903128 . - . ID=gene-DOLE_RS04000;Name=DOLE_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04000;old_locus_tag=Dole_0776 NC_009943.1 Protein Homology CDS 902418 903128 . - 0 ID=cds-WP_012174204.1;Parent=gene-DOLE_RS04000;Dbxref=Genbank:WP_012174204.1;Name=WP_012174204.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174204.1;locus_tag=DOLE_RS04000;product=pyridoxine 5'-phosphate synthase;protein_id=WP_012174204.1;transl_table=11 NC_009943.1 RefSeq gene 903309 903665 . - . ID=gene-DOLE_RS04005;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=DOLE_RS04005;old_locus_tag=Dole_0777 NC_009943.1 Protein Homology CDS 903309 903665 . - 0 ID=cds-WP_041280340.1;Parent=gene-DOLE_RS04005;Dbxref=Genbank:WP_041280340.1;Name=WP_041280340.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963685.1;locus_tag=DOLE_RS04005;product=rRNA maturation RNase YbeY;protein_id=WP_041280340.1;transl_table=11 NC_009943.1 RefSeq gene 903652 906027 . - . ID=gene-DOLE_RS04010;Name=DOLE_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04010;old_locus_tag=Dole_0778 NC_009943.1 Protein Homology CDS 903652 906027 . - 0 ID=cds-WP_012174206.1;Parent=gene-DOLE_RS04010;Dbxref=Genbank:WP_012174206.1;Name=WP_012174206.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019317.2;locus_tag=DOLE_RS04010;product=HDIG domain-containing protein;protein_id=WP_012174206.1;transl_table=11 NC_009943.1 RefSeq gene 906222 907217 . - . ID=gene-DOLE_RS04015;Name=DOLE_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04015;old_locus_tag=Dole_0779 NC_009943.1 Protein Homology CDS 906222 907217 . - 0 ID=cds-WP_012174207.1;Parent=gene-DOLE_RS04015;Dbxref=Genbank:WP_012174207.1;Name=WP_012174207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723999.1;locus_tag=DOLE_RS04015;product=PhoH family protein;protein_id=WP_012174207.1;transl_table=11 NC_009943.1 RefSeq gene 907396 907917 . + . ID=gene-DOLE_RS04020;Name=DOLE_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04020;old_locus_tag=Dole_0780 NC_009943.1 Protein Homology CDS 907396 907917 . + 0 ID=cds-WP_012174208.1;Parent=gene-DOLE_RS04020;Dbxref=Genbank:WP_012174208.1;Name=WP_012174208.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014704.2;locus_tag=DOLE_RS04020;product=CvpA family protein;protein_id=WP_012174208.1;transl_table=11 NC_009943.1 RefSeq gene 907905 908714 . + . ID=gene-DOLE_RS04025;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=DOLE_RS04025;old_locus_tag=Dole_0781 NC_009943.1 Protein Homology CDS 907905 908714 . + 0 ID=cds-WP_012174209.1;Parent=gene-DOLE_RS04025;Dbxref=Genbank:WP_012174209.1;Name=WP_012174209.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876952.1;locus_tag=DOLE_RS04025;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_012174209.1;transl_table=11 NC_009943.1 RefSeq gene 908863 909492 . + . ID=gene-DOLE_RS04030;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=DOLE_RS04030;old_locus_tag=Dole_0782 NC_009943.1 Protein Homology CDS 908863 909492 . + 0 ID=cds-WP_012174210.1;Parent=gene-DOLE_RS04030;Dbxref=Genbank:WP_012174210.1;Name=WP_012174210.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905389.1;locus_tag=DOLE_RS04030;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_012174210.1;transl_table=11 NC_009943.1 RefSeq gene 909486 910265 . + . ID=gene-DOLE_RS04035;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=DOLE_RS04035;old_locus_tag=Dole_0783 NC_009943.1 Protein Homology CDS 909486 910265 . + 0 ID=cds-WP_012174211.1;Parent=gene-DOLE_RS04035;Dbxref=Genbank:WP_012174211.1;Name=WP_012174211.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174211.1;locus_tag=DOLE_RS04035;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_012174211.1;transl_table=11 NC_009943.1 RefSeq gene 910473 911102 . - . ID=gene-DOLE_RS04040;Name=DOLE_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04040;old_locus_tag=Dole_0784 NC_009943.1 GeneMarkS-2+ CDS 910473 911102 . - 0 ID=cds-WP_012174212.1;Parent=gene-DOLE_RS04040;Dbxref=Genbank:WP_012174212.1;Name=WP_012174212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04040;product=hypothetical protein;protein_id=WP_012174212.1;transl_table=11 NC_009943.1 RefSeq gene 911471 912847 . + . ID=gene-DOLE_RS04050;Name=DOLE_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04050;old_locus_tag=Dole_0785 NC_009943.1 GeneMarkS-2+ CDS 911471 912847 . + 0 ID=cds-WP_012174213.1;Parent=gene-DOLE_RS04050;Dbxref=Genbank:WP_012174213.1;Name=WP_012174213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04050;product=hypothetical protein;protein_id=WP_012174213.1;transl_table=11 NC_009943.1 RefSeq gene 912869 914005 . - . ID=gene-DOLE_RS04055;Name=DOLE_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04055;old_locus_tag=Dole_0786 NC_009943.1 Protein Homology CDS 912869 914005 . - 0 ID=cds-WP_012174214.1;Parent=gene-DOLE_RS04055;Dbxref=Genbank:WP_012174214.1;Name=WP_012174214.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=DOLE_RS04055;product=WG repeat-containing protein;protein_id=WP_012174214.1;transl_table=11 NC_009943.1 RefSeq gene 914227 915375 . - . ID=gene-DOLE_RS04060;Name=DOLE_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04060;old_locus_tag=Dole_0787 NC_009943.1 GeneMarkS-2+ CDS 914227 915375 . - 0 ID=cds-WP_012174215.1;Parent=gene-DOLE_RS04060;Dbxref=Genbank:WP_012174215.1;Name=WP_012174215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04060;product=platelet-activating factor acetylhydrolase plasma/intracellular isoform II;protein_id=WP_012174215.1;transl_table=11 NC_009943.1 RefSeq gene 915875 916669 . - . ID=gene-DOLE_RS04065;Name=DOLE_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04065;old_locus_tag=Dole_0788 NC_009943.1 Protein Homology CDS 915875 916669 . - 0 ID=cds-WP_012174216.1;Parent=gene-DOLE_RS04065;Dbxref=Genbank:WP_012174216.1;Name=WP_012174216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040120.1;locus_tag=DOLE_RS04065;product=DUF6498-containing protein;protein_id=WP_012174216.1;transl_table=11 NC_009943.1 RefSeq gene 916725 917600 . - . ID=gene-DOLE_RS17000;Name=DOLE_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17000;old_locus_tag=Dole_0789 NC_009943.1 Protein Homology CDS 916725 917600 . - 0 ID=cds-WP_012174217.1;Parent=gene-DOLE_RS17000;Dbxref=Genbank:WP_012174217.1;Name=WP_012174217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012306.2;locus_tag=DOLE_RS17000;product=aspartyl protease family protein;protein_id=WP_012174217.1;transl_table=11 NC_009943.1 RefSeq gene 917745 919823 . - . ID=gene-DOLE_RS04075;Name=DOLE_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04075;old_locus_tag=Dole_0790 NC_009943.1 GeneMarkS-2+ CDS 917745 919823 . - 0 ID=cds-WP_012174218.1;Parent=gene-DOLE_RS04075;Dbxref=Genbank:WP_012174218.1;Name=WP_012174218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04075;product=two component regulator;protein_id=WP_012174218.1;transl_table=11 NC_009943.1 RefSeq gene 920127 921119 . - . ID=gene-DOLE_RS04080;Name=DOLE_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04080;old_locus_tag=Dole_0791 NC_009943.1 Protein Homology CDS 920127 921119 . - 0 ID=cds-WP_012174219.1;Parent=gene-DOLE_RS04080;Dbxref=Genbank:WP_012174219.1;Name=WP_012174219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968494.1;locus_tag=DOLE_RS04080;product=MBL fold metallo-hydrolase;protein_id=WP_012174219.1;transl_table=11 NC_009943.1 RefSeq gene 921123 921503 . - . ID=gene-DOLE_RS04085;Name=DOLE_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04085;old_locus_tag=Dole_0792 NC_009943.1 Protein Homology CDS 921123 921503 . - 0 ID=cds-WP_012174220.1;Parent=gene-DOLE_RS04085;Dbxref=Genbank:WP_012174220.1;Name=WP_012174220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906456.1;locus_tag=DOLE_RS04085;product=CGGC domain-containing protein;protein_id=WP_012174220.1;transl_table=11 NC_009943.1 RefSeq gene 921704 922666 . + . ID=gene-DOLE_RS04090;Name=DOLE_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04090;old_locus_tag=Dole_0793 NC_009943.1 Protein Homology CDS 921704 922666 . + 0 ID=cds-WP_232362726.1;Parent=gene-DOLE_RS04090;Dbxref=Genbank:WP_232362726.1;Name=WP_232362726.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948987.1;locus_tag=DOLE_RS04090;product=transposase;protein_id=WP_232362726.1;transl_table=11 NC_009943.1 RefSeq gene 922791 924263 . - . ID=gene-DOLE_RS04095;Name=DOLE_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04095;old_locus_tag=Dole_0794 NC_009943.1 Protein Homology CDS 922791 924263 . - 0 ID=cds-WP_012174222.1;Parent=gene-DOLE_RS04095;Dbxref=Genbank:WP_012174222.1;Name=WP_012174222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965024.1;locus_tag=DOLE_RS04095;product=SLC13 family permease;protein_id=WP_012174222.1;transl_table=11 NC_009943.1 RefSeq gene 924644 925204 . - . ID=gene-DOLE_RS04100;Name=DOLE_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04100;old_locus_tag=Dole_0795 NC_009943.1 Protein Homology CDS 924644 925204 . - 0 ID=cds-WP_012174223.1;Parent=gene-DOLE_RS04100;Dbxref=Genbank:WP_012174223.1;Name=WP_012174223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012780.2;locus_tag=DOLE_RS04100;product=CBS domain-containing protein;protein_id=WP_012174223.1;transl_table=11 NC_009943.1 RefSeq gene 925265 926998 . - . ID=gene-DOLE_RS04105;Name=DOLE_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04105;old_locus_tag=Dole_0796 NC_009943.1 Protein Homology CDS 925265 926998 . - 0 ID=cds-WP_012174224.1;Parent=gene-DOLE_RS04105;Dbxref=Genbank:WP_012174224.1;Name=WP_012174224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03545.1;locus_tag=DOLE_RS04105;product=TIGR03545 family protein;protein_id=WP_012174224.1;transl_table=11 NC_009943.1 RefSeq gene 927011 927517 . - . ID=gene-DOLE_RS04110;Name=DOLE_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04110;old_locus_tag=Dole_0797 NC_009943.1 Protein Homology CDS 927011 927517 . - 0 ID=cds-WP_012174225.1;Parent=gene-DOLE_RS04110;Dbxref=Genbank:WP_012174225.1;Name=WP_012174225.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03546.1;locus_tag=DOLE_RS04110;product=TIGR03546 family protein;protein_id=WP_012174225.1;transl_table=11 NC_009943.1 RefSeq gene 927875 928159 . + . ID=gene-DOLE_RS04115;Name=DOLE_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04115;old_locus_tag=Dole_0798 NC_009943.1 Protein Homology CDS 927875 928159 . + 0 ID=cds-WP_012174226.1;Parent=gene-DOLE_RS04115;Dbxref=Genbank:WP_012174226.1;Name=WP_012174226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876100.1;locus_tag=DOLE_RS04115;product=AtpZ/AtpI family protein;protein_id=WP_012174226.1;transl_table=11 NC_009943.1 RefSeq gene 928140 928538 . + . ID=gene-DOLE_RS04120;Name=DOLE_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04120;old_locus_tag=Dole_0799 NC_009943.1 Protein Homology CDS 928140 928538 . + 0 ID=cds-WP_083766518.1;Parent=gene-DOLE_RS04120;Dbxref=Genbank:WP_083766518.1;Name=WP_083766518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015834.2;locus_tag=DOLE_RS04120;product=ATP synthase subunit I;protein_id=WP_083766518.1;transl_table=11 NC_009943.1 RefSeq gene 928606 929571 . + . ID=gene-DOLE_RS04125;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=DOLE_RS04125;old_locus_tag=Dole_0800 NC_009943.1 Protein Homology CDS 928606 929571 . + 0 ID=cds-WP_012174228.1;Parent=gene-DOLE_RS04125;Dbxref=Genbank:WP_012174228.1;Name=WP_012174228.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876097.1;locus_tag=DOLE_RS04125;product=ATP synthase F0 subunit C;protein_id=WP_012174228.1;transl_table=11 NC_009943.1 RefSeq gene 929650 930324 . + . ID=gene-DOLE_RS04130;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=DOLE_RS04130;old_locus_tag=Dole_0801 NC_009943.1 Protein Homology CDS 929650 930324 . + 0 ID=cds-WP_012174229.1;Parent=gene-DOLE_RS04130;Dbxref=Genbank:WP_012174229.1;Name=WP_012174229.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpB;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876098.1;locus_tag=DOLE_RS04130;product=F0F1 ATP synthase subunit A;protein_id=WP_012174229.1;transl_table=11 NC_009943.1 RefSeq gene 930368 930616 . + . ID=gene-DOLE_RS04135;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=DOLE_RS04135;old_locus_tag=Dole_0802 NC_009943.1 Protein Homology CDS 930368 930616 . + 0 ID=cds-WP_012174230.1;Parent=gene-DOLE_RS04135;Dbxref=Genbank:WP_012174230.1;Name=WP_012174230.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876096.1;locus_tag=DOLE_RS04135;product=ATP synthase F0 subunit C;protein_id=WP_012174230.1;transl_table=11 NC_009943.1 RefSeq gene 930766 931224 . + . ID=gene-DOLE_RS04140;Name=DOLE_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04140;old_locus_tag=Dole_0803 NC_009943.1 Protein Homology CDS 930766 931224 . + 0 ID=cds-WP_012174231.1;Parent=gene-DOLE_RS04140;Dbxref=Genbank:WP_012174231.1;Name=WP_012174231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012645.2;locus_tag=DOLE_RS04140;product=ATP synthase F0 subunit B;protein_id=WP_012174231.1;transl_table=11 NC_009943.1 RefSeq gene 931221 931850 . + . ID=gene-DOLE_RS04145;Name=DOLE_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04145;old_locus_tag=Dole_0804 NC_009943.1 Protein Homology CDS 931221 931850 . + 0 ID=cds-WP_012174232.1;Parent=gene-DOLE_RS04145;Dbxref=Genbank:WP_012174232.1;Name=WP_012174232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012645.2;locus_tag=DOLE_RS04145;product=ATP synthase F0 subunit B;protein_id=WP_012174232.1;transl_table=11 NC_009943.1 RefSeq gene 932367 932981 . + . ID=gene-DOLE_RS04150;Name=DOLE_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04150;old_locus_tag=Dole_0805 NC_009943.1 Protein Homology CDS 932367 932981 . + 0 ID=cds-WP_012174233.1;Parent=gene-DOLE_RS04150;Dbxref=Genbank:WP_012174233.1;Name=WP_012174233.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF019961.2;locus_tag=DOLE_RS04150;product=TetR family transcriptional regulator;protein_id=WP_012174233.1;transl_table=11 NC_009943.1 RefSeq gene 932989 934377 . + . ID=gene-DOLE_RS04155;Name=DOLE_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04155;old_locus_tag=Dole_0806 NC_009943.1 Protein Homology CDS 932989 934377 . + 0 ID=cds-WP_012174234.1;Parent=gene-DOLE_RS04155;Dbxref=Genbank:WP_012174234.1;Name=WP_012174234.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=DOLE_RS04155;product=TolC family protein;protein_id=WP_012174234.1;transl_table=11 NC_009943.1 RefSeq gene 934652 935548 . + . ID=gene-DOLE_RS04160;Name=DOLE_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04160;old_locus_tag=Dole_0807 NC_009943.1 Protein Homology CDS 934652 935548 . + 0 ID=cds-WP_041280342.1;Parent=gene-DOLE_RS04160;Dbxref=Genbank:WP_041280342.1;Name=WP_041280342.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027890.2;locus_tag=DOLE_RS04160;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_041280342.1;transl_table=11 NC_009943.1 RefSeq gene 935545 936492 . + . ID=gene-DOLE_RS04165;Name=DOLE_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04165;old_locus_tag=Dole_0808 NC_009943.1 Protein Homology CDS 935545 936492 . + 0 ID=cds-WP_012174236.1;Parent=gene-DOLE_RS04165;Dbxref=Genbank:WP_012174236.1;Name=WP_012174236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=DOLE_RS04165;product=ABC transporter ATP-binding protein;protein_id=WP_012174236.1;transl_table=11 NC_009943.1 RefSeq gene 936479 937252 . + . ID=gene-DOLE_RS04170;Name=DOLE_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04170;old_locus_tag=Dole_0809 NC_009943.1 Protein Homology CDS 936479 937252 . + 0 ID=cds-WP_012174237.1;Parent=gene-DOLE_RS04170;Dbxref=Genbank:WP_012174237.1;Name=WP_012174237.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=DOLE_RS04170;product=ATP-binding cassette domain-containing protein;protein_id=WP_012174237.1;transl_table=11 NC_009943.1 RefSeq gene 937249 938349 . + . ID=gene-DOLE_RS04175;Name=DOLE_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04175;old_locus_tag=Dole_0810 NC_009943.1 Protein Homology CDS 937249 938349 . + 0 ID=cds-WP_012174238.1;Parent=gene-DOLE_RS04175;Dbxref=Genbank:WP_012174238.1;Name=WP_012174238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024110.2;locus_tag=DOLE_RS04175;product=ABC transporter permease;protein_id=WP_012174238.1;transl_table=11 NC_009943.1 RefSeq gene 938374 938538 . + . ID=gene-DOLE_RS18125;Name=DOLE_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18125 NC_009943.1 GeneMarkS-2+ CDS 938374 938538 . + 0 ID=cds-WP_153304351.1;Parent=gene-DOLE_RS18125;Dbxref=Genbank:WP_153304351.1;Name=WP_153304351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18125;product=hypothetical protein;protein_id=WP_153304351.1;transl_table=11 NC_009943.1 RefSeq gene 938544 939677 . + . ID=gene-DOLE_RS04180;Name=DOLE_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04180;old_locus_tag=Dole_0811 NC_009943.1 Protein Homology CDS 938544 939677 . + 0 ID=cds-WP_012174239.1;Parent=gene-DOLE_RS04180;Dbxref=Genbank:WP_012174239.1;Name=WP_012174239.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024110.2;locus_tag=DOLE_RS04180;product=ABC transporter permease;protein_id=WP_012174239.1;transl_table=11 NC_009943.1 RefSeq gene 939922 940482 . + . ID=gene-DOLE_RS04185;Name=DOLE_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04185;old_locus_tag=Dole_0812 NC_009943.1 Protein Homology CDS 939922 940482 . + 0 ID=cds-WP_012174240.1;Parent=gene-DOLE_RS04185;Dbxref=Genbank:WP_012174240.1;Name=WP_012174240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175975.1;locus_tag=DOLE_RS04185;product=ORF6N domain-containing protein;protein_id=WP_012174240.1;transl_table=11 NC_009943.1 RefSeq gene 940543 940848 . - . ID=gene-DOLE_RS04190;Name=DOLE_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04190;old_locus_tag=Dole_0813 NC_009943.1 GeneMarkS-2+ CDS 940543 940848 . - 0 ID=cds-WP_012174241.1;Parent=gene-DOLE_RS04190;Dbxref=Genbank:WP_012174241.1;Name=WP_012174241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04190;product=hypothetical protein;protein_id=WP_012174241.1;transl_table=11 NC_009943.1 RefSeq gene 940835 942034 . - . ID=gene-DOLE_RS17005;Name=DOLE_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17005;old_locus_tag=Dole_0814 NC_009943.1 Protein Homology CDS 940835 942034 . - 0 ID=cds-WP_012174242.1;Parent=gene-DOLE_RS17005;Dbxref=Genbank:WP_012174242.1;Name=WP_012174242.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.2;locus_tag=DOLE_RS17005;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_012174242.1;transl_table=11 NC_009943.1 RefSeq gene 942027 942839 . - . ID=gene-DOLE_RS04200;Name=DOLE_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04200;old_locus_tag=Dole_0815 NC_009943.1 Protein Homology CDS 942027 942839 . - 0 ID=cds-WP_012174243.1;Parent=gene-DOLE_RS04200;Dbxref=Genbank:WP_012174243.1;Name=WP_012174243.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020962.2;locus_tag=DOLE_RS04200;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_012174243.1;transl_table=11 NC_009943.1 RefSeq gene 943234 943899 . - . ID=gene-DOLE_RS17010;Name=DOLE_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17010;old_locus_tag=Dole_0816 NC_009943.1 Protein Homology CDS 943234 943899 . - 0 ID=cds-WP_012174244.1;Parent=gene-DOLE_RS17010;Dbxref=Genbank:WP_012174244.1;Name=WP_012174244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS17010;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012174244.1;transl_table=11 NC_009943.1 RefSeq gene 944217 944981 . + . ID=gene-DOLE_RS17015;Name=DOLE_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17015;old_locus_tag=Dole_0817 NC_009943.1 Protein Homology CDS 944217 944981 . + 0 ID=cds-WP_012174245.1;Parent=gene-DOLE_RS17015;Dbxref=Genbank:WP_012174245.1;Name=WP_012174245.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018066.2;locus_tag=DOLE_RS17015;product=acetoacetate decarboxylase family protein;protein_id=WP_012174245.1;transl_table=11 NC_009943.1 RefSeq gene 945002 946414 . + . ID=gene-DOLE_RS04215;Name=DOLE_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04215;old_locus_tag=Dole_0818 NC_009943.1 Protein Homology CDS 945002 946414 . + 0 ID=cds-WP_012174246.1;Parent=gene-DOLE_RS04215;Dbxref=Genbank:WP_012174246.1;Name=WP_012174246.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014789.2;locus_tag=DOLE_RS04215;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012174246.1;transl_table=11 NC_009943.1 RefSeq gene 946436 947671 . + . ID=gene-DOLE_RS04220;Name=DOLE_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04220;old_locus_tag=Dole_0819 NC_009943.1 Protein Homology CDS 946436 947671 . + 0 ID=cds-WP_012174247.1;Parent=gene-DOLE_RS04220;Dbxref=Genbank:WP_012174247.1;Name=WP_012174247.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: protein motif:HMM:NF012656.2;locus_tag=DOLE_RS04220;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012174247.1;transl_table=11 NC_009943.1 RefSeq gene 948229 949386 . - . ID=gene-DOLE_RS04225;Name=DOLE_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04225;old_locus_tag=Dole_0820 NC_009943.1 Protein Homology CDS 948229 949386 . - 0 ID=cds-WP_041280343.1;Parent=gene-DOLE_RS04225;Dbxref=Genbank:WP_041280343.1;Name=WP_041280343.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03187.1;locus_tag=DOLE_RS04225;product=DGQHR domain-containing protein;protein_id=WP_041280343.1;transl_table=11 NC_009943.1 RefSeq gene 949994 950821 . - . ID=gene-DOLE_RS17870;Name=DOLE_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17870;old_locus_tag=Dole_0821 NC_009943.1 Protein Homology CDS 949994 950821 . - 0 ID=cds-WP_083766647.1;Parent=gene-DOLE_RS17870;Dbxref=Genbank:WP_083766647.1;Name=WP_083766647.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:TIGR00571.1;locus_tag=DOLE_RS17870;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_083766647.1;transl_table=11 NC_009943.1 RefSeq gene 951032 952765 . - . ID=gene-DOLE_RS04235;Name=DOLE_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04235;old_locus_tag=Dole_0822 NC_009943.1 Protein Homology CDS 951032 952765 . - 0 ID=cds-WP_012174250.1;Parent=gene-DOLE_RS04235;Dbxref=Genbank:WP_012174250.1;Name=WP_012174250.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=DOLE_RS04235;product=restriction endonuclease subunit S;protein_id=WP_012174250.1;transl_table=11 NC_009943.1 RefSeq gene 952762 954243 . - . ID=gene-DOLE_RS04240;Name=DOLE_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04240;old_locus_tag=Dole_0823 NC_009943.1 Protein Homology CDS 952762 954243 . - 0 ID=cds-WP_012174251.1;Parent=gene-DOLE_RS04240;Dbxref=Genbank:WP_012174251.1;Name=WP_012174251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723373.1;locus_tag=DOLE_RS04240;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_012174251.1;transl_table=11 NC_009943.1 RefSeq gene 954240 956591 . - . ID=gene-DOLE_RS04245;Name=DOLE_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04245;old_locus_tag=Dole_0824 NC_009943.1 Protein Homology CDS 954240 956591 . - 0 ID=cds-WP_012174252.1;Parent=gene-DOLE_RS04245;Dbxref=Genbank:WP_012174252.1;Name=WP_012174252.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013164758.1;locus_tag=DOLE_RS04245;product=DEAD/DEAH box helicase family protein;protein_id=WP_012174252.1;transl_table=11 NC_009943.1 RefSeq gene 956619 957650 . - . ID=gene-DOLE_RS04250;Name=DOLE_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04250;old_locus_tag=Dole_0825 NC_009943.1 Protein Homology CDS 956619 957650 . - 0 ID=cds-WP_041280345.1;Parent=gene-DOLE_RS04250;Dbxref=Genbank:WP_041280345.1;Name=WP_041280345.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF016362.2;locus_tag=DOLE_RS04250;product=restriction endonuclease;protein_id=WP_041280345.1;transl_table=11 NC_009943.1 RefSeq gene 958032 958616 . + . ID=gene-DOLE_RS04255;Name=DOLE_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04255;old_locus_tag=Dole_0826 NC_009943.1 Protein Homology CDS 958032 958616 . + 0 ID=cds-WP_012174254.1;Parent=gene-DOLE_RS04255;Dbxref=Genbank:WP_012174254.1;Name=WP_012174254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024734.2;locus_tag=DOLE_RS04255;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_012174254.1;transl_table=11 NC_009943.1 RefSeq gene 958603 959265 . + . ID=gene-DOLE_RS04260;Name=DOLE_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04260;old_locus_tag=Dole_0827 NC_009943.1 Protein Homology CDS 958603 959265 . + 0 ID=cds-WP_012174255.1;Parent=gene-DOLE_RS04260;Dbxref=Genbank:WP_012174255.1;Name=WP_012174255.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.2;locus_tag=DOLE_RS04260;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_012174255.1;transl_table=11 NC_009943.1 RefSeq gene 959505 961034 . + . ID=gene-DOLE_RS04265;Name=DOLE_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04265;old_locus_tag=Dole_0828 NC_009943.1 Protein Homology CDS 959505 961034 . + 0 ID=cds-WP_012174256.1;Parent=gene-DOLE_RS04265;Dbxref=Genbank:WP_012174256.1;Name=WP_012174256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609305.1;locus_tag=DOLE_RS04265;product=Fic family protein;protein_id=WP_012174256.1;transl_table=11 NC_009943.1 RefSeq gene 961200 961853 . - . ID=gene-DOLE_RS18555;Name=DOLE_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18555 NC_009943.1 Protein Homology CDS 961200 961853 . - 0 ID=cds-WP_232362739.1;Parent=gene-DOLE_RS18555;Dbxref=Genbank:WP_232362739.1;Name=WP_232362739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=DOLE_RS18555;product=DUF4143 domain-containing protein;protein_id=WP_232362739.1;transl_table=11 NC_009943.1 RefSeq pseudogene 962043 962438 . - . ID=gene-DOLE_RS18560;Name=DOLE_RS18560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DOLE_RS18560;partial=true;pseudo=true;start_range=.,962043 NC_009943.1 Protein Homology CDS 962043 962438 . - 0 ID=cds-DOLE_RS18560;Parent=gene-DOLE_RS18560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024571.2;locus_tag=DOLE_RS18560;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,962043;transl_table=11 NC_009943.1 RefSeq gene 962918 963787 . + . ID=gene-DOLE_RS04275;Name=DOLE_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04275;old_locus_tag=Dole_0830 NC_009943.1 Protein Homology CDS 962918 963787 . + 0 ID=cds-WP_012174258.1;Parent=gene-DOLE_RS04275;Dbxref=Genbank:WP_012174258.1;Name=WP_012174258.1;Ontology_term=GO:0006631,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF006143.0;locus_tag=DOLE_RS04275;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_012174258.1;transl_table=11 NC_009943.1 RefSeq gene 963910 965580 . - . ID=gene-DOLE_RS04280;Name=panP;gbkey=Gene;gene=panP;gene_biotype=protein_coding;locus_tag=DOLE_RS04280;old_locus_tag=Dole_0831 NC_009943.1 Protein Homology CDS 963910 965580 . - 0 ID=cds-WP_052294247.1;Parent=gene-DOLE_RS04280;Dbxref=Genbank:WP_052294247.1;Name=WP_052294247.1;Ontology_term=GO:0015940,GO:0016831;gbkey=CDS;gene=panP;go_function=carboxy-lyase activity|0016831||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963640.1;locus_tag=DOLE_RS04280;product=putative pyridoxal-dependent aspartate 1-decarboxylase;protein_id=WP_052294247.1;transl_table=11 NC_009943.1 RefSeq gene 965654 965974 . + . ID=gene-DOLE_RS18130;Name=DOLE_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18130 NC_009943.1 GeneMarkS-2+ CDS 965654 965974 . + 0 ID=cds-WP_153304353.1;Parent=gene-DOLE_RS18130;Dbxref=Genbank:WP_153304353.1;Name=WP_153304353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18130;product=hypothetical protein;protein_id=WP_153304353.1;transl_table=11 NC_009943.1 RefSeq gene 965986 966429 . + . ID=gene-DOLE_RS04285;Name=DOLE_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04285;old_locus_tag=Dole_0832 NC_009943.1 Protein Homology CDS 965986 966429 . + 0 ID=cds-WP_012174260.1;Parent=gene-DOLE_RS04285;Dbxref=Genbank:WP_012174260.1;Name=WP_012174260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040320.1;locus_tag=DOLE_RS04285;product=amino acid-binding protein;protein_id=WP_012174260.1;transl_table=11 NC_009943.1 RefSeq gene 966496 967647 . + . ID=gene-DOLE_RS04290;Name=DOLE_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04290;old_locus_tag=Dole_0833 NC_009943.1 Protein Homology CDS 966496 967647 . + 0 ID=cds-WP_012174261.1;Parent=gene-DOLE_RS04290;Dbxref=Genbank:WP_012174261.1;Name=WP_012174261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013162349.1;locus_tag=DOLE_RS04290;product=ABC transporter substrate-binding protein;protein_id=WP_012174261.1;transl_table=11 NC_009943.1 RefSeq gene 967924 968826 . + . ID=gene-DOLE_RS04300;Name=DOLE_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04300;old_locus_tag=Dole_0834 NC_009943.1 Protein Homology CDS 967924 968826 . + 0 ID=cds-WP_012174262.1;Parent=gene-DOLE_RS04300;Dbxref=Genbank:WP_012174262.1;Name=WP_012174262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013162348.1;locus_tag=DOLE_RS04300;product=branched-chain amino acid ABC transporter permease;protein_id=WP_012174262.1;transl_table=11 NC_009943.1 RefSeq gene 969101 970108 . + . ID=gene-DOLE_RS04305;Name=DOLE_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04305;old_locus_tag=Dole_0835 NC_009943.1 Protein Homology CDS 969101 970108 . + 0 ID=cds-WP_012174263.1;Parent=gene-DOLE_RS04305;Dbxref=Genbank:WP_012174263.1;Name=WP_012174263.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014684.2;locus_tag=DOLE_RS04305;product=branched-chain amino acid ABC transporter permease;protein_id=WP_012174263.1;transl_table=11 NC_009943.1 RefSeq gene 970105 970866 . + . ID=gene-DOLE_RS04310;Name=DOLE_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04310;old_locus_tag=Dole_0836 NC_009943.1 Protein Homology CDS 970105 970866 . + 0 ID=cds-WP_012174264.1;Parent=gene-DOLE_RS04310;Dbxref=Genbank:WP_012174264.1;Name=WP_012174264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015722822.1;locus_tag=DOLE_RS04310;product=ABC transporter ATP-binding protein;protein_id=WP_012174264.1;transl_table=11 NC_009943.1 RefSeq gene 970901 971638 . + . ID=gene-DOLE_RS04315;Name=DOLE_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04315;old_locus_tag=Dole_0837 NC_009943.1 Protein Homology CDS 970901 971638 . + 0 ID=cds-WP_012174265.1;Parent=gene-DOLE_RS04315;Dbxref=Genbank:WP_012174265.1;Name=WP_012174265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610836.1;locus_tag=DOLE_RS04315;product=ABC transporter ATP-binding protein;protein_id=WP_012174265.1;transl_table=11 NC_009943.1 RefSeq gene 971904 973199 . + . ID=gene-DOLE_RS04320;Name=DOLE_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04320;old_locus_tag=Dole_0838 NC_009943.1 Protein Homology CDS 971904 973199 . + 0 ID=cds-WP_012174266.1;Parent=gene-DOLE_RS04320;Dbxref=Genbank:WP_012174266.1;Name=WP_012174266.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=DOLE_RS04320;product=phenylacetate--CoA ligase;protein_id=WP_012174266.1;transl_table=11 NC_009943.1 RefSeq gene 973247 973633 . + . ID=gene-DOLE_RS04325;Name=DOLE_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04325;old_locus_tag=Dole_0839 NC_009943.1 Protein Homology CDS 973247 973633 . + 0 ID=cds-WP_012174267.1;Parent=gene-DOLE_RS04325;Dbxref=Genbank:WP_012174267.1;Name=WP_012174267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949780.1;locus_tag=DOLE_RS04325;product=YajD family HNH nuclease;protein_id=WP_012174267.1;transl_table=11 NC_009943.1 RefSeq gene 973670 973999 . + . ID=gene-DOLE_RS04330;Name=DOLE_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04330;old_locus_tag=Dole_0840 NC_009943.1 GeneMarkS-2+ CDS 973670 973999 . + 0 ID=cds-WP_012174268.1;Parent=gene-DOLE_RS04330;Dbxref=Genbank:WP_012174268.1;Name=WP_012174268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04330;product=hypothetical protein;protein_id=WP_012174268.1;transl_table=11 NC_009943.1 RefSeq gene 974401 975000 . + . ID=gene-DOLE_RS04335;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=DOLE_RS04335;old_locus_tag=Dole_0841 NC_009943.1 Protein Homology CDS 974401 975000 . + 0 ID=cds-WP_012174269.1;Parent=gene-DOLE_RS04335;Dbxref=Genbank:WP_012174269.1;Name=WP_012174269.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015902931.1;locus_tag=DOLE_RS04335;product=thiol peroxidase;protein_id=WP_012174269.1;transl_table=11 NC_009943.1 RefSeq gene 975316 983811 . + . ID=gene-DOLE_RS17020;Name=DOLE_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17020;old_locus_tag=Dole_0842 NC_009943.1 Protein Homology CDS 975316 983811 . + 0 ID=cds-WP_012174270.1;Parent=gene-DOLE_RS17020;Dbxref=Genbank:WP_012174270.1;Name=WP_012174270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174580.1;locus_tag=DOLE_RS17020;product=putative Ig domain-containing protein;protein_id=WP_012174270.1;transl_table=11 NC_009943.1 RefSeq gene 983824 984141 . + . ID=gene-DOLE_RS04345;Name=DOLE_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04345;old_locus_tag=Dole_0843 NC_009943.1 GeneMarkS-2+ CDS 983824 984141 . + 0 ID=cds-WP_012174271.1;Parent=gene-DOLE_RS04345;Dbxref=Genbank:WP_012174271.1;Name=WP_012174271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04345;product=hypothetical protein;protein_id=WP_012174271.1;transl_table=11 NC_009943.1 RefSeq gene 984246 985268 . + . ID=gene-DOLE_RS04350;Name=DOLE_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04350;old_locus_tag=Dole_0844 NC_009943.1 Protein Homology CDS 984246 985268 . + 0 ID=cds-WP_012174272.1;Parent=gene-DOLE_RS04350;Dbxref=Genbank:WP_012174272.1;Name=WP_012174272.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588569.1;locus_tag=DOLE_RS04350;product=transposase;protein_id=WP_012174272.1;transl_table=11 NC_009943.1 RefSeq gene 985606 988368 . + . ID=gene-DOLE_RS17875;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=DOLE_RS17875 NC_009943.1 Protein Homology CDS 985606 988368 . + 0 ID=cds-WP_083766519.1;Parent=gene-DOLE_RS17875;Dbxref=Genbank:WP_083766519.1;Name=WP_083766519.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949068.1;locus_tag=DOLE_RS17875;product=formate dehydrogenase subunit alpha;protein_id=WP_083766519.1;transl_except=(pos:986734..986736%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 988602 990656 . - . ID=gene-DOLE_RS04365;Name=DOLE_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04365;old_locus_tag=Dole_0847 NC_009943.1 Protein Homology CDS 988602 990656 . - 0 ID=cds-WP_012174275.1;Parent=gene-DOLE_RS04365;Dbxref=Genbank:WP_012174275.1;Name=WP_012174275.1;Ontology_term=GO:0005975,GO:0003824,GO:0043169;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876434.1;locus_tag=DOLE_RS04365;product=alpha amylase C-terminal domain-containing protein;protein_id=WP_012174275.1;transl_table=11 NC_009943.1 RefSeq gene 990681 992201 . - . ID=gene-DOLE_RS04370;Name=DOLE_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04370;old_locus_tag=Dole_0848 NC_009943.1 Protein Homology CDS 990681 992201 . - 0 ID=cds-WP_012174276.1;Parent=gene-DOLE_RS04370;Dbxref=Genbank:WP_012174276.1;Name=WP_012174276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957946.1;locus_tag=DOLE_RS04370;product=glycogen/starch synthase;protein_id=WP_012174276.1;transl_table=11 NC_009943.1 RefSeq gene 992453 995005 . - . ID=gene-DOLE_RS04375;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=DOLE_RS04375;old_locus_tag=Dole_0849 NC_009943.1 Protein Homology CDS 992453 995005 . - 0 ID=cds-WP_012174277.1;Parent=gene-DOLE_RS04375;Dbxref=Genbank:WP_012174277.1;Name=WP_012174277.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877506.1;locus_tag=DOLE_RS04375;product=alpha-glucan family phosphorylase;protein_id=WP_012174277.1;transl_table=11 NC_009943.1 RefSeq gene 995030 995338 . - . ID=gene-DOLE_RS04380;Name=DOLE_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04380;old_locus_tag=Dole_0850 NC_009943.1 Protein Homology CDS 995030 995338 . - 0 ID=cds-WP_012174278.1;Parent=gene-DOLE_RS04380;Dbxref=Genbank:WP_012174278.1;Name=WP_012174278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074739.1;locus_tag=DOLE_RS04380;product=isoamylase early set domain-containing protein;protein_id=WP_012174278.1;transl_table=11 NC_009943.1 RefSeq gene 995850 1000151 . - . ID=gene-DOLE_RS04385;Name=DOLE_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04385;old_locus_tag=Dole_0851 NC_009943.1 Protein Homology CDS 995850 1000151 . - 0 ID=cds-WP_012174279.1;Parent=gene-DOLE_RS04385;Dbxref=Genbank:WP_012174279.1;Name=WP_012174279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957948.1;locus_tag=DOLE_RS04385;product=glycogen debranching enzyme N-terminal domain-containing protein;protein_id=WP_012174279.1;transl_table=11 NC_009943.1 RefSeq gene 1000806 1001876 . - . ID=gene-DOLE_RS04390;Name=DOLE_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04390;old_locus_tag=Dole_0852 NC_009943.1 Protein Homology CDS 1000806 1001876 . - 0 ID=cds-WP_012174280.1;Parent=gene-DOLE_RS04390;Dbxref=Genbank:WP_012174280.1;Name=WP_012174280.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS04390;product=PilZ domain-containing protein;protein_id=WP_012174280.1;transl_table=11 NC_009943.1 RefSeq gene 1002106 1002591 . - . ID=gene-DOLE_RS04395;Name=DOLE_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04395;old_locus_tag=Dole_0853 NC_009943.1 Protein Homology CDS 1002106 1002591 . - 0 ID=cds-WP_012174281.1;Parent=gene-DOLE_RS04395;Dbxref=Genbank:WP_012174281.1;Name=WP_012174281.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015004.2;locus_tag=DOLE_RS04395;product=pyrimidine dimer DNA glycosylase/endonuclease V;protein_id=WP_012174281.1;transl_table=11 NC_009943.1 RefSeq gene 1002588 1003547 . - . ID=gene-DOLE_RS04400;Name=DOLE_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04400;old_locus_tag=Dole_0854 NC_009943.1 Protein Homology CDS 1002588 1003547 . - 0 ID=cds-WP_012174282.1;Parent=gene-DOLE_RS04400;Dbxref=Genbank:WP_012174282.1;Name=WP_012174282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019474.2;locus_tag=DOLE_RS04400;product=alpha/beta hydrolase;protein_id=WP_012174282.1;transl_table=11 NC_009943.1 RefSeq gene 1003544 1005568 . - . ID=gene-DOLE_RS04405;Name=DOLE_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04405;old_locus_tag=Dole_0855 NC_009943.1 Protein Homology CDS 1003544 1005568 . - 0 ID=cds-WP_012174283.1;Parent=gene-DOLE_RS04405;Dbxref=Genbank:WP_012174283.1;Name=WP_012174283.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=DOLE_RS04405;product=cation:proton antiporter;protein_id=WP_012174283.1;transl_table=11 NC_009943.1 RefSeq gene 1005609 1006478 . - . ID=gene-DOLE_RS04410;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=DOLE_RS04410;old_locus_tag=Dole_0856 NC_009943.1 Protein Homology CDS 1005609 1006478 . - 0 ID=cds-WP_012174284.1;Parent=gene-DOLE_RS04410;Dbxref=Genbank:WP_012174284.1;Name=WP_012174284.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174284.1;locus_tag=DOLE_RS04410;product=zinc transporter ZupT;protein_id=WP_012174284.1;transl_table=11 NC_009943.1 RefSeq gene 1006928 1007260 . - . ID=gene-DOLE_RS04415;Name=DOLE_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04415;old_locus_tag=Dole_0857 NC_009943.1 Protein Homology CDS 1006928 1007260 . - 0 ID=cds-WP_012174285.1;Parent=gene-DOLE_RS04415;Dbxref=Genbank:WP_012174285.1;Name=WP_012174285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006752.0;locus_tag=DOLE_RS04415;product=DUF3147 family protein;protein_id=WP_012174285.1;transl_table=11 NC_009943.1 RefSeq gene 1007416 1007772 . - . ID=gene-DOLE_RS04420;Name=DOLE_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04420;old_locus_tag=Dole_0858 NC_009943.1 Protein Homology CDS 1007416 1007772 . - 0 ID=cds-WP_012174286.1;Parent=gene-DOLE_RS04420;Dbxref=Genbank:WP_012174286.1;Name=WP_012174286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725357.1;locus_tag=DOLE_RS04420;product=DMT family protein;protein_id=WP_012174286.1;transl_table=11 NC_009943.1 RefSeq gene 1007945 1009129 . - . ID=gene-DOLE_RS04425;Name=DOLE_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04425;old_locus_tag=Dole_0859 NC_009943.1 Protein Homology CDS 1007945 1009129 . - 0 ID=cds-WP_012174287.1;Parent=gene-DOLE_RS04425;Dbxref=Genbank:WP_012174287.1;Name=WP_012174287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958164.1;locus_tag=DOLE_RS04425;product=hemolysin family protein;protein_id=WP_012174287.1;transl_table=11 NC_009943.1 RefSeq gene 1009300 1010409 . + . ID=gene-DOLE_RS04430;Name=DOLE_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04430;old_locus_tag=Dole_0860 NC_009943.1 Protein Homology CDS 1009300 1010409 . + 0 ID=cds-WP_041280810.1;Parent=gene-DOLE_RS04430;Dbxref=Genbank:WP_041280810.1;Name=WP_041280810.1;Ontology_term=GO:0006002;gbkey=CDS;go_process=fructose 6-phosphate metabolic process|0006002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610163.1;locus_tag=DOLE_RS04430;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_041280810.1;transl_table=11 NC_009943.1 RefSeq gene 1010419 1012104 . + . ID=gene-DOLE_RS04435;Name=DOLE_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04435;old_locus_tag=Dole_0861 NC_009943.1 Protein Homology CDS 1010419 1012104 . + 0 ID=cds-WP_012174289.1;Parent=gene-DOLE_RS04435;Dbxref=Genbank:WP_012174289.1;Name=WP_012174289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878305.1;locus_tag=DOLE_RS04435;product=radical SAM protein;protein_id=WP_012174289.1;transl_table=11 NC_009943.1 RefSeq gene 1012068 1012520 . - . ID=gene-DOLE_RS04440;Name=DOLE_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04440;old_locus_tag=Dole_0862 NC_009943.1 GeneMarkS-2+ CDS 1012068 1012520 . - 0 ID=cds-WP_012174290.1;Parent=gene-DOLE_RS04440;Dbxref=Genbank:WP_012174290.1;Name=WP_012174290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04440;product=hypothetical protein;protein_id=WP_012174290.1;transl_table=11 NC_009943.1 RefSeq gene 1012517 1012948 . - . ID=gene-DOLE_RS04445;Name=DOLE_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04445;old_locus_tag=Dole_0863 NC_009943.1 GeneMarkS-2+ CDS 1012517 1012948 . - 0 ID=cds-WP_012174291.1;Parent=gene-DOLE_RS04445;Dbxref=Genbank:WP_012174291.1;Name=WP_012174291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04445;product=hypothetical protein;protein_id=WP_012174291.1;transl_table=11 NC_009943.1 RefSeq gene 1013300 1014043 . + . ID=gene-DOLE_RS04450;Name=DOLE_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04450;old_locus_tag=Dole_0864 NC_009943.1 GeneMarkS-2+ CDS 1013300 1014043 . + 0 ID=cds-WP_012174292.1;Parent=gene-DOLE_RS04450;Dbxref=Genbank:WP_012174292.1;Name=WP_012174292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04450;product=hypothetical protein;protein_id=WP_012174292.1;transl_table=11 NC_009943.1 RefSeq gene 1014108 1014344 . + . ID=gene-DOLE_RS04455;Name=DOLE_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04455;old_locus_tag=Dole_0865 NC_009943.1 GeneMarkS-2+ CDS 1014108 1014344 . + 0 ID=cds-WP_153304354.1;Parent=gene-DOLE_RS04455;Dbxref=Genbank:WP_153304354.1;Name=WP_153304354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04455;product=hypothetical protein;protein_id=WP_153304354.1;transl_table=11 NC_009943.1 RefSeq gene 1014558 1014845 . + . ID=gene-DOLE_RS18135;Name=DOLE_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18135 NC_009943.1 GeneMarkS-2+ CDS 1014558 1014845 . + 0 ID=cds-WP_153304355.1;Parent=gene-DOLE_RS18135;Dbxref=Genbank:WP_153304355.1;Name=WP_153304355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18135;product=hypothetical protein;protein_id=WP_153304355.1;transl_table=11 NC_009943.1 RefSeq gene 1014980 1017697 . + . ID=gene-DOLE_RS17025;Name=DOLE_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17025;old_locus_tag=Dole_0867 NC_009943.1 Protein Homology CDS 1014980 1017697 . + 0 ID=cds-WP_012174295.1;Parent=gene-DOLE_RS17025;Dbxref=Genbank:WP_012174295.1;Name=WP_012174295.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS17025;product=PAS domain S-box protein;protein_id=WP_012174295.1;transl_table=11 NC_009943.1 RefSeq gene 1017713 1019140 . + . ID=gene-DOLE_RS04470;Name=DOLE_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04470;old_locus_tag=Dole_0868 NC_009943.1 Protein Homology CDS 1017713 1019140 . + 0 ID=cds-WP_012174296.1;Parent=gene-DOLE_RS04470;Dbxref=Genbank:WP_012174296.1;Name=WP_012174296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025885.2;locus_tag=DOLE_RS04470;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012174296.1;transl_table=11 NC_009943.1 RefSeq gene 1019441 1019830 . + . ID=gene-DOLE_RS04475;Name=DOLE_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04475;old_locus_tag=Dole_0869 NC_009943.1 GeneMarkS-2+ CDS 1019441 1019830 . + 0 ID=cds-WP_012174297.1;Parent=gene-DOLE_RS04475;Dbxref=Genbank:WP_012174297.1;Name=WP_012174297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04475;product=hypothetical protein;protein_id=WP_012174297.1;transl_table=11 NC_009943.1 RefSeq gene 1019847 1020182 . + . ID=gene-DOLE_RS04480;Name=DOLE_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04480;old_locus_tag=Dole_0870 NC_009943.1 Protein Homology CDS 1019847 1020182 . + 0 ID=cds-WP_012174298.1;Parent=gene-DOLE_RS04480;Dbxref=Genbank:WP_012174298.1;Name=WP_012174298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024857.2;locus_tag=DOLE_RS04480;product=STAS domain-containing protein;protein_id=WP_012174298.1;transl_table=11 NC_009943.1 RefSeq gene 1020246 1022330 . + . ID=gene-DOLE_RS04485;Name=DOLE_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04485;old_locus_tag=Dole_0871 NC_009943.1 Protein Homology CDS 1020246 1022330 . + 0 ID=cds-WP_012174299.1;Parent=gene-DOLE_RS04485;Dbxref=Genbank:WP_012174299.1;Name=WP_012174299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS04485;product=chemotaxis protein CheA;protein_id=WP_012174299.1;transl_table=11 NC_009943.1 RefSeq gene 1022327 1024384 . + . ID=gene-DOLE_RS04490;Name=DOLE_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04490;old_locus_tag=Dole_0872 NC_009943.1 Protein Homology CDS 1022327 1024384 . + 0 ID=cds-WP_012174300.1;Parent=gene-DOLE_RS04490;Dbxref=Genbank:WP_012174300.1;Name=WP_012174300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=DOLE_RS04490;product=methyl-accepting chemotaxis protein;protein_id=WP_012174300.1;transl_table=11 NC_009943.1 RefSeq gene 1024430 1026205 . + . ID=gene-DOLE_RS17030;Name=DOLE_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17030;old_locus_tag=Dole_0873 NC_009943.1 Protein Homology CDS 1024430 1026205 . + 0 ID=cds-WP_012174301.1;Parent=gene-DOLE_RS17030;Dbxref=Genbank:WP_012174301.1;Name=WP_012174301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585536.1;locus_tag=DOLE_RS17030;product=methyl-accepting chemotaxis protein;protein_id=WP_012174301.1;transl_table=11 NC_009943.1 RefSeq gene 1026258 1026761 . + . ID=gene-DOLE_RS04500;Name=DOLE_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04500;old_locus_tag=Dole_0874 NC_009943.1 Protein Homology CDS 1026258 1026761 . + 0 ID=cds-WP_012174302.1;Parent=gene-DOLE_RS04500;Dbxref=Genbank:WP_012174302.1;Name=WP_012174302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724391.1;locus_tag=DOLE_RS04500;product=chemotaxis protein CheW;protein_id=WP_012174302.1;transl_table=11 NC_009943.1 RefSeq gene 1026923 1027738 . + . ID=gene-DOLE_RS04505;Name=DOLE_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04505;old_locus_tag=Dole_0875 NC_009943.1 Protein Homology CDS 1026923 1027738 . + 0 ID=cds-WP_012174303.1;Parent=gene-DOLE_RS04505;Dbxref=Genbank:WP_012174303.1;Name=WP_012174303.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013867.2;locus_tag=DOLE_RS04505;product=chemotaxis protein CheR;protein_id=WP_012174303.1;transl_table=11 NC_009943.1 RefSeq gene 1027755 1028210 . + . ID=gene-DOLE_RS04510;Name=DOLE_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04510;old_locus_tag=Dole_0876 NC_009943.1 Protein Homology CDS 1027755 1028210 . + 0 ID=cds-WP_012174304.1;Parent=gene-DOLE_RS04510;Dbxref=Genbank:WP_012174304.1;Name=WP_012174304.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS04510;product=response regulator;protein_id=WP_012174304.1;transl_table=11 NC_009943.1 RefSeq gene 1028207 1028767 . + . ID=gene-DOLE_RS04515;Name=DOLE_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04515;old_locus_tag=Dole_0877 NC_009943.1 Protein Homology CDS 1028207 1028767 . + 0 ID=cds-WP_012174305.1;Parent=gene-DOLE_RS04515;Dbxref=Genbank:WP_012174305.1;Name=WP_012174305.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015908.2;locus_tag=DOLE_RS04515;product=chemotaxis protein CheD;protein_id=WP_012174305.1;transl_table=11 NC_009943.1 RefSeq gene 1028760 1029896 . + . ID=gene-DOLE_RS04520;Name=DOLE_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04520;old_locus_tag=Dole_0878 NC_009943.1 Protein Homology CDS 1028760 1029896 . + 0 ID=cds-WP_012174306.1;Parent=gene-DOLE_RS04520;Dbxref=Genbank:WP_012174306.1;Name=WP_012174306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073236.1;locus_tag=DOLE_RS04520;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_012174306.1;transl_table=11 NC_009943.1 RefSeq gene 1029874 1031775 . + . ID=gene-DOLE_RS04525;Name=DOLE_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04525;old_locus_tag=Dole_0879 NC_009943.1 GeneMarkS-2+ CDS 1029874 1031775 . + 0 ID=cds-WP_012174307.1;Parent=gene-DOLE_RS04525;Dbxref=Genbank:WP_012174307.1;Name=WP_012174307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04525;product=methyl-accepting chemotaxis protein;protein_id=WP_012174307.1;transl_table=11 NC_009943.1 RefSeq gene 1031861 1032232 . + . ID=gene-DOLE_RS04530;Name=DOLE_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04530;old_locus_tag=Dole_0880 NC_009943.1 Protein Homology CDS 1031861 1032232 . + 0 ID=cds-WP_012174308.1;Parent=gene-DOLE_RS04530;Dbxref=Genbank:WP_012174308.1;Name=WP_012174308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011735511.1;locus_tag=DOLE_RS04530;product=response regulator;protein_id=WP_012174308.1;transl_table=11 NC_009943.1 RefSeq gene 1032278 1033849 . + . ID=gene-DOLE_RS04535;Name=DOLE_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04535;old_locus_tag=Dole_0881 NC_009943.1 Protein Homology CDS 1032278 1033849 . + 0 ID=cds-WP_167320835.1;Parent=gene-DOLE_RS04535;Dbxref=Genbank:WP_167320835.1;Name=WP_167320835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DOLE_RS04535;product=PAS domain S-box protein;protein_id=WP_167320835.1;transl_table=11 NC_009943.1 RefSeq gene 1033904 1034458 . + . ID=gene-DOLE_RS04540;Name=DOLE_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04540;old_locus_tag=Dole_0882 NC_009943.1 GeneMarkS-2+ CDS 1033904 1034458 . + 0 ID=cds-WP_012174310.1;Parent=gene-DOLE_RS04540;Dbxref=Genbank:WP_012174310.1;Name=WP_012174310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04540;product=hypothetical protein;protein_id=WP_012174310.1;transl_table=11 NC_009943.1 RefSeq gene 1034521 1034985 . + . ID=gene-DOLE_RS04545;Name=DOLE_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04545;old_locus_tag=Dole_0883 NC_009943.1 Protein Homology CDS 1034521 1034985 . + 0 ID=cds-WP_041280348.1;Parent=gene-DOLE_RS04545;Dbxref=Genbank:WP_041280348.1;Name=WP_041280348.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS04545;product=PilZ domain-containing protein;protein_id=WP_041280348.1;transl_table=11 NC_009943.1 RefSeq gene 1035339 1036616 . - . ID=gene-DOLE_RS04550;Name=DOLE_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04550;old_locus_tag=Dole_0884 NC_009943.1 Protein Homology CDS 1035339 1036616 . - 0 ID=cds-WP_012174312.1;Parent=gene-DOLE_RS04550;Dbxref=Genbank:WP_012174312.1;Name=WP_012174312.1;Ontology_term=GO:0006820,GO:0008509;gbkey=CDS;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946935.1;locus_tag=DOLE_RS04550;product=formate/nitrite family transporter;protein_id=WP_012174312.1;transl_table=11 NC_009943.1 RefSeq gene 1036631 1037248 . - . ID=gene-DOLE_RS17035;Name=DOLE_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17035;old_locus_tag=Dole_0885 NC_009943.1 Protein Homology CDS 1036631 1037248 . - 0 ID=cds-WP_012174313.1;Parent=gene-DOLE_RS17035;Dbxref=Genbank:WP_012174313.1;Name=WP_012174313.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174314.1;locus_tag=DOLE_RS17035;product=response regulator;protein_id=WP_012174313.1;transl_table=11 NC_009943.1 RefSeq gene 1037266 1037889 . - . ID=gene-DOLE_RS04560;Name=DOLE_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04560;old_locus_tag=Dole_0886 NC_009943.1 Protein Homology CDS 1037266 1037889 . - 0 ID=cds-WP_012174314.1;Parent=gene-DOLE_RS04560;Dbxref=Genbank:WP_012174314.1;Name=WP_012174314.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174313.1;locus_tag=DOLE_RS04560;product=response regulator;protein_id=WP_012174314.1;transl_table=11 NC_009943.1 RefSeq gene 1037861 1038250 . - . ID=gene-DOLE_RS04565;Name=DOLE_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04565;old_locus_tag=Dole_0887 NC_009943.1 Protein Homology CDS 1037861 1038250 . - 0 ID=cds-WP_012174315.1;Parent=gene-DOLE_RS04565;Dbxref=Genbank:WP_012174315.1;Name=WP_012174315.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS04565;product=response regulator;protein_id=WP_012174315.1;transl_table=11 NC_009943.1 RefSeq gene 1038247 1040190 . - . ID=gene-DOLE_RS04570;Name=DOLE_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04570;old_locus_tag=Dole_0888 NC_009943.1 Protein Homology CDS 1038247 1040190 . - 0 ID=cds-WP_012174316.1;Parent=gene-DOLE_RS04570;Dbxref=Genbank:WP_012174316.1;Name=WP_012174316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026177.2;locus_tag=DOLE_RS04570;product=cache domain-containing protein;protein_id=WP_012174316.1;transl_table=11 NC_009943.1 RefSeq gene 1040444 1040893 . - . ID=gene-DOLE_RS04575;Name=DOLE_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04575;old_locus_tag=Dole_0889 NC_009943.1 GeneMarkS-2+ CDS 1040444 1040893 . - 0 ID=cds-WP_012174317.1;Parent=gene-DOLE_RS04575;Dbxref=Genbank:WP_012174317.1;Name=WP_012174317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04575;product=hypothetical protein;protein_id=WP_012174317.1;transl_table=11 NC_009943.1 RefSeq gene 1040978 1042591 . - . ID=gene-DOLE_RS04580;Name=sbtM;gbkey=Gene;gene=sbtM;gene_biotype=protein_coding;locus_tag=DOLE_RS04580;old_locus_tag=Dole_0890 NC_009943.1 Protein Homology CDS 1040978 1042591 . - 0 ID=cds-WP_012174318.1;Parent=gene-DOLE_RS04580;Dbxref=Genbank:WP_012174318.1;Name=WP_012174318.1;Ontology_term=GO:0031179,GO:0046500,GO:0051539,GO:1904047;gbkey=CDS;gene=sbtM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptide modification|0031179||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: protein motif:HMM:TIGR04082.1;locus_tag=DOLE_RS04580;product=thio(seleno)oxazole modification radical SAM maturase SbtM;protein_id=WP_012174318.1;transl_table=11 NC_009943.1 RefSeq gene 1042645 1042875 . - . ID=gene-DOLE_RS18565;Name=sbtA;gbkey=Gene;gene=sbtA;gene_biotype=protein_coding;locus_tag=DOLE_RS18565 NC_009943.1 Protein Homology CDS 1042645 1042875 . - 0 ID=cds-WP_167320836.1;Parent=gene-DOLE_RS18565;Dbxref=Genbank:WP_167320836.1;Name=WP_167320836.1;gbkey=CDS;gene=sbtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_141107121.1;locus_tag=DOLE_RS18565;product=SbtA family thio(seleno)oxazole RiPP natural product precursor;protein_id=WP_167320836.1;transl_except=(pos:complement(1042768..1042770)%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 1043210 1044331 . + . ID=gene-DOLE_RS04585;Name=DOLE_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04585;old_locus_tag=Dole_0891 NC_009943.1 Protein Homology CDS 1043210 1044331 . + 0 ID=cds-WP_012174319.1;Parent=gene-DOLE_RS04585;Dbxref=Genbank:WP_012174319.1;Name=WP_012174319.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017828.2;locus_tag=DOLE_RS04585;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012174319.1;transl_table=11 NC_009943.1 RefSeq gene 1044328 1045773 . + . ID=gene-DOLE_RS04590;Name=DOLE_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04590;old_locus_tag=Dole_0892 NC_009943.1 Protein Homology CDS 1044328 1045773 . + 0 ID=cds-WP_012174320.1;Parent=gene-DOLE_RS04590;Dbxref=Genbank:WP_012174320.1;Name=WP_012174320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017828.2;locus_tag=DOLE_RS04590;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012174320.1;transl_table=11 NC_009943.1 RefSeq gene 1045770 1046591 . + . ID=gene-DOLE_RS04595;Name=DOLE_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04595;old_locus_tag=Dole_0893 NC_009943.1 Protein Homology CDS 1045770 1046591 . + 0 ID=cds-WP_012174321.1;Parent=gene-DOLE_RS04595;Dbxref=Genbank:WP_012174321.1;Name=WP_012174321.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: protein motif:HMM:TIGR00241.1;locus_tag=DOLE_RS04595;product=acyl-CoA dehydratase activase;protein_id=WP_012174321.1;transl_table=11 NC_009943.1 RefSeq gene 1046588 1047358 . + . ID=gene-DOLE_RS04600;Name=DOLE_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04600;old_locus_tag=Dole_0894 NC_009943.1 Protein Homology CDS 1046588 1047358 . + 0 ID=cds-WP_012174322.1;Parent=gene-DOLE_RS04600;Dbxref=Genbank:WP_012174322.1;Name=WP_012174322.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: protein motif:HMM:TIGR00241.1;locus_tag=DOLE_RS04600;product=acyl-CoA dehydratase activase;protein_id=WP_012174322.1;transl_table=11 NC_009943.1 RefSeq gene 1047425 1047739 . + . ID=gene-DOLE_RS04605;Name=DOLE_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04605;old_locus_tag=Dole_0895 NC_009943.1 Protein Homology CDS 1047425 1047739 . + 0 ID=cds-WP_012174323.1;Parent=gene-DOLE_RS04605;Dbxref=Genbank:WP_012174323.1;Name=WP_012174323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024949.2;locus_tag=DOLE_RS04605;product=helix-turn-helix domain-containing protein;protein_id=WP_012174323.1;transl_table=11 NC_009943.1 RefSeq gene 1047736 1048965 . + . ID=gene-DOLE_RS04610;Name=DOLE_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04610;old_locus_tag=Dole_0896 NC_009943.1 Protein Homology CDS 1047736 1048965 . + 0 ID=cds-WP_012174324.1;Parent=gene-DOLE_RS04610;Dbxref=Genbank:WP_012174324.1;Name=WP_012174324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019421.2;locus_tag=DOLE_RS04610;product=HipA domain-containing protein;protein_id=WP_012174324.1;transl_table=11 NC_009943.1 RefSeq gene 1049047 1049844 . + . ID=gene-DOLE_RS04615;Name=DOLE_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04615;old_locus_tag=Dole_0897 NC_009943.1 Protein Homology CDS 1049047 1049844 . + 0 ID=cds-WP_012174325.1;Parent=gene-DOLE_RS04615;Dbxref=Genbank:WP_012174325.1;Name=WP_012174325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610097.1;locus_tag=DOLE_RS04615;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012174325.1;transl_table=11 NC_009943.1 RefSeq gene 1049841 1050143 . - . ID=gene-DOLE_RS04620;Name=DOLE_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04620;old_locus_tag=Dole_0898 NC_009943.1 GeneMarkS-2+ CDS 1049841 1050143 . - 0 ID=cds-WP_153304357.1;Parent=gene-DOLE_RS04620;Dbxref=Genbank:WP_153304357.1;Name=WP_153304357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04620;product=hypothetical protein;protein_id=WP_153304357.1;transl_table=11 NC_009943.1 RefSeq gene 1050289 1051089 . + . ID=gene-DOLE_RS04625;Name=DOLE_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04625;old_locus_tag=Dole_0899 NC_009943.1 GeneMarkS-2+ CDS 1050289 1051089 . + 0 ID=cds-WP_012174327.1;Parent=gene-DOLE_RS04625;Dbxref=Genbank:WP_012174327.1;Name=WP_012174327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04625;product=hypothetical protein;protein_id=WP_012174327.1;transl_table=11 NC_009943.1 RefSeq gene 1051153 1051983 . + . ID=gene-DOLE_RS04630;Name=DOLE_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04630;old_locus_tag=Dole_0900 NC_009943.1 Protein Homology CDS 1051153 1051983 . + 0 ID=cds-WP_012174328.1;Parent=gene-DOLE_RS04630;Dbxref=Genbank:WP_012174328.1;Name=WP_012174328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024758.2;locus_tag=DOLE_RS04630;product=serine protease;protein_id=WP_012174328.1;transl_table=11 NC_009943.1 RefSeq gene 1052085 1054103 . + . ID=gene-DOLE_RS04635;Name=DOLE_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04635;old_locus_tag=Dole_0901 NC_009943.1 Protein Homology CDS 1052085 1054103 . + 0 ID=cds-WP_012174329.1;Parent=gene-DOLE_RS04635;Dbxref=Genbank:WP_012174329.1;Name=WP_012174329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.2;locus_tag=DOLE_RS04635;product=AAA family ATPase;protein_id=WP_012174329.1;transl_table=11 NC_009943.1 RefSeq gene 1054221 1055351 . + . ID=gene-DOLE_RS04640;Name=DOLE_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04640;old_locus_tag=Dole_0902 NC_009943.1 Protein Homology CDS 1054221 1055351 . + 0 ID=cds-WP_012174330.1;Parent=gene-DOLE_RS04640;Dbxref=Genbank:WP_012174330.1;Name=WP_012174330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025448.2;locus_tag=DOLE_RS04640;product=DUF4263 domain-containing protein;protein_id=WP_012174330.1;transl_table=11 NC_009943.1 RefSeq gene 1055437 1056084 . + . ID=gene-DOLE_RS04645;Name=DOLE_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04645;old_locus_tag=Dole_0903 NC_009943.1 GeneMarkS-2+ CDS 1055437 1056084 . + 0 ID=cds-WP_012174331.1;Parent=gene-DOLE_RS04645;Dbxref=Genbank:WP_012174331.1;Name=WP_012174331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04645;product=type III restriction endonuclease subunit M;protein_id=WP_012174331.1;transl_table=11 NC_009943.1 RefSeq gene 1056071 1057615 . + . ID=gene-DOLE_RS04650;Name=DOLE_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04650;old_locus_tag=Dole_0904 NC_009943.1 Protein Homology CDS 1056071 1057615 . + 0 ID=cds-WP_012174332.1;Parent=gene-DOLE_RS04650;Dbxref=Genbank:WP_012174332.1;Name=WP_012174332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019291.2;locus_tag=DOLE_RS04650;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_012174332.1;transl_table=11 NC_009943.1 RefSeq gene 1057608 1060169 . + . ID=gene-DOLE_RS04655;Name=DOLE_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04655;old_locus_tag=Dole_0905 NC_009943.1 Protein Homology CDS 1057608 1060169 . + 0 ID=cds-WP_012174333.1;Parent=gene-DOLE_RS04655;Dbxref=Genbank:WP_012174333.1;Name=WP_012174333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022019.2;locus_tag=DOLE_RS04655;product=GIY-YIG nuclease family protein;protein_id=WP_012174333.1;transl_table=11 NC_009943.1 RefSeq gene 1060198 1062546 . - . ID=gene-DOLE_RS04660;Name=DOLE_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04660;old_locus_tag=Dole_0906 NC_009943.1 Protein Homology CDS 1060198 1062546 . - 0 ID=cds-WP_012174334.1;Parent=gene-DOLE_RS04660;Dbxref=Genbank:WP_012174334.1;Name=WP_012174334.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014900.2;locus_tag=DOLE_RS04660;product=formate C-acetyltransferase;protein_id=WP_012174334.1;transl_table=11 NC_009943.1 RefSeq gene 1062590 1062973 . - . ID=gene-DOLE_RS04665;Name=DOLE_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04665;old_locus_tag=Dole_0907 NC_009943.1 Protein Homology CDS 1062590 1062973 . - 0 ID=cds-WP_167320837.1;Parent=gene-DOLE_RS04665;Dbxref=Genbank:WP_167320837.1;Name=WP_167320837.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025910.2;locus_tag=DOLE_RS04665;product=tetratricopeptide repeat protein;protein_id=WP_167320837.1;transl_table=11 NC_009943.1 RefSeq gene 1063053 1065353 . - . ID=gene-DOLE_RS04670;Name=DOLE_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04670;old_locus_tag=Dole_0908 NC_009943.1 Protein Homology CDS 1063053 1065353 . - 0 ID=cds-WP_012174336.1;Parent=gene-DOLE_RS04670;Dbxref=Genbank:WP_012174336.1;Name=WP_012174336.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: protein motif:HMM:TIGR02074.1;locus_tag=DOLE_RS04670;product=PBP1A family penicillin-binding protein;protein_id=WP_012174336.1;transl_table=11 NC_009943.1 RefSeq gene 1065543 1066415 . + . ID=gene-DOLE_RS17040;Name=DOLE_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17040;old_locus_tag=Dole_0909 NC_009943.1 Protein Homology CDS 1065543 1066415 . + 0 ID=cds-WP_052294249.1;Parent=gene-DOLE_RS17040;Dbxref=Genbank:WP_052294249.1;Name=WP_052294249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS17040;product=tetratricopeptide repeat protein;protein_id=WP_052294249.1;transl_table=11 NC_009943.1 RefSeq gene 1066427 1067554 . + . ID=gene-DOLE_RS04680;Name=DOLE_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04680;old_locus_tag=Dole_0910 NC_009943.1 Protein Homology CDS 1066427 1067554 . + 0 ID=cds-WP_041280353.1;Parent=gene-DOLE_RS04680;Dbxref=Genbank:WP_041280353.1;Name=WP_041280353.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025182.2;locus_tag=DOLE_RS04680;product=DUF4185 domain-containing protein;protein_id=WP_041280353.1;transl_table=11 NC_009943.1 RefSeq gene 1067569 1068120 . + . ID=gene-DOLE_RS04685;Name=DOLE_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04685;old_locus_tag=Dole_0911 NC_009943.1 Protein Homology CDS 1067569 1068120 . + 0 ID=cds-WP_012174339.1;Parent=gene-DOLE_RS04685;Dbxref=Genbank:WP_012174339.1;Name=WP_012174339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=DOLE_RS04685;product=methyltransferase domain-containing protein;protein_id=WP_012174339.1;transl_table=11 NC_009943.1 RefSeq gene 1068136 1068552 . + . ID=gene-DOLE_RS04690;Name=DOLE_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04690;old_locus_tag=Dole_0912 NC_009943.1 Protein Homology CDS 1068136 1068552 . + 0 ID=cds-WP_012174340.1;Parent=gene-DOLE_RS04690;Dbxref=Genbank:WP_012174340.1;Name=WP_012174340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00369.1;locus_tag=DOLE_RS04690;product=PaaI family thioesterase;protein_id=WP_012174340.1;transl_table=11 NC_009943.1 RefSeq gene 1068718 1069623 . + . ID=gene-DOLE_RS17045;Name=DOLE_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17045;old_locus_tag=Dole_0913 NC_009943.1 Protein Homology CDS 1068718 1069623 . + 0 ID=cds-WP_012174341.1;Parent=gene-DOLE_RS17045;Dbxref=Genbank:WP_012174341.1;Name=WP_012174341.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS17045;product=response regulator;protein_id=WP_012174341.1;transl_table=11 NC_009943.1 RefSeq gene 1070458 1070853 . + . ID=gene-DOLE_RS04705;Name=DOLE_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04705;old_locus_tag=Dole_0914 NC_009943.1 GeneMarkS-2+ CDS 1070458 1070853 . + 0 ID=cds-WP_012174342.1;Parent=gene-DOLE_RS04705;Dbxref=Genbank:WP_012174342.1;Name=WP_012174342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04705;product=hypothetical protein;protein_id=WP_012174342.1;transl_table=11 NC_009943.1 RefSeq gene 1071045 1071620 . + . ID=gene-DOLE_RS04710;Name=DOLE_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04710;old_locus_tag=Dole_0915 NC_009943.1 Protein Homology CDS 1071045 1071620 . + 0 ID=cds-WP_012174343.1;Parent=gene-DOLE_RS04710;Dbxref=Genbank:WP_012174343.1;Name=WP_012174343.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021587.2;locus_tag=DOLE_RS04710;product=DUF2318 domain-containing protein;protein_id=WP_012174343.1;transl_table=11 NC_009943.1 RefSeq gene 1071623 1072780 . + . ID=gene-DOLE_RS04715;Name=DOLE_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04715;old_locus_tag=Dole_0916 NC_009943.1 Protein Homology CDS 1071623 1072780 . + 0 ID=cds-WP_012174344.1;Parent=gene-DOLE_RS04715;Dbxref=Genbank:WP_012174344.1;Name=WP_012174344.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024116.2;locus_tag=DOLE_RS04715;product=ABC transporter permease;protein_id=WP_012174344.1;transl_table=11 NC_009943.1 RefSeq gene 1072807 1073544 . + . ID=gene-DOLE_RS04720;Name=DOLE_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04720;old_locus_tag=Dole_0917 NC_009943.1 Protein Homology CDS 1072807 1073544 . + 0 ID=cds-WP_012174345.1;Parent=gene-DOLE_RS04720;Dbxref=Genbank:WP_012174345.1;Name=WP_012174345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959307.1;locus_tag=DOLE_RS04720;product=ABC transporter ATP-binding protein;protein_id=WP_012174345.1;transl_table=11 NC_009943.1 RefSeq gene 1073852 1074214 . + . ID=gene-DOLE_RS04725;Name=DOLE_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04725;old_locus_tag=Dole_0918 NC_009943.1 GeneMarkS-2+ CDS 1073852 1074214 . + 0 ID=cds-WP_041280355.1;Parent=gene-DOLE_RS04725;Dbxref=Genbank:WP_041280355.1;Name=WP_041280355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04725;product=hypothetical protein;protein_id=WP_041280355.1;transl_table=11 NC_009943.1 RefSeq gene 1074430 1075341 . + . ID=gene-DOLE_RS17050;Name=DOLE_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17050;old_locus_tag=Dole_0919 NC_009943.1 Protein Homology CDS 1074430 1075341 . + 0 ID=cds-WP_012174347.1;Parent=gene-DOLE_RS17050;Dbxref=Genbank:WP_012174347.1;Name=WP_012174347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013964.2;locus_tag=DOLE_RS17050;product=HNH endonuclease signature motif containing protein;protein_id=WP_012174347.1;transl_table=11 NC_009943.1 RefSeq gene 1075410 1076369 . + . ID=gene-DOLE_RS04735;Name=DOLE_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04735;old_locus_tag=Dole_0920 NC_009943.1 Protein Homology CDS 1075410 1076369 . + 0 ID=cds-WP_083766521.1;Parent=gene-DOLE_RS04735;Dbxref=Genbank:WP_083766521.1;Name=WP_083766521.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025388.2;locus_tag=DOLE_RS04735;product=DUF4238 domain-containing protein;protein_id=WP_083766521.1;transl_table=11 NC_009943.1 RefSeq gene 1076842 1077687 . + . ID=gene-DOLE_RS04740;Name=DOLE_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04740;old_locus_tag=Dole_0921 NC_009943.1 Protein Homology CDS 1076842 1077687 . + 0 ID=cds-WP_012174349.1;Parent=gene-DOLE_RS04740;Dbxref=Genbank:WP_012174349.1;Name=WP_012174349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=DOLE_RS04740;product=CPBP family intramembrane metalloprotease;protein_id=WP_012174349.1;transl_table=11 NC_009943.1 RefSeq gene 1077709 1078572 . + . ID=gene-DOLE_RS04745;Name=DOLE_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04745;old_locus_tag=Dole_0922 NC_009943.1 GeneMarkS-2+ CDS 1077709 1078572 . + 0 ID=cds-WP_012174350.1;Parent=gene-DOLE_RS04745;Dbxref=Genbank:WP_012174350.1;Name=WP_012174350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04745;product=hypothetical protein;protein_id=WP_012174350.1;transl_table=11 NC_009943.1 RefSeq gene 1078759 1079046 . + . ID=gene-DOLE_RS04750;Name=DOLE_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04750;old_locus_tag=Dole_0923 NC_009943.1 GeneMarkS-2+ CDS 1078759 1079046 . + 0 ID=cds-WP_012174351.1;Parent=gene-DOLE_RS04750;Dbxref=Genbank:WP_012174351.1;Name=WP_012174351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04750;product=prevent-host-death protein;protein_id=WP_012174351.1;transl_table=11 NC_009943.1 RefSeq gene 1079043 1079483 . + . ID=gene-DOLE_RS04755;Name=DOLE_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04755;old_locus_tag=Dole_0924 NC_009943.1 Protein Homology CDS 1079043 1079483 . + 0 ID=cds-WP_012174352.1;Parent=gene-DOLE_RS04755;Dbxref=Genbank:WP_012174352.1;Name=WP_012174352.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=endoribonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024861.2;locus_tag=DOLE_RS04755;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_012174352.1;transl_table=11 NC_009943.1 RefSeq gene 1079568 1079972 . + . ID=gene-DOLE_RS04760;Name=DOLE_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04760;old_locus_tag=Dole_0925 NC_009943.1 Protein Homology CDS 1079568 1079972 . + 0 ID=cds-WP_012174353.1;Parent=gene-DOLE_RS04760;Dbxref=Genbank:WP_012174353.1;Name=WP_012174353.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00369.1;locus_tag=DOLE_RS04760;product=PaaI family thioesterase;protein_id=WP_012174353.1;transl_table=11 NC_009943.1 RefSeq gene 1080041 1081060 . + . ID=gene-DOLE_RS04765;Name=DOLE_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04765;old_locus_tag=Dole_0926 NC_009943.1 Protein Homology CDS 1080041 1081060 . + 0 ID=cds-WP_012174354.1;Parent=gene-DOLE_RS04765;Dbxref=Genbank:WP_012174354.1;Name=WP_012174354.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: protein motif:HMM:NF013087.2;locus_tag=DOLE_RS04765;product=methyltransferase;protein_id=WP_012174354.1;transl_table=11 NC_009943.1 RefSeq gene 1081172 1081396 . - . ID=gene-DOLE_RS04770;Name=DOLE_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04770 NC_009943.1 GeneMarkS-2+ CDS 1081172 1081396 . - 0 ID=cds-WP_041280356.1;Parent=gene-DOLE_RS04770;Dbxref=Genbank:WP_041280356.1;Name=WP_041280356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04770;product=LDCC motif putative metal-binding protein;protein_id=WP_041280356.1;transl_table=11 NC_009943.1 RefSeq gene 1081454 1081915 . - . ID=gene-DOLE_RS04775;Name=DOLE_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04775;old_locus_tag=Dole_0927 NC_009943.1 Protein Homology CDS 1081454 1081915 . - 0 ID=cds-WP_012174355.1;Parent=gene-DOLE_RS04775;Dbxref=Genbank:WP_012174355.1;Name=WP_012174355.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025173.2;locus_tag=DOLE_RS04775;product=periplasmic heavy metal sensor;protein_id=WP_012174355.1;transl_table=11 NC_009943.1 RefSeq gene 1082281 1083666 . - . ID=gene-DOLE_RS17055;Name=DOLE_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17055;old_locus_tag=Dole_0928 NC_009943.1 Protein Homology CDS 1082281 1083666 . - 0 ID=cds-WP_012174356.1;Parent=gene-DOLE_RS17055;Dbxref=Genbank:WP_012174356.1;Name=WP_012174356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS17055;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012174356.1;transl_table=11 NC_009943.1 RefSeq gene 1083873 1085498 . + . ID=gene-DOLE_RS04785;Name=DOLE_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04785;old_locus_tag=Dole_0929 NC_009943.1 Protein Homology CDS 1083873 1085498 . + 0 ID=cds-WP_012174357.1;Parent=gene-DOLE_RS04785;Dbxref=Genbank:WP_012174357.1;Name=WP_012174357.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947835.1;locus_tag=DOLE_RS04785;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012174357.1;transl_table=11 NC_009943.1 RefSeq gene 1085645 1086778 . + . ID=gene-DOLE_RS04790;Name=DOLE_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04790;old_locus_tag=Dole_0930 NC_009943.1 Protein Homology CDS 1085645 1086778 . + 0 ID=cds-WP_012174358.1;Parent=gene-DOLE_RS04790;Dbxref=Genbank:WP_012174358.1;Name=WP_012174358.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017828.2;locus_tag=DOLE_RS04790;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012174358.1;transl_table=11 NC_009943.1 RefSeq gene 1086765 1088024 . + . ID=gene-DOLE_RS04795;Name=DOLE_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04795;old_locus_tag=Dole_0931 NC_009943.1 Protein Homology CDS 1086765 1088024 . + 0 ID=cds-WP_012174359.1;Parent=gene-DOLE_RS04795;Dbxref=Genbank:WP_012174359.1;Name=WP_012174359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609399.1;locus_tag=DOLE_RS04795;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012174359.1;transl_table=11 NC_009943.1 RefSeq gene 1088264 1089445 . + . ID=gene-DOLE_RS04800;Name=DOLE_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04800;old_locus_tag=Dole_0932 NC_009943.1 Protein Homology CDS 1088264 1089445 . + 0 ID=cds-WP_012174360.1;Parent=gene-DOLE_RS04800;Dbxref=Genbank:WP_012174360.1;Name=WP_012174360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006102.0;locus_tag=DOLE_RS04800;product=lipid-transfer protein;protein_id=WP_012174360.1;transl_table=11 NC_009943.1 RefSeq gene 1089779 1090921 . + . ID=gene-DOLE_RS04805;Name=DOLE_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04805;old_locus_tag=Dole_0933 NC_009943.1 Protein Homology CDS 1089779 1090921 . + 0 ID=cds-WP_012174361.1;Parent=gene-DOLE_RS04805;Dbxref=Genbank:WP_012174361.1;Name=WP_012174361.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609255.1;locus_tag=DOLE_RS04805;product=nitronate monooxygenase;protein_id=WP_012174361.1;transl_table=11 NC_009943.1 RefSeq gene 1090965 1092155 . + . ID=gene-DOLE_RS04810;Name=DOLE_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04810;old_locus_tag=Dole_0934 NC_009943.1 Protein Homology CDS 1090965 1092155 . + 0 ID=cds-WP_041280357.1;Parent=gene-DOLE_RS04810;Dbxref=Genbank:WP_041280357.1;Name=WP_041280357.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176515.1;locus_tag=DOLE_RS04810;product=acyl-CoA dehydrogenase family protein;protein_id=WP_041280357.1;transl_table=11 NC_009943.1 RefSeq gene 1092320 1093039 . - . ID=gene-DOLE_RS04815;Name=DOLE_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04815;old_locus_tag=Dole_0935 NC_009943.1 GeneMarkS-2+ CDS 1092320 1093039 . - 0 ID=cds-WP_012174363.1;Parent=gene-DOLE_RS04815;Dbxref=Genbank:WP_012174363.1;Name=WP_012174363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04815;product=hypothetical protein;protein_id=WP_012174363.1;transl_table=11 NC_009943.1 RefSeq gene 1093415 1093669 . + . ID=gene-DOLE_RS17885;Name=DOLE_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17885;old_locus_tag=Dole_0936 NC_009943.1 Protein Homology CDS 1093415 1093669 . + 0 ID=cds-WP_012174364.1;Parent=gene-DOLE_RS17885;Dbxref=Genbank:WP_012174364.1;Name=WP_012174364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009523653.1;locus_tag=DOLE_RS17885;product=helix-turn-helix transcriptional regulator;protein_id=WP_012174364.1;transl_table=11 NC_009943.1 RefSeq gene 1093681 1094289 . + . ID=gene-DOLE_RS04830;Name=DOLE_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04830;old_locus_tag=Dole_0937 NC_009943.1 Protein Homology CDS 1093681 1094289 . + 0 ID=cds-WP_041280359.1;Parent=gene-DOLE_RS04830;Dbxref=Genbank:WP_041280359.1;Name=WP_041280359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405794.1;locus_tag=DOLE_RS04830;product=hypothetical protein;protein_id=WP_041280359.1;transl_table=11 NC_009943.1 RefSeq gene 1094286 1095653 . - . ID=gene-DOLE_RS04835;Name=DOLE_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04835;old_locus_tag=Dole_0938 NC_009943.1 Protein Homology CDS 1094286 1095653 . - 0 ID=cds-WP_041280360.1;Parent=gene-DOLE_RS04835;Dbxref=Genbank:WP_041280360.1;Name=WP_041280360.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF013347.2;locus_tag=DOLE_RS04835;product=DNA methyltransferase;protein_id=WP_041280360.1;transl_table=11 NC_009943.1 RefSeq gene 1095668 1096573 . - . ID=gene-DOLE_RS04840;Name=DOLE_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04840;old_locus_tag=Dole_0939 NC_009943.1 Protein Homology CDS 1095668 1096573 . - 0 ID=cds-WP_012174367.1;Parent=gene-DOLE_RS04840;Dbxref=Genbank:WP_012174367.1;Name=WP_012174367.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=DOLE_RS04840;product=site-specific DNA-methyltransferase;protein_id=WP_012174367.1;transl_table=11 NC_009943.1 RefSeq gene 1096596 1097606 . - . ID=gene-DOLE_RS04845;Name=DOLE_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04845;old_locus_tag=Dole_0940 NC_009943.1 Protein Homology CDS 1096596 1097606 . - 0 ID=cds-WP_012174368.1;Parent=gene-DOLE_RS04845;Dbxref=Genbank:WP_012174368.1;Name=WP_012174368.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: protein motif:HMM:NF008453.0;locus_tag=DOLE_RS04845;product=ATP-binding cassette domain-containing protein;protein_id=WP_012174368.1;transl_table=11 NC_009943.1 RefSeq gene 1097682 1098671 . - . ID=gene-DOLE_RS04850;Name=DOLE_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04850;old_locus_tag=Dole_0941 NC_009943.1 Protein Homology CDS 1097682 1098671 . - 0 ID=cds-WP_012174369.1;Parent=gene-DOLE_RS04850;Dbxref=Genbank:WP_012174369.1;Name=WP_012174369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904710.1;locus_tag=DOLE_RS04850;product=ABC transporter ATP-binding protein;protein_id=WP_012174369.1;transl_table=11 NC_009943.1 RefSeq gene 1098694 1100559 . - . ID=gene-DOLE_RS04855;Name=DOLE_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04855;old_locus_tag=Dole_0942 NC_009943.1 Protein Homology CDS 1098694 1100559 . - 0 ID=cds-WP_012174370.1;Parent=gene-DOLE_RS04855;Dbxref=Genbank:WP_012174370.1;Name=WP_012174370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587519.1;locus_tag=DOLE_RS04855;product=extracellular solute-binding protein;protein_id=WP_012174370.1;transl_table=11 NC_009943.1 RefSeq gene 1100743 1101789 . - . ID=gene-DOLE_RS04860;Name=DOLE_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04860;old_locus_tag=Dole_0943 NC_009943.1 Protein Homology CDS 1100743 1101789 . - 0 ID=cds-WP_012174371.1;Parent=gene-DOLE_RS04860;Dbxref=Genbank:WP_012174371.1;Name=WP_012174371.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587222.1;locus_tag=DOLE_RS04860;product=ABC transporter permease subunit;protein_id=WP_012174371.1;transl_table=11 NC_009943.1 RefSeq gene 1102025 1103041 . - . ID=gene-DOLE_RS04865;Name=DOLE_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04865;old_locus_tag=Dole_0944 NC_009943.1 Protein Homology CDS 1102025 1103041 . - 0 ID=cds-WP_012174372.1;Parent=gene-DOLE_RS04865;Dbxref=Genbank:WP_012174372.1;Name=WP_012174372.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878714.1;locus_tag=DOLE_RS04865;product=ABC transporter permease subunit;protein_id=WP_012174372.1;transl_table=11 NC_009943.1 RefSeq gene 1103218 1103610 . - . ID=gene-DOLE_RS04870;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=DOLE_RS04870;old_locus_tag=Dole_0945 NC_009943.1 Protein Homology CDS 1103218 1103610 . - 0 ID=cds-WP_012174373.1;Parent=gene-DOLE_RS04870;Dbxref=Genbank:WP_012174373.1;Name=WP_012174373.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174373.1;locus_tag=DOLE_RS04870;product=30S ribosomal protein S9;protein_id=WP_012174373.1;transl_table=11 NC_009943.1 RefSeq gene 1103629 1104066 . - . ID=gene-DOLE_RS04875;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=DOLE_RS04875;old_locus_tag=Dole_0946 NC_009943.1 Protein Homology CDS 1103629 1104066 . - 0 ID=cds-WP_012174374.1;Parent=gene-DOLE_RS04875;Dbxref=Genbank:WP_012174374.1;Name=WP_012174374.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964687.1;locus_tag=DOLE_RS04875;product=50S ribosomal protein L13;protein_id=WP_012174374.1;transl_table=11 NC_009943.1 RefSeq gene 1104138 1104425 . - . ID=gene-DOLE_RS04880;Name=DOLE_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04880;old_locus_tag=Dole_0947 NC_009943.1 GeneMarkS-2+ CDS 1104138 1104425 . - 0 ID=cds-WP_041280361.1;Parent=gene-DOLE_RS04880;Dbxref=Genbank:WP_041280361.1;Name=WP_041280361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04880;product=hypothetical protein;protein_id=WP_041280361.1;transl_table=11 NC_009943.1 RefSeq gene 1104550 1105617 . - . ID=gene-DOLE_RS04885;Name=DOLE_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04885;old_locus_tag=Dole_0948 NC_009943.1 GeneMarkS-2+ CDS 1104550 1105617 . - 0 ID=cds-WP_012174376.1;Parent=gene-DOLE_RS04885;Dbxref=Genbank:WP_012174376.1;Name=WP_012174376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04885;product=hypothetical protein;protein_id=WP_012174376.1;transl_table=11 NC_009943.1 RefSeq gene 1105709 1106884 . - . ID=gene-DOLE_RS04890;Name=DOLE_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04890;old_locus_tag=Dole_0949 NC_009943.1 GeneMarkS-2+ CDS 1105709 1106884 . - 0 ID=cds-WP_167320838.1;Parent=gene-DOLE_RS04890;Dbxref=Genbank:WP_167320838.1;Name=WP_167320838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04890;product=acetyltransferase;protein_id=WP_167320838.1;transl_table=11 NC_009943.1 RefSeq gene 1106802 1107221 . - . ID=gene-DOLE_RS18405;Name=DOLE_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18405 NC_009943.1 GeneMarkS-2+ CDS 1106802 1107221 . - 0 ID=cds-WP_167320839.1;Parent=gene-DOLE_RS18405;Dbxref=Genbank:WP_167320839.1;Name=WP_167320839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18405;product=hypothetical protein;protein_id=WP_167320839.1;transl_table=11 NC_009943.1 RefSeq gene 1107500 1109122 . + . ID=gene-DOLE_RS04895;Name=DOLE_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04895;old_locus_tag=Dole_0951 NC_009943.1 Protein Homology CDS 1107500 1109122 . + 0 ID=cds-WP_167320840.1;Parent=gene-DOLE_RS04895;Dbxref=Genbank:WP_167320840.1;Name=WP_167320840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=DOLE_RS04895;product=AraC family transcriptional regulator;protein_id=WP_167320840.1;transl_table=11 NC_009943.1 RefSeq gene 1109151 1109312 . - . ID=gene-DOLE_RS17890;Name=DOLE_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17890;old_locus_tag=Dole_0952 NC_009943.1 Protein Homology CDS 1109151 1109312 . - 0 ID=cds-WP_012174380.1;Parent=gene-DOLE_RS17890;Dbxref=Genbank:WP_012174380.1;Name=WP_012174380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959114.1;locus_tag=DOLE_RS17890;product=YqaE/Pmp3 family membrane protein;protein_id=WP_012174380.1;transl_table=11 NC_009943.1 RefSeq gene 1109447 1110673 . - . ID=gene-DOLE_RS04905;Name=DOLE_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04905;old_locus_tag=Dole_0953 NC_009943.1 GeneMarkS-2+ CDS 1109447 1110673 . - 0 ID=cds-WP_012174381.1;Parent=gene-DOLE_RS04905;Dbxref=Genbank:WP_012174381.1;Name=WP_012174381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04905;product=hypothetical protein;protein_id=WP_012174381.1;transl_table=11 NC_009943.1 RefSeq gene 1110827 1111879 . - . ID=gene-DOLE_RS04910;Name=DOLE_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04910;old_locus_tag=Dole_0954 NC_009943.1 Protein Homology CDS 1110827 1111879 . - 0 ID=cds-WP_012174382.1;Parent=gene-DOLE_RS04910;Dbxref=Genbank:WP_012174382.1;Name=WP_012174382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS04910;product=tetratricopeptide repeat protein;protein_id=WP_012174382.1;transl_table=11 NC_009943.1 RefSeq gene 1112252 1115374 . + . ID=gene-DOLE_RS04915;Name=DOLE_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04915;old_locus_tag=Dole_0955 NC_009943.1 Protein Homology CDS 1112252 1115374 . + 0 ID=cds-WP_012174383.1;Parent=gene-DOLE_RS04915;Dbxref=Genbank:WP_012174383.1;Name=WP_012174383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017197.2;locus_tag=DOLE_RS04915;product=DUF748 domain-containing protein;protein_id=WP_012174383.1;transl_table=11 NC_009943.1 RefSeq gene 1115502 1117286 . + . ID=gene-DOLE_RS04920;Name=DOLE_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04920;old_locus_tag=Dole_0956 NC_009943.1 Protein Homology CDS 1115502 1117286 . + 0 ID=cds-WP_012174384.1;Parent=gene-DOLE_RS04920;Dbxref=Genbank:WP_012174384.1;Name=WP_012174384.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022623.2;locus_tag=DOLE_RS04920;product=DUF2961 domain-containing protein;protein_id=WP_012174384.1;transl_table=11 NC_009943.1 RefSeq gene 1117401 1119272 . - . ID=gene-DOLE_RS04925;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=DOLE_RS04925;old_locus_tag=Dole_0957 NC_009943.1 Protein Homology CDS 1117401 1119272 . - 0 ID=cds-WP_012174385.1;Parent=gene-DOLE_RS04925;Dbxref=Genbank:WP_012174385.1;Name=WP_012174385.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070766.1;locus_tag=DOLE_RS04925;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_012174385.1;transl_table=11 NC_009943.1 RefSeq gene 1119440 1120360 . + . ID=gene-DOLE_RS04930;Name=DOLE_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04930;old_locus_tag=Dole_0958 NC_009943.1 Protein Homology CDS 1119440 1120360 . + 0 ID=cds-WP_012174386.1;Parent=gene-DOLE_RS04930;Dbxref=Genbank:WP_012174386.1;Name=WP_012174386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071832.1;locus_tag=DOLE_RS04930;product=YitT family protein;protein_id=WP_012174386.1;transl_table=11 NC_009943.1 RefSeq gene 1120366 1121778 . - . ID=gene-DOLE_RS04935;Name=DOLE_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04935;old_locus_tag=Dole_0959 NC_009943.1 Protein Homology CDS 1120366 1121778 . - 0 ID=cds-WP_012174387.1;Parent=gene-DOLE_RS04935;Dbxref=Genbank:WP_012174387.1;Name=WP_012174387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403292.1;locus_tag=DOLE_RS04935;product=aspartate kinase;protein_id=WP_012174387.1;transl_table=11 NC_009943.1 RefSeq gene 1121788 1122177 . - . ID=gene-DOLE_RS18140;Name=DOLE_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18140;old_locus_tag=Dole_0960 NC_009943.1 Protein Homology CDS 1121788 1122177 . - 0 ID=cds-WP_012174388.1;Parent=gene-DOLE_RS18140;Dbxref=Genbank:WP_012174388.1;Name=WP_012174388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174388.1;locus_tag=DOLE_RS18140;product=ectoine synthase;protein_id=WP_012174388.1;transl_table=11 NC_009943.1 RefSeq gene 1122177 1123451 . - . ID=gene-DOLE_RS04945;Name=ectB;gbkey=Gene;gene=ectB;gene_biotype=protein_coding;locus_tag=DOLE_RS04945;old_locus_tag=Dole_0961 NC_009943.1 Protein Homology CDS 1122177 1123451 . - 0 ID=cds-WP_012174389.1;Parent=gene-DOLE_RS04945;Dbxref=Genbank:WP_012174389.1;Name=WP_012174389.1;Ontology_term=GO:0045303;gbkey=CDS;gene=ectB;go_function=diaminobutyrate-2-oxoglutarate transaminase activity|0045303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403294.1;locus_tag=DOLE_RS04945;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_012174389.1;transl_table=11 NC_009943.1 RefSeq gene 1123656 1124162 . - . ID=gene-DOLE_RS04950;Name=ectA;gbkey=Gene;gene=ectA;gene_biotype=protein_coding;locus_tag=DOLE_RS04950;old_locus_tag=Dole_0962 NC_009943.1 Protein Homology CDS 1123656 1124162 . - 0 ID=cds-WP_012174390.1;Parent=gene-DOLE_RS04950;Dbxref=Genbank:WP_012174390.1;Name=WP_012174390.1;Ontology_term=GO:0019491,GO:0033816;gbkey=CDS;gene=ectA;go_function=diaminobutyrate acetyltransferase activity|0033816||IEA;go_process=ectoine biosynthetic process|0019491||IEA;inference=COORDINATES: protein motif:HMM:TIGR02406.1;locus_tag=DOLE_RS04950;product=diaminobutyrate acetyltransferase;protein_id=WP_012174390.1;transl_table=11 NC_009943.1 RefSeq gene 1124163 1125095 . - . ID=gene-DOLE_RS04955;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=DOLE_RS04955;old_locus_tag=Dole_0963 NC_009943.1 Protein Homology CDS 1124163 1125095 . - 0 ID=cds-WP_012174391.1;Parent=gene-DOLE_RS04955;Dbxref=Genbank:WP_012174391.1;Name=WP_012174391.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174391.1;locus_tag=DOLE_RS04955;product=hydroxymethylbilane synthase;protein_id=WP_012174391.1;transl_table=11 NC_009943.1 RefSeq gene 1125894 1126829 . + . ID=gene-DOLE_RS04960;Name=DOLE_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04960;old_locus_tag=Dole_0964 NC_009943.1 Protein Homology CDS 1125894 1126829 . + 0 ID=cds-WP_012174392.1;Parent=gene-DOLE_RS04960;Dbxref=Genbank:WP_012174392.1;Name=WP_012174392.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905057.1;locus_tag=DOLE_RS04960;product=TIGR01212 family radical SAM protein;protein_id=WP_012174392.1;transl_table=11 NC_009943.1 RefSeq gene 1126875 1127087 . - . ID=gene-DOLE_RS04965;Name=DOLE_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04965;old_locus_tag=Dole_0965 NC_009943.1 Protein Homology CDS 1126875 1127087 . - 0 ID=cds-WP_012174393.1;Parent=gene-DOLE_RS04965;Dbxref=Genbank:WP_012174393.1;Name=WP_012174393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073394.1;locus_tag=DOLE_RS04965;product=dodecin family protein;protein_id=WP_012174393.1;transl_table=11 NC_009943.1 RefSeq gene 1127492 1129021 . + . ID=gene-DOLE_RS04970;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=DOLE_RS04970;old_locus_tag=Dole_0966 NC_009943.1 Protein Homology CDS 1127492 1129021 . + 0 ID=cds-WP_012174394.1;Parent=gene-DOLE_RS04970;Dbxref=Genbank:WP_012174394.1;Name=WP_012174394.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875047.1;locus_tag=DOLE_RS04970;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_012174394.1;transl_table=11 NC_009943.1 RefSeq gene 1129028 1129819 . + . ID=gene-DOLE_RS04975;Name=DOLE_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04975;old_locus_tag=Dole_0967 NC_009943.1 GeneMarkS-2+ CDS 1129028 1129819 . + 0 ID=cds-WP_012174395.1;Parent=gene-DOLE_RS04975;Dbxref=Genbank:WP_012174395.1;Name=WP_012174395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04975;product=hypothetical protein;protein_id=WP_012174395.1;transl_table=11 NC_009943.1 RefSeq gene 1129879 1130625 . - . ID=gene-DOLE_RS04980;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=DOLE_RS04980;old_locus_tag=Dole_0968 NC_009943.1 Protein Homology CDS 1129879 1130625 . - 0 ID=cds-WP_012174396.1;Parent=gene-DOLE_RS04980;Dbxref=Genbank:WP_012174396.1;Name=WP_012174396.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174396.1;locus_tag=DOLE_RS04980;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_012174396.1;transl_table=11 NC_009943.1 RefSeq gene 1130749 1131498 . + . ID=gene-DOLE_RS04985;Name=larB;gbkey=Gene;gene=larB;gene_biotype=protein_coding;locus_tag=DOLE_RS04985;old_locus_tag=Dole_0969 NC_009943.1 Protein Homology CDS 1130749 1131498 . + 0 ID=cds-WP_012174397.1;Parent=gene-DOLE_RS04985;Dbxref=Genbank:WP_012174397.1;Name=WP_012174397.1;Ontology_term=GO:0006189,GO:0016787;gbkey=CDS;gene=larB;go_function=hydrolase activity|0016787||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903970.1;locus_tag=DOLE_RS04985;product=nickel pincer cofactor biosynthesis protein LarB;protein_id=WP_012174397.1;transl_table=11 NC_009943.1 RefSeq gene 1131506 1133035 . + . ID=gene-DOLE_RS04990;Name=DOLE_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS04990;old_locus_tag=Dole_0970 NC_009943.1 GeneMarkS-2+ CDS 1131506 1133035 . + 0 ID=cds-WP_012174398.1;Parent=gene-DOLE_RS04990;Dbxref=Genbank:WP_012174398.1;Name=WP_012174398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS04990;product=HEAT repeat domain-containing protein;protein_id=WP_012174398.1;transl_table=11 NC_009943.1 RefSeq gene 1133011 1133652 . + . ID=gene-DOLE_RS17060;Name=DOLE_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17060;old_locus_tag=Dole_0971 NC_009943.1 Protein Homology CDS 1133011 1133652 . + 0 ID=cds-WP_012174399.1;Parent=gene-DOLE_RS17060;Dbxref=Genbank:WP_012174399.1;Name=WP_012174399.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=DOLE_RS17060;product=CPBP family intramembrane metalloprotease;protein_id=WP_012174399.1;transl_table=11 NC_009943.1 RefSeq gene 1133683 1134438 . - . ID=gene-DOLE_RS05000;Name=DOLE_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05000;old_locus_tag=Dole_0972 NC_009943.1 Protein Homology CDS 1133683 1134438 . - 0 ID=cds-WP_012174400.1;Parent=gene-DOLE_RS05000;Dbxref=Genbank:WP_012174400.1;Name=WP_012174400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588360.1;locus_tag=DOLE_RS05000;product=TIGR00266 family protein;protein_id=WP_012174400.1;transl_table=11 NC_009943.1 RefSeq gene 1134534 1135973 . - . ID=gene-DOLE_RS17065;Name=DOLE_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17065;old_locus_tag=Dole_0973 NC_009943.1 Protein Homology CDS 1134534 1135973 . - 0 ID=cds-WP_153304360.1;Parent=gene-DOLE_RS17065;Dbxref=Genbank:WP_153304360.1;Name=WP_153304360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DOLE_RS17065;product=HD domain-containing protein;protein_id=WP_153304360.1;transl_table=11 NC_009943.1 RefSeq gene 1135970 1136899 . - . ID=gene-DOLE_RS05015;Name=DOLE_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05015;old_locus_tag=Dole_0974 NC_009943.1 Protein Homology CDS 1135970 1136899 . - 0 ID=cds-WP_052294331.1;Parent=gene-DOLE_RS05015;Dbxref=Genbank:WP_052294331.1;Name=WP_052294331.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01297.1;locus_tag=DOLE_RS05015;product=cation diffusion facilitator family transporter;protein_id=WP_052294331.1;transl_table=11 NC_009943.1 RefSeq gene 1136964 1138100 . - . ID=gene-DOLE_RS05020;Name=DOLE_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05020;old_locus_tag=Dole_0975 NC_009943.1 Protein Homology CDS 1136964 1138100 . - 0 ID=cds-WP_012174403.1;Parent=gene-DOLE_RS05020;Dbxref=Genbank:WP_012174403.1;Name=WP_012174403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968153.1;locus_tag=DOLE_RS05020;product=metallophosphoesterase;protein_id=WP_012174403.1;transl_table=11 NC_009943.1 RefSeq gene 1138244 1138612 . + . ID=gene-DOLE_RS05025;Name=DOLE_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05025;old_locus_tag=Dole_0976 NC_009943.1 Protein Homology CDS 1138244 1138612 . + 0 ID=cds-WP_012174404.1;Parent=gene-DOLE_RS05025;Dbxref=Genbank:WP_012174404.1;Name=WP_012174404.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039992.1;locus_tag=DOLE_RS05025;product=SxtJ family membrane protein;protein_id=WP_012174404.1;transl_table=11 NC_009943.1 RefSeq gene 1138800 1138949 . + . ID=gene-DOLE_RS18410;Name=DOLE_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18410;old_locus_tag=Dole_0977 NC_009943.1 Protein Homology CDS 1138800 1138949 . + 0 ID=cds-WP_012174405.1;Parent=gene-DOLE_RS18410;Dbxref=Genbank:WP_012174405.1;Name=WP_012174405.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039953.1;locus_tag=DOLE_RS18410;product=DUF5989 family protein;protein_id=WP_012174405.1;transl_table=11 NC_009943.1 RefSeq gene 1138963 1140834 . + . ID=gene-DOLE_RS05030;Name=DOLE_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05030;old_locus_tag=Dole_0978 NC_009943.1 Protein Homology CDS 1138963 1140834 . + 0 ID=cds-WP_012174406.1;Parent=gene-DOLE_RS05030;Dbxref=Genbank:WP_012174406.1;Name=WP_012174406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404691.1;locus_tag=DOLE_RS05030;product=carbamoyltransferase;protein_id=WP_012174406.1;transl_table=11 NC_009943.1 RefSeq gene 1140815 1141438 . + . ID=gene-DOLE_RS05035;Name=DOLE_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05035;old_locus_tag=Dole_0979 NC_009943.1 Protein Homology CDS 1140815 1141438 . + 0 ID=cds-WP_012174407.1;Parent=gene-DOLE_RS05035;Dbxref=Genbank:WP_012174407.1;Name=WP_012174407.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF013052.2;locus_tag=DOLE_RS05035;product=SET domain-containing protein-lysine N-methyltransferase;protein_id=WP_012174407.1;transl_table=11 NC_009943.1 RefSeq gene 1141452 1145375 . + . ID=gene-DOLE_RS05040;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=DOLE_RS05040;old_locus_tag=Dole_0980 NC_009943.1 Protein Homology CDS 1141452 1145375 . + 0 ID=cds-WP_012174408.1;Parent=gene-DOLE_RS05040;Dbxref=Genbank:WP_012174408.1;Name=WP_012174408.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpA;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: protein motif:HMM:TIGR01967.1;locus_tag=DOLE_RS05040;product=ATP-dependent RNA helicase HrpA;protein_id=WP_012174408.1;transl_table=11 NC_009943.1 RefSeq gene 1145416 1150797 . - . ID=gene-DOLE_RS17070;Name=DOLE_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17070;old_locus_tag=Dole_0981 NC_009943.1 Protein Homology CDS 1145416 1150797 . - 0 ID=cds-WP_167320841.1;Parent=gene-DOLE_RS17070;Dbxref=Genbank:WP_167320841.1;Name=WP_167320841.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS17070;product=PAS domain S-box protein;protein_id=WP_167320841.1;transl_table=11 NC_009943.1 RefSeq gene 1151013 1152470 . + . ID=gene-DOLE_RS05050;Name=DOLE_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05050;old_locus_tag=Dole_0982 NC_009943.1 Protein Homology CDS 1151013 1152470 . + 0 ID=cds-WP_012174410.1;Parent=gene-DOLE_RS05050;Dbxref=Genbank:WP_012174410.1;Name=WP_012174410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012398.2;locus_tag=DOLE_RS05050;product=coniferyl aldehyde dehydrogenase;protein_id=WP_012174410.1;transl_table=11 NC_009943.1 RefSeq gene 1152638 1153366 . - . ID=gene-DOLE_RS05055;Name=DOLE_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05055;old_locus_tag=Dole_0983 NC_009943.1 Protein Homology CDS 1152638 1153366 . - 0 ID=cds-WP_012174411.1;Parent=gene-DOLE_RS05055;Dbxref=Genbank:WP_012174411.1;Name=WP_012174411.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00530.1;locus_tag=DOLE_RS05055;product=lysophospholipid acyltransferase family protein;protein_id=WP_012174411.1;transl_table=11 NC_009943.1 RefSeq gene 1153430 1154524 . - . ID=gene-DOLE_RS05060;Name=DOLE_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05060;old_locus_tag=Dole_0984 NC_009943.1 Protein Homology CDS 1153430 1154524 . - 0 ID=cds-WP_012174412.1;Parent=gene-DOLE_RS05060;Dbxref=Genbank:WP_012174412.1;Name=WP_012174412.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023462.2;locus_tag=DOLE_RS05060;product=DUF3524 domain-containing protein;protein_id=WP_012174412.1;transl_table=11 NC_009943.1 RefSeq gene 1154594 1155466 . - . ID=gene-DOLE_RS05065;Name=DOLE_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05065;old_locus_tag=Dole_0985 NC_009943.1 Protein Homology CDS 1154594 1155466 . - 0 ID=cds-WP_041280366.1;Parent=gene-DOLE_RS05065;Dbxref=Genbank:WP_041280366.1;Name=WP_041280366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586551.1;locus_tag=DOLE_RS05065;product=glycosyltransferase family A protein;protein_id=WP_041280366.1;transl_table=11 NC_009943.1 RefSeq gene 1155695 1157497 . - . ID=gene-DOLE_RS05070;Name=DOLE_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05070;old_locus_tag=Dole_0986 NC_009943.1 Protein Homology CDS 1155695 1157497 . - 0 ID=cds-WP_012174414.1;Parent=gene-DOLE_RS05070;Dbxref=Genbank:WP_012174414.1;Name=WP_012174414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS05070;product=B12-binding domain-containing radical SAM protein;protein_id=WP_012174414.1;transl_table=11 NC_009943.1 RefSeq gene 1157751 1158602 . - . ID=gene-DOLE_RS05075;Name=DOLE_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05075;old_locus_tag=Dole_0987 NC_009943.1 Protein Homology CDS 1157751 1158602 . - 0 ID=cds-WP_012174415.1;Parent=gene-DOLE_RS05075;Dbxref=Genbank:WP_012174415.1;Name=WP_012174415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405228.1;locus_tag=DOLE_RS05075;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_012174415.1;transl_table=11 NC_009943.1 RefSeq gene 1158610 1159752 . - . ID=gene-DOLE_RS05080;Name=DOLE_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05080;old_locus_tag=Dole_0988 NC_009943.1 Protein Homology CDS 1158610 1159752 . - 0 ID=cds-WP_041280367.1;Parent=gene-DOLE_RS05080;Dbxref=Genbank:WP_041280367.1;Name=WP_041280367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968207.1;locus_tag=DOLE_RS05080;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_041280367.1;transl_table=11 NC_009943.1 RefSeq gene 1159812 1160261 . - . ID=gene-DOLE_RS05085;Name=DOLE_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05085;old_locus_tag=Dole_0989 NC_009943.1 Protein Homology CDS 1159812 1160261 . - 0 ID=cds-WP_012174417.1;Parent=gene-DOLE_RS05085;Dbxref=Genbank:WP_012174417.1;Name=WP_012174417.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011189884.1;locus_tag=DOLE_RS05085;product=chemotaxis protein CheW;protein_id=WP_012174417.1;transl_table=11 NC_009943.1 RefSeq gene 1160308 1163565 . - . ID=gene-DOLE_RS05090;Name=DOLE_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05090;old_locus_tag=Dole_0990 NC_009943.1 Protein Homology CDS 1160308 1163565 . - 0 ID=cds-WP_012174418.1;Parent=gene-DOLE_RS05090;Dbxref=Genbank:WP_012174418.1;Name=WP_012174418.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589524.1;locus_tag=DOLE_RS05090;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_012174418.1;transl_table=11 NC_009943.1 RefSeq gene 1163735 1165018 . - . ID=gene-DOLE_RS05095;Name=DOLE_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05095;old_locus_tag=Dole_0991 NC_009943.1 Protein Homology CDS 1163735 1165018 . - 0 ID=cds-WP_012174419.1;Parent=gene-DOLE_RS05095;Dbxref=Genbank:WP_012174419.1;Name=WP_012174419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958843.1;locus_tag=DOLE_RS05095;product=U32 family peptidase;protein_id=WP_012174419.1;transl_table=11 NC_009943.1 RefSeq gene 1165197 1165682 . + . ID=gene-DOLE_RS05100;Name=DOLE_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05100;old_locus_tag=Dole_0992 NC_009943.1 GeneMarkS-2+ CDS 1165197 1165682 . + 0 ID=cds-WP_012174420.1;Parent=gene-DOLE_RS05100;Dbxref=Genbank:WP_012174420.1;Name=WP_012174420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05100;product=hypothetical protein;protein_id=WP_012174420.1;transl_table=11 NC_009943.1 RefSeq gene 1165741 1166178 . + . ID=gene-DOLE_RS05105;Name=DOLE_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05105;old_locus_tag=Dole_0993 NC_009943.1 GeneMarkS-2+ CDS 1165741 1166178 . + 0 ID=cds-WP_012174421.1;Parent=gene-DOLE_RS05105;Dbxref=Genbank:WP_012174421.1;Name=WP_012174421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05105;product=hypothetical protein;protein_id=WP_012174421.1;transl_table=11 NC_009943.1 RefSeq gene 1166178 1167695 . + . ID=gene-DOLE_RS05110;Name=DOLE_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05110;old_locus_tag=Dole_0994 NC_009943.1 Protein Homology CDS 1166178 1167695 . + 0 ID=cds-WP_012174422.1;Parent=gene-DOLE_RS05110;Dbxref=Genbank:WP_012174422.1;Name=WP_012174422.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012935.2;locus_tag=DOLE_RS05110;product=GMC family oxidoreductase;protein_id=WP_012174422.1;transl_table=11 NC_009943.1 RefSeq gene 1167755 1168768 . + . ID=gene-DOLE_RS05115;Name=DOLE_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05115;old_locus_tag=Dole_0995 NC_009943.1 Protein Homology CDS 1167755 1168768 . + 0 ID=cds-WP_012174423.1;Parent=gene-DOLE_RS05115;Dbxref=Genbank:WP_012174423.1;Name=WP_012174423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609955.1;locus_tag=DOLE_RS05115;product=hypothetical protein;protein_id=WP_012174423.1;transl_table=11 NC_009943.1 RefSeq gene 1169143 1169577 . + . ID=gene-DOLE_RS05125;Name=aprB;gbkey=Gene;gene=aprB;gene_biotype=protein_coding;locus_tag=DOLE_RS05125;old_locus_tag=Dole_0997 NC_009943.1 Protein Homology CDS 1169143 1169577 . + 0 ID=cds-WP_012174425.1;Parent=gene-DOLE_RS05125;Dbxref=Genbank:WP_012174425.1;Name=WP_012174425.1;Ontology_term=GO:0019420,GO:0019424,GO:0009973;gbkey=CDS;gene=aprB;go_function=adenylyl-sulfate reductase activity|0009973||IEA;go_process=dissimilatory sulfate reduction|0019420||IEA,sulfide oxidation%2C using siroheme sulfite reductase|0019424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662816.1;locus_tag=DOLE_RS05125;product=adenylyl-sulfate reductase subunit beta;protein_id=WP_012174425.1;transl_table=11 NC_009943.1 RefSeq gene 1169657 1171636 . + . ID=gene-DOLE_RS05130;Name=aprA;gbkey=Gene;gene=aprA;gene_biotype=protein_coding;locus_tag=DOLE_RS05130;old_locus_tag=Dole_0998 NC_009943.1 Protein Homology CDS 1169657 1171636 . + 0 ID=cds-WP_012174426.1;Parent=gene-DOLE_RS05130;Dbxref=Genbank:WP_012174426.1;Name=WP_012174426.1;Ontology_term=GO:0019420,GO:0019424,GO:0009973;gbkey=CDS;gene=aprA;go_function=adenylyl-sulfate reductase activity|0009973||IEA;go_process=dissimilatory sulfate reduction|0019420||IEA,sulfide oxidation%2C using siroheme sulfite reductase|0019424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585405.1;locus_tag=DOLE_RS05130;product=adenylyl-sulfate reductase subunit alpha;protein_id=WP_012174426.1;transl_table=11 NC_009943.1 RefSeq gene 1171930 1173201 . + . ID=gene-DOLE_RS05135;Name=DOLE_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05135;old_locus_tag=Dole_0999 NC_009943.1 Protein Homology CDS 1171930 1173201 . + 0 ID=cds-WP_012174427.1;Parent=gene-DOLE_RS05135;Dbxref=Genbank:WP_012174427.1;Name=WP_012174427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585406.1;locus_tag=DOLE_RS05135;product=CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein;protein_id=WP_012174427.1;transl_table=11 NC_009943.1 RefSeq gene 1173212 1175548 . + . ID=gene-DOLE_RS05140;Name=DOLE_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05140;old_locus_tag=Dole_1000 NC_009943.1 Protein Homology CDS 1173212 1175548 . + 0 ID=cds-WP_012174428.1;Parent=gene-DOLE_RS05140;Dbxref=Genbank:WP_012174428.1;Name=WP_012174428.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014955970.1;locus_tag=DOLE_RS05140;product=FAD-dependent oxidoreductase;protein_id=WP_012174428.1;transl_table=11 NC_009943.1 RefSeq gene 1175585 1176781 . + . ID=gene-DOLE_RS05145;Name=qmoC;gbkey=Gene;gene=qmoC;gene_biotype=protein_coding;locus_tag=DOLE_RS05145;old_locus_tag=Dole_1001 NC_009943.1 Protein Homology CDS 1175585 1176781 . + 0 ID=cds-WP_012174429.1;Parent=gene-DOLE_RS05145;Dbxref=Genbank:WP_012174429.1;Name=WP_012174429.1;gbkey=CDS;gene=qmoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967035.1;locus_tag=DOLE_RS05145;product=quinone-interacting membrane-bound oxidoreductase complex subunit QmoC;protein_id=WP_012174429.1;transl_table=11 NC_009943.1 RefSeq gene 1177046 1178320 . - . ID=gene-DOLE_RS05150;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=DOLE_RS05150;old_locus_tag=Dole_1002 NC_009943.1 Protein Homology CDS 1177046 1178320 . - 0 ID=cds-WP_012174430.1;Parent=gene-DOLE_RS05150;Dbxref=Genbank:WP_012174430.1;Name=WP_012174430.1;Ontology_term=GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947212.1;locus_tag=DOLE_RS05150;product=sulfate adenylyltransferase;protein_id=WP_012174430.1;transl_table=11 NC_009943.1 RefSeq gene 1178563 1181028 . + . ID=gene-DOLE_RS05155;Name=DOLE_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05155;old_locus_tag=Dole_1003 NC_009943.1 Protein Homology CDS 1178563 1181028 . + 0 ID=cds-WP_012174431.1;Parent=gene-DOLE_RS05155;Dbxref=Genbank:WP_012174431.1;Name=WP_012174431.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539;gbkey=CDS;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723019.1;locus_tag=DOLE_RS05155;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_012174431.1;transl_table=11 NC_009943.1 RefSeq gene 1181337 1183532 . + . ID=gene-DOLE_RS05160;Name=DOLE_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05160;old_locus_tag=Dole_1004 NC_009943.1 Protein Homology CDS 1181337 1183532 . + 0 ID=cds-WP_012174432.1;Parent=gene-DOLE_RS05160;Dbxref=Genbank:WP_012174432.1;Name=WP_012174432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609294.1;locus_tag=DOLE_RS05160;product=hypothetical protein;protein_id=WP_012174432.1;transl_table=11 NC_009943.1 RefSeq gene 1183538 1183876 . - . ID=gene-DOLE_RS05165;Name=DOLE_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05165;old_locus_tag=Dole_1005 NC_009943.1 GeneMarkS-2+ CDS 1183538 1183876 . - 0 ID=cds-WP_012174433.1;Parent=gene-DOLE_RS05165;Dbxref=Genbank:WP_012174433.1;Name=WP_012174433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05165;product=hypothetical protein;protein_id=WP_012174433.1;transl_table=11 NC_009943.1 RefSeq gene 1184083 1185243 . + . ID=gene-DOLE_RS05170;Name=DOLE_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05170;old_locus_tag=Dole_1006 NC_009943.1 Protein Homology CDS 1184083 1185243 . + 0 ID=cds-WP_041280370.1;Parent=gene-DOLE_RS05170;Dbxref=Genbank:WP_041280370.1;Name=WP_041280370.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014774.2;locus_tag=DOLE_RS05170;product=(Fe-S)-binding protein;protein_id=WP_041280370.1;transl_table=11 NC_009943.1 RefSeq gene 1185459 1186193 . + . ID=gene-DOLE_RS05175;Name=DOLE_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05175;old_locus_tag=Dole_1007 NC_009943.1 Protein Homology CDS 1185459 1186193 . + 0 ID=cds-WP_012174435.1;Parent=gene-DOLE_RS05175;Dbxref=Genbank:WP_012174435.1;Name=WP_012174435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023646.2;locus_tag=DOLE_RS05175;product=methylenetetrahydrofolate reductase C-terminal domain-containing protein;protein_id=WP_012174435.1;transl_table=11 NC_009943.1 RefSeq gene 1186496 1186840 . + . ID=gene-DOLE_RS05180;Name=DOLE_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05180;old_locus_tag=Dole_1008 NC_009943.1 Protein Homology CDS 1186496 1186840 . + 0 ID=cds-WP_012174436.1;Parent=gene-DOLE_RS05180;Dbxref=Genbank:WP_012174436.1;Name=WP_012174436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017866202.1;locus_tag=DOLE_RS05180;product=ComEA family DNA-binding protein;protein_id=WP_012174436.1;transl_table=11 NC_009943.1 RefSeq gene 1186967 1188874 . + . ID=gene-DOLE_RS05185;Name=DOLE_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05185;old_locus_tag=Dole_1009 NC_009943.1 Protein Homology CDS 1186967 1188874 . + 0 ID=cds-WP_012174437.1;Parent=gene-DOLE_RS05185;Dbxref=Genbank:WP_012174437.1;Name=WP_012174437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013164010.1;locus_tag=DOLE_RS05185;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=WP_012174437.1;transl_table=11 NC_009943.1 RefSeq gene 1188981 1190030 . + . ID=gene-DOLE_RS05190;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=DOLE_RS05190;old_locus_tag=Dole_1010 NC_009943.1 Protein Homology CDS 1188981 1190030 . + 0 ID=cds-WP_012174438.1;Parent=gene-DOLE_RS05190;Dbxref=Genbank:WP_012174438.1;Name=WP_012174438.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609622.1;locus_tag=DOLE_RS05190;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_012174438.1;transl_table=11 NC_009943.1 RefSeq gene 1190054 1190932 . + . ID=gene-DOLE_RS05195;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=DOLE_RS05195;old_locus_tag=Dole_1011 NC_009943.1 Protein Homology CDS 1190054 1190932 . + 0 ID=cds-WP_012174439.1;Parent=gene-DOLE_RS05195;Dbxref=Genbank:WP_012174439.1;Name=WP_012174439.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=DOLE_RS05195;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_012174439.1;transl_table=11 NC_009943.1 RefSeq gene 1190935 1191498 . + . ID=gene-DOLE_RS05200;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=DOLE_RS05200;old_locus_tag=Dole_1012 NC_009943.1 Protein Homology CDS 1190935 1191498 . + 0 ID=cds-WP_012174440.1;Parent=gene-DOLE_RS05200;Dbxref=Genbank:WP_012174440.1;Name=WP_012174440.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610624.1;locus_tag=DOLE_RS05200;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_012174440.1;transl_table=11 NC_009943.1 RefSeq gene 1191768 1193480 . + . ID=gene-DOLE_RS05205;Name=DOLE_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05205;old_locus_tag=Dole_1013 NC_009943.1 Protein Homology CDS 1191768 1193480 . + 0 ID=cds-WP_012174441.1;Parent=gene-DOLE_RS05205;Dbxref=Genbank:WP_012174441.1;Name=WP_012174441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610831.1;locus_tag=DOLE_RS05205;product=bifunctional sulfate adenylyltransferase/adenylylsulfate kinase;protein_id=WP_012174441.1;transl_table=11 NC_009943.1 RefSeq gene 1193509 1194156 . - . ID=gene-DOLE_RS05210;Name=DOLE_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05210;old_locus_tag=Dole_1014 NC_009943.1 Protein Homology CDS 1193509 1194156 . - 0 ID=cds-WP_012174442.1;Parent=gene-DOLE_RS05210;Dbxref=Genbank:WP_012174442.1;Name=WP_012174442.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015823.2;locus_tag=DOLE_RS05210;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_012174442.1;transl_table=11 NC_009943.1 RefSeq gene 1194190 1195155 . - . ID=gene-DOLE_RS05215;Name=DOLE_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05215;old_locus_tag=Dole_1015 NC_009943.1 Protein Homology CDS 1194190 1195155 . - 0 ID=cds-WP_012174443.1;Parent=gene-DOLE_RS05215;Dbxref=Genbank:WP_012174443.1;Name=WP_012174443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014523.2;locus_tag=DOLE_RS05215;product=MlaD family protein;protein_id=WP_012174443.1;transl_table=11 NC_009943.1 RefSeq gene 1195203 1195964 . - . ID=gene-DOLE_RS05220;Name=DOLE_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05220;old_locus_tag=Dole_1016 NC_009943.1 Protein Homology CDS 1195203 1195964 . - 0 ID=cds-WP_012174444.1;Parent=gene-DOLE_RS05220;Dbxref=Genbank:WP_012174444.1;Name=WP_012174444.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947549.1;locus_tag=DOLE_RS05220;product=ATP-binding cassette domain-containing protein;protein_id=WP_012174444.1;transl_table=11 NC_009943.1 RefSeq gene 1195966 1197123 . - . ID=gene-DOLE_RS05225;Name=DOLE_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05225;old_locus_tag=Dole_1017 NC_009943.1 Protein Homology CDS 1195966 1197123 . - 0 ID=cds-WP_012174445.1;Parent=gene-DOLE_RS05225;Dbxref=Genbank:WP_012174445.1;Name=WP_012174445.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014460.2;locus_tag=DOLE_RS05225;product=ABC transporter permease;protein_id=WP_012174445.1;transl_table=11 NC_009943.1 RefSeq gene 1197156 1197344 . - . ID=gene-DOLE_RS05230;Name=DOLE_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05230 NC_009943.1 Protein Homology CDS 1197156 1197344 . - 0 ID=cds-WP_041280371.1;Parent=gene-DOLE_RS05230;Dbxref=Genbank:WP_041280371.1;Name=WP_041280371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968241.1;locus_tag=DOLE_RS05230;product=hypothetical protein;protein_id=WP_041280371.1;transl_table=11 NC_009943.1 RefSeq gene 1197437 1198681 . - . ID=gene-DOLE_RS05235;Name=DOLE_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05235;old_locus_tag=Dole_1018 NC_009943.1 GeneMarkS-2+ CDS 1197437 1198681 . - 0 ID=cds-WP_012174446.1;Parent=gene-DOLE_RS05235;Dbxref=Genbank:WP_012174446.1;Name=WP_012174446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05235;product=hypothetical protein;protein_id=WP_012174446.1;transl_table=11 NC_009943.1 RefSeq gene 1198724 1199926 . - . ID=gene-DOLE_RS05240;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=DOLE_RS05240;old_locus_tag=Dole_1019 NC_009943.1 Protein Homology CDS 1198724 1199926 . - 0 ID=cds-WP_012174447.1;Parent=gene-DOLE_RS05240;Dbxref=Genbank:WP_012174447.1;Name=WP_012174447.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: protein motif:HMM:NF008369.0;locus_tag=DOLE_RS05240;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_012174447.1;transl_table=11 NC_009943.1 RefSeq gene 1199923 1201263 . - . ID=gene-DOLE_RS05245;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=DOLE_RS05245;old_locus_tag=Dole_1020 NC_009943.1 Protein Homology CDS 1199923 1201263 . - 0 ID=cds-WP_012174448.1;Parent=gene-DOLE_RS05245;Dbxref=Genbank:WP_012174448.1;Name=WP_012174448.1;gbkey=CDS;gene=glpB;inference=COORDINATES: protein motif:HMM:NF003720.0;locus_tag=DOLE_RS05245;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_012174448.1;transl_table=11 NC_009943.1 RefSeq gene 1201250 1202908 . - . ID=gene-DOLE_RS05250;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=DOLE_RS05250;old_locus_tag=Dole_1021 NC_009943.1 Protein Homology CDS 1201250 1202908 . - 0 ID=cds-WP_012174449.1;Parent=gene-DOLE_RS05250;Dbxref=Genbank:WP_012174449.1;Name=WP_012174449.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: protein motif:HMM:NF008313.0;locus_tag=DOLE_RS05250;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_012174449.1;transl_table=11 NC_009943.1 RefSeq gene 1203117 1204952 . + . ID=gene-DOLE_RS05255;Name=DOLE_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05255;old_locus_tag=Dole_1022 NC_009943.1 GeneMarkS-2+ CDS 1203117 1204952 . + 0 ID=cds-WP_012174450.1;Parent=gene-DOLE_RS05255;Dbxref=Genbank:WP_012174450.1;Name=WP_012174450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05255;product=hypothetical protein;protein_id=WP_012174450.1;transl_table=11 NC_009943.1 RefSeq gene 1205070 1206674 . - . ID=gene-DOLE_RS05260;Name=DOLE_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05260;old_locus_tag=Dole_1023 NC_009943.1 GeneMarkS-2+ CDS 1205070 1206674 . - 0 ID=cds-WP_012174451.1;Parent=gene-DOLE_RS05260;Dbxref=Genbank:WP_012174451.1;Name=WP_012174451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05260;product=PD40 domain-containing protein;protein_id=WP_012174451.1;transl_table=11 NC_009943.1 RefSeq gene 1206807 1207730 . - . ID=gene-DOLE_RS05265;Name=DOLE_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05265;old_locus_tag=Dole_1024 NC_009943.1 Protein Homology CDS 1206807 1207730 . - 0 ID=cds-WP_012174452.1;Parent=gene-DOLE_RS05265;Dbxref=Genbank:WP_012174452.1;Name=WP_012174452.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS05265;product=MBL fold metallo-hydrolase;protein_id=WP_012174452.1;transl_table=11 NC_009943.1 RefSeq gene 1207787 1209316 . - . ID=gene-DOLE_RS05270;Name=DOLE_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05270;old_locus_tag=Dole_1025 NC_009943.1 Protein Homology CDS 1207787 1209316 . - 0 ID=cds-WP_012174453.1;Parent=gene-DOLE_RS05270;Dbxref=Genbank:WP_012174453.1;Name=WP_012174453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02231.1;locus_tag=DOLE_RS05270;product=DUF4139 domain-containing protein;protein_id=WP_012174453.1;transl_table=11 NC_009943.1 RefSeq gene 1209366 1209491 . - . ID=gene-DOLE_RS18145;Name=DOLE_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18145 NC_009943.1 Protein Homology CDS 1209366 1209491 . - 0 ID=cds-WP_153304361.1;Parent=gene-DOLE_RS18145;Dbxref=Genbank:WP_153304361.1;Name=WP_153304361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033493.0;locus_tag=DOLE_RS18145;product=MetS family NSS transporter small subunit;protein_id=WP_153304361.1;transl_table=11 NC_009943.1 RefSeq gene 1209529 1211028 . - . ID=gene-DOLE_RS05275;Name=DOLE_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05275;old_locus_tag=Dole_1026 NC_009943.1 Protein Homology CDS 1209529 1211028 . - 0 ID=cds-WP_012174454.1;Parent=gene-DOLE_RS05275;Dbxref=Genbank:WP_012174454.1;Name=WP_012174454.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012435.2;locus_tag=DOLE_RS05275;product=sodium-dependent transporter;protein_id=WP_012174454.1;transl_table=11 NC_009943.1 RefSeq gene 1211463 1212506 . - . ID=gene-DOLE_RS05280;Name=DOLE_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05280;old_locus_tag=Dole_1027 NC_009943.1 Protein Homology CDS 1211463 1212506 . - 0 ID=cds-WP_012174455.1;Parent=gene-DOLE_RS05280;Dbxref=Genbank:WP_012174455.1;Name=WP_012174455.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040322.1;locus_tag=DOLE_RS05280;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_012174455.1;transl_table=11 NC_009943.1 RefSeq gene 1212746 1214875 . - . ID=gene-DOLE_RS05285;Name=DOLE_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05285;old_locus_tag=Dole_1028 NC_009943.1 Protein Homology CDS 1212746 1214875 . - 0 ID=cds-WP_012174456.1;Parent=gene-DOLE_RS05285;Dbxref=Genbank:WP_012174456.1;Name=WP_012174456.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589246.1;locus_tag=DOLE_RS05285;product=DEAD/DEAH box helicase;protein_id=WP_012174456.1;transl_table=11 NC_009943.1 RefSeq gene 1214876 1215634 . - . ID=gene-DOLE_RS05290;Name=DOLE_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05290;old_locus_tag=Dole_1029 NC_009943.1 Protein Homology CDS 1214876 1215634 . - 0 ID=cds-WP_012174457.1;Parent=gene-DOLE_RS05290;Dbxref=Genbank:WP_012174457.1;Name=WP_012174457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956687.1;locus_tag=DOLE_RS05290;product=AAA family ATPase;protein_id=WP_012174457.1;transl_table=11 NC_009943.1 RefSeq gene 1215813 1217783 . + . ID=gene-DOLE_RS05295;Name=DOLE_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05295;old_locus_tag=Dole_1030 NC_009943.1 Protein Homology CDS 1215813 1217783 . + 0 ID=cds-WP_012174458.1;Parent=gene-DOLE_RS05295;Dbxref=Genbank:WP_012174458.1;Name=WP_012174458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876076.1;locus_tag=DOLE_RS05295;product=U32 family peptidase;protein_id=WP_012174458.1;transl_table=11 NC_009943.1 RefSeq gene 1218035 1218319 . + . ID=gene-DOLE_RS05300;Name=DOLE_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05300;old_locus_tag=Dole_1031 NC_009943.1 Protein Homology CDS 1218035 1218319 . + 0 ID=cds-WP_012174459.1;Parent=gene-DOLE_RS05300;Dbxref=Genbank:WP_012174459.1;Name=WP_012174459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588246.1;locus_tag=DOLE_RS05300;product=integration host factor subunit alpha;protein_id=WP_012174459.1;transl_table=11 NC_009943.1 RefSeq gene 1218416 1218877 . + . ID=gene-DOLE_RS05305;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=DOLE_RS05305;old_locus_tag=Dole_1032 NC_009943.1 Protein Homology CDS 1218416 1218877 . + 0 ID=cds-WP_012174460.1;Parent=gene-DOLE_RS05305;Dbxref=Genbank:WP_012174460.1;Name=WP_012174460.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751354.1;locus_tag=DOLE_RS05305;product=type II secretion system major pseudopilin GspG;protein_id=WP_012174460.1;transl_table=11 NC_009943.1 RefSeq gene 1218951 1219538 . + . ID=gene-DOLE_RS05310;Name=DOLE_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05310;old_locus_tag=Dole_1033 NC_009943.1 Protein Homology CDS 1218951 1219538 . + 0 ID=cds-WP_012174461.1;Parent=gene-DOLE_RS05310;Dbxref=Genbank:WP_012174461.1;Name=WP_012174461.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=DOLE_RS05310;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_012174461.1;transl_table=11 NC_009943.1 RefSeq gene 1219525 1219950 . + . ID=gene-DOLE_RS05315;Name=DOLE_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05315;old_locus_tag=Dole_1034 NC_009943.1 Protein Homology CDS 1219525 1219950 . + 0 ID=cds-WP_012174462.1;Parent=gene-DOLE_RS05315;Dbxref=Genbank:WP_012174462.1;Name=WP_012174462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=DOLE_RS05315;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_012174462.1;transl_table=11 NC_009943.1 RefSeq gene 1219973 1220641 . + . ID=gene-DOLE_RS05320;Name=DOLE_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05320;old_locus_tag=Dole_1035 NC_009943.1 Protein Homology CDS 1219973 1220641 . + 0 ID=cds-WP_041280374.1;Parent=gene-DOLE_RS05320;Dbxref=Genbank:WP_041280374.1;Name=WP_041280374.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=DOLE_RS05320;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_041280374.1;transl_table=11 NC_009943.1 RefSeq gene 1220638 1221723 . + . ID=gene-DOLE_RS05325;Name=DOLE_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05325;old_locus_tag=Dole_1036 NC_009943.1 Protein Homology CDS 1220638 1221723 . + 0 ID=cds-WP_012174464.1;Parent=gene-DOLE_RS05325;Dbxref=Genbank:WP_012174464.1;Name=WP_012174464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015867.2;locus_tag=DOLE_RS05325;product=general secretion pathway protein GspK;protein_id=WP_012174464.1;transl_table=11 NC_009943.1 RefSeq gene 1221777 1223237 . + . ID=gene-DOLE_RS05330;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=DOLE_RS05330;old_locus_tag=Dole_1037 NC_009943.1 Protein Homology CDS 1221777 1223237 . + 0 ID=cds-WP_012174465.1;Parent=gene-DOLE_RS05330;Dbxref=Genbank:WP_012174465.1;Name=WP_012174465.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:TIGR01709.2;locus_tag=DOLE_RS05330;product=type II secretion system protein GspL;protein_id=WP_012174465.1;transl_table=11 NC_009943.1 RefSeq gene 1223234 1223788 . + . ID=gene-DOLE_RS05335;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=DOLE_RS05335;old_locus_tag=Dole_1038 NC_009943.1 Protein Homology CDS 1223234 1223788 . + 0 ID=cds-WP_012174466.1;Parent=gene-DOLE_RS05335;Dbxref=Genbank:WP_012174466.1;Name=WP_012174466.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:NF016493.2;locus_tag=DOLE_RS05335;product=type II secretion system protein GspM;protein_id=WP_012174466.1;transl_table=11 NC_009943.1 RefSeq gene 1223785 1224669 . + . ID=gene-DOLE_RS05340;Name=gspN;gbkey=Gene;gene=gspN;gene_biotype=protein_coding;locus_tag=DOLE_RS05340;old_locus_tag=Dole_1039 NC_009943.1 Protein Homology CDS 1223785 1224669 . + 0 ID=cds-WP_012174467.1;Parent=gene-DOLE_RS05340;Dbxref=Genbank:WP_012174467.1;Name=WP_012174467.1;Ontology_term=GO:0015628;gbkey=CDS;gene=gspN;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:TIGR04411.1;locus_tag=DOLE_RS05340;product=type II secretion system protein GspN;protein_id=WP_012174467.1;transl_table=11 NC_009943.1 RefSeq gene 1224707 1225588 . + . ID=gene-DOLE_RS05345;Name=DOLE_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05345;old_locus_tag=Dole_1040 NC_009943.1 Protein Homology CDS 1224707 1225588 . + 0 ID=cds-WP_012174468.1;Parent=gene-DOLE_RS05345;Dbxref=Genbank:WP_012174468.1;Name=WP_012174468.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF022800.2;locus_tag=DOLE_RS05345;product=PDZ domain-containing protein;protein_id=WP_012174468.1;transl_table=11 NC_009943.1 RefSeq gene 1225639 1228038 . + . ID=gene-DOLE_RS05350;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=DOLE_RS05350;old_locus_tag=Dole_1041 NC_009943.1 Protein Homology CDS 1225639 1228038 . + 0 ID=cds-WP_012174469.1;Parent=gene-DOLE_RS05350;Dbxref=Genbank:WP_012174469.1;Name=WP_012174469.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:TIGR02517.1;locus_tag=DOLE_RS05350;product=type II secretion system secretin GspD;protein_id=WP_012174469.1;transl_table=11 NC_009943.1 RefSeq gene 1228048 1229754 . + . ID=gene-DOLE_RS05355;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=DOLE_RS05355;old_locus_tag=Dole_1042 NC_009943.1 Protein Homology CDS 1228048 1229754 . + 0 ID=cds-WP_232362727.1;Parent=gene-DOLE_RS05355;Dbxref=Genbank:WP_232362727.1;Name=WP_232362727.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723387.1;locus_tag=DOLE_RS05355;product=type II secretion system ATPase GspE;protein_id=WP_232362727.1;transl_table=11 NC_009943.1 RefSeq gene 1229751 1230167 . + . ID=gene-DOLE_RS17075;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=DOLE_RS17075;old_locus_tag=Dole_1043 NC_009943.1 Protein Homology CDS 1229751 1230167 . + 0 ID=cds-WP_012174471.1;Parent=gene-DOLE_RS17075;Dbxref=Genbank:WP_012174471.1;Name=WP_012174471.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903030.1;locus_tag=DOLE_RS17075;product=membrane protein insertion efficiency factor YidD;protein_id=WP_012174471.1;transl_table=11 NC_009943.1 RefSeq gene 1230232 1231140 . + . ID=gene-DOLE_RS05365;Name=DOLE_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05365;old_locus_tag=Dole_1044 NC_009943.1 Protein Homology CDS 1230232 1231140 . + 0 ID=cds-WP_167320844.1;Parent=gene-DOLE_RS05365;Dbxref=Genbank:WP_167320844.1;Name=WP_167320844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025910.2;locus_tag=DOLE_RS05365;product=tetratricopeptide repeat protein;protein_id=WP_167320844.1;transl_table=11 NC_009943.1 RefSeq gene 1231217 1232446 . - . ID=gene-DOLE_RS05370;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=DOLE_RS05370;old_locus_tag=Dole_1045 NC_009943.1 Protein Homology CDS 1231217 1232446 . - 0 ID=cds-WP_012174473.1;Parent=gene-DOLE_RS05370;Dbxref=Genbank:WP_012174473.1;Name=WP_012174473.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877130.1;locus_tag=DOLE_RS05370;product=type II secretion system inner membrane protein GspF;protein_id=WP_012174473.1;transl_table=11 NC_009943.1 RefSeq gene 1232505 1232945 . - . ID=gene-DOLE_RS05375;Name=DOLE_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05375;old_locus_tag=Dole_1046 NC_009943.1 Protein Homology CDS 1232505 1232945 . - 0 ID=cds-WP_041280376.1;Parent=gene-DOLE_RS05375;Dbxref=Genbank:WP_041280376.1;Name=WP_041280376.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=DOLE_RS05375;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_041280376.1;transl_table=11 NC_009943.1 RefSeq gene 1232942 1234366 . - . ID=gene-DOLE_RS05380;Name=DOLE_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05380;old_locus_tag=Dole_1047 NC_009943.1 GeneMarkS-2+ CDS 1232942 1234366 . - 0 ID=cds-WP_012174475.1;Parent=gene-DOLE_RS05380;Dbxref=Genbank:WP_012174475.1;Name=WP_012174475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05380;product=hypothetical protein;protein_id=WP_012174475.1;transl_table=11 NC_009943.1 RefSeq gene 1234654 1237098 . - . ID=gene-DOLE_RS05385;Name=DOLE_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05385;old_locus_tag=Dole_1048 NC_009943.1 Protein Homology CDS 1234654 1237098 . - 0 ID=cds-WP_012174476.1;Parent=gene-DOLE_RS05385;Dbxref=Genbank:WP_012174476.1;Name=WP_012174476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025690.2;locus_tag=DOLE_RS05385;product=DUF4388 domain-containing protein;protein_id=WP_012174476.1;transl_table=11 NC_009943.1 RefSeq gene 1237324 1238313 . + . ID=gene-DOLE_RS05390;Name=DOLE_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05390;old_locus_tag=Dole_1049 NC_009943.1 Protein Homology CDS 1237324 1238313 . + 0 ID=cds-WP_012174477.1;Parent=gene-DOLE_RS05390;Dbxref=Genbank:WP_012174477.1;Name=WP_012174477.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022427.2;locus_tag=DOLE_RS05390;product=DUF2804 domain-containing protein;protein_id=WP_012174477.1;transl_table=11 NC_009943.1 RefSeq gene 1238335 1238991 . + . ID=gene-DOLE_RS05395;Name=dfsP;gbkey=Gene;gene=dfsP;gene_biotype=protein_coding;locus_tag=DOLE_RS05395;old_locus_tag=Dole_1050 NC_009943.1 Protein Homology CDS 1238335 1238991 . + 0 ID=cds-WP_012174478.1;Parent=gene-DOLE_RS05395;Dbxref=Genbank:WP_012174478.1;Name=WP_012174478.1;gbkey=CDS;gene=dfsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_267461764.1;locus_tag=DOLE_RS05395;product=DUF166 family (seleno)protein DfsP;protein_id=WP_012174478.1;transl_table=11 NC_009943.1 RefSeq gene 1239000 1239359 . - . ID=gene-DOLE_RS05400;Name=DOLE_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05400;old_locus_tag=Dole_1051 NC_009943.1 Protein Homology CDS 1239000 1239359 . - 0 ID=cds-WP_012174479.1;Parent=gene-DOLE_RS05400;Dbxref=Genbank:WP_012174479.1;Name=WP_012174479.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS05400;product=PilZ domain-containing protein;protein_id=WP_012174479.1;transl_table=11 NC_009943.1 RefSeq gene 1239802 1241517 . + . ID=gene-DOLE_RS05405;Name=DOLE_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05405;old_locus_tag=Dole_1052 NC_009943.1 Protein Homology CDS 1239802 1241517 . + 0 ID=cds-WP_012174480.1;Parent=gene-DOLE_RS05405;Dbxref=Genbank:WP_012174480.1;Name=WP_012174480.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=DOLE_RS05405;product=FAD-dependent oxidoreductase;protein_id=WP_012174480.1;transl_table=11 NC_009943.1 RefSeq gene 1241570 1242133 . + . ID=gene-DOLE_RS05410;Name=DOLE_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05410;old_locus_tag=Dole_1053 NC_009943.1 Protein Homology CDS 1241570 1242133 . + 0 ID=cds-WP_012174481.1;Parent=gene-DOLE_RS05410;Dbxref=Genbank:WP_012174481.1;Name=WP_012174481.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: protein motif:HMM:NF014664.2;locus_tag=DOLE_RS05410;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_012174481.1;transl_table=11 NC_009943.1 RefSeq gene 1242199 1245456 . + . ID=gene-DOLE_RS05415;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=DOLE_RS05415;old_locus_tag=Dole_1054 NC_009943.1 Protein Homology CDS 1242199 1245456 . + 0 ID=cds-WP_012174482.1;Parent=gene-DOLE_RS05415;Dbxref=Genbank:WP_012174482.1;Name=WP_012174482.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR01450.1;locus_tag=DOLE_RS05415;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_012174482.1;transl_table=11 NC_009943.1 RefSeq gene 1245434 1249045 . + . ID=gene-DOLE_RS17080;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=DOLE_RS17080;old_locus_tag=Dole_1055 NC_009943.1 Protein Homology CDS 1245434 1249045 . + 0 ID=cds-WP_012174483.1;Parent=gene-DOLE_RS17080;Dbxref=Genbank:WP_012174483.1;Name=WP_012174483.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR00609.1;locus_tag=DOLE_RS17080;product=exodeoxyribonuclease V subunit beta;protein_id=WP_012174483.1;transl_table=11 NC_009943.1 RefSeq gene 1249047 1250876 . + . ID=gene-DOLE_RS05425;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=DOLE_RS05425;old_locus_tag=Dole_1056 NC_009943.1 Protein Homology CDS 1249047 1250876 . + 0 ID=cds-WP_012174484.1;Parent=gene-DOLE_RS05425;Dbxref=Genbank:WP_012174484.1;Name=WP_012174484.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR01447.1;locus_tag=DOLE_RS05425;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_012174484.1;transl_table=11 NC_009943.1 RefSeq gene 1250892 1251338 . + . ID=gene-DOLE_RS05430;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=DOLE_RS05430;old_locus_tag=Dole_1057 NC_009943.1 Protein Homology CDS 1250892 1251338 . + 0 ID=cds-WP_012174485.1;Parent=gene-DOLE_RS05430;Dbxref=Genbank:WP_012174485.1;Name=WP_012174485.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: protein motif:HMM:NF004051.0;locus_tag=DOLE_RS05430;product=ribose 5-phosphate isomerase B;protein_id=WP_012174485.1;transl_table=11 NC_009943.1 RefSeq gene 1251379 1252050 . - . ID=gene-DOLE_RS05435;Name=DOLE_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05435;old_locus_tag=Dole_1058 NC_009943.1 Protein Homology CDS 1251379 1252050 . - 0 ID=cds-WP_012174486.1;Parent=gene-DOLE_RS05435;Dbxref=Genbank:WP_012174486.1;Name=WP_012174486.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016398.2;locus_tag=DOLE_RS05435;product=chemotaxis protein CheC;protein_id=WP_012174486.1;transl_table=11 NC_009943.1 RefSeq gene 1252043 1252426 . - . ID=gene-DOLE_RS05440;Name=DOLE_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05440;old_locus_tag=Dole_1059 NC_009943.1 Protein Homology CDS 1252043 1252426 . - 0 ID=cds-WP_012174487.1;Parent=gene-DOLE_RS05440;Dbxref=Genbank:WP_012174487.1;Name=WP_012174487.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163069.1;locus_tag=DOLE_RS05440;product=response regulator;protein_id=WP_012174487.1;transl_table=11 NC_009943.1 RefSeq gene 1252647 1253600 . - . ID=gene-DOLE_RS05445;Name=DOLE_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05445;old_locus_tag=Dole_1060 NC_009943.1 Protein Homology CDS 1252647 1253600 . - 0 ID=cds-WP_167320845.1;Parent=gene-DOLE_RS05445;Dbxref=Genbank:WP_167320845.1;Name=WP_167320845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.2;locus_tag=DOLE_RS05445;product=M23 family metallopeptidase;protein_id=WP_167320845.1;transl_table=11 NC_009943.1 RefSeq gene 1253861 1254691 . + . ID=gene-DOLE_RS05450;Name=DOLE_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05450;old_locus_tag=Dole_1061 NC_009943.1 Protein Homology CDS 1253861 1254691 . + 0 ID=cds-WP_012174489.1;Parent=gene-DOLE_RS05450;Dbxref=Genbank:WP_012174489.1;Name=WP_012174489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071152.1;locus_tag=DOLE_RS05450;product=alpha/beta fold hydrolase;protein_id=WP_012174489.1;transl_table=11 NC_009943.1 RefSeq gene 1254678 1257002 . + . ID=gene-DOLE_RS05455;Name=DOLE_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05455;old_locus_tag=Dole_1062 NC_009943.1 GeneMarkS-2+ CDS 1254678 1257002 . + 0 ID=cds-WP_153304364.1;Parent=gene-DOLE_RS05455;Dbxref=Genbank:WP_153304364.1;Name=WP_153304364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05455;product=hypothetical protein;protein_id=WP_153304364.1;transl_table=11 NC_009943.1 RefSeq gene 1257262 1258443 . + . ID=gene-DOLE_RS05460;Name=DOLE_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05460;old_locus_tag=Dole_1063 NC_009943.1 Protein Homology CDS 1257262 1258443 . + 0 ID=cds-WP_012174491.1;Parent=gene-DOLE_RS05460;Dbxref=Genbank:WP_012174491.1;Name=WP_012174491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968807.1;locus_tag=DOLE_RS05460;product=citrate synthase;protein_id=WP_012174491.1;transl_table=11 NC_009943.1 RefSeq gene 1258528 1258899 . + . ID=gene-DOLE_RS18665;Name=DOLE_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18665;old_locus_tag=Dole_1064 NC_009943.1 Protein Homology CDS 1258528 1258899 . + 0 ID=cds-WP_269719151.1;Parent=gene-DOLE_RS18665;Dbxref=Genbank:WP_269719151.1;Name=WP_269719151.1;Ontology_term=GO:0016903;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: protein motif:HMM:NF013707.2;locus_tag=DOLE_RS18665;product=2-oxoacid:acceptor oxidoreductase family protein;protein_id=WP_269719151.1;transl_table=11 NC_009943.1 RefSeq gene 1258797 1260233 . + . ID=gene-DOLE_RS05465;Name=DOLE_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05465;old_locus_tag=Dole_1065 NC_009943.1 Protein Homology CDS 1258797 1260233 . + 0 ID=cds-WP_269719152.1;Parent=gene-DOLE_RS05465;Dbxref=Genbank:WP_269719152.1;Name=WP_269719152.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03710.1;locus_tag=DOLE_RS05465;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_269719152.1;transl_table=11 NC_009943.1 RefSeq gene 1260226 1261083 . + . ID=gene-DOLE_RS05470;Name=DOLE_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05470;old_locus_tag=Dole_1066 NC_009943.1 Protein Homology CDS 1260226 1261083 . + 0 ID=cds-WP_012174493.1;Parent=gene-DOLE_RS05470;Dbxref=Genbank:WP_012174493.1;Name=WP_012174493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020590082.1;locus_tag=DOLE_RS05470;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_012174493.1;transl_table=11 NC_009943.1 RefSeq gene 1261223 1261789 . - . ID=gene-DOLE_RS17085;Name=DOLE_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17085;old_locus_tag=Dole_1067 NC_009943.1 Protein Homology CDS 1261223 1261789 . - 0 ID=cds-WP_052294251.1;Parent=gene-DOLE_RS17085;Dbxref=Genbank:WP_052294251.1;Name=WP_052294251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025343.2;locus_tag=DOLE_RS17085;product=TetR/AcrR family transcriptional regulator;protein_id=WP_052294251.1;transl_table=11 NC_009943.1 RefSeq gene 1261898 1262158 . - . ID=gene-DOLE_RS18150;Name=DOLE_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18150 NC_009943.1 GeneMarkS-2+ CDS 1261898 1262158 . - 0 ID=cds-WP_153304365.1;Parent=gene-DOLE_RS18150;Dbxref=Genbank:WP_153304365.1;Name=WP_153304365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18150;product=hypothetical protein;protein_id=WP_153304365.1;transl_table=11 NC_009943.1 RefSeq gene 1262321 1263436 . + . ID=gene-DOLE_RS05480;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=DOLE_RS05480;old_locus_tag=Dole_1068 NC_009943.1 Protein Homology CDS 1262321 1263436 . + 0 ID=cds-WP_012174495.1;Parent=gene-DOLE_RS05480;Dbxref=Genbank:WP_012174495.1;Name=WP_012174495.1;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610209.1;locus_tag=DOLE_RS05480;product=alanine dehydrogenase;protein_id=WP_012174495.1;transl_table=11 NC_009943.1 RefSeq gene 1263396 1264373 . + . ID=gene-DOLE_RS05485;Name=DOLE_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05485;old_locus_tag=Dole_1069 NC_009943.1 Protein Homology CDS 1263396 1264373 . + 0 ID=cds-WP_167320846.1;Parent=gene-DOLE_RS05485;Dbxref=Genbank:WP_167320846.1;Name=WP_167320846.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016777.2;locus_tag=DOLE_RS05485;product=amidohydrolase family protein;protein_id=WP_167320846.1;transl_table=11 NC_009943.1 RefSeq gene 1264439 1265821 . + . ID=gene-DOLE_RS05490;Name=DOLE_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05490;old_locus_tag=Dole_1070 NC_009943.1 Protein Homology CDS 1264439 1265821 . + 0 ID=cds-WP_012174497.1;Parent=gene-DOLE_RS05490;Dbxref=Genbank:WP_012174497.1;Name=WP_012174497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012428.2;locus_tag=DOLE_RS05490;product=aspartate aminotransferase family protein;protein_id=WP_012174497.1;transl_table=11 NC_009943.1 RefSeq gene 1265851 1267059 . + . ID=gene-DOLE_RS05495;Name=DOLE_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05495;old_locus_tag=Dole_1071 NC_009943.1 Protein Homology CDS 1265851 1267059 . + 0 ID=cds-WP_012174498.1;Parent=gene-DOLE_RS05495;Dbxref=Genbank:WP_012174498.1;Name=WP_012174498.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012428.2;locus_tag=DOLE_RS05495;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_012174498.1;transl_table=11 NC_009943.1 RefSeq gene 1267101 1267739 . + . ID=gene-DOLE_RS17090;Name=DOLE_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17090;old_locus_tag=Dole_1072 NC_009943.1 Protein Homology CDS 1267101 1267739 . + 0 ID=cds-WP_012174499.1;Parent=gene-DOLE_RS17090;Dbxref=Genbank:WP_012174499.1;Name=WP_012174499.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015325.2;locus_tag=DOLE_RS17090;product=flavodoxin family protein;protein_id=WP_012174499.1;transl_table=11 NC_009943.1 RefSeq gene 1267973 1270480 . + . ID=gene-DOLE_RS17095;Name=DOLE_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17095;old_locus_tag=Dole_1073 NC_009943.1 Protein Homology CDS 1267973 1270480 . + 0 ID=cds-WP_012174500.1;Parent=gene-DOLE_RS17095;Dbxref=Genbank:WP_012174500.1;Name=WP_012174500.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=DOLE_RS17095;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012174500.1;transl_table=11 NC_009943.1 RefSeq gene 1270566 1272719 . + . ID=gene-DOLE_RS05510;Name=DOLE_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05510;old_locus_tag=Dole_1074 NC_009943.1 Protein Homology CDS 1270566 1272719 . + 0 ID=cds-WP_012174501.1;Parent=gene-DOLE_RS05510;Dbxref=Genbank:WP_012174501.1;Name=WP_012174501.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=DOLE_RS05510;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012174501.1;transl_table=11 NC_009943.1 RefSeq gene 1272716 1273942 . + . ID=gene-DOLE_RS05515;Name=DOLE_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05515;old_locus_tag=Dole_1075 NC_009943.1 GeneMarkS-2+ CDS 1272716 1273942 . + 0 ID=cds-WP_012174502.1;Parent=gene-DOLE_RS05515;Dbxref=Genbank:WP_012174502.1;Name=WP_012174502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05515;product=hypothetical protein;protein_id=WP_012174502.1;transl_table=11 NC_009943.1 RefSeq gene 1274210 1275622 . + . ID=gene-DOLE_RS05520;Name=DOLE_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05520;old_locus_tag=Dole_1076 NC_009943.1 Protein Homology CDS 1274210 1275622 . + 0 ID=cds-WP_012174503.1;Parent=gene-DOLE_RS05520;Dbxref=Genbank:WP_012174503.1;Name=WP_012174503.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF005899.0;locus_tag=DOLE_RS05520;product=amidase;protein_id=WP_012174503.1;transl_table=11 NC_009943.1 RefSeq gene 1275814 1276119 . - . ID=gene-DOLE_RS05525;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=DOLE_RS05525;old_locus_tag=Dole_1077 NC_009943.1 Protein Homology CDS 1275814 1276119 . - 0 ID=cds-WP_012174504.1;Parent=gene-DOLE_RS05525;Dbxref=Genbank:WP_012174504.1;Name=WP_012174504.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956286.1;locus_tag=DOLE_RS05525;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_012174504.1;transl_table=11 NC_009943.1 RefSeq gene 1276490 1276879 . + . ID=gene-DOLE_RS05530;Name=DOLE_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05530;old_locus_tag=Dole_1078 NC_009943.1 Protein Homology CDS 1276490 1276879 . + 0 ID=cds-WP_012174505.1;Parent=gene-DOLE_RS05530;Dbxref=Genbank:WP_012174505.1;Name=WP_012174505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023390.2;locus_tag=DOLE_RS05530;product=STAS/SEC14 domain-containing protein;protein_id=WP_012174505.1;transl_table=11 NC_009943.1 RefSeq gene 1276911 1277768 . + . ID=gene-DOLE_RS05535;Name=DOLE_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05535 NC_009943.1 Protein Homology CDS 1276911 1277768 . + 0 ID=cds-WP_041280379.1;Parent=gene-DOLE_RS05535;Dbxref=Genbank:WP_041280379.1;Name=WP_041280379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS05535;product=ATP-binding protein;protein_id=WP_041280379.1;transl_table=11 NC_009943.1 RefSeq gene 1277895 1278242 . + . ID=gene-DOLE_RS05540;Name=DOLE_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05540 NC_009943.1 Protein Homology CDS 1277895 1278242 . + 0 ID=cds-WP_041280380.1;Parent=gene-DOLE_RS05540;Dbxref=Genbank:WP_041280380.1;Name=WP_041280380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS05540;product=response regulator;protein_id=WP_041280380.1;transl_table=11 NC_009943.1 RefSeq gene 1278372 1279562 . - . ID=gene-DOLE_RS05545;Name=DOLE_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05545;old_locus_tag=Dole_1081 NC_009943.1 Protein Homology CDS 1278372 1279562 . - 0 ID=cds-WP_012174506.1;Parent=gene-DOLE_RS05545;Dbxref=Genbank:WP_012174506.1;Name=WP_012174506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS05545;product=GGDEF domain-containing protein;protein_id=WP_012174506.1;transl_table=11 NC_009943.1 RefSeq gene 1280137 1281432 . - . ID=gene-DOLE_RS05550;Name=DOLE_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05550;old_locus_tag=Dole_1082 NC_009943.1 Protein Homology CDS 1280137 1281432 . - 0 ID=cds-WP_012174507.1;Parent=gene-DOLE_RS05550;Dbxref=Genbank:WP_012174507.1;Name=WP_012174507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016083.2;locus_tag=DOLE_RS05550;product=DUF401 family protein;protein_id=WP_012174507.1;transl_table=11 NC_009943.1 RefSeq gene 1281469 1282953 . - . ID=gene-DOLE_RS05555;Name=DOLE_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05555;old_locus_tag=Dole_1083 NC_009943.1 Protein Homology CDS 1281469 1282953 . - 0 ID=cds-WP_012174508.1;Parent=gene-DOLE_RS05555;Dbxref=Genbank:WP_012174508.1;Name=WP_012174508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012570.2;locus_tag=DOLE_RS05555;product=dynamin family protein;protein_id=WP_012174508.1;transl_table=11 NC_009943.1 RefSeq gene 1283163 1283996 . + . ID=gene-DOLE_RS05560;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=DOLE_RS05560;old_locus_tag=Dole_1084 NC_009943.1 Protein Homology CDS 1283163 1283996 . + 0 ID=cds-WP_012174509.1;Parent=gene-DOLE_RS05560;Dbxref=Genbank:WP_012174509.1;Name=WP_012174509.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: protein motif:HMM:NF001452.0;locus_tag=DOLE_RS05560;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_012174509.1;transl_table=11 NC_009943.1 RefSeq gene 1284240 1284947 . + . ID=gene-DOLE_RS05565;Name=DOLE_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05565;old_locus_tag=Dole_1085 NC_009943.1 Protein Homology CDS 1284240 1284947 . + 0 ID=cds-WP_012174510.1;Parent=gene-DOLE_RS05565;Dbxref=Genbank:WP_012174510.1;Name=WP_012174510.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=DOLE_RS05565;product=class I SAM-dependent methyltransferase;protein_id=WP_012174510.1;transl_table=11 NC_009943.1 RefSeq gene 1285193 1285966 . + . ID=gene-DOLE_RS05570;Name=DOLE_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05570;old_locus_tag=Dole_1086 NC_009943.1 Protein Homology CDS 1285193 1285966 . + 0 ID=cds-WP_012174511.1;Parent=gene-DOLE_RS05570;Dbxref=Genbank:WP_012174511.1;Name=WP_012174511.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947918.1;locus_tag=DOLE_RS05570;product=enoyl-CoA hydratase-related protein;protein_id=WP_012174511.1;transl_table=11 NC_009943.1 RefSeq gene 1285985 1288411 . - . ID=gene-DOLE_RS05575;Name=DOLE_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05575;old_locus_tag=Dole_1087 NC_009943.1 Protein Homology CDS 1285985 1288411 . - 0 ID=cds-WP_012174512.1;Parent=gene-DOLE_RS05575;Dbxref=Genbank:WP_012174512.1;Name=WP_012174512.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025214.2;locus_tag=DOLE_RS05575;product=tetratricopeptide repeat protein;protein_id=WP_012174512.1;transl_table=11 NC_009943.1 RefSeq gene 1288694 1289710 . - . ID=gene-DOLE_RS05580;Name=DOLE_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05580;old_locus_tag=Dole_1088 NC_009943.1 Protein Homology CDS 1288694 1289710 . - 0 ID=cds-WP_012174513.1;Parent=gene-DOLE_RS05580;Dbxref=Genbank:WP_012174513.1;Name=WP_012174513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=DOLE_RS05580;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_012174513.1;transl_table=11 NC_009943.1 RefSeq gene 1289707 1290216 . - . ID=gene-DOLE_RS05585;Name=DOLE_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05585;old_locus_tag=Dole_1089 NC_009943.1 GeneMarkS-2+ CDS 1289707 1290216 . - 0 ID=cds-WP_012174514.1;Parent=gene-DOLE_RS05585;Dbxref=Genbank:WP_012174514.1;Name=WP_012174514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05585;product=hypothetical protein;protein_id=WP_012174514.1;transl_table=11 NC_009943.1 RefSeq gene 1290213 1292753 . - . ID=gene-DOLE_RS17100;Name=DOLE_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17100;old_locus_tag=Dole_1090 NC_009943.1 Protein Homology CDS 1290213 1292753 . - 0 ID=cds-WP_012174515.1;Parent=gene-DOLE_RS17100;Dbxref=Genbank:WP_012174515.1;Name=WP_012174515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012652.2;locus_tag=DOLE_RS17100;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_012174515.1;transl_table=11 NC_009943.1 RefSeq gene 1292870 1293106 . - . ID=gene-DOLE_RS17105;Name=DOLE_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17105;old_locus_tag=Dole_1091 NC_009943.1 GeneMarkS-2+ CDS 1292870 1293106 . - 0 ID=cds-WP_012174516.1;Parent=gene-DOLE_RS17105;Dbxref=Genbank:WP_012174516.1;Name=WP_012174516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17105;product=hypothetical protein;protein_id=WP_012174516.1;transl_table=11 NC_009943.1 RefSeq gene 1293113 1293439 . - . ID=gene-DOLE_RS18415;Name=DOLE_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18415;old_locus_tag=Dole_1092 NC_009943.1 Protein Homology CDS 1293113 1293439 . - 0 ID=cds-WP_012174517.1;Parent=gene-DOLE_RS18415;Dbxref=Genbank:WP_012174517.1;Name=WP_012174517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS18415;product=response regulator;protein_id=WP_012174517.1;transl_table=11 NC_009943.1 RefSeq gene 1293424 1298511 . - . ID=gene-DOLE_RS17110;Name=DOLE_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17110;old_locus_tag=Dole_1093 NC_009943.1 Protein Homology CDS 1293424 1298511 . - 0 ID=cds-WP_052294253.1;Parent=gene-DOLE_RS17110;Dbxref=Genbank:WP_052294253.1;Name=WP_052294253.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015859.2;locus_tag=DOLE_RS17110;product=PAS domain S-box protein;protein_id=WP_052294253.1;transl_table=11 NC_009943.1 RefSeq gene 1298905 1300686 . - . ID=gene-DOLE_RS05610;Name=DOLE_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05610;old_locus_tag=Dole_1094 NC_009943.1 Protein Homology CDS 1298905 1300686 . - 0 ID=cds-WP_012174519.1;Parent=gene-DOLE_RS05610;Dbxref=Genbank:WP_012174519.1;Name=WP_012174519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967820.1;locus_tag=DOLE_RS05610;product=SLC13 family permease;protein_id=WP_012174519.1;transl_table=11 NC_009943.1 RefSeq gene 1300954 1301718 . + . ID=gene-DOLE_RS05615;Name=DOLE_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05615;old_locus_tag=Dole_1095 NC_009943.1 Protein Homology CDS 1300954 1301718 . + 0 ID=cds-WP_012174520.1;Parent=gene-DOLE_RS05615;Dbxref=Genbank:WP_012174520.1;Name=WP_012174520.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019976.2;locus_tag=DOLE_RS05615;product=nuclease-related domain-containing protein;protein_id=WP_012174520.1;transl_table=11 NC_009943.1 RefSeq gene 1301715 1304903 . + . ID=gene-DOLE_RS05620;Name=DOLE_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05620;old_locus_tag=Dole_1096 NC_009943.1 Protein Homology CDS 1301715 1304903 . + 0 ID=cds-WP_041280381.1;Parent=gene-DOLE_RS05620;Dbxref=Genbank:WP_041280381.1;Name=WP_041280381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=DOLE_RS05620;product=ankyrin repeat domain-containing protein;protein_id=WP_041280381.1;transl_table=11 NC_009943.1 RefSeq gene 1305011 1307236 . - . ID=gene-DOLE_RS05625;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=DOLE_RS05625;old_locus_tag=Dole_1097 NC_009943.1 Protein Homology CDS 1305011 1307236 . - 0 ID=cds-WP_012174522.1;Parent=gene-DOLE_RS05625;Dbxref=Genbank:WP_012174522.1;Name=WP_012174522.1;Ontology_term=GO:0008153,GO:0009396,GO:0046820;gbkey=CDS;gene=pabB;go_function=4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=para-aminobenzoic acid biosynthetic process|0008153||IEA,folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: protein motif:HMM:TIGR00553.1;locus_tag=DOLE_RS05625;product=aminodeoxychorismate synthase component I;protein_id=WP_012174522.1;transl_table=11 NC_009943.1 RefSeq gene 1307241 1307807 . - . ID=gene-DOLE_RS05630;Name=DOLE_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05630;old_locus_tag=Dole_1098 NC_009943.1 Protein Homology CDS 1307241 1307807 . - 0 ID=cds-WP_041280865.1;Parent=gene-DOLE_RS05630;Dbxref=Genbank:WP_041280865.1;Name=WP_041280865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878365.1;locus_tag=DOLE_RS05630;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_041280865.1;transl_table=11 NC_009943.1 RefSeq gene 1307995 1310448 . - . ID=gene-DOLE_RS05635;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=DOLE_RS05635;old_locus_tag=Dole_1099 NC_009943.1 Protein Homology CDS 1307995 1310448 . - 0 ID=cds-WP_012174524.1;Parent=gene-DOLE_RS05635;Dbxref=Genbank:WP_012174524.1;Name=WP_012174524.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174524.1;locus_tag=DOLE_RS05635;product=endopeptidase La;protein_id=WP_012174524.1;transl_table=11 NC_009943.1 RefSeq gene 1310517 1310969 . - . ID=gene-DOLE_RS05640;Name=DOLE_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05640;old_locus_tag=Dole_1100 NC_009943.1 Protein Homology CDS 1310517 1310969 . - 0 ID=cds-WP_012174525.1;Parent=gene-DOLE_RS05640;Dbxref=Genbank:WP_012174525.1;Name=WP_012174525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012241.2;locus_tag=DOLE_RS05640;product=Hsp20/alpha crystallin family protein;protein_id=WP_012174525.1;transl_table=11 NC_009943.1 RefSeq gene 1311170 1312126 . + . ID=gene-DOLE_RS05645;Name=DOLE_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05645;old_locus_tag=Dole_1101 NC_009943.1 GeneMarkS-2+ CDS 1311170 1312126 . + 0 ID=cds-WP_012174526.1;Parent=gene-DOLE_RS05645;Dbxref=Genbank:WP_012174526.1;Name=WP_012174526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05645;product=hypothetical protein;protein_id=WP_012174526.1;transl_table=11 NC_009943.1 RefSeq gene 1312212 1313309 . + . ID=gene-DOLE_RS05650;Name=DOLE_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05650;old_locus_tag=Dole_1102 NC_009943.1 Protein Homology CDS 1312212 1313309 . + 0 ID=cds-WP_012174527.1;Parent=gene-DOLE_RS05650;Dbxref=Genbank:WP_012174527.1;Name=WP_012174527.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013740.2;locus_tag=DOLE_RS05650;product=AI-2E family transporter;protein_id=WP_012174527.1;transl_table=11 NC_009943.1 RefSeq gene 1313895 1314731 . - . ID=gene-DOLE_RS05655;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=DOLE_RS05655;old_locus_tag=Dole_1103 NC_009943.1 Protein Homology CDS 1313895 1314731 . - 0 ID=cds-WP_012174528.1;Parent=gene-DOLE_RS05655;Dbxref=Genbank:WP_012174528.1;Name=WP_012174528.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589697.1;locus_tag=DOLE_RS05655;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_012174528.1;transl_table=11 NC_009943.1 RefSeq gene 1314773 1316146 . - . ID=gene-DOLE_RS05660;Name=DOLE_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05660;old_locus_tag=Dole_1104 NC_009943.1 Protein Homology CDS 1314773 1316146 . - 0 ID=cds-WP_012174529.1;Parent=gene-DOLE_RS05660;Dbxref=Genbank:WP_012174529.1;Name=WP_012174529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016995.2;locus_tag=DOLE_RS05660;product=cytochrome c biogenesis protein ResB;protein_id=WP_012174529.1;transl_table=11 NC_009943.1 RefSeq gene 1316419 1317258 . + . ID=gene-DOLE_RS05665;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=DOLE_RS05665;old_locus_tag=Dole_1105 NC_009943.1 Protein Homology CDS 1316419 1317258 . + 0 ID=cds-WP_012174530.1;Parent=gene-DOLE_RS05665;Dbxref=Genbank:WP_012174530.1;Name=WP_012174530.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878499.1;locus_tag=DOLE_RS05665;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_012174530.1;transl_table=11 NC_009943.1 RefSeq gene 1317678 1318892 . + . ID=gene-DOLE_RS05670;Name=DOLE_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05670;old_locus_tag=Dole_1106 NC_009943.1 Protein Homology CDS 1317678 1318892 . + 0 ID=cds-WP_052294255.1;Parent=gene-DOLE_RS05670;Dbxref=Genbank:WP_052294255.1;Name=WP_052294255.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF018012.2;locus_tag=DOLE_RS05670;product=trimethylamine methyltransferase family protein;protein_id=WP_052294255.1;transl_table=11 NC_009943.1 RefSeq gene 1318937 1320550 . + . ID=gene-DOLE_RS05675;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=DOLE_RS05675;old_locus_tag=Dole_1107 NC_009943.1 Protein Homology CDS 1318937 1320550 . + 0 ID=cds-WP_012174532.1;Parent=gene-DOLE_RS05675;Dbxref=Genbank:WP_012174532.1;Name=WP_012174532.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013164656.1;locus_tag=DOLE_RS05675;product=asparagine synthase B;protein_id=WP_012174532.1;transl_table=11 NC_009943.1 RefSeq gene 1320559 1321407 . + . ID=gene-DOLE_RS05680;Name=DOLE_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05680;old_locus_tag=Dole_1108 NC_009943.1 Protein Homology CDS 1320559 1321407 . + 0 ID=cds-WP_012174533.1;Parent=gene-DOLE_RS05680;Dbxref=Genbank:WP_012174533.1;Name=WP_012174533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024118.2;locus_tag=DOLE_RS05680;product=MBL fold metallo-hydrolase;protein_id=WP_012174533.1;transl_table=11 NC_009943.1 RefSeq gene 1321425 1322657 . + . ID=gene-DOLE_RS05685;Name=DOLE_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05685;old_locus_tag=Dole_1109 NC_009943.1 Protein Homology CDS 1321425 1322657 . + 0 ID=cds-WP_012174534.1;Parent=gene-DOLE_RS05685;Dbxref=Genbank:WP_012174534.1;Name=WP_012174534.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF018012.2;locus_tag=DOLE_RS05685;product=trimethylamine methyltransferase family protein;protein_id=WP_012174534.1;transl_table=11 NC_009943.1 RefSeq gene 1322680 1323306 . + . ID=gene-DOLE_RS05690;Name=DOLE_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05690;old_locus_tag=Dole_1110 NC_009943.1 Protein Homology CDS 1322680 1323306 . + 0 ID=cds-WP_012174535.1;Parent=gene-DOLE_RS05690;Dbxref=Genbank:WP_012174535.1;Name=WP_012174535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663105.1;locus_tag=DOLE_RS05690;product=corrinoid protein;protein_id=WP_012174535.1;transl_table=11 NC_009943.1 RefSeq gene 1323353 1324786 . + . ID=gene-DOLE_RS05695;Name=DOLE_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05695;old_locus_tag=Dole_1111 NC_009943.1 Protein Homology CDS 1323353 1324786 . + 0 ID=cds-WP_012174536.1;Parent=gene-DOLE_RS05695;Dbxref=Genbank:WP_012174536.1;Name=WP_012174536.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF018012.2;locus_tag=DOLE_RS05695;product=trimethylamine methyltransferase family protein;protein_id=WP_012174536.1;transl_table=11 NC_009943.1 RefSeq gene 1324801 1325751 . + . ID=gene-DOLE_RS05700;Name=DOLE_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05700;old_locus_tag=Dole_1112 NC_009943.1 Protein Homology CDS 1324801 1325751 . + 0 ID=cds-WP_012174537.1;Parent=gene-DOLE_RS05700;Dbxref=Genbank:WP_012174537.1;Name=WP_012174537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963547.1;locus_tag=DOLE_RS05700;product=nitrilase;protein_id=WP_012174537.1;transl_table=11 NC_009943.1 RefSeq gene 1325752 1326327 . - . ID=gene-DOLE_RS05705;Name=DOLE_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05705;old_locus_tag=Dole_1113 NC_009943.1 Protein Homology CDS 1325752 1326327 . - 0 ID=cds-WP_012174538.1;Parent=gene-DOLE_RS05705;Dbxref=Genbank:WP_012174538.1;Name=WP_012174538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876248.1;locus_tag=DOLE_RS05705;product=MarR family transcriptional regulator;protein_id=WP_012174538.1;transl_table=11 NC_009943.1 RefSeq gene 1326335 1326640 . - . ID=gene-DOLE_RS05710;Name=DOLE_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05710;old_locus_tag=Dole_1114 NC_009943.1 Protein Homology CDS 1326335 1326640 . - 0 ID=cds-WP_232362728.1;Parent=gene-DOLE_RS05710;Dbxref=Genbank:WP_232362728.1;Name=WP_232362728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405648.1;locus_tag=DOLE_RS05710;product=HNH endonuclease;protein_id=WP_232362728.1;transl_table=11 NC_009943.1 RefSeq gene 1326637 1327476 . - . ID=gene-DOLE_RS05715;Name=DOLE_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05715;old_locus_tag=Dole_1115 NC_009943.1 Protein Homology CDS 1326637 1327476 . - 0 ID=cds-WP_012174540.1;Parent=gene-DOLE_RS05715;Dbxref=Genbank:WP_012174540.1;Name=WP_012174540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020032.2;locus_tag=DOLE_RS05715;product=RimK domain-containing protein ATP-grasp;protein_id=WP_012174540.1;transl_table=11 NC_009943.1 RefSeq gene 1327473 1328384 . - . ID=gene-DOLE_RS05720;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=DOLE_RS05720;old_locus_tag=Dole_1116 NC_009943.1 Protein Homology CDS 1327473 1328384 . - 0 ID=cds-WP_012174541.1;Parent=gene-DOLE_RS05720;Dbxref=Genbank:WP_012174541.1;Name=WP_012174541.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958955.1;locus_tag=DOLE_RS05720;product=GTPase Era;protein_id=WP_012174541.1;transl_table=11 NC_009943.1 RefSeq gene 1328388 1328981 . - . ID=gene-DOLE_RS05725;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=DOLE_RS05725;old_locus_tag=Dole_1117 NC_009943.1 Protein Homology CDS 1328388 1328981 . - 0 ID=cds-WP_012174542.1;Parent=gene-DOLE_RS05725;Dbxref=Genbank:WP_012174542.1;Name=WP_012174542.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174542.1;locus_tag=DOLE_RS05725;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_012174542.1;transl_table=11 NC_009943.1 RefSeq gene 1329017 1329892 . - . ID=gene-DOLE_RS05730;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=DOLE_RS05730;old_locus_tag=Dole_1118 NC_009943.1 Protein Homology CDS 1329017 1329892 . - 0 ID=cds-WP_012174543.1;Parent=gene-DOLE_RS05730;Dbxref=Genbank:WP_012174543.1;Name=WP_012174543.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174543.1;locus_tag=DOLE_RS05730;product=ATP phosphoribosyltransferase;protein_id=WP_012174543.1;transl_table=11 NC_009943.1 RefSeq gene 1329889 1330269 . - . ID=gene-DOLE_RS05735;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=DOLE_RS05735;old_locus_tag=Dole_1119 NC_009943.1 Protein Homology CDS 1329889 1330269 . - 0 ID=cds-WP_012174544.1;Parent=gene-DOLE_RS05735;Dbxref=Genbank:WP_012174544.1;Name=WP_012174544.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174544.1;locus_tag=DOLE_RS05735;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_012174544.1;transl_table=11 NC_009943.1 RefSeq gene 1330447 1331025 . + . ID=gene-DOLE_RS05740;Name=DOLE_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05740;old_locus_tag=Dole_1120 NC_009943.1 GeneMarkS-2+ CDS 1330447 1331025 . + 0 ID=cds-WP_012174545.1;Parent=gene-DOLE_RS05740;Dbxref=Genbank:WP_012174545.1;Name=WP_012174545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05740;product=hypothetical protein;protein_id=WP_012174545.1;transl_table=11 NC_009943.1 RefSeq gene 1331047 1331322 . + . ID=gene-DOLE_RS05745;Name=DOLE_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05745;old_locus_tag=Dole_1121 NC_009943.1 GeneMarkS-2+ CDS 1331047 1331322 . + 0 ID=cds-WP_012174546.1;Parent=gene-DOLE_RS05745;Dbxref=Genbank:WP_012174546.1;Name=WP_012174546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05745;product=hypothetical protein;protein_id=WP_012174546.1;transl_table=11 NC_009943.1 RefSeq gene 1331452 1332750 . + . ID=gene-DOLE_RS05750;Name=DOLE_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05750;old_locus_tag=Dole_1122 NC_009943.1 Protein Homology CDS 1331452 1332750 . + 0 ID=cds-WP_012174547.1;Parent=gene-DOLE_RS05750;Dbxref=Genbank:WP_012174547.1;Name=WP_012174547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=DOLE_RS05750;product=methyl-accepting chemotaxis protein;protein_id=WP_012174547.1;transl_table=11 NC_009943.1 RefSeq gene 1332788 1333861 . + . ID=gene-DOLE_RS17115;Name=DOLE_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17115;old_locus_tag=Dole_1123 NC_009943.1 Protein Homology CDS 1332788 1333861 . + 0 ID=cds-WP_012174548.1;Parent=gene-DOLE_RS17115;Dbxref=Genbank:WP_012174548.1;Name=WP_012174548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174920.1;locus_tag=DOLE_RS17115;product=GGDEF domain-containing protein;protein_id=WP_012174548.1;transl_table=11 NC_009943.1 RefSeq gene 1333981 1335144 . + . ID=gene-DOLE_RS05760;Name=DOLE_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05760;old_locus_tag=Dole_1124 NC_009943.1 Protein Homology CDS 1333981 1335144 . + 0 ID=cds-WP_012174549.1;Parent=gene-DOLE_RS05760;Dbxref=Genbank:WP_012174549.1;Name=WP_012174549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948736.1;locus_tag=DOLE_RS05760;product=HD domain-containing protein;protein_id=WP_012174549.1;transl_table=11 NC_009943.1 RefSeq gene 1335323 1335685 . + . ID=gene-DOLE_RS05765;Name=DOLE_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05765;old_locus_tag=Dole_1125 NC_009943.1 Protein Homology CDS 1335323 1335685 . + 0 ID=cds-WP_012174550.1;Parent=gene-DOLE_RS05765;Dbxref=Genbank:WP_012174550.1;Name=WP_012174550.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF018058.2;locus_tag=DOLE_RS05765;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_012174550.1;transl_table=11 NC_009943.1 RefSeq gene 1335747 1338392 . + . ID=gene-DOLE_RS05770;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=DOLE_RS05770;old_locus_tag=Dole_1126 NC_009943.1 Protein Homology CDS 1335747 1338392 . + 0 ID=cds-WP_012174551.1;Parent=gene-DOLE_RS05770;Dbxref=Genbank:WP_012174551.1;Name=WP_012174551.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174551.1;locus_tag=DOLE_RS05770;product=DNA mismatch repair protein MutS;protein_id=WP_012174551.1;transl_table=11 NC_009943.1 RefSeq gene 1338389 1340392 . + . ID=gene-DOLE_RS05775;Name=DOLE_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05775;old_locus_tag=Dole_1127 NC_009943.1 Protein Homology CDS 1338389 1340392 . + 0 ID=cds-WP_012174552.1;Parent=gene-DOLE_RS05775;Dbxref=Genbank:WP_012174552.1;Name=WP_012174552.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: protein motif:HMM:NF013670.2;locus_tag=DOLE_RS05775;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_012174552.1;transl_table=11 NC_009943.1 RefSeq gene 1340919 1341356 . - . ID=gene-DOLE_RS05780;Name=DOLE_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05780;old_locus_tag=Dole_1128 NC_009943.1 GeneMarkS-2+ CDS 1340919 1341356 . - 0 ID=cds-WP_012174553.1;Parent=gene-DOLE_RS05780;Dbxref=Genbank:WP_012174553.1;Name=WP_012174553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05780;product=hypothetical protein;protein_id=WP_012174553.1;transl_table=11 NC_009943.1 RefSeq gene 1341686 1342459 . - . ID=gene-DOLE_RS05785;Name=DOLE_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05785;old_locus_tag=Dole_1129 NC_009943.1 Protein Homology CDS 1341686 1342459 . - 0 ID=cds-WP_012174554.1;Parent=gene-DOLE_RS05785;Dbxref=Genbank:WP_012174554.1;Name=WP_012174554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610204.1;locus_tag=DOLE_RS05785;product=hypothetical protein;protein_id=WP_012174554.1;transl_table=11 NC_009943.1 RefSeq gene 1342463 1343473 . - . ID=gene-DOLE_RS05790;Name=DOLE_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05790;old_locus_tag=Dole_1130 NC_009943.1 Protein Homology CDS 1342463 1343473 . - 0 ID=cds-WP_012174555.1;Parent=gene-DOLE_RS05790;Dbxref=Genbank:WP_012174555.1;Name=WP_012174555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610205.1;locus_tag=DOLE_RS05790;product=transketolase;protein_id=WP_012174555.1;transl_table=11 NC_009943.1 RefSeq gene 1343510 1344352 . - . ID=gene-DOLE_RS05795;Name=DOLE_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05795;old_locus_tag=Dole_1131 NC_009943.1 Protein Homology CDS 1343510 1344352 . - 0 ID=cds-WP_012174556.1;Parent=gene-DOLE_RS05795;Dbxref=Genbank:WP_012174556.1;Name=WP_012174556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610206.1;locus_tag=DOLE_RS05795;product=transketolase;protein_id=WP_012174556.1;transl_table=11 NC_009943.1 RefSeq gene 1344365 1345615 . - . ID=gene-DOLE_RS05800;Name=DOLE_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05800;old_locus_tag=Dole_1132 NC_009943.1 Protein Homology CDS 1344365 1345615 . - 0 ID=cds-WP_012174557.1;Parent=gene-DOLE_RS05800;Dbxref=Genbank:WP_012174557.1;Name=WP_012174557.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610207.1;locus_tag=DOLE_RS05800;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_012174557.1;transl_table=11 NC_009943.1 RefSeq gene 1345630 1346394 . - . ID=gene-DOLE_RS05805;Name=DOLE_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05805;old_locus_tag=Dole_1133 NC_009943.1 Protein Homology CDS 1345630 1346394 . - 0 ID=cds-WP_012174558.1;Parent=gene-DOLE_RS05805;Dbxref=Genbank:WP_012174558.1;Name=WP_012174558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610208.1;locus_tag=DOLE_RS05805;product=hypothetical protein;protein_id=WP_012174558.1;transl_table=11 NC_009943.1 RefSeq gene 1346467 1347582 . - . ID=gene-DOLE_RS05810;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=DOLE_RS05810;old_locus_tag=Dole_1134 NC_009943.1 Protein Homology CDS 1346467 1347582 . - 0 ID=cds-WP_012174559.1;Parent=gene-DOLE_RS05810;Dbxref=Genbank:WP_012174559.1;Name=WP_012174559.1;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876311.1;locus_tag=DOLE_RS05810;product=alanine dehydrogenase;protein_id=WP_012174559.1;transl_table=11 NC_009943.1 RefSeq gene 1347636 1348256 . - . ID=gene-DOLE_RS05815;Name=DOLE_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05815;old_locus_tag=Dole_1135 NC_009943.1 Protein Homology CDS 1347636 1348256 . - 0 ID=cds-WP_012174560.1;Parent=gene-DOLE_RS05815;Dbxref=Genbank:WP_012174560.1;Name=WP_012174560.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025343.2;locus_tag=DOLE_RS05815;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012174560.1;transl_table=11 NC_009943.1 RefSeq gene 1348590 1349690 . - . ID=gene-DOLE_RS05820;Name=DOLE_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05820;old_locus_tag=Dole_1136 NC_009943.1 Protein Homology CDS 1348590 1349690 . - 0 ID=cds-WP_232362729.1;Parent=gene-DOLE_RS05820;Dbxref=Genbank:WP_232362729.1;Name=WP_232362729.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968655.1;locus_tag=DOLE_RS05820;product=response regulator;protein_id=WP_232362729.1;transl_table=11 NC_009943.1 RefSeq gene 1349687 1350625 . - . ID=gene-DOLE_RS05825;Name=DOLE_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05825 NC_009943.1 Protein Homology CDS 1349687 1350625 . - 0 ID=cds-WP_167320847.1;Parent=gene-DOLE_RS05825;Dbxref=Genbank:WP_167320847.1;Name=WP_167320847.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS05825;product=ATP-binding protein;protein_id=WP_167320847.1;transl_table=11 NC_009943.1 RefSeq gene 1350597 1352372 . - . ID=gene-DOLE_RS17120;Name=DOLE_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17120;old_locus_tag=Dole_1137 NC_009943.1 Protein Homology CDS 1350597 1352372 . - 0 ID=cds-WP_052294257.1;Parent=gene-DOLE_RS17120;Dbxref=Genbank:WP_052294257.1;Name=WP_052294257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964335.1;locus_tag=DOLE_RS17120;product=PAS domain S-box protein;protein_id=WP_052294257.1;transl_table=11 NC_009943.1 RefSeq gene 1352718 1353755 . - . ID=gene-DOLE_RS17125;Name=DOLE_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17125;old_locus_tag=Dole_1138 NC_009943.1 Protein Homology CDS 1352718 1353755 . - 0 ID=cds-WP_012174562.1;Parent=gene-DOLE_RS17125;Dbxref=Genbank:WP_012174562.1;Name=WP_012174562.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174548.1;locus_tag=DOLE_RS17125;product=diguanylate cyclase;protein_id=WP_012174562.1;transl_table=11 NC_009943.1 RefSeq gene 1353986 1355224 . + . ID=gene-DOLE_RS05840;Name=DOLE_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05840;old_locus_tag=Dole_1139 NC_009943.1 Protein Homology CDS 1353986 1355224 . + 0 ID=cds-WP_041280383.1;Parent=gene-DOLE_RS05840;Dbxref=Genbank:WP_041280383.1;Name=WP_041280383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947599.1;locus_tag=DOLE_RS05840;product=iron-containing alcohol dehydrogenase;protein_id=WP_041280383.1;transl_table=11 NC_009943.1 RefSeq gene 1355430 1355990 . - . ID=gene-DOLE_RS05845;Name=DOLE_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05845;old_locus_tag=Dole_1140 NC_009943.1 Protein Homology CDS 1355430 1355990 . - 0 ID=cds-WP_041280384.1;Parent=gene-DOLE_RS05845;Dbxref=Genbank:WP_041280384.1;Name=WP_041280384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173501.1;locus_tag=DOLE_RS05845;product=hypothetical protein;protein_id=WP_041280384.1;transl_table=11 NC_009943.1 RefSeq gene 1356417 1358132 . + . ID=gene-DOLE_RS05850;Name=DOLE_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05850;old_locus_tag=Dole_1141 NC_009943.1 Protein Homology CDS 1356417 1358132 . + 0 ID=cds-WP_041280385.1;Parent=gene-DOLE_RS05850;Dbxref=Genbank:WP_041280385.1;Name=WP_041280385.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012363.2;locus_tag=DOLE_RS05850;product=carboxylesterase/lipase family protein;protein_id=WP_041280385.1;transl_table=11 NC_009943.1 RefSeq gene 1358206 1359225 . + . ID=gene-DOLE_RS05855;Name=DOLE_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05855;old_locus_tag=Dole_1142 NC_009943.1 GeneMarkS-2+ CDS 1358206 1359225 . + 0 ID=cds-WP_012174566.1;Parent=gene-DOLE_RS05855;Dbxref=Genbank:WP_012174566.1;Name=WP_012174566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05855;product=hypothetical protein;protein_id=WP_012174566.1;transl_table=11 NC_009943.1 RefSeq gene 1359486 1360346 . + . ID=gene-DOLE_RS05860;Name=DOLE_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05860;old_locus_tag=Dole_1143 NC_009943.1 Protein Homology CDS 1359486 1360346 . + 0 ID=cds-WP_041280386.1;Parent=gene-DOLE_RS05860;Dbxref=Genbank:WP_041280386.1;Name=WP_041280386.1;Ontology_term=GO:0006457,GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:NF015252.2;locus_tag=DOLE_RS05860;product=lipase secretion chaperone;protein_id=WP_041280386.1;transl_table=11 NC_009943.1 RefSeq gene 1360361 1361440 . + . ID=gene-DOLE_RS05865;Name=DOLE_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05865;old_locus_tag=Dole_1144 NC_009943.1 Protein Homology CDS 1360361 1361440 . + 0 ID=cds-WP_012174568.1;Parent=gene-DOLE_RS05865;Dbxref=Genbank:WP_012174568.1;Name=WP_012174568.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.2;locus_tag=DOLE_RS05865;product=alpha/beta fold hydrolase;protein_id=WP_012174568.1;transl_table=11 NC_009943.1 RefSeq gene 1361486 1363693 . + . ID=gene-DOLE_RS05870;Name=DOLE_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05870;old_locus_tag=Dole_1145 NC_009943.1 Protein Homology CDS 1361486 1363693 . + 0 ID=cds-WP_167320849.1;Parent=gene-DOLE_RS05870;Dbxref=Genbank:WP_167320849.1;Name=WP_167320849.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013239.2;locus_tag=DOLE_RS05870;product=glycoside hydrolase family 31 protein;protein_id=WP_167320849.1;transl_table=11 NC_009943.1 RefSeq gene 1363894 1364514 . + . ID=gene-DOLE_RS05875;Name=DOLE_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05875;old_locus_tag=Dole_1146 NC_009943.1 Protein Homology CDS 1363894 1364514 . + 0 ID=cds-WP_012174570.1;Parent=gene-DOLE_RS05875;Dbxref=Genbank:WP_012174570.1;Name=WP_012174570.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012624.2;locus_tag=DOLE_RS05875;product=nucleoside monophosphate kinase;protein_id=WP_012174570.1;transl_table=11 NC_009943.1 RefSeq gene 1364536 1365606 . - . ID=gene-DOLE_RS05880;Name=DOLE_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05880;old_locus_tag=Dole_1147 NC_009943.1 Protein Homology CDS 1364536 1365606 . - 0 ID=cds-WP_167320850.1;Parent=gene-DOLE_RS05880;Dbxref=Genbank:WP_167320850.1;Name=WP_167320850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=DOLE_RS05880;product=M48 family metallopeptidase;protein_id=WP_167320850.1;transl_table=11 NC_009943.1 RefSeq gene 1365638 1366906 . - . ID=gene-DOLE_RS05885;Name=DOLE_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05885;old_locus_tag=Dole_1148 NC_009943.1 Protein Homology CDS 1365638 1366906 . - 0 ID=cds-WP_012174572.1;Parent=gene-DOLE_RS05885;Dbxref=Genbank:WP_012174572.1;Name=WP_012174572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017770.2;locus_tag=DOLE_RS05885;product=DUF898 family protein;protein_id=WP_012174572.1;transl_table=11 NC_009943.1 RefSeq gene 1366976 1367368 . - . ID=gene-DOLE_RS05890;Name=DOLE_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05890;old_locus_tag=Dole_1149 NC_009943.1 Protein Homology CDS 1366976 1367368 . - 0 ID=cds-WP_012174573.1;Parent=gene-DOLE_RS05890;Dbxref=Genbank:WP_012174573.1;Name=WP_012174573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948011.1;locus_tag=DOLE_RS05890;product=response regulator;protein_id=WP_012174573.1;transl_table=11 NC_009943.1 RefSeq gene 1367376 1368470 . - . ID=gene-DOLE_RS05895;Name=DOLE_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05895;old_locus_tag=Dole_1150 NC_009943.1 Protein Homology CDS 1367376 1368470 . - 0 ID=cds-WP_012174574.1;Parent=gene-DOLE_RS05895;Dbxref=Genbank:WP_012174574.1;Name=WP_012174574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949673.1;locus_tag=DOLE_RS05895;product=Coenzyme F420 hydrogenase/dehydrogenase%2C beta subunit C-terminal domain;protein_id=WP_012174574.1;transl_table=11 NC_009943.1 RefSeq gene 1368486 1369415 . - . ID=gene-DOLE_RS05900;Name=DOLE_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05900;old_locus_tag=Dole_1151 NC_009943.1 Protein Homology CDS 1368486 1369415 . - 0 ID=cds-WP_012174575.1;Parent=gene-DOLE_RS05900;Dbxref=Genbank:WP_012174575.1;Name=WP_012174575.1;Ontology_term=GO:0006555,GO:0004489;gbkey=CDS;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968253.1;locus_tag=DOLE_RS05900;product=methylenetetrahydrofolate reductase;protein_id=WP_012174575.1;transl_table=11 NC_009943.1 RefSeq gene 1369412 1370080 . - . ID=gene-DOLE_RS05905;Name=DOLE_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05905;old_locus_tag=Dole_1152 NC_009943.1 Protein Homology CDS 1369412 1370080 . - 0 ID=cds-WP_012174576.1;Parent=gene-DOLE_RS05905;Dbxref=Genbank:WP_012174576.1;Name=WP_012174576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968254.1;locus_tag=DOLE_RS05905;product=methylenetetrahydrofolate reductase C-terminal domain-containing protein;protein_id=WP_012174576.1;transl_table=11 NC_009943.1 RefSeq gene 1370216 1370665 . - . ID=gene-DOLE_RS05910;Name=DOLE_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05910;old_locus_tag=Dole_1153 NC_009943.1 GeneMarkS-2+ CDS 1370216 1370665 . - 0 ID=cds-WP_041280387.1;Parent=gene-DOLE_RS05910;Dbxref=Genbank:WP_041280387.1;Name=WP_041280387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05910;product=hypothetical protein;protein_id=WP_041280387.1;transl_table=11 NC_009943.1 RefSeq gene 1370970 1372292 . - . ID=gene-DOLE_RS05915;Name=DOLE_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05915;old_locus_tag=Dole_1154 NC_009943.1 Protein Homology CDS 1370970 1372292 . - 0 ID=cds-WP_012174578.1;Parent=gene-DOLE_RS05915;Dbxref=Genbank:WP_012174578.1;Name=WP_012174578.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=DOLE_RS05915;product=ankyrin repeat domain-containing protein;protein_id=WP_012174578.1;transl_table=11 NC_009943.1 RefSeq gene 1372445 1372933 . - . ID=gene-DOLE_RS05920;Name=DOLE_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05920;old_locus_tag=Dole_1155 NC_009943.1 GeneMarkS-2+ CDS 1372445 1372933 . - 0 ID=cds-WP_012174579.1;Parent=gene-DOLE_RS05920;Dbxref=Genbank:WP_012174579.1;Name=WP_012174579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05920;product=hypothetical protein;protein_id=WP_012174579.1;transl_table=11 NC_009943.1 RefSeq gene 1372947 1381832 . - . ID=gene-DOLE_RS05925;Name=DOLE_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05925;old_locus_tag=Dole_1156 NC_009943.1 Protein Homology CDS 1372947 1381832 . - 0 ID=cds-WP_012174580.1;Parent=gene-DOLE_RS05925;Dbxref=Genbank:WP_012174580.1;Name=WP_012174580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174270.1;locus_tag=DOLE_RS05925;product=sugar-binding protein;protein_id=WP_012174580.1;transl_table=11 NC_009943.1 RefSeq gene 1382013 1382513 . - . ID=gene-DOLE_RS18420;Name=DOLE_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18420 NC_009943.1 Protein Homology CDS 1382013 1382513 . - 0 ID=cds-WP_167320851.1;Parent=gene-DOLE_RS18420;Dbxref=Genbank:WP_167320851.1;Name=WP_167320851.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014692.2;locus_tag=DOLE_RS18420;product=hydrogenase iron-sulfur subunit;protein_id=WP_167320851.1;transl_except=(pos:complement(1382244..1382246)%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 1382547 1385555 . - . ID=gene-DOLE_RS05935;Name=DOLE_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05935;old_locus_tag=Dole_1159 NC_009943.1 Protein Homology CDS 1382547 1385555 . - 0 ID=cds-WP_012174583.1;Parent=gene-DOLE_RS05935;Dbxref=Genbank:WP_012174583.1;Name=WP_012174583.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877964.1;locus_tag=DOLE_RS05935;product=FAD-dependent oxidoreductase;protein_id=WP_012174583.1;transl_table=11 NC_009943.1 RefSeq gene 1385539 1386426 . - . ID=gene-DOLE_RS05940;Name=DOLE_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05940;old_locus_tag=Dole_1160 NC_009943.1 Protein Homology CDS 1385539 1386426 . - 0 ID=cds-WP_012174584.1;Parent=gene-DOLE_RS05940;Dbxref=Genbank:WP_012174584.1;Name=WP_012174584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877963.1;locus_tag=DOLE_RS05940;product=CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein;protein_id=WP_012174584.1;transl_table=11 NC_009943.1 RefSeq gene 1386682 1387293 . - . ID=gene-DOLE_RS05945;Name=DOLE_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05945;old_locus_tag=Dole_1161 NC_009943.1 Protein Homology CDS 1386682 1387293 . - 0 ID=cds-WP_012174585.1;Parent=gene-DOLE_RS05945;Dbxref=Genbank:WP_012174585.1;Name=WP_012174585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877962.1;locus_tag=DOLE_RS05945;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012174585.1;transl_table=11 NC_009943.1 RefSeq gene 1387468 1387614 . - . ID=gene-DOLE_RS18155;Name=DOLE_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18155 NC_009943.1 GeneMarkS-2+ CDS 1387468 1387614 . - 0 ID=cds-WP_153304366.1;Parent=gene-DOLE_RS18155;Dbxref=Genbank:WP_153304366.1;Name=WP_153304366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18155;product=hypothetical protein;protein_id=WP_153304366.1;transl_table=11 NC_009943.1 RefSeq gene 1387709 1388611 . + . ID=gene-DOLE_RS05950;Name=DOLE_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05950;old_locus_tag=Dole_1162 NC_009943.1 Protein Homology CDS 1387709 1388611 . + 0 ID=cds-WP_012174586.1;Parent=gene-DOLE_RS05950;Dbxref=Genbank:WP_012174586.1;Name=WP_012174586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905034.1;locus_tag=DOLE_RS05950;product=acyltransferase;protein_id=WP_012174586.1;transl_table=11 NC_009943.1 RefSeq gene 1389233 1389991 . + . ID=gene-DOLE_RS05955;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=DOLE_RS05955;old_locus_tag=Dole_1163 NC_009943.1 Protein Homology CDS 1389233 1389991 . + 0 ID=cds-WP_012174587.1;Parent=gene-DOLE_RS05955;Dbxref=Genbank:WP_012174587.1;Name=WP_012174587.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: protein motif:HMM:NF001490.0;locus_tag=DOLE_RS05955;product=5'/3'-nucleotidase SurE;protein_id=WP_012174587.1;transl_table=11 NC_009943.1 RefSeq gene 1390005 1390967 . + . ID=gene-DOLE_RS05960;Name=DOLE_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05960;old_locus_tag=Dole_1164 NC_009943.1 Protein Homology CDS 1390005 1390967 . + 0 ID=cds-WP_012174588.1;Parent=gene-DOLE_RS05960;Dbxref=Genbank:WP_012174588.1;Name=WP_012174588.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DOLE_RS05960;product=HD domain-containing protein;protein_id=WP_012174588.1;transl_table=11 NC_009943.1 RefSeq gene 1390967 1391611 . + . ID=gene-DOLE_RS05965;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=DOLE_RS05965;old_locus_tag=Dole_1165 NC_009943.1 Protein Homology CDS 1390967 1391611 . + 0 ID=cds-WP_012174589.1;Parent=gene-DOLE_RS05965;Dbxref=Genbank:WP_012174589.1;Name=WP_012174589.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174589.1;locus_tag=DOLE_RS05965;product=dTMP kinase;protein_id=WP_012174589.1;transl_table=11 NC_009943.1 RefSeq gene 1391756 1394071 . + . ID=gene-DOLE_RS05970;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=DOLE_RS05970;old_locus_tag=Dole_1166 NC_009943.1 Protein Homology CDS 1391756 1394071 . + 0 ID=cds-WP_012174590.1;Parent=gene-DOLE_RS05970;Dbxref=Genbank:WP_012174590.1;Name=WP_012174590.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073689.1;locus_tag=DOLE_RS05970;product=cysteine--tRNA ligase;protein_id=WP_012174590.1;transl_table=11 NC_009943.1 RefSeq gene 1394081 1395088 . + . ID=gene-DOLE_RS05975;Name=DOLE_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05975;old_locus_tag=Dole_1167 NC_009943.1 GeneMarkS-2+ CDS 1394081 1395088 . + 0 ID=cds-WP_012174591.1;Parent=gene-DOLE_RS05975;Dbxref=Genbank:WP_012174591.1;Name=WP_012174591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS05975;product=hypothetical protein;protein_id=WP_012174591.1;transl_table=11 NC_009943.1 RefSeq gene 1395242 1395430 . + . ID=gene-DOLE_RS05980;Name=DOLE_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05980;old_locus_tag=Dole_1168 NC_009943.1 Protein Homology CDS 1395242 1395430 . + 0 ID=cds-WP_012174592.1;Parent=gene-DOLE_RS05980;Dbxref=Genbank:WP_012174592.1;Name=WP_012174592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404875.1;locus_tag=DOLE_RS05980;product=4Fe-4S binding protein;protein_id=WP_012174592.1;transl_table=11 NC_009943.1 RefSeq gene 1395578 1396852 . + . ID=gene-DOLE_RS05985;Name=DOLE_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS05985;old_locus_tag=Dole_1169 NC_009943.1 Protein Homology CDS 1395578 1396852 . + 0 ID=cds-WP_012174593.1;Parent=gene-DOLE_RS05985;Dbxref=Genbank:WP_012174593.1;Name=WP_012174593.1;Ontology_term=GO:0050043;gbkey=CDS;go_function=lactate racemase activity|0050043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949104.1;locus_tag=DOLE_RS05985;product=lactate racemase domain-containing protein;protein_id=WP_012174593.1;transl_table=11 NC_009943.1 RefSeq gene 1397203 1397757 . + . ID=gene-DOLE_RS17130;Name=DOLE_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17130;old_locus_tag=Dole_1170 NC_009943.1 Protein Homology CDS 1397203 1397757 . + 0 ID=cds-WP_012174594.1;Parent=gene-DOLE_RS17130;Dbxref=Genbank:WP_012174594.1;Name=WP_012174594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00589.1;locus_tag=DOLE_RS17130;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_012174594.1;transl_table=11 NC_009943.1 RefSeq gene 1397843 1401241 . + . ID=gene-DOLE_RS06000;Name=DOLE_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06000;old_locus_tag=Dole_1171 NC_009943.1 Protein Homology CDS 1397843 1401241 . + 0 ID=cds-WP_012174595.1;Parent=gene-DOLE_RS06000;Dbxref=Genbank:WP_012174595.1;Name=WP_012174595.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF024642.2;locus_tag=DOLE_RS06000;product=UvrD-helicase domain-containing protein;protein_id=WP_012174595.1;transl_table=11 NC_009943.1 RefSeq gene 1401518 1401877 . + . ID=gene-DOLE_RS06005;Name=DOLE_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06005;old_locus_tag=Dole_1172 NC_009943.1 GeneMarkS-2+ CDS 1401518 1401877 . + 0 ID=cds-WP_167320852.1;Parent=gene-DOLE_RS06005;Dbxref=Genbank:WP_167320852.1;Name=WP_167320852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06005;product=hypothetical protein;protein_id=WP_167320852.1;transl_table=11 NC_009943.1 RefSeq gene 1401956 1402543 . + . ID=gene-DOLE_RS06010;Name=DOLE_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06010;old_locus_tag=Dole_1173 NC_009943.1 Protein Homology CDS 1401956 1402543 . + 0 ID=cds-WP_012174597.1;Parent=gene-DOLE_RS06010;Dbxref=Genbank:WP_012174597.1;Name=WP_012174597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963422.1;locus_tag=DOLE_RS06010;product=lytic transglycosylase domain-containing protein;protein_id=WP_012174597.1;transl_table=11 NC_009943.1 RefSeq gene 1402723 1403544 . + . ID=gene-DOLE_RS06015;Name=DOLE_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06015;old_locus_tag=Dole_1174 NC_009943.1 Protein Homology CDS 1402723 1403544 . + 0 ID=cds-WP_012174598.1;Parent=gene-DOLE_RS06015;Dbxref=Genbank:WP_012174598.1;Name=WP_012174598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174598.1;locus_tag=DOLE_RS06015;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_012174598.1;transl_table=11 NC_009943.1 RefSeq gene 1403654 1404997 . + . ID=gene-DOLE_RS06020;Name=DOLE_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06020;old_locus_tag=Dole_1175 NC_009943.1 Protein Homology CDS 1403654 1404997 . + 0 ID=cds-WP_012174599.1;Parent=gene-DOLE_RS06020;Dbxref=Genbank:WP_012174599.1;Name=WP_012174599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905848.1;locus_tag=DOLE_RS06020;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_012174599.1;transl_table=11 NC_009943.1 RefSeq gene 1405091 1405468 . + . ID=gene-DOLE_RS06025;Name=DOLE_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06025;old_locus_tag=Dole_1176 NC_009943.1 Protein Homology CDS 1405091 1405468 . + 0 ID=cds-WP_041280390.1;Parent=gene-DOLE_RS06025;Dbxref=Genbank:WP_041280390.1;Name=WP_041280390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403558.1;locus_tag=DOLE_RS06025;product=RidA family protein;protein_id=WP_041280390.1;transl_table=11 NC_009943.1 RefSeq gene 1405500 1406123 . + . ID=gene-DOLE_RS06030;Name=DOLE_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06030;old_locus_tag=Dole_1177 NC_009943.1 Protein Homology CDS 1405500 1406123 . + 0 ID=cds-WP_012174601.1;Parent=gene-DOLE_RS06030;Dbxref=Genbank:WP_012174601.1;Name=WP_012174601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904177.1;locus_tag=DOLE_RS06030;product=Maf family protein;protein_id=WP_012174601.1;transl_table=11 NC_009943.1 RefSeq gene 1406139 1407458 . + . ID=gene-DOLE_RS06035;Name=DOLE_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06035;old_locus_tag=Dole_1178 NC_009943.1 Protein Homology CDS 1406139 1407458 . + 0 ID=cds-WP_012174602.1;Parent=gene-DOLE_RS06035;Dbxref=Genbank:WP_012174602.1;Name=WP_012174602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS06035;product=radical SAM protein;protein_id=WP_012174602.1;transl_table=11 NC_009943.1 RefSeq gene 1407506 1408189 . + . ID=gene-DOLE_RS06040;Name=DOLE_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06040;old_locus_tag=Dole_1179 NC_009943.1 Protein Homology CDS 1407506 1408189 . + 0 ID=cds-WP_012174603.1;Parent=gene-DOLE_RS06040;Dbxref=Genbank:WP_012174603.1;Name=WP_012174603.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073428.1;locus_tag=DOLE_RS06040;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_012174603.1;transl_table=11 NC_009943.1 RefSeq gene 1408186 1408719 . + . ID=gene-DOLE_RS06045;Name=DOLE_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06045;old_locus_tag=Dole_1180 NC_009943.1 Protein Homology CDS 1408186 1408719 . + 0 ID=cds-WP_012174604.1;Parent=gene-DOLE_RS06045;Dbxref=Genbank:WP_012174604.1;Name=WP_012174604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609542.1;locus_tag=DOLE_RS06045;product=epoxyqueuosine reductase QueH;protein_id=WP_012174604.1;transl_table=11 NC_009943.1 RefSeq gene 1408731 1409216 . - . ID=gene-DOLE_RS06050;Name=DOLE_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06050;old_locus_tag=Dole_1181 NC_009943.1 Protein Homology CDS 1408731 1409216 . - 0 ID=cds-WP_012174605.1;Parent=gene-DOLE_RS06050;Dbxref=Genbank:WP_012174605.1;Name=WP_012174605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016213.2;locus_tag=DOLE_RS06050;product=DUF456 domain-containing protein;protein_id=WP_012174605.1;transl_table=11 NC_009943.1 RefSeq gene 1409226 1410194 . - . ID=gene-DOLE_RS06055;Name=DOLE_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06055;old_locus_tag=Dole_1182 NC_009943.1 Protein Homology CDS 1409226 1410194 . - 0 ID=cds-WP_012174606.1;Parent=gene-DOLE_RS06055;Dbxref=Genbank:WP_012174606.1;Name=WP_012174606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609921.1;locus_tag=DOLE_RS06055;product=nitronate monooxygenase;protein_id=WP_012174606.1;transl_table=11 NC_009943.1 RefSeq gene 1410191 1410724 . - . ID=gene-DOLE_RS06060;Name=DOLE_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06060;old_locus_tag=Dole_1183 NC_009943.1 GeneMarkS-2+ CDS 1410191 1410724 . - 0 ID=cds-WP_012174607.1;Parent=gene-DOLE_RS06060;Dbxref=Genbank:WP_012174607.1;Name=WP_012174607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06060;product=hypothetical protein;protein_id=WP_012174607.1;transl_table=11 NC_009943.1 RefSeq gene 1411008 1411478 . + . ID=gene-DOLE_RS06065;Name=DOLE_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06065;old_locus_tag=Dole_1184 NC_009943.1 Protein Homology CDS 1411008 1411478 . + 0 ID=cds-WP_012174608.1;Parent=gene-DOLE_RS06065;Dbxref=Genbank:WP_012174608.1;Name=WP_012174608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906047.1;locus_tag=DOLE_RS06065;product=HAD hydrolase family protein;protein_id=WP_012174608.1;transl_table=11 NC_009943.1 RefSeq gene 1411949 1413013 . + . ID=gene-DOLE_RS18160;Name=DOLE_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18160;old_locus_tag=Dole_1185 NC_009943.1 GeneMarkS-2+ CDS 1411949 1413013 . + 0 ID=cds-WP_153304367.1;Parent=gene-DOLE_RS18160;Dbxref=Genbank:WP_153304367.1;Name=WP_153304367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18160;product=hypothetical protein;protein_id=WP_153304367.1;transl_table=11 NC_009943.1 RefSeq gene 1413010 1416603 . + . ID=gene-DOLE_RS06075;Name=DOLE_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06075;old_locus_tag=Dole_1186 NC_009943.1 Protein Homology CDS 1413010 1416603 . + 0 ID=cds-WP_012174610.1;Parent=gene-DOLE_RS06075;Dbxref=Genbank:WP_012174610.1;Name=WP_012174610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS06075;product=tetratricopeptide repeat protein;protein_id=WP_012174610.1;transl_table=11 NC_009943.1 RefSeq gene 1416951 1417406 . - . ID=gene-DOLE_RS06080;Name=cas8a1;gbkey=Gene;gene=cas8a1;gene_biotype=protein_coding;locus_tag=DOLE_RS06080;old_locus_tag=Dole_1187 NC_009943.1 Protein Homology CDS 1416951 1417406 . - 0 ID=cds-WP_012174611.1;Parent=gene-DOLE_RS06080;Dbxref=Genbank:WP_012174611.1;Name=WP_012174611.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas8a1;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01908.1;locus_tag=DOLE_RS06080;product=type I-B CRISPR-associated protein Cas8b1/Cst1;protein_id=WP_012174611.1;transl_table=11 NC_009943.1 RefSeq gene 1417465 1418910 . - . ID=gene-DOLE_RS06085;Name=DOLE_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06085;old_locus_tag=Dole_1188 NC_009943.1 Protein Homology CDS 1417465 1418910 . - 0 ID=cds-WP_012174612.1;Parent=gene-DOLE_RS06085;Dbxref=Genbank:WP_012174612.1;Name=WP_012174612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017911.2;locus_tag=DOLE_RS06085;product=DNA polymerase III delta;protein_id=WP_012174612.1;transl_table=11 NC_009943.1 RefSeq gene 1418910 1419686 . - . ID=gene-DOLE_RS06090;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=DOLE_RS06090;old_locus_tag=Dole_1189 NC_009943.1 Protein Homology CDS 1418910 1419686 . - 0 ID=cds-WP_012174613.1;Parent=gene-DOLE_RS06090;Dbxref=Genbank:WP_012174613.1;Name=WP_012174613.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: protein motif:HMM:TIGR00544.1;locus_tag=DOLE_RS06090;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_012174613.1;transl_table=11 NC_009943.1 RefSeq gene 1419691 1420173 . - . ID=gene-DOLE_RS06095;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=DOLE_RS06095;old_locus_tag=Dole_1190 NC_009943.1 Protein Homology CDS 1419691 1420173 . - 0 ID=cds-WP_012174614.1;Parent=gene-DOLE_RS06095;Dbxref=Genbank:WP_012174614.1;Name=WP_012174614.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588127.1;locus_tag=DOLE_RS06095;product=signal peptidase II;protein_id=WP_012174614.1;transl_table=11 NC_009943.1 RefSeq gene 1420200 1422989 . - . ID=gene-DOLE_RS06100;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=DOLE_RS06100;old_locus_tag=Dole_1191 NC_009943.1 Protein Homology CDS 1420200 1422989 . - 0 ID=cds-WP_012174615.1;Parent=gene-DOLE_RS06100;Dbxref=Genbank:WP_012174615.1;Name=WP_012174615.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875053.1;locus_tag=DOLE_RS06100;product=isoleucine--tRNA ligase;protein_id=WP_012174615.1;transl_table=11 NC_009943.1 RefSeq gene 1423104 1423844 . - . ID=gene-DOLE_RS06105;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=DOLE_RS06105;old_locus_tag=Dole_1192 NC_009943.1 Protein Homology CDS 1423104 1423844 . - 0 ID=cds-WP_012174616.1;Parent=gene-DOLE_RS06105;Dbxref=Genbank:WP_012174616.1;Name=WP_012174616.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: protein motif:HMM:NF014575.2;locus_tag=DOLE_RS06105;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_012174616.1;transl_table=11 NC_009943.1 RefSeq gene 1423846 1425717 . - . ID=gene-DOLE_RS06110;Name=DOLE_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06110;old_locus_tag=Dole_1193 NC_009943.1 Protein Homology CDS 1423846 1425717 . - 0 ID=cds-WP_012174617.1;Parent=gene-DOLE_RS06110;Dbxref=Genbank:WP_012174617.1;Name=WP_012174617.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875292.1;locus_tag=DOLE_RS06110;product=GNAT family N-acetyltransferase;protein_id=WP_012174617.1;transl_table=11 NC_009943.1 RefSeq gene 1426056 1427171 . + . ID=gene-DOLE_RS06115;Name=DOLE_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06115;old_locus_tag=Dole_1194 NC_009943.1 Protein Homology CDS 1426056 1427171 . + 0 ID=cds-WP_012174618.1;Parent=gene-DOLE_RS06115;Dbxref=Genbank:WP_012174618.1;Name=WP_012174618.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018805.2;locus_tag=DOLE_RS06115;product=carotenoid 1%2C2-hydratase;protein_id=WP_012174618.1;transl_table=11 NC_009943.1 RefSeq gene 1427702 1428649 . - . ID=gene-DOLE_RS17135;Name=DOLE_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17135;old_locus_tag=Dole_1195 NC_009943.1 Protein Homology CDS 1427702 1428649 . - 0 ID=cds-WP_012174619.1;Parent=gene-DOLE_RS17135;Dbxref=Genbank:WP_012174619.1;Name=WP_012174619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015724.2;locus_tag=DOLE_RS17135;product=hypothetical protein;protein_id=WP_012174619.1;transl_table=11 NC_009943.1 RefSeq gene 1428698 1430047 . - . ID=gene-DOLE_RS06125;Name=DOLE_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06125;old_locus_tag=Dole_1196 NC_009943.1 Protein Homology CDS 1428698 1430047 . - 0 ID=cds-WP_012174620.1;Parent=gene-DOLE_RS06125;Dbxref=Genbank:WP_012174620.1;Name=WP_012174620.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017459.2;locus_tag=DOLE_RS06125;product=DUF799 family lipoprotein;protein_id=WP_012174620.1;transl_table=11 NC_009943.1 RefSeq gene 1430078 1431289 . - . ID=gene-DOLE_RS06130;Name=DOLE_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06130;old_locus_tag=Dole_1197 NC_009943.1 Protein Homology CDS 1430078 1431289 . - 0 ID=cds-WP_012174621.1;Parent=gene-DOLE_RS06130;Dbxref=Genbank:WP_012174621.1;Name=WP_012174621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021367.2;locus_tag=DOLE_RS06130;product=flagellar assembly protein T N-terminal domain-containing protein;protein_id=WP_012174621.1;transl_table=11 NC_009943.1 RefSeq gene 1431338 1431589 . - . ID=gene-DOLE_RS18165;Name=DOLE_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18165 NC_009943.1 GeneMarkS-2+ CDS 1431338 1431589 . - 0 ID=cds-WP_153304369.1;Parent=gene-DOLE_RS18165;Dbxref=Genbank:WP_153304369.1;Name=WP_153304369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18165;product=hypothetical protein;protein_id=WP_153304369.1;transl_table=11 NC_009943.1 RefSeq gene 1431743 1432663 . - . ID=gene-DOLE_RS06140;Name=DOLE_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06140;old_locus_tag=Dole_1198 NC_009943.1 Protein Homology CDS 1431743 1432663 . - 0 ID=cds-WP_012174622.1;Parent=gene-DOLE_RS06140;Dbxref=Genbank:WP_012174622.1;Name=WP_012174622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS06140;product=radical SAM protein;protein_id=WP_012174622.1;transl_table=11 NC_009943.1 RefSeq gene 1432689 1433609 . - . ID=gene-DOLE_RS06145;Name=DOLE_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06145;old_locus_tag=Dole_1199 NC_009943.1 Protein Homology CDS 1432689 1433609 . - 0 ID=cds-WP_012174623.1;Parent=gene-DOLE_RS06145;Dbxref=Genbank:WP_012174623.1;Name=WP_012174623.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: protein motif:HMM:NF012607.2;locus_tag=DOLE_RS06145;product=NAD(P)-dependent oxidoreductase;protein_id=WP_012174623.1;transl_table=11 NC_009943.1 RefSeq gene 1433670 1435016 . - . ID=gene-DOLE_RS06150;Name=DOLE_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06150;old_locus_tag=Dole_1200 NC_009943.1 Protein Homology CDS 1433670 1435016 . - 0 ID=cds-WP_012174624.1;Parent=gene-DOLE_RS06150;Dbxref=Genbank:WP_012174624.1;Name=WP_012174624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175715.1;locus_tag=DOLE_RS06150;product=phenylacetate--CoA ligase family protein;protein_id=WP_012174624.1;transl_table=11 NC_009943.1 RefSeq gene 1435427 1435885 . + . ID=gene-DOLE_RS06155;Name=DOLE_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06155;old_locus_tag=Dole_1201 NC_009943.1 Protein Homology CDS 1435427 1435885 . + 0 ID=cds-WP_012174625.1;Parent=gene-DOLE_RS06155;Dbxref=Genbank:WP_012174625.1;Name=WP_012174625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585215.1;locus_tag=DOLE_RS06155;product=CBS domain-containing protein;protein_id=WP_012174625.1;transl_table=11 NC_009943.1 RefSeq gene 1435898 1436413 . + . ID=gene-DOLE_RS06160;Name=DOLE_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06160;old_locus_tag=Dole_1202 NC_009943.1 Protein Homology CDS 1435898 1436413 . + 0 ID=cds-WP_012174626.1;Parent=gene-DOLE_RS06160;Dbxref=Genbank:WP_012174626.1;Name=WP_012174626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724639.1;locus_tag=DOLE_RS06160;product=lipocalin family protein;protein_id=WP_012174626.1;transl_table=11 NC_009943.1 RefSeq gene 1436479 1437006 . + . ID=gene-DOLE_RS06165;Name=DOLE_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06165;old_locus_tag=Dole_1203 NC_009943.1 Protein Homology CDS 1436479 1437006 . + 0 ID=cds-WP_012174627.1;Parent=gene-DOLE_RS06165;Dbxref=Genbank:WP_012174627.1;Name=WP_012174627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610817.1;locus_tag=DOLE_RS06165;product=gamma carbonic anhydrase family protein;protein_id=WP_012174627.1;transl_table=11 NC_009943.1 RefSeq gene 1437148 1438854 . + . ID=gene-DOLE_RS06170;Name=DOLE_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06170;old_locus_tag=Dole_1204 NC_009943.1 Protein Homology CDS 1437148 1438854 . + 0 ID=cds-WP_012174628.1;Parent=gene-DOLE_RS06170;Dbxref=Genbank:WP_012174628.1;Name=WP_012174628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947419.1;locus_tag=DOLE_RS06170;product=AMP-binding protein;protein_id=WP_012174628.1;transl_table=11 NC_009943.1 RefSeq gene 1438851 1439339 . + . ID=gene-DOLE_RS06175;Name=DOLE_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06175;old_locus_tag=Dole_1205 NC_009943.1 Protein Homology CDS 1438851 1439339 . + 0 ID=cds-WP_012174629.1;Parent=gene-DOLE_RS06175;Dbxref=Genbank:WP_012174629.1;Name=WP_012174629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017936.2;locus_tag=DOLE_RS06175;product=cupin domain-containing protein;protein_id=WP_012174629.1;transl_table=11 NC_009943.1 RefSeq gene 1439426 1439935 . - . ID=gene-DOLE_RS18570;Name=DOLE_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18570 NC_009943.1 GeneMarkS-2+ CDS 1439426 1439935 . - 0 ID=cds-WP_232362730.1;Parent=gene-DOLE_RS18570;Dbxref=Genbank:WP_232362730.1;Name=WP_232362730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18570;product=hypothetical protein;protein_id=WP_232362730.1;transl_table=11 NC_009943.1 RefSeq gene 1440429 1441109 . - . ID=gene-DOLE_RS06185;Name=DOLE_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06185;old_locus_tag=Dole_1207 NC_009943.1 Protein Homology CDS 1440429 1441109 . - 0 ID=cds-WP_041280886.1;Parent=gene-DOLE_RS06185;Dbxref=Genbank:WP_041280886.1;Name=WP_041280886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025089.2;locus_tag=DOLE_RS06185;product=glycosyltransferase;protein_id=WP_041280886.1;transl_table=11 NC_009943.1 RefSeq gene 1441112 1442386 . - . ID=gene-DOLE_RS06190;Name=DOLE_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06190;old_locus_tag=Dole_1208 NC_009943.1 GeneMarkS-2+ CDS 1441112 1442386 . - 0 ID=cds-WP_012174632.1;Parent=gene-DOLE_RS06190;Dbxref=Genbank:WP_012174632.1;Name=WP_012174632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06190;product=homoserine dehydrogenase;protein_id=WP_012174632.1;transl_table=11 NC_009943.1 RefSeq gene 1442541 1443125 . - . ID=gene-DOLE_RS06195;Name=DOLE_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06195;old_locus_tag=Dole_1209 NC_009943.1 GeneMarkS-2+ CDS 1442541 1443125 . - 0 ID=cds-WP_012174633.1;Parent=gene-DOLE_RS06195;Dbxref=Genbank:WP_012174633.1;Name=WP_012174633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06195;product=DUF2878 family protein;protein_id=WP_012174633.1;transl_table=11 NC_009943.1 RefSeq gene 1443373 1443831 . - . ID=gene-DOLE_RS06200;Name=DOLE_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06200;old_locus_tag=Dole_1210 NC_009943.1 GeneMarkS-2+ CDS 1443373 1443831 . - 0 ID=cds-WP_012174634.1;Parent=gene-DOLE_RS06200;Dbxref=Genbank:WP_012174634.1;Name=WP_012174634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06200;product=hypothetical protein;protein_id=WP_012174634.1;transl_table=11 NC_009943.1 RefSeq gene 1443911 1444585 . - . ID=gene-DOLE_RS18170;Name=DOLE_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18170;old_locus_tag=Dole_1211 NC_009943.1 GeneMarkS-2+ CDS 1443911 1444585 . - 0 ID=cds-WP_153304370.1;Parent=gene-DOLE_RS18170;Dbxref=Genbank:WP_153304370.1;Name=WP_153304370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18170;product=hypothetical protein;protein_id=WP_153304370.1;transl_table=11 NC_009943.1 RefSeq gene 1444605 1445474 . - . ID=gene-DOLE_RS06210;Name=DOLE_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06210;old_locus_tag=Dole_1212 NC_009943.1 Protein Homology CDS 1444605 1445474 . - 0 ID=cds-WP_041280397.1;Parent=gene-DOLE_RS06210;Dbxref=Genbank:WP_041280397.1;Name=WP_041280397.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=DOLE_RS06210;product=IS3 family transposase;protein_id=WP_041280397.1;transl_table=11 NC_009943.1 RefSeq gene 1445486 1445791 . - . ID=gene-DOLE_RS06215;Name=DOLE_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06215;old_locus_tag=Dole_1213 NC_009943.1 Protein Homology CDS 1445486 1445791 . - 0 ID=cds-WP_041280398.1;Parent=gene-DOLE_RS06215;Dbxref=Genbank:WP_041280398.1;Name=WP_041280398.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=DOLE_RS06215;product=transposase;protein_id=WP_041280398.1;transl_table=11 NC_009943.1 RefSeq gene 1445945 1446409 . - . ID=gene-DOLE_RS06220;Name=DOLE_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06220;old_locus_tag=Dole_1214 NC_009943.1 GeneMarkS-2+ CDS 1445945 1446409 . - 0 ID=cds-WP_012174638.1;Parent=gene-DOLE_RS06220;Dbxref=Genbank:WP_012174638.1;Name=WP_012174638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06220;product=hypothetical protein;protein_id=WP_012174638.1;transl_table=11 NC_009943.1 RefSeq gene 1446868 1450146 . - . ID=gene-DOLE_RS17140;Name=DOLE_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17140;old_locus_tag=Dole_1215 NC_009943.1 Protein Homology CDS 1446868 1450146 . - 0 ID=cds-WP_012174639.1;Parent=gene-DOLE_RS17140;Dbxref=Genbank:WP_012174639.1;Name=WP_012174639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966767.1;locus_tag=DOLE_RS17140;product=efflux RND transporter permease subunit;protein_id=WP_012174639.1;transl_table=11 NC_009943.1 RefSeq gene 1450143 1451282 . - . ID=gene-DOLE_RS06230;Name=DOLE_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06230;old_locus_tag=Dole_1216 NC_009943.1 Protein Homology CDS 1450143 1451282 . - 0 ID=cds-WP_012174640.1;Parent=gene-DOLE_RS06230;Dbxref=Genbank:WP_012174640.1;Name=WP_012174640.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=DOLE_RS06230;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012174640.1;transl_table=11 NC_009943.1 RefSeq gene 1451279 1452595 . - . ID=gene-DOLE_RS06235;Name=DOLE_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06235;old_locus_tag=Dole_1217 NC_009943.1 Protein Homology CDS 1451279 1452595 . - 0 ID=cds-WP_012174641.1;Parent=gene-DOLE_RS06235;Dbxref=Genbank:WP_012174641.1;Name=WP_012174641.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=DOLE_RS06235;product=TolC family protein;protein_id=WP_012174641.1;transl_table=11 NC_009943.1 RefSeq gene 1452751 1453371 . - . ID=gene-DOLE_RS17145;Name=DOLE_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17145;old_locus_tag=Dole_1218 NC_009943.1 Protein Homology CDS 1452751 1453371 . - 0 ID=cds-WP_012174642.1;Parent=gene-DOLE_RS17145;Dbxref=Genbank:WP_012174642.1;Name=WP_012174642.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019958.2;locus_tag=DOLE_RS17145;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012174642.1;transl_table=11 NC_009943.1 RefSeq gene 1453646 1454998 . + . ID=gene-DOLE_RS06245;Name=DOLE_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06245;old_locus_tag=Dole_1219 NC_009943.1 Protein Homology CDS 1453646 1454998 . + 0 ID=cds-WP_012174089.1-2;Parent=gene-DOLE_RS06245;Dbxref=Genbank:WP_012174089.1;Name=WP_012174089.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174089.1;locus_tag=DOLE_RS06245;product=ISNCY-like element ISDol1 family transposase;protein_id=WP_012174089.1;transl_table=11 NC_009943.1 RefSeq gene 1455641 1456213 . + . ID=gene-DOLE_RS06250;Name=DOLE_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06250;old_locus_tag=Dole_1220 NC_009943.1 GeneMarkS-2+ CDS 1455641 1456213 . + 0 ID=cds-WP_012174643.1;Parent=gene-DOLE_RS06250;Dbxref=Genbank:WP_012174643.1;Name=WP_012174643.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06250;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_012174643.1;transl_table=11 NC_009943.1 RefSeq gene 1456597 1458936 . - . ID=gene-DOLE_RS06260;Name=DOLE_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06260;old_locus_tag=Dole_1221 NC_009943.1 Protein Homology CDS 1456597 1458936 . - 0 ID=cds-WP_012174644.1;Parent=gene-DOLE_RS06260;Dbxref=Genbank:WP_012174644.1;Name=WP_012174644.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024907.2;locus_tag=DOLE_RS06260;product=VCBS repeat-containing protein;protein_id=WP_012174644.1;transl_table=11 NC_009943.1 RefSeq gene 1459211 1460509 . - . ID=gene-DOLE_RS06265;Name=DOLE_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06265;old_locus_tag=Dole_1222 NC_009943.1 Protein Homology CDS 1459211 1460509 . - 0 ID=cds-WP_012174645.1;Parent=gene-DOLE_RS06265;Dbxref=Genbank:WP_012174645.1;Name=WP_012174645.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014774.2;locus_tag=DOLE_RS06265;product=(Fe-S)-binding protein;protein_id=WP_012174645.1;transl_table=11 NC_009943.1 RefSeq gene 1460666 1461742 . - . ID=gene-DOLE_RS06270;Name=ahbD;gbkey=Gene;gene=ahbD;gene_biotype=protein_coding;locus_tag=DOLE_RS06270;old_locus_tag=Dole_1223 NC_009943.1 Protein Homology CDS 1460666 1461742 . - 0 ID=cds-WP_012174646.1;Parent=gene-DOLE_RS06270;Dbxref=Genbank:WP_012174646.1;Name=WP_012174646.1;Ontology_term=GO:0006785,GO:1904047;gbkey=CDS;gene=ahbD;go_function=S-adenosyl-L-methionine binding|1904047||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957685.1;locus_tag=DOLE_RS06270;product=heme b synthase;protein_id=WP_012174646.1;transl_table=11 NC_009943.1 RefSeq gene 1461785 1462756 . - . ID=gene-DOLE_RS06275;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=DOLE_RS06275;old_locus_tag=Dole_1224 NC_009943.1 Protein Homology CDS 1461785 1462756 . - 0 ID=cds-WP_012174647.1;Parent=gene-DOLE_RS06275;Dbxref=Genbank:WP_012174647.1;Name=WP_012174647.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904651.1;locus_tag=DOLE_RS06275;product=porphobilinogen synthase;protein_id=WP_012174647.1;transl_table=11 NC_009943.1 RefSeq gene 1462766 1463953 . - . ID=gene-DOLE_RS06280;Name=ahbC;gbkey=Gene;gene=ahbC;gene_biotype=protein_coding;locus_tag=DOLE_RS06280;old_locus_tag=Dole_1225 NC_009943.1 Protein Homology CDS 1462766 1463953 . - 0 ID=cds-WP_012174648.1;Parent=gene-DOLE_RS06280;Dbxref=Genbank:WP_012174648.1;Name=WP_012174648.1;Ontology_term=GO:0006785,GO:1904047;gbkey=CDS;gene=ahbC;go_function=S-adenosyl-L-methionine binding|1904047||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948595.1;locus_tag=DOLE_RS06280;product=12%2C18-didecarboxysiroheme deacetylase;protein_id=WP_012174648.1;transl_table=11 NC_009943.1 RefSeq gene 1463950 1465743 . - . ID=gene-DOLE_RS06285;Name=DOLE_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06285;old_locus_tag=Dole_1226 NC_009943.1 Protein Homology CDS 1463950 1465743 . - 0 ID=cds-WP_012174649.1;Parent=gene-DOLE_RS06285;Dbxref=Genbank:WP_012174649.1;Name=WP_012174649.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948596.1;locus_tag=DOLE_RS06285;product=AAA family ATPase;protein_id=WP_012174649.1;transl_table=11 NC_009943.1 RefSeq gene 1466087 1467391 . + . ID=gene-DOLE_RS06290;Name=DOLE_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06290;old_locus_tag=Dole_1227 NC_009943.1 Protein Homology CDS 1466087 1467391 . + 0 ID=cds-WP_012174650.1;Parent=gene-DOLE_RS06290;Dbxref=Genbank:WP_012174650.1;Name=WP_012174650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS06290;product=sensor domain-containing diguanylate cyclase;protein_id=WP_012174650.1;transl_table=11 NC_009943.1 RefSeq gene 1467684 1468199 . + . ID=gene-DOLE_RS06295;Name=DOLE_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06295;old_locus_tag=Dole_1228 NC_009943.1 Protein Homology CDS 1467684 1468199 . + 0 ID=cds-WP_012174651.1;Parent=gene-DOLE_RS06295;Dbxref=Genbank:WP_012174651.1;Name=WP_012174651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959677.1;locus_tag=DOLE_RS06295;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_012174651.1;transl_table=11 NC_009943.1 RefSeq gene 1468196 1468735 . + . ID=gene-DOLE_RS06300;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=DOLE_RS06300;old_locus_tag=Dole_1229 NC_009943.1 Protein Homology CDS 1468196 1468735 . + 0 ID=cds-WP_012174652.1;Parent=gene-DOLE_RS06300;Dbxref=Genbank:WP_012174652.1;Name=WP_012174652.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609601.1;locus_tag=DOLE_RS06300;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_012174652.1;transl_table=11 NC_009943.1 RefSeq gene 1468732 1469454 . + . ID=gene-DOLE_RS06305;Name=DOLE_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06305;old_locus_tag=Dole_1230 NC_009943.1 Protein Homology CDS 1468732 1469454 . + 0 ID=cds-WP_012174653.1;Parent=gene-DOLE_RS06305;Dbxref=Genbank:WP_012174653.1;Name=WP_012174653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014685.2;locus_tag=DOLE_RS06305;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_012174653.1;transl_table=11 NC_009943.1 RefSeq gene 1469564 1470583 . + . ID=gene-DOLE_RS06310;Name=DOLE_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06310;old_locus_tag=Dole_1231 NC_009943.1 Protein Homology CDS 1469564 1470583 . + 0 ID=cds-WP_012174654.1;Parent=gene-DOLE_RS06310;Dbxref=Genbank:WP_012174654.1;Name=WP_012174654.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.2;locus_tag=DOLE_RS06310;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_012174654.1;transl_table=11 NC_009943.1 RefSeq gene 1470764 1471417 . + . ID=gene-DOLE_RS06315;Name=DOLE_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06315;old_locus_tag=Dole_1232 NC_009943.1 Protein Homology CDS 1470764 1471417 . + 0 ID=cds-WP_012174655.1;Parent=gene-DOLE_RS06315;Dbxref=Genbank:WP_012174655.1;Name=WP_012174655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965417.1;locus_tag=DOLE_RS06315;product=lactate utilization protein;protein_id=WP_012174655.1;transl_table=11 NC_009943.1 RefSeq gene 1471429 1472379 . + . ID=gene-DOLE_RS06320;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=DOLE_RS06320;old_locus_tag=Dole_1233 NC_009943.1 Protein Homology CDS 1471429 1472379 . + 0 ID=cds-WP_052294337.1;Parent=gene-DOLE_RS06320;Dbxref=Genbank:WP_052294337.1;Name=WP_052294337.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906335.1;locus_tag=DOLE_RS06320;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_052294337.1;transl_table=11 NC_009943.1 RefSeq gene 1472403 1473191 . + . ID=gene-DOLE_RS06325;Name=DOLE_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06325;old_locus_tag=Dole_1234 NC_009943.1 Protein Homology CDS 1472403 1473191 . + 0 ID=cds-WP_012174657.1;Parent=gene-DOLE_RS06325;Dbxref=Genbank:WP_012174657.1;Name=WP_012174657.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024109.2;locus_tag=DOLE_RS06325;product=alpha/beta fold hydrolase;protein_id=WP_012174657.1;transl_table=11 NC_009943.1 RefSeq gene 1473333 1473920 . + . ID=gene-DOLE_RS06330;Name=DOLE_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06330;old_locus_tag=Dole_1235 NC_009943.1 Protein Homology CDS 1473333 1473920 . + 0 ID=cds-WP_012174658.1;Parent=gene-DOLE_RS06330;Dbxref=Genbank:WP_012174658.1;Name=WP_012174658.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013760.2;locus_tag=DOLE_RS06330;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_012174658.1;transl_table=11 NC_009943.1 RefSeq gene 1473917 1474393 . + . ID=gene-DOLE_RS06335;Name=DOLE_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06335;old_locus_tag=Dole_1236 NC_009943.1 GeneMarkS-2+ CDS 1473917 1474393 . + 0 ID=cds-WP_012174659.1;Parent=gene-DOLE_RS06335;Dbxref=Genbank:WP_012174659.1;Name=WP_012174659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06335;product=hypothetical protein;protein_id=WP_012174659.1;transl_table=11 NC_009943.1 RefSeq gene 1474390 1475541 . + . ID=gene-DOLE_RS06340;Name=DOLE_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06340;old_locus_tag=Dole_1237 NC_009943.1 GeneMarkS-2+ CDS 1474390 1475541 . + 0 ID=cds-WP_012174660.1;Parent=gene-DOLE_RS06340;Dbxref=Genbank:WP_012174660.1;Name=WP_012174660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06340;product=hypothetical protein;protein_id=WP_012174660.1;transl_table=11 NC_009943.1 RefSeq gene 1475529 1477535 . + . ID=gene-DOLE_RS06345;Name=DOLE_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06345;old_locus_tag=Dole_1238 NC_009943.1 GeneMarkS-2+ CDS 1475529 1477535 . + 0 ID=cds-WP_012174661.1;Parent=gene-DOLE_RS06345;Dbxref=Genbank:WP_012174661.1;Name=WP_012174661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06345;product=hypothetical protein;protein_id=WP_012174661.1;transl_table=11 NC_009943.1 RefSeq gene 1477532 1479334 . + . ID=gene-DOLE_RS06350;Name=DOLE_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06350;old_locus_tag=Dole_1239 NC_009943.1 GeneMarkS-2+ CDS 1477532 1479334 . + 0 ID=cds-WP_012174662.1;Parent=gene-DOLE_RS06350;Dbxref=Genbank:WP_012174662.1;Name=WP_012174662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06350;product=hypothetical protein;protein_id=WP_012174662.1;transl_table=11 NC_009943.1 RefSeq gene 1479370 1480734 . + . ID=gene-DOLE_RS06355;Name=DOLE_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06355;old_locus_tag=Dole_1240 NC_009943.1 GeneMarkS-2+ CDS 1479370 1480734 . + 0 ID=cds-WP_153304372.1;Parent=gene-DOLE_RS06355;Dbxref=Genbank:WP_153304372.1;Name=WP_153304372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06355;product=hypothetical protein;protein_id=WP_153304372.1;transl_table=11 NC_009943.1 RefSeq gene 1480777 1482504 . - . ID=gene-DOLE_RS06360;Name=DOLE_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06360;old_locus_tag=Dole_1241 NC_009943.1 Protein Homology CDS 1480777 1482504 . - 0 ID=cds-WP_012174664.1;Parent=gene-DOLE_RS06360;Dbxref=Genbank:WP_012174664.1;Name=WP_012174664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959693.1;locus_tag=DOLE_RS06360;product=YcaO-like family protein;protein_id=WP_012174664.1;transl_table=11 NC_009943.1 RefSeq gene 1482951 1483589 . - . ID=gene-DOLE_RS17155;Name=DOLE_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17155;old_locus_tag=Dole_1242 NC_009943.1 Protein Homology CDS 1482951 1483589 . - 0 ID=cds-WP_012174665.1;Parent=gene-DOLE_RS17155;Dbxref=Genbank:WP_012174665.1;Name=WP_012174665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176130.1;locus_tag=DOLE_RS17155;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012174665.1;transl_table=11 NC_009943.1 RefSeq gene 1483849 1484205 . + . ID=gene-DOLE_RS06370;Name=DOLE_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06370;old_locus_tag=Dole_1243 NC_009943.1 GeneMarkS-2+ CDS 1483849 1484205 . + 0 ID=cds-WP_012174666.1;Parent=gene-DOLE_RS06370;Dbxref=Genbank:WP_012174666.1;Name=WP_012174666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06370;product=hypothetical protein;protein_id=WP_012174666.1;transl_table=11 NC_009943.1 RefSeq gene 1484212 1486530 . - . ID=gene-DOLE_RS06375;Name=DOLE_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06375;old_locus_tag=Dole_1244 NC_009943.1 Protein Homology CDS 1484212 1486530 . - 0 ID=cds-WP_012174667.1;Parent=gene-DOLE_RS06375;Dbxref=Genbank:WP_012174667.1;Name=WP_012174667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875119.1;locus_tag=DOLE_RS06375;product=GspE/PulE family protein;protein_id=WP_012174667.1;transl_table=11 NC_009943.1 RefSeq gene 1486598 1486852 . - . ID=gene-DOLE_RS06380;Name=DOLE_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06380;old_locus_tag=Dole_1245 NC_009943.1 GeneMarkS-2+ CDS 1486598 1486852 . - 0 ID=cds-WP_012174668.1;Parent=gene-DOLE_RS06380;Dbxref=Genbank:WP_012174668.1;Name=WP_012174668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06380;product=hypothetical protein;protein_id=WP_012174668.1;transl_table=11 NC_009943.1 RefSeq gene 1487278 1489455 . + . ID=gene-DOLE_RS06385;Name=DOLE_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06385;old_locus_tag=Dole_1246 NC_009943.1 Protein Homology CDS 1487278 1489455 . + 0 ID=cds-WP_041280892.1;Parent=gene-DOLE_RS06385;Dbxref=Genbank:WP_041280892.1;Name=WP_041280892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662661.1;locus_tag=DOLE_RS06385;product=acetate--CoA ligase family protein;protein_id=WP_041280892.1;transl_table=11 NC_009943.1 RefSeq gene 1489484 1491439 . + . ID=gene-DOLE_RS06390;Name=DOLE_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06390;old_locus_tag=Dole_1247 NC_009943.1 Protein Homology CDS 1489484 1491439 . + 0 ID=cds-WP_012174670.1;Parent=gene-DOLE_RS06390;Dbxref=Genbank:WP_012174670.1;Name=WP_012174670.1;Ontology_term=GO:0019287,GO:0030729;gbkey=CDS;go_function=acetoacetate-CoA ligase activity|0030729||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878005.1;locus_tag=DOLE_RS06390;product=acetoacetate--CoA ligase;protein_id=WP_012174670.1;transl_table=11 NC_009943.1 RefSeq gene 1491426 1493132 . + . ID=gene-DOLE_RS06395;Name=DOLE_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06395;old_locus_tag=Dole_1248 NC_009943.1 Protein Homology CDS 1491426 1493132 . + 0 ID=cds-WP_012174671.1;Parent=gene-DOLE_RS06395;Dbxref=Genbank:WP_012174671.1;Name=WP_012174671.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012356.2;locus_tag=DOLE_RS06395;product=sugar phosphorylase;protein_id=WP_012174671.1;transl_table=11 NC_009943.1 RefSeq gene 1493191 1493278 . + . ID=gene-DOLE_RS06400;Name=DOLE_RS06400;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS06400;old_locus_tag=Dole_R0022 NC_009943.1 tRNAscan-SE tRNA 1493191 1493278 . + . ID=rna-DOLE_RS06400;Parent=gene-DOLE_RS06400;anticodon=(pos:1493225..1493227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS06400;product=tRNA-Leu NC_009943.1 tRNAscan-SE exon 1493191 1493278 . + . ID=exon-DOLE_RS06400-1;Parent=rna-DOLE_RS06400;anticodon=(pos:1493225..1493227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS06400;product=tRNA-Leu NC_009943.1 RefSeq gene 1493399 1494220 . - . ID=gene-DOLE_RS06405;Name=DOLE_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06405;old_locus_tag=Dole_1249 NC_009943.1 Protein Homology CDS 1493399 1494220 . - 0 ID=cds-WP_012174672.1;Parent=gene-DOLE_RS06405;Dbxref=Genbank:WP_012174672.1;Name=WP_012174672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=DOLE_RS06405;product=SDR family oxidoreductase;protein_id=WP_012174672.1;transl_table=11 NC_009943.1 RefSeq gene 1494217 1495059 . - . ID=gene-DOLE_RS06410;Name=DOLE_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06410;old_locus_tag=Dole_1250 NC_009943.1 Protein Homology CDS 1494217 1495059 . - 0 ID=cds-WP_012174673.1;Parent=gene-DOLE_RS06410;Dbxref=Genbank:WP_012174673.1;Name=WP_012174673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956682.1;locus_tag=DOLE_RS06410;product=DUF4405 domain-containing protein;protein_id=WP_012174673.1;transl_table=11 NC_009943.1 RefSeq gene 1495139 1496074 . - . ID=gene-DOLE_RS06415;Name=DOLE_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06415;old_locus_tag=Dole_1251 NC_009943.1 Protein Homology CDS 1495139 1496074 . - 0 ID=cds-WP_012174674.1;Parent=gene-DOLE_RS06415;Dbxref=Genbank:WP_012174674.1;Name=WP_012174674.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039830.1;locus_tag=DOLE_RS06415;product=DUF5692 family protein;protein_id=WP_012174674.1;transl_table=11 NC_009943.1 RefSeq gene 1496328 1496654 . - . ID=gene-DOLE_RS06420;Name=DOLE_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06420;old_locus_tag=Dole_1252 NC_009943.1 Protein Homology CDS 1496328 1496654 . - 0 ID=cds-WP_012174675.1;Parent=gene-DOLE_RS06420;Dbxref=Genbank:WP_012174675.1;Name=WP_012174675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014021.2;locus_tag=DOLE_RS06420;product=nucleotidyltransferase domain-containing protein;protein_id=WP_012174675.1;transl_table=11 NC_009943.1 RefSeq gene 1497050 1497385 . + . ID=gene-DOLE_RS06425;Name=DOLE_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06425;old_locus_tag=Dole_1253 NC_009943.1 Protein Homology CDS 1497050 1497385 . + 0 ID=cds-WP_012174676.1;Parent=gene-DOLE_RS06425;Dbxref=Genbank:WP_012174676.1;Name=WP_012174676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176357.1;locus_tag=DOLE_RS06425;product=DUF1232 domain-containing protein;protein_id=WP_012174676.1;transl_table=11 NC_009943.1 RefSeq gene 1497401 1498330 . + . ID=gene-DOLE_RS17160;Name=DOLE_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17160;old_locus_tag=Dole_1254 NC_009943.1 GeneMarkS-2+ CDS 1497401 1498330 . + 0 ID=cds-WP_012174677.1;Parent=gene-DOLE_RS17160;Dbxref=Genbank:WP_012174677.1;Name=WP_012174677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17160;product=hypothetical protein;protein_id=WP_012174677.1;transl_table=11 NC_009943.1 RefSeq gene 1498381 1498662 . + . ID=gene-DOLE_RS06435;Name=DOLE_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06435;old_locus_tag=Dole_1255 NC_009943.1 Protein Homology CDS 1498381 1498662 . + 0 ID=cds-WP_232362731.1;Parent=gene-DOLE_RS06435;Dbxref=Genbank:WP_232362731.1;Name=WP_232362731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176356.1;locus_tag=DOLE_RS06435;product=PQ-loop repeat-containing protein;protein_id=WP_232362731.1;transl_table=11 NC_009943.1 RefSeq gene 1499144 1500622 . + . ID=gene-DOLE_RS06445;Name=DOLE_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06445;old_locus_tag=Dole_1257 NC_009943.1 Protein Homology CDS 1499144 1500622 . + 0 ID=cds-WP_232362732.1;Parent=gene-DOLE_RS06445;Dbxref=Genbank:WP_232362732.1;Name=WP_232362732.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071500.1;locus_tag=DOLE_RS06445;product=sigma 54-interacting transcriptional regulator;protein_id=WP_232362732.1;transl_table=11 NC_009943.1 RefSeq gene 1500676 1503039 . + . ID=gene-DOLE_RS06450;Name=DOLE_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06450;old_locus_tag=Dole_1258 NC_009943.1 Protein Homology CDS 1500676 1503039 . + 0 ID=cds-WP_012174681.1;Parent=gene-DOLE_RS06450;Dbxref=Genbank:WP_012174681.1;Name=WP_012174681.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF037510.2;locus_tag=DOLE_RS06450;product=type I restriction endonuclease subunit R;protein_id=WP_012174681.1;transl_table=11 NC_009943.1 RefSeq gene 1503056 1504528 . + . ID=gene-DOLE_RS06455;Name=DOLE_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06455;old_locus_tag=Dole_1259 NC_009943.1 Protein Homology CDS 1503056 1504528 . + 0 ID=cds-WP_012174682.1;Parent=gene-DOLE_RS06455;Dbxref=Genbank:WP_012174682.1;Name=WP_012174682.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=DOLE_RS06455;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_012174682.1;transl_table=11 NC_009943.1 RefSeq gene 1504531 1505688 . + . ID=gene-DOLE_RS06460;Name=DOLE_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06460;old_locus_tag=Dole_1260 NC_009943.1 Protein Homology CDS 1504531 1505688 . + 0 ID=cds-WP_012174683.1;Parent=gene-DOLE_RS06460;Dbxref=Genbank:WP_012174683.1;Name=WP_012174683.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=DOLE_RS06460;product=restriction endonuclease subunit S;protein_id=WP_012174683.1;transl_table=11 NC_009943.1 RefSeq gene 1505694 1509782 . + . ID=gene-DOLE_RS17165;Name=DOLE_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17165;old_locus_tag=Dole_1261 NC_009943.1 Protein Homology CDS 1505694 1509782 . + 0 ID=cds-WP_012174684.1;Parent=gene-DOLE_RS17165;Dbxref=Genbank:WP_012174684.1;Name=WP_012174684.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=DOLE_RS17165;product=N-6 DNA methylase;protein_id=WP_012174684.1;transl_table=11 NC_009943.1 RefSeq gene 1509775 1511382 . + . ID=gene-DOLE_RS06470;Name=DOLE_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06470;old_locus_tag=Dole_1262 NC_009943.1 Protein Homology CDS 1509775 1511382 . + 0 ID=cds-WP_012174685.1;Parent=gene-DOLE_RS06470;Dbxref=Genbank:WP_012174685.1;Name=WP_012174685.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025869.2;locus_tag=DOLE_RS06470;product=AAA-like domain-containing protein;protein_id=WP_012174685.1;transl_table=11 NC_009943.1 RefSeq gene 1511424 1512050 . + . ID=gene-DOLE_RS06475;Name=DOLE_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06475;old_locus_tag=Dole_1263 NC_009943.1 Protein Homology CDS 1511424 1512050 . + 0 ID=cds-WP_153304374.1;Parent=gene-DOLE_RS06475;Dbxref=Genbank:WP_153304374.1;Name=WP_153304374.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024197.2;locus_tag=DOLE_RS06475;product=EcsC family protein;protein_id=WP_153304374.1;transl_table=11 NC_009943.1 RefSeq gene 1512143 1512979 . + . ID=gene-DOLE_RS06480;Name=DOLE_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06480;old_locus_tag=Dole_1264 NC_009943.1 Protein Homology CDS 1512143 1512979 . + 0 ID=cds-WP_012174687.1;Parent=gene-DOLE_RS06480;Dbxref=Genbank:WP_012174687.1;Name=WP_012174687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024279.2;locus_tag=DOLE_RS06480;product=DUF3825 domain-containing protein;protein_id=WP_012174687.1;transl_table=11 NC_009943.1 RefSeq gene 1512979 1513443 . + . ID=gene-DOLE_RS06485;Name=DOLE_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06485;old_locus_tag=Dole_1265 NC_009943.1 Protein Homology CDS 1512979 1513443 . + 0 ID=cds-WP_012174688.1;Parent=gene-DOLE_RS06485;Dbxref=Genbank:WP_012174688.1;Name=WP_012174688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587226.1;locus_tag=DOLE_RS06485;product=phosphatidylglycerophosphatase A;protein_id=WP_012174688.1;transl_table=11 NC_009943.1 RefSeq gene 1513478 1514026 . + . ID=gene-DOLE_RS06490;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=DOLE_RS06490;old_locus_tag=Dole_1266 NC_009943.1 Protein Homology CDS 1513478 1514026 . + 0 ID=cds-WP_041280408.1;Parent=gene-DOLE_RS06490;Dbxref=Genbank:WP_041280408.1;Name=WP_041280408.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'-5'-RNA ligase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: protein motif:HMM:TIGR02258.1;locus_tag=DOLE_RS06490;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_041280408.1;transl_table=11 NC_009943.1 RefSeq gene 1514181 1515257 . + . ID=gene-DOLE_RS06495;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=DOLE_RS06495;old_locus_tag=Dole_1267 NC_009943.1 Protein Homology CDS 1514181 1515257 . + 0 ID=cds-WP_012174690.1;Parent=gene-DOLE_RS06495;Dbxref=Genbank:WP_012174690.1;Name=WP_012174690.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958341.1;locus_tag=DOLE_RS06495;product=recombinase RecA;protein_id=WP_012174690.1;transl_table=11 NC_009943.1 RefSeq gene 1515314 1517944 . + . ID=gene-DOLE_RS06500;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=DOLE_RS06500;old_locus_tag=Dole_1268 NC_009943.1 Protein Homology CDS 1515314 1517944 . + 0 ID=cds-WP_012174691.1;Parent=gene-DOLE_RS06500;Dbxref=Genbank:WP_012174691.1;Name=WP_012174691.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174691.1;locus_tag=DOLE_RS06500;product=alanine--tRNA ligase;protein_id=WP_012174691.1;transl_table=11 NC_009943.1 RefSeq gene 1518049 1518789 . + . ID=gene-DOLE_RS06505;Name=DOLE_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06505;old_locus_tag=Dole_1269 NC_009943.1 Protein Homology CDS 1518049 1518789 . + 0 ID=cds-WP_012174692.1;Parent=gene-DOLE_RS06505;Dbxref=Genbank:WP_012174692.1;Name=WP_012174692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013793.2;locus_tag=DOLE_RS06505;product=AAA family ATPase;protein_id=WP_012174692.1;transl_table=11 NC_009943.1 RefSeq gene 1518831 1519322 . + . ID=gene-DOLE_RS17170;Name=DOLE_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17170;old_locus_tag=Dole_1270 NC_009943.1 GeneMarkS-2+ CDS 1518831 1519322 . + 0 ID=cds-WP_012174693.1;Parent=gene-DOLE_RS17170;Dbxref=Genbank:WP_012174693.1;Name=WP_012174693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17170;product=hypothetical protein;protein_id=WP_012174693.1;transl_table=11 NC_009943.1 RefSeq gene 1519583 1520686 . + . ID=gene-DOLE_RS06515;Name=mqnE;gbkey=Gene;gene=mqnE;gene_biotype=protein_coding;locus_tag=DOLE_RS06515;old_locus_tag=Dole_1271 NC_009943.1 Protein Homology CDS 1519583 1520686 . + 0 ID=cds-WP_012174694.1;Parent=gene-DOLE_RS06515;Dbxref=Genbank:WP_012174694.1;Name=WP_012174694.1;Ontology_term=GO:0009234;gbkey=CDS;gene=mqnE;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965111.1;locus_tag=DOLE_RS06515;product=aminofutalosine synthase MqnE;protein_id=WP_012174694.1;transl_table=11 NC_009943.1 RefSeq gene 1520688 1521755 . + . ID=gene-DOLE_RS06520;Name=mqnC;gbkey=Gene;gene=mqnC;gene_biotype=protein_coding;locus_tag=DOLE_RS06520;old_locus_tag=Dole_1272 NC_009943.1 Protein Homology CDS 1520688 1521755 . + 0 ID=cds-WP_012174695.1;Parent=gene-DOLE_RS06520;Dbxref=Genbank:WP_012174695.1;Name=WP_012174695.1;Ontology_term=GO:0009234;gbkey=CDS;gene=mqnC;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958797.1;locus_tag=DOLE_RS06520;product=dehypoxanthine futalosine cyclase;protein_id=WP_012174695.1;transl_table=11 NC_009943.1 RefSeq gene 1521805 1524444 . - . ID=gene-DOLE_RS06525;Name=DOLE_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06525;old_locus_tag=Dole_1273 NC_009943.1 Protein Homology CDS 1521805 1524444 . - 0 ID=cds-WP_012174696.1;Parent=gene-DOLE_RS06525;Dbxref=Genbank:WP_012174696.1;Name=WP_012174696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS06525;product=tetratricopeptide repeat protein;protein_id=WP_012174696.1;transl_table=11 NC_009943.1 RefSeq gene 1524476 1526155 . - . ID=gene-DOLE_RS06530;Name=DOLE_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06530;old_locus_tag=Dole_1274 NC_009943.1 Protein Homology CDS 1524476 1526155 . - 0 ID=cds-WP_012174697.1;Parent=gene-DOLE_RS06530;Dbxref=Genbank:WP_012174697.1;Name=WP_012174697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS06530;product=tetratricopeptide repeat protein;protein_id=WP_012174697.1;transl_table=11 NC_009943.1 RefSeq gene 1526472 1527662 . + . ID=gene-DOLE_RS06535;Name=DOLE_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06535;old_locus_tag=Dole_1275 NC_009943.1 Protein Homology CDS 1526472 1527662 . + 0 ID=cds-WP_167320854.1;Parent=gene-DOLE_RS06535;Dbxref=Genbank:WP_167320854.1;Name=WP_167320854.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF014081.2;locus_tag=DOLE_RS06535;product=amidohydrolase family protein;protein_id=WP_167320854.1;transl_table=11 NC_009943.1 RefSeq gene 1527665 1528501 . + . ID=gene-DOLE_RS06540;Name=DOLE_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06540;old_locus_tag=Dole_1276 NC_009943.1 Protein Homology CDS 1527665 1528501 . + 0 ID=cds-WP_012174699.1;Parent=gene-DOLE_RS06540;Dbxref=Genbank:WP_012174699.1;Name=WP_012174699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014658.2;locus_tag=DOLE_RS06540;product=menaquinone biosynthesis protein;protein_id=WP_012174699.1;transl_table=11 NC_009943.1 RefSeq gene 1528523 1529371 . - . ID=gene-DOLE_RS06545;Name=DOLE_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06545;old_locus_tag=Dole_1277 NC_009943.1 Protein Homology CDS 1528523 1529371 . - 0 ID=cds-WP_012174700.1;Parent=gene-DOLE_RS06545;Dbxref=Genbank:WP_012174700.1;Name=WP_012174700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959265.1;locus_tag=DOLE_RS06545;product=1%2C4-dihydroxy-6-naphthoate synthase;protein_id=WP_012174700.1;transl_table=11 NC_009943.1 RefSeq gene 1529358 1530116 . - . ID=gene-DOLE_RS17175;Name=mqnB;gbkey=Gene;gene=mqnB;gene_biotype=protein_coding;locus_tag=DOLE_RS17175;old_locus_tag=Dole_1278 NC_009943.1 Protein Homology CDS 1529358 1530116 . - 0 ID=cds-WP_012174701.1;Parent=gene-DOLE_RS17175;Dbxref=Genbank:WP_012174701.1;Name=WP_012174701.1;Ontology_term=GO:0009234;gbkey=CDS;gene=mqnB;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: protein motif:HMM:NF013232.2;locus_tag=DOLE_RS17175;product=futalosine hydrolase;protein_id=WP_012174701.1;transl_table=11 NC_009943.1 RefSeq gene 1530341 1531723 . + . ID=gene-DOLE_RS06555;Name=DOLE_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06555;old_locus_tag=Dole_1279 NC_009943.1 Protein Homology CDS 1530341 1531723 . + 0 ID=cds-WP_012174702.1;Parent=gene-DOLE_RS06555;Dbxref=Genbank:WP_012174702.1;Name=WP_012174702.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878605.1;locus_tag=DOLE_RS06555;product=nucleotide sugar dehydrogenase;protein_id=WP_012174702.1;transl_table=11 NC_009943.1 RefSeq gene 1531750 1532709 . + . ID=gene-DOLE_RS06560;Name=DOLE_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06560;old_locus_tag=Dole_1280 NC_009943.1 Protein Homology CDS 1531750 1532709 . + 0 ID=cds-WP_012174703.1;Parent=gene-DOLE_RS06560;Dbxref=Genbank:WP_012174703.1;Name=WP_012174703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878465.1;locus_tag=DOLE_RS06560;product=SDR family oxidoreductase;protein_id=WP_012174703.1;transl_table=11 NC_009943.1 RefSeq gene 1532741 1533904 . + . ID=gene-DOLE_RS06565;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=DOLE_RS06565;old_locus_tag=Dole_1281 NC_009943.1 Protein Homology CDS 1532741 1533904 . + 0 ID=cds-WP_012174704.1;Parent=gene-DOLE_RS06565;Dbxref=Genbank:WP_012174704.1;Name=WP_012174704.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011187270.1;locus_tag=DOLE_RS06565;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_012174704.1;transl_table=11 NC_009943.1 RefSeq gene 1533904 1534866 . + . ID=gene-DOLE_RS06570;Name=DOLE_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06570;old_locus_tag=Dole_1282 NC_009943.1 Protein Homology CDS 1533904 1534866 . + 0 ID=cds-WP_012174705.1;Parent=gene-DOLE_RS06570;Dbxref=Genbank:WP_012174705.1;Name=WP_012174705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404630.1;locus_tag=DOLE_RS06570;product=GDP-L-fucose synthase;protein_id=WP_012174705.1;transl_table=11 NC_009943.1 RefSeq gene 1535021 1535599 . + . ID=gene-DOLE_RS06575;Name=DOLE_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06575;old_locus_tag=Dole_1283 NC_009943.1 Protein Homology CDS 1535021 1535599 . + 0 ID=cds-WP_012174706.1;Parent=gene-DOLE_RS06575;Dbxref=Genbank:WP_012174706.1;Name=WP_012174706.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024804.2;locus_tag=DOLE_RS06575;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_012174706.1;transl_table=11 NC_009943.1 RefSeq gene 1535801 1536598 . + . ID=gene-DOLE_RS06580;Name=DOLE_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06580;old_locus_tag=Dole_1284 NC_009943.1 Protein Homology CDS 1535801 1536598 . + 0 ID=cds-WP_012174707.1;Parent=gene-DOLE_RS06580;Dbxref=Genbank:WP_012174707.1;Name=WP_012174707.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013245.2;locus_tag=DOLE_RS06580;product=ABC transporter permease;protein_id=WP_012174707.1;transl_table=11 NC_009943.1 RefSeq gene 1536626 1537366 . + . ID=gene-DOLE_RS06585;Name=DOLE_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06585;old_locus_tag=Dole_1285 NC_009943.1 Protein Homology CDS 1536626 1537366 . + 0 ID=cds-WP_232362733.1;Parent=gene-DOLE_RS06585;Dbxref=Genbank:WP_232362733.1;Name=WP_232362733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723271.1;locus_tag=DOLE_RS06585;product=ABC transporter ATP-binding protein;protein_id=WP_232362733.1;transl_table=11 NC_009943.1 RefSeq gene 1537403 1538191 . + . ID=gene-DOLE_RS06590;Name=DOLE_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06590;old_locus_tag=Dole_1286 NC_009943.1 Protein Homology CDS 1537403 1538191 . + 0 ID=cds-WP_012174709.1;Parent=gene-DOLE_RS06590;Dbxref=Genbank:WP_012174709.1;Name=WP_012174709.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012888.2;locus_tag=DOLE_RS06590;product=sulfotransferase;protein_id=WP_012174709.1;transl_table=11 NC_009943.1 RefSeq gene 1538520 1539806 . + . ID=gene-DOLE_RS06595;Name=DOLE_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06595;old_locus_tag=Dole_1287 NC_009943.1 Protein Homology CDS 1538520 1539806 . + 0 ID=cds-WP_041280409.1;Parent=gene-DOLE_RS06595;Dbxref=Genbank:WP_041280409.1;Name=WP_041280409.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016464.2;locus_tag=DOLE_RS06595;product=glycosyltransferase family 61 protein;protein_id=WP_041280409.1;transl_table=11 NC_009943.1 RefSeq gene 1539803 1540555 . + . ID=gene-DOLE_RS06600;Name=DOLE_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06600;old_locus_tag=Dole_1288 NC_009943.1 Protein Homology CDS 1539803 1540555 . + 0 ID=cds-WP_012174711.1;Parent=gene-DOLE_RS06600;Dbxref=Genbank:WP_012174711.1;Name=WP_012174711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.2;locus_tag=DOLE_RS06600;product=N-acetyltransferase;protein_id=WP_012174711.1;transl_table=11 NC_009943.1 RefSeq gene 1540631 1541047 . + . ID=gene-DOLE_RS06605;Name=DOLE_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06605;old_locus_tag=Dole_1289 NC_009943.1 Protein Homology CDS 1540631 1541047 . + 0 ID=cds-WP_012174712.1;Parent=gene-DOLE_RS06605;Dbxref=Genbank:WP_012174712.1;Name=WP_012174712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017345.2;locus_tag=DOLE_RS06605;product=FdtA/QdtA family cupin domain-containing protein;protein_id=WP_012174712.1;transl_table=11 NC_009943.1 RefSeq gene 1541044 1542162 . + . ID=gene-DOLE_RS06610;Name=DOLE_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06610;old_locus_tag=Dole_1290 NC_009943.1 Protein Homology CDS 1541044 1542162 . + 0 ID=cds-WP_012174713.1;Parent=gene-DOLE_RS06610;Dbxref=Genbank:WP_012174713.1;Name=WP_012174713.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013227.2;locus_tag=DOLE_RS06610;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_012174713.1;transl_table=11 NC_009943.1 RefSeq gene 1542159 1543517 . + . ID=gene-DOLE_RS06615;Name=DOLE_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06615;old_locus_tag=Dole_1291 NC_009943.1 GeneMarkS-2+ CDS 1542159 1543517 . + 0 ID=cds-WP_012174714.1;Parent=gene-DOLE_RS06615;Dbxref=Genbank:WP_012174714.1;Name=WP_012174714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06615;product=hypothetical protein;protein_id=WP_012174714.1;transl_table=11 NC_009943.1 RefSeq gene 1543560 1544258 . + . ID=gene-DOLE_RS06620;Name=DOLE_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06620;old_locus_tag=Dole_1292 NC_009943.1 Protein Homology CDS 1543560 1544258 . + 0 ID=cds-WP_012174715.1;Parent=gene-DOLE_RS06620;Dbxref=Genbank:WP_012174715.1;Name=WP_012174715.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=DOLE_RS06620;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012174715.1;transl_table=11 NC_009943.1 RefSeq gene 1544242 1545213 . + . ID=gene-DOLE_RS06625;Name=DOLE_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06625;old_locus_tag=Dole_1293 NC_009943.1 Protein Homology CDS 1544242 1545213 . + 0 ID=cds-WP_012174716.1;Parent=gene-DOLE_RS06625;Dbxref=Genbank:WP_012174716.1;Name=WP_012174716.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS06625;product=glycosyltransferase family 2 protein;protein_id=WP_012174716.1;transl_table=11 NC_009943.1 RefSeq gene 1545210 1545470 . + . ID=gene-DOLE_RS06630;Name=DOLE_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06630;old_locus_tag=Dole_1294 NC_009943.1 GeneMarkS-2+ CDS 1545210 1545470 . + 0 ID=cds-WP_012174717.1;Parent=gene-DOLE_RS06630;Dbxref=Genbank:WP_012174717.1;Name=WP_012174717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06630;product=hypothetical protein;protein_id=WP_012174717.1;transl_table=11 NC_009943.1 RefSeq gene 1545502 1547070 . + . ID=gene-DOLE_RS06635;Name=DOLE_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06635;old_locus_tag=Dole_1295 NC_009943.1 Protein Homology CDS 1545502 1547070 . + 0 ID=cds-WP_012174718.1;Parent=gene-DOLE_RS06635;Dbxref=Genbank:WP_012174718.1;Name=WP_012174718.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025072.2;locus_tag=DOLE_RS06635;product=glycosyltransferase;protein_id=WP_012174718.1;transl_table=11 NC_009943.1 RefSeq gene 1547055 1548086 . + . ID=gene-DOLE_RS06640;Name=DOLE_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06640;old_locus_tag=Dole_1296 NC_009943.1 Protein Homology CDS 1547055 1548086 . + 0 ID=cds-WP_012174719.1;Parent=gene-DOLE_RS06640;Dbxref=Genbank:WP_012174719.1;Name=WP_012174719.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021616.2;locus_tag=DOLE_RS06640;product=glycosyltransferase;protein_id=WP_012174719.1;transl_table=11 NC_009943.1 RefSeq gene 1548127 1549587 . + . ID=gene-DOLE_RS17180;Name=DOLE_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17180;old_locus_tag=Dole_1297 NC_009943.1 GeneMarkS-2+ CDS 1548127 1549587 . + 0 ID=cds-WP_012174720.1;Parent=gene-DOLE_RS17180;Dbxref=Genbank:WP_012174720.1;Name=WP_012174720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17180;product=glycosyltransferase family 4 protein;protein_id=WP_012174720.1;transl_table=11 NC_009943.1 RefSeq gene 1549620 1550489 . + . ID=gene-DOLE_RS06650;Name=DOLE_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06650;old_locus_tag=Dole_1298 NC_009943.1 Protein Homology CDS 1549620 1550489 . + 0 ID=cds-WP_012174721.1;Parent=gene-DOLE_RS06650;Dbxref=Genbank:WP_012174721.1;Name=WP_012174721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=DOLE_RS06650;product=glycosyltransferase family 2 protein;protein_id=WP_012174721.1;transl_table=11 NC_009943.1 RefSeq gene 1550872 1551858 . + . ID=gene-DOLE_RS06655;Name=DOLE_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06655;old_locus_tag=Dole_1299 NC_009943.1 Protein Homology CDS 1550872 1551858 . + 0 ID=cds-WP_012174722.1;Parent=gene-DOLE_RS06655;Dbxref=Genbank:WP_012174722.1;Name=WP_012174722.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF027681.2;locus_tag=DOLE_RS06655;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012174722.1;transl_table=11 NC_009943.1 RefSeq gene 1551892 1553016 . + . ID=gene-DOLE_RS06660;Name=DOLE_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06660;old_locus_tag=Dole_1300 NC_009943.1 Protein Homology CDS 1551892 1553016 . + 0 ID=cds-WP_012174723.1;Parent=gene-DOLE_RS06660;Dbxref=Genbank:WP_012174723.1;Name=WP_012174723.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=DOLE_RS06660;product=acyltransferase;protein_id=WP_012174723.1;transl_table=11 NC_009943.1 RefSeq gene 1553039 1554043 . + . ID=gene-DOLE_RS06665;Name=DOLE_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06665;old_locus_tag=Dole_1301 NC_009943.1 Protein Homology CDS 1553039 1554043 . + 0 ID=cds-WP_012174724.1;Parent=gene-DOLE_RS06665;Dbxref=Genbank:WP_012174724.1;Name=WP_012174724.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013146.2;locus_tag=DOLE_RS06665;product=glycosyltransferase family 4 protein;protein_id=WP_012174724.1;transl_table=11 NC_009943.1 RefSeq gene 1554040 1555107 . + . ID=gene-DOLE_RS06670;Name=DOLE_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06670;old_locus_tag=Dole_1302 NC_009943.1 Protein Homology CDS 1554040 1555107 . + 0 ID=cds-WP_012174725.1;Parent=gene-DOLE_RS06670;Dbxref=Genbank:WP_012174725.1;Name=WP_012174725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610789.1;locus_tag=DOLE_RS06670;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_012174725.1;transl_table=11 NC_009943.1 RefSeq gene 1555136 1556323 . + . ID=gene-DOLE_RS06675;Name=DOLE_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06675;old_locus_tag=Dole_1303 NC_009943.1 Protein Homology CDS 1555136 1556323 . + 0 ID=cds-WP_012174726.1;Parent=gene-DOLE_RS06675;Dbxref=Genbank:WP_012174726.1;Name=WP_012174726.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956342.1;locus_tag=DOLE_RS06675;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012174726.1;transl_table=11 NC_009943.1 RefSeq gene 1556524 1556877 . + . ID=gene-DOLE_RS06680;Name=DOLE_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06680;old_locus_tag=Dole_1304 NC_009943.1 GeneMarkS-2+ CDS 1556524 1556877 . + 0 ID=cds-WP_153304376.1;Parent=gene-DOLE_RS06680;Dbxref=Genbank:WP_153304376.1;Name=WP_153304376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06680;product=hypothetical protein;protein_id=WP_153304376.1;transl_table=11 NC_009943.1 RefSeq gene 1557362 1559176 . + . ID=gene-DOLE_RS06685;Name=DOLE_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06685;old_locus_tag=Dole_1305 NC_009943.1 Protein Homology CDS 1557362 1559176 . + 0 ID=cds-WP_012174728.1;Parent=gene-DOLE_RS06685;Dbxref=Genbank:WP_012174728.1;Name=WP_012174728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610602.1;locus_tag=DOLE_RS06685;product=acyl-CoA dehydrogenase;protein_id=WP_012174728.1;transl_table=11 NC_009943.1 RefSeq gene 1559280 1560389 . + . ID=gene-DOLE_RS06690;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=DOLE_RS06690;old_locus_tag=Dole_1306 NC_009943.1 Protein Homology CDS 1559280 1560389 . + 0 ID=cds-WP_012174729.1;Parent=gene-DOLE_RS06690;Dbxref=Genbank:WP_012174729.1;Name=WP_012174729.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174729.1;locus_tag=DOLE_RS06690;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_012174729.1;transl_table=11 NC_009943.1 RefSeq gene 1560483 1560761 . + . ID=gene-DOLE_RS06695;Name=DOLE_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06695;old_locus_tag=Dole_1307 NC_009943.1 GeneMarkS-2+ CDS 1560483 1560761 . + 0 ID=cds-WP_012174730.1;Parent=gene-DOLE_RS06695;Dbxref=Genbank:WP_012174730.1;Name=WP_012174730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06695;product=hypothetical protein;protein_id=WP_012174730.1;transl_table=11 NC_009943.1 RefSeq gene 1560835 1562025 . - . ID=gene-DOLE_RS06700;Name=DOLE_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06700;old_locus_tag=Dole_1308 NC_009943.1 Protein Homology CDS 1560835 1562025 . - 0 ID=cds-WP_012174731.1;Parent=gene-DOLE_RS06700;Dbxref=Genbank:WP_012174731.1;Name=WP_012174731.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015948.2;locus_tag=DOLE_RS06700;product=DUF362 domain-containing protein;protein_id=WP_012174731.1;transl_table=11 NC_009943.1 RefSeq gene 1562071 1562502 . - . ID=gene-DOLE_RS06705;Name=DOLE_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06705;old_locus_tag=Dole_1309 NC_009943.1 Protein Homology CDS 1562071 1562502 . - 0 ID=cds-WP_012174732.1;Parent=gene-DOLE_RS06705;Dbxref=Genbank:WP_012174732.1;Name=WP_012174732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725969.1;locus_tag=DOLE_RS06705;product=hypothetical protein;protein_id=WP_012174732.1;transl_table=11 NC_009943.1 RefSeq gene 1562542 1563111 . - . ID=gene-DOLE_RS06710;Name=DOLE_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06710;old_locus_tag=Dole_1310 NC_009943.1 GeneMarkS-2+ CDS 1562542 1563111 . - 0 ID=cds-WP_012174733.1;Parent=gene-DOLE_RS06710;Dbxref=Genbank:WP_012174733.1;Name=WP_012174733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06710;product=hypothetical protein;protein_id=WP_012174733.1;transl_table=11 NC_009943.1 RefSeq gene 1563394 1564323 . + . ID=gene-DOLE_RS06715;Name=DOLE_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06715;old_locus_tag=Dole_1311 NC_009943.1 GeneMarkS-2+ CDS 1563394 1564323 . + 0 ID=cds-WP_153304377.1;Parent=gene-DOLE_RS06715;Dbxref=Genbank:WP_153304377.1;Name=WP_153304377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06715;product=hypothetical protein;protein_id=WP_153304377.1;transl_table=11 NC_009943.1 RefSeq gene 1564618 1566138 . - . ID=gene-DOLE_RS06725;Name=DOLE_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06725;old_locus_tag=Dole_1312 NC_009943.1 GeneMarkS-2+ CDS 1564618 1566138 . - 0 ID=cds-WP_012174735.1;Parent=gene-DOLE_RS06725;Dbxref=Genbank:WP_012174735.1;Name=WP_012174735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06725;product=hypothetical protein;protein_id=WP_012174735.1;transl_table=11 NC_009943.1 RefSeq gene 1566326 1567021 . + . ID=gene-DOLE_RS06735;Name=DOLE_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06735;old_locus_tag=Dole_1313 NC_009943.1 Protein Homology CDS 1566326 1567021 . + 0 ID=cds-WP_012174736.1;Parent=gene-DOLE_RS06735;Dbxref=Genbank:WP_012174736.1;Name=WP_012174736.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS06735;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012174736.1;transl_table=11 NC_009943.1 RefSeq gene 1567053 1567559 . + . ID=gene-DOLE_RS17185;Name=DOLE_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17185 NC_009943.1 GeneMarkS-2+ CDS 1567053 1567559 . + 0 ID=cds-WP_052294263.1;Parent=gene-DOLE_RS17185;Dbxref=Genbank:WP_052294263.1;Name=WP_052294263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17185;product=hypothetical protein;protein_id=WP_052294263.1;transl_table=11 NC_009943.1 RefSeq gene 1567578 1567940 . + . ID=gene-DOLE_RS17190;Name=DOLE_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17190 NC_009943.1 GeneMarkS-2+ CDS 1567578 1567940 . + 0 ID=cds-WP_052294264.1;Parent=gene-DOLE_RS17190;Dbxref=Genbank:WP_052294264.1;Name=WP_052294264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17190;product=hypothetical protein;protein_id=WP_052294264.1;transl_table=11 NC_009943.1 RefSeq gene 1568007 1569242 . + . ID=gene-DOLE_RS06745;Name=DOLE_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06745;old_locus_tag=Dole_1316 NC_009943.1 Protein Homology CDS 1568007 1569242 . + 0 ID=cds-WP_012174737.1;Parent=gene-DOLE_RS06745;Dbxref=Genbank:WP_012174737.1;Name=WP_012174737.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014774.2;locus_tag=DOLE_RS06745;product=(Fe-S)-binding protein;protein_id=WP_012174737.1;transl_table=11 NC_009943.1 RefSeq gene 1569330 1570175 . - . ID=gene-DOLE_RS06750;Name=DOLE_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06750;old_locus_tag=Dole_1317 NC_009943.1 GeneMarkS-2+ CDS 1569330 1570175 . - 0 ID=cds-WP_012174738.1;Parent=gene-DOLE_RS06750;Dbxref=Genbank:WP_012174738.1;Name=WP_012174738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06750;product=hypothetical protein;protein_id=WP_012174738.1;transl_table=11 NC_009943.1 RefSeq gene 1570398 1571414 . - . ID=gene-DOLE_RS06755;Name=DOLE_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06755;old_locus_tag=Dole_1318 NC_009943.1 Protein Homology CDS 1570398 1571414 . - 0 ID=cds-WP_012174739.1;Parent=gene-DOLE_RS06755;Dbxref=Genbank:WP_012174739.1;Name=WP_012174739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013972.2;locus_tag=DOLE_RS06755;product=START domain-containing protein;protein_id=WP_012174739.1;transl_table=11 NC_009943.1 RefSeq gene 1571618 1572022 . - . ID=gene-DOLE_RS06760;Name=DOLE_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06760;old_locus_tag=Dole_1319 NC_009943.1 Protein Homology CDS 1571618 1572022 . - 0 ID=cds-WP_232362734.1;Parent=gene-DOLE_RS06760;Dbxref=Genbank:WP_232362734.1;Name=WP_232362734.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025279.2;locus_tag=DOLE_RS06760;product=peroxiredoxin-like family protein;protein_id=WP_232362734.1;transl_table=11 NC_009943.1 RefSeq gene 1572053 1572193 . - . ID=gene-DOLE_RS18175;Name=DOLE_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18175 NC_009943.1 GeneMarkS-2+ CDS 1572053 1572193 . - 0 ID=cds-WP_153304378.1;Parent=gene-DOLE_RS18175;Dbxref=Genbank:WP_153304378.1;Name=WP_153304378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18175;product=hypothetical protein;protein_id=WP_153304378.1;transl_table=11 NC_009943.1 RefSeq gene 1572524 1573897 . - . ID=gene-DOLE_RS17195;Name=DOLE_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17195;old_locus_tag=Dole_1320 NC_009943.1 Protein Homology CDS 1572524 1573897 . - 0 ID=cds-WP_012174741.1;Parent=gene-DOLE_RS17195;Dbxref=Genbank:WP_012174741.1;Name=WP_012174741.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS17195;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_012174741.1;transl_table=11 NC_009943.1 RefSeq gene 1574095 1574799 . - . ID=gene-DOLE_RS06780;Name=DOLE_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06780;old_locus_tag=Dole_1321 NC_009943.1 Protein Homology CDS 1574095 1574799 . - 0 ID=cds-WP_012174742.1;Parent=gene-DOLE_RS06780;Dbxref=Genbank:WP_012174742.1;Name=WP_012174742.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS06780;product=response regulator;protein_id=WP_012174742.1;transl_table=11 NC_009943.1 RefSeq gene 1574838 1577348 . - . ID=gene-DOLE_RS06785;Name=DOLE_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06785;old_locus_tag=Dole_1322 NC_009943.1 Protein Homology CDS 1574838 1577348 . - 0 ID=cds-WP_153304379.1;Parent=gene-DOLE_RS06785;Dbxref=Genbank:WP_153304379.1;Name=WP_153304379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405505.1;locus_tag=DOLE_RS06785;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_153304379.1;transl_table=11 NC_009943.1 RefSeq gene 1577579 1578202 . - . ID=gene-DOLE_RS06790;Name=DOLE_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06790;old_locus_tag=Dole_1323 NC_009943.1 Protein Homology CDS 1577579 1578202 . - 0 ID=cds-WP_012174744.1;Parent=gene-DOLE_RS06790;Dbxref=Genbank:WP_012174744.1;Name=WP_012174744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948896.1;locus_tag=DOLE_RS06790;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012174744.1;transl_table=11 NC_009943.1 RefSeq gene 1578372 1579595 . + . ID=gene-DOLE_RS06795;Name=DOLE_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06795;old_locus_tag=Dole_1324 NC_009943.1 Protein Homology CDS 1578372 1579595 . + 0 ID=cds-WP_012174745.1;Parent=gene-DOLE_RS06795;Dbxref=Genbank:WP_012174745.1;Name=WP_012174745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610601.1;locus_tag=DOLE_RS06795;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_012174745.1;transl_table=11 NC_009943.1 RefSeq gene 1579781 1580137 . + . ID=gene-DOLE_RS06800;Name=DOLE_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06800;old_locus_tag=Dole_1325 NC_009943.1 Protein Homology CDS 1579781 1580137 . + 0 ID=cds-WP_012174746.1;Parent=gene-DOLE_RS06800;Dbxref=Genbank:WP_012174746.1;Name=WP_012174746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948895.1;locus_tag=DOLE_RS06800;product=hypothetical protein;protein_id=WP_012174746.1;transl_table=11 NC_009943.1 RefSeq gene 1580200 1581873 . + . ID=gene-DOLE_RS06805;Name=DOLE_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06805;old_locus_tag=Dole_1326 NC_009943.1 Protein Homology CDS 1580200 1581873 . + 0 ID=cds-WP_012174747.1;Parent=gene-DOLE_RS06805;Dbxref=Genbank:WP_012174747.1;Name=WP_012174747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948894.1;locus_tag=DOLE_RS06805;product=thiamine pyrophosphate-binding protein;protein_id=WP_012174747.1;transl_table=11 NC_009943.1 RefSeq gene 1582163 1582462 . + . ID=gene-DOLE_RS06810;Name=DOLE_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06810;old_locus_tag=Dole_1327 NC_009943.1 GeneMarkS-2+ CDS 1582163 1582462 . + 0 ID=cds-WP_012174748.1;Parent=gene-DOLE_RS06810;Dbxref=Genbank:WP_012174748.1;Name=WP_012174748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06810;product=hypothetical protein;protein_id=WP_012174748.1;transl_table=11 NC_009943.1 RefSeq gene 1582623 1584188 . - . ID=gene-DOLE_RS06815;Name=DOLE_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06815;old_locus_tag=Dole_1328 NC_009943.1 Protein Homology CDS 1582623 1584188 . - 0 ID=cds-WP_012174749.1;Parent=gene-DOLE_RS06815;Dbxref=Genbank:WP_012174749.1;Name=WP_012174749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876750.1;locus_tag=DOLE_RS06815;product=bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein;protein_id=WP_012174749.1;transl_table=11 NC_009943.1 RefSeq gene 1584579 1585502 . + . ID=gene-DOLE_RS06820;Name=DOLE_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06820;old_locus_tag=Dole_1329 NC_009943.1 Protein Homology CDS 1584579 1585502 . + 0 ID=cds-WP_012174750.1;Parent=gene-DOLE_RS06820;Dbxref=Genbank:WP_012174750.1;Name=WP_012174750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174751.1;locus_tag=DOLE_RS06820;product=universal stress protein;protein_id=WP_012174750.1;transl_table=11 NC_009943.1 RefSeq gene 1585555 1586478 . + . ID=gene-DOLE_RS06825;Name=DOLE_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06825;old_locus_tag=Dole_1330 NC_009943.1 Protein Homology CDS 1585555 1586478 . + 0 ID=cds-WP_012174751.1;Parent=gene-DOLE_RS06825;Dbxref=Genbank:WP_012174751.1;Name=WP_012174751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174752.1;locus_tag=DOLE_RS06825;product=universal stress protein;protein_id=WP_012174751.1;transl_table=11 NC_009943.1 RefSeq gene 1586542 1587453 . + . ID=gene-DOLE_RS06830;Name=DOLE_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06830;old_locus_tag=Dole_1331 NC_009943.1 Protein Homology CDS 1586542 1587453 . + 0 ID=cds-WP_012174752.1;Parent=gene-DOLE_RS06830;Dbxref=Genbank:WP_012174752.1;Name=WP_012174752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174751.1;locus_tag=DOLE_RS06830;product=universal stress protein;protein_id=WP_012174752.1;transl_table=11 NC_009943.1 RefSeq gene 1587677 1588495 . - . ID=gene-DOLE_RS17200;Name=DOLE_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17200;old_locus_tag=Dole_1332 NC_009943.1 Protein Homology CDS 1587677 1588495 . - 0 ID=cds-WP_012174753.1;Parent=gene-DOLE_RS17200;Dbxref=Genbank:WP_012174753.1;Name=WP_012174753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016131.2;locus_tag=DOLE_RS17200;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_012174753.1;transl_table=11 NC_009943.1 RefSeq gene 1588533 1589312 . - . ID=gene-DOLE_RS06840;Name=DOLE_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06840;old_locus_tag=Dole_1333 NC_009943.1 Protein Homology CDS 1588533 1589312 . - 0 ID=cds-WP_012174754.1;Parent=gene-DOLE_RS06840;Dbxref=Genbank:WP_012174754.1;Name=WP_012174754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024644.2;locus_tag=DOLE_RS06840;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012174754.1;transl_table=11 NC_009943.1 RefSeq gene 1589324 1592464 . - . ID=gene-DOLE_RS06845;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=DOLE_RS06845;old_locus_tag=Dole_1334 NC_009943.1 Protein Homology CDS 1589324 1592464 . - 0 ID=cds-WP_083766545.1;Parent=gene-DOLE_RS06845;Dbxref=Genbank:WP_083766545.1;Name=WP_083766545.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013909299.1;locus_tag=DOLE_RS06845;product=formate dehydrogenase-N subunit alpha;protein_id=WP_083766545.1;transl_except=(pos:complement(1591895..1591897)%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 1592467 1593246 . - . ID=gene-DOLE_RS06855;Name=DOLE_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06855;old_locus_tag=Dole_1336 NC_009943.1 Protein Homology CDS 1592467 1593246 . - 0 ID=cds-WP_012174757.1;Parent=gene-DOLE_RS06855;Dbxref=Genbank:WP_012174757.1;Name=WP_012174757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024587.2;locus_tag=DOLE_RS06855;product=cytidylate kinase-like family protein;protein_id=WP_012174757.1;transl_table=11 NC_009943.1 RefSeq gene 1593271 1593855 . - . ID=gene-DOLE_RS06860;Name=DOLE_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06860;old_locus_tag=Dole_1337 NC_009943.1 Protein Homology CDS 1593271 1593855 . - 0 ID=cds-WP_012174758.1;Parent=gene-DOLE_RS06860;Dbxref=Genbank:WP_012174758.1;Name=WP_012174758.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012780.2;locus_tag=DOLE_RS06860;product=CBS domain-containing protein;protein_id=WP_012174758.1;transl_table=11 NC_009943.1 RefSeq gene 1593913 1595646 . - . ID=gene-DOLE_RS06865;Name=DOLE_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06865;old_locus_tag=Dole_1338 NC_009943.1 Protein Homology CDS 1593913 1595646 . - 0 ID=cds-WP_012174759.1;Parent=gene-DOLE_RS06865;Dbxref=Genbank:WP_012174759.1;Name=WP_012174759.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014135.2;locus_tag=DOLE_RS06865;product=SLC13 family permease;protein_id=WP_012174759.1;transl_table=11 NC_009943.1 RefSeq gene 1596023 1597009 . - . ID=gene-DOLE_RS17205;Name=DOLE_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17205;old_locus_tag=Dole_1339 NC_009943.1 Protein Homology CDS 1596023 1597009 . - 0 ID=cds-WP_012174760.1;Parent=gene-DOLE_RS17205;Dbxref=Genbank:WP_012174760.1;Name=WP_012174760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS17205;product=PAS domain S-box protein;protein_id=WP_012174760.1;transl_table=11 NC_009943.1 RefSeq gene 1597069 1597491 . - . ID=gene-DOLE_RS06875;Name=DOLE_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06875;old_locus_tag=Dole_1340 NC_009943.1 Protein Homology CDS 1597069 1597491 . - 0 ID=cds-WP_012174761.1;Parent=gene-DOLE_RS06875;Dbxref=Genbank:WP_012174761.1;Name=WP_012174761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS06875;product=PilZ domain-containing protein;protein_id=WP_012174761.1;transl_table=11 NC_009943.1 RefSeq gene 1597550 1598455 . - . ID=gene-DOLE_RS06880;Name=DOLE_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06880;old_locus_tag=Dole_1341 NC_009943.1 Protein Homology CDS 1597550 1598455 . - 0 ID=cds-WP_012174762.1;Parent=gene-DOLE_RS06880;Dbxref=Genbank:WP_012174762.1;Name=WP_012174762.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957426.1;locus_tag=DOLE_RS06880;product=response regulator;protein_id=WP_012174762.1;transl_table=11 NC_009943.1 RefSeq gene 1598501 1599019 . - . ID=gene-DOLE_RS06885;Name=DOLE_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06885;old_locus_tag=Dole_1342 NC_009943.1 Protein Homology CDS 1598501 1599019 . - 0 ID=cds-WP_012174763.1;Parent=gene-DOLE_RS06885;Dbxref=Genbank:WP_012174763.1;Name=WP_012174763.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016764.2;locus_tag=DOLE_RS06885;product=YIP1 family protein;protein_id=WP_012174763.1;transl_table=11 NC_009943.1 RefSeq gene 1599028 1599174 . - . ID=gene-DOLE_RS18425;Name=DOLE_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18425 NC_009943.1 Protein Homology CDS 1599028 1599174 . - 0 ID=cds-WP_167320855.1;Parent=gene-DOLE_RS18425;Dbxref=Genbank:WP_167320855.1;Name=WP_167320855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587358.1;locus_tag=DOLE_RS18425;product=hypothetical protein;protein_id=WP_167320855.1;transl_table=11 NC_009943.1 RefSeq gene 1599201 1601057 . - . ID=gene-DOLE_RS06890;Name=DOLE_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06890;old_locus_tag=Dole_1343 NC_009943.1 Protein Homology CDS 1599201 1601057 . - 0 ID=cds-WP_012174764.1;Parent=gene-DOLE_RS06890;Dbxref=Genbank:WP_012174764.1;Name=WP_012174764.1;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876377.1;locus_tag=DOLE_RS06890;product=DASS family sodium-coupled anion symporter;protein_id=WP_012174764.1;transl_table=11 NC_009943.1 RefSeq gene 1601136 1602815 . - . ID=gene-DOLE_RS06895;Name=DOLE_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06895;old_locus_tag=Dole_1344 NC_009943.1 Protein Homology CDS 1601136 1602815 . - 0 ID=cds-WP_167320856.1;Parent=gene-DOLE_RS06895;Dbxref=Genbank:WP_167320856.1;Name=WP_167320856.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS06895;product=PAS domain-containing sensor histidine kinase;protein_id=WP_167320856.1;transl_table=11 NC_009943.1 RefSeq gene 1602871 1603290 . - . ID=gene-DOLE_RS06900;Name=DOLE_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06900;old_locus_tag=Dole_1345 NC_009943.1 Protein Homology CDS 1602871 1603290 . - 0 ID=cds-WP_012174766.1;Parent=gene-DOLE_RS06900;Dbxref=Genbank:WP_012174766.1;Name=WP_012174766.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS06900;product=response regulator;protein_id=WP_012174766.1;transl_table=11 NC_009943.1 RefSeq gene 1603274 1603558 . - . ID=gene-DOLE_RS06905;Name=DOLE_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06905 NC_009943.1 GeneMarkS-2+ CDS 1603274 1603558 . - 0 ID=cds-WP_041280417.1;Parent=gene-DOLE_RS06905;Dbxref=Genbank:WP_041280417.1;Name=WP_041280417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS06905;product=hypothetical protein;protein_id=WP_041280417.1;transl_table=11 NC_009943.1 RefSeq gene 1603838 1605904 . + . ID=gene-DOLE_RS06910;Name=DOLE_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06910;old_locus_tag=Dole_1347 NC_009943.1 Protein Homology CDS 1603838 1605904 . + 0 ID=cds-WP_012174768.1;Parent=gene-DOLE_RS06910;Dbxref=Genbank:WP_012174768.1;Name=WP_012174768.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957420.1;locus_tag=DOLE_RS06910;product=SLC13 family permease;protein_id=WP_012174768.1;transl_table=11 NC_009943.1 RefSeq gene 1605947 1606450 . + . ID=gene-DOLE_RS06915;Name=DOLE_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06915;old_locus_tag=Dole_1348 NC_009943.1 Protein Homology CDS 1605947 1606450 . + 0 ID=cds-WP_232362735.1;Parent=gene-DOLE_RS06915;Dbxref=Genbank:WP_232362735.1;Name=WP_232362735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174783.1;locus_tag=DOLE_RS06915;product=response regulator;protein_id=WP_232362735.1;transl_table=11 NC_009943.1 RefSeq gene 1606468 1608132 . + . ID=gene-DOLE_RS06920;Name=DOLE_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06920;old_locus_tag=Dole_1349 NC_009943.1 Protein Homology CDS 1606468 1608132 . + 0 ID=cds-WP_012174770.1;Parent=gene-DOLE_RS06920;Dbxref=Genbank:WP_012174770.1;Name=WP_012174770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905629.1;locus_tag=DOLE_RS06920;product=PAS domain-containing sensor histidine kinase;protein_id=WP_012174770.1;transl_table=11 NC_009943.1 RefSeq gene 1608219 1608662 . + . ID=gene-DOLE_RS06925;Name=DOLE_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06925;old_locus_tag=Dole_1350 NC_009943.1 Protein Homology CDS 1608219 1608662 . + 0 ID=cds-WP_012174771.1;Parent=gene-DOLE_RS06925;Dbxref=Genbank:WP_012174771.1;Name=WP_012174771.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957437.1;locus_tag=DOLE_RS06925;product=response regulator;protein_id=WP_012174771.1;transl_table=11 NC_009943.1 RefSeq gene 1608953 1609378 . + . ID=gene-DOLE_RS06930;Name=DOLE_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06930;old_locus_tag=Dole_1351 NC_009943.1 Protein Homology CDS 1608953 1609378 . + 0 ID=cds-WP_012174772.1;Parent=gene-DOLE_RS06930;Dbxref=Genbank:WP_012174772.1;Name=WP_012174772.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174778.1;locus_tag=DOLE_RS06930;product=response regulator;protein_id=WP_012174772.1;transl_table=11 NC_009943.1 RefSeq gene 1609449 1609868 . + . ID=gene-DOLE_RS06935;Name=DOLE_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06935;old_locus_tag=Dole_1352 NC_009943.1 Protein Homology CDS 1609449 1609868 . + 0 ID=cds-WP_012174773.1;Parent=gene-DOLE_RS06935;Dbxref=Genbank:WP_012174773.1;Name=WP_012174773.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957433.1;locus_tag=DOLE_RS06935;product=response regulator;protein_id=WP_012174773.1;transl_table=11 NC_009943.1 RefSeq gene 1609905 1611188 . + . ID=gene-DOLE_RS06940;Name=DOLE_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06940;old_locus_tag=Dole_1353 NC_009943.1 Protein Homology CDS 1609905 1611188 . + 0 ID=cds-WP_012174774.1;Parent=gene-DOLE_RS06940;Dbxref=Genbank:WP_012174774.1;Name=WP_012174774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905619.1;locus_tag=DOLE_RS06940;product=sulfite exporter TauE/SafE family protein;protein_id=WP_012174774.1;transl_table=11 NC_009943.1 RefSeq gene 1611193 1611882 . + . ID=gene-DOLE_RS06945;Name=DOLE_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06945;old_locus_tag=Dole_1354 NC_009943.1 Protein Homology CDS 1611193 1611882 . + 0 ID=cds-WP_012174775.1;Parent=gene-DOLE_RS06945;Dbxref=Genbank:WP_012174775.1;Name=WP_012174775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070434.1;locus_tag=DOLE_RS06945;product=hypothetical protein;protein_id=WP_012174775.1;transl_table=11 NC_009943.1 RefSeq gene 1612235 1614847 . + . ID=gene-DOLE_RS06950;Name=DOLE_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06950;old_locus_tag=Dole_1355 NC_009943.1 Protein Homology CDS 1612235 1614847 . + 0 ID=cds-WP_012174776.1;Parent=gene-DOLE_RS06950;Dbxref=Genbank:WP_012174776.1;Name=WP_012174776.1;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070433.1;locus_tag=DOLE_RS06950;product=PEP-utilizing enzyme;protein_id=WP_012174776.1;transl_table=11 NC_009943.1 RefSeq gene 1615010 1616785 . + . ID=gene-DOLE_RS06955;Name=DOLE_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06955;old_locus_tag=Dole_1356 NC_009943.1 Protein Homology CDS 1615010 1616785 . + 0 ID=cds-WP_012174777.1;Parent=gene-DOLE_RS06955;Dbxref=Genbank:WP_012174777.1;Name=WP_012174777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877742.1;locus_tag=DOLE_RS06955;product=PAS domain-containing sensor histidine kinase;protein_id=WP_012174777.1;transl_table=11 NC_009943.1 RefSeq gene 1616868 1617302 . + . ID=gene-DOLE_RS06960;Name=DOLE_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06960;old_locus_tag=Dole_1357 NC_009943.1 Protein Homology CDS 1616868 1617302 . + 0 ID=cds-WP_012174778.1;Parent=gene-DOLE_RS06960;Dbxref=Genbank:WP_012174778.1;Name=WP_012174778.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876994.1;locus_tag=DOLE_RS06960;product=response regulator;protein_id=WP_012174778.1;transl_table=11 NC_009943.1 RefSeq gene 1617324 1617758 . + . ID=gene-DOLE_RS06965;Name=DOLE_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06965;old_locus_tag=Dole_1358 NC_009943.1 Protein Homology CDS 1617324 1617758 . + 0 ID=cds-WP_012174779.1;Parent=gene-DOLE_RS06965;Dbxref=Genbank:WP_012174779.1;Name=WP_012174779.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957434.1;locus_tag=DOLE_RS06965;product=response regulator;protein_id=WP_012174779.1;transl_table=11 NC_009943.1 RefSeq gene 1617778 1619382 . + . ID=gene-DOLE_RS06970;Name=DOLE_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06970;old_locus_tag=Dole_1359 NC_009943.1 Protein Homology CDS 1617778 1619382 . + 0 ID=cds-WP_012174780.1;Parent=gene-DOLE_RS06970;Dbxref=Genbank:WP_012174780.1;Name=WP_012174780.1;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957435.1;locus_tag=DOLE_RS06970;product=DASS family sodium-coupled anion symporter;protein_id=WP_012174780.1;transl_table=11 NC_009943.1 RefSeq gene 1619386 1620657 . + . ID=gene-DOLE_RS06975;Name=DOLE_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06975;old_locus_tag=Dole_1360 NC_009943.1 Protein Homology CDS 1619386 1620657 . + 0 ID=cds-WP_153304381.1;Parent=gene-DOLE_RS06975;Dbxref=Genbank:WP_153304381.1;Name=WP_153304381.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS06975;product=response regulator;protein_id=WP_153304381.1;transl_table=11 NC_009943.1 RefSeq gene 1620623 1621066 . + . ID=gene-DOLE_RS06980;Name=DOLE_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06980;old_locus_tag=Dole_1361 NC_009943.1 Protein Homology CDS 1620623 1621066 . + 0 ID=cds-WP_012174782.1;Parent=gene-DOLE_RS06980;Dbxref=Genbank:WP_012174782.1;Name=WP_012174782.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073738.1;locus_tag=DOLE_RS06980;product=response regulator;protein_id=WP_012174782.1;transl_table=11 NC_009943.1 RefSeq gene 1621120 1621599 . + . ID=gene-DOLE_RS06985;Name=DOLE_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06985;old_locus_tag=Dole_1362 NC_009943.1 Protein Homology CDS 1621120 1621599 . + 0 ID=cds-WP_012174783.1;Parent=gene-DOLE_RS06985;Dbxref=Genbank:WP_012174783.1;Name=WP_012174783.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957421.1;locus_tag=DOLE_RS06985;product=response regulator;protein_id=WP_012174783.1;transl_table=11 NC_009943.1 RefSeq gene 1621649 1622263 . + . ID=gene-DOLE_RS06990;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=DOLE_RS06990;old_locus_tag=Dole_1363 NC_009943.1 Protein Homology CDS 1621649 1622263 . + 0 ID=cds-WP_012174784.1;Parent=gene-DOLE_RS06990;Dbxref=Genbank:WP_012174784.1;Name=WP_012174784.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506138.1;locus_tag=DOLE_RS06990;product=adenylyl-sulfate kinase;protein_id=WP_012174784.1;transl_table=11 NC_009943.1 RefSeq gene 1622299 1623756 . - . ID=gene-DOLE_RS06995;Name=DOLE_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS06995;old_locus_tag=Dole_1364 NC_009943.1 Protein Homology CDS 1622299 1623756 . - 0 ID=cds-WP_012174785.1;Parent=gene-DOLE_RS06995;Dbxref=Genbank:WP_012174785.1;Name=WP_012174785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877981.1;locus_tag=DOLE_RS06995;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012174785.1;transl_table=11 NC_009943.1 RefSeq gene 1623753 1625243 . - . ID=gene-DOLE_RS07000;Name=DOLE_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07000;old_locus_tag=Dole_1365 NC_009943.1 Protein Homology CDS 1623753 1625243 . - 0 ID=cds-WP_012174786.1;Parent=gene-DOLE_RS07000;Dbxref=Genbank:WP_012174786.1;Name=WP_012174786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024140.2;locus_tag=DOLE_RS07000;product=ATP-binding protein;protein_id=WP_012174786.1;transl_table=11 NC_009943.1 RefSeq gene 1625296 1626138 . - . ID=gene-DOLE_RS07005;Name=DOLE_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07005;old_locus_tag=Dole_1366 NC_009943.1 Protein Homology CDS 1625296 1626138 . - 0 ID=cds-WP_012174787.1;Parent=gene-DOLE_RS07005;Dbxref=Genbank:WP_012174787.1;Name=WP_012174787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018884.2;locus_tag=DOLE_RS07005;product=protein phosphatase 2C domain-containing protein;protein_id=WP_012174787.1;transl_table=11 NC_009943.1 RefSeq gene 1626158 1628767 . - . ID=gene-DOLE_RS07010;Name=DOLE_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07010;old_locus_tag=Dole_1367 NC_009943.1 Protein Homology CDS 1626158 1628767 . - 0 ID=cds-WP_012174788.1;Parent=gene-DOLE_RS07010;Dbxref=Genbank:WP_012174788.1;Name=WP_012174788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947243.1;locus_tag=DOLE_RS07010;product=serine/threonine-protein kinase;protein_id=WP_012174788.1;transl_table=11 NC_009943.1 RefSeq gene 1628834 1629067 . + . ID=gene-DOLE_RS07015;Name=DOLE_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07015;old_locus_tag=Dole_1368 NC_009943.1 GeneMarkS-2+ CDS 1628834 1629067 . + 0 ID=cds-WP_041280418.1;Parent=gene-DOLE_RS07015;Dbxref=Genbank:WP_041280418.1;Name=WP_041280418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07015;product=hypothetical protein;protein_id=WP_041280418.1;transl_table=11 NC_009943.1 RefSeq gene 1629109 1630413 . + . ID=gene-DOLE_RS17210;Name=DOLE_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17210;old_locus_tag=Dole_1369 NC_009943.1 GeneMarkS-2+ CDS 1629109 1630413 . + 0 ID=cds-WP_052294266.1;Parent=gene-DOLE_RS17210;Dbxref=Genbank:WP_052294266.1;Name=WP_052294266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17210;product=hypothetical protein;protein_id=WP_052294266.1;transl_table=11 NC_009943.1 RefSeq gene 1630419 1631858 . - . ID=gene-DOLE_RS07025;Name=DOLE_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07025;old_locus_tag=Dole_1370 NC_009943.1 Protein Homology CDS 1630419 1631858 . - 0 ID=cds-WP_012174791.1;Parent=gene-DOLE_RS07025;Dbxref=Genbank:WP_012174791.1;Name=WP_012174791.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014443.2;locus_tag=DOLE_RS07025;product=TrkH family potassium uptake protein;protein_id=WP_012174791.1;transl_table=11 NC_009943.1 RefSeq gene 1631855 1632619 . - . ID=gene-DOLE_RS07030;Name=DOLE_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07030;old_locus_tag=Dole_1371 NC_009943.1 GeneMarkS-2+ CDS 1631855 1632619 . - 0 ID=cds-WP_012174792.1;Parent=gene-DOLE_RS07030;Dbxref=Genbank:WP_012174792.1;Name=WP_012174792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07030;product=HAMP domain-containing protein;protein_id=WP_012174792.1;transl_table=11 NC_009943.1 RefSeq gene 1632819 1633247 . - . ID=gene-DOLE_RS07035;Name=DOLE_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07035;old_locus_tag=Dole_1372 NC_009943.1 GeneMarkS-2+ CDS 1632819 1633247 . - 0 ID=cds-WP_041280419.1;Parent=gene-DOLE_RS07035;Dbxref=Genbank:WP_041280419.1;Name=WP_041280419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07035;product=hypothetical protein;protein_id=WP_041280419.1;transl_table=11 NC_009943.1 RefSeq gene 1633383 1633847 . + . ID=gene-DOLE_RS18430;Name=DOLE_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18430 NC_009943.1 GeneMarkS-2+ CDS 1633383 1633847 . + 0 ID=cds-WP_041280420.1;Parent=gene-DOLE_RS18430;Dbxref=Genbank:WP_041280420.1;Name=WP_041280420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18430;product=hypothetical protein;protein_id=WP_041280420.1;transl_table=11 NC_009943.1 RefSeq gene 1633829 1635541 . + . ID=gene-DOLE_RS07045;Name=DOLE_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07045;old_locus_tag=Dole_1373 NC_009943.1 Protein Homology CDS 1633829 1635541 . + 0 ID=cds-WP_041280421.1;Parent=gene-DOLE_RS07045;Dbxref=Genbank:WP_041280421.1;Name=WP_041280421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014661.2;locus_tag=DOLE_RS07045;product=YcaO-like family protein;protein_id=WP_041280421.1;transl_table=11 NC_009943.1 RefSeq gene 1635571 1637403 . - . ID=gene-DOLE_RS07050;Name=DOLE_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07050;old_locus_tag=Dole_1374 NC_009943.1 Protein Homology CDS 1635571 1637403 . - 0 ID=cds-WP_012174795.1;Parent=gene-DOLE_RS07050;Dbxref=Genbank:WP_012174795.1;Name=WP_012174795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904169.1;locus_tag=DOLE_RS07050;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_012174795.1;transl_table=11 NC_009943.1 RefSeq gene 1637582 1639546 . + . ID=gene-DOLE_RS07055;Name=DOLE_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07055;old_locus_tag=Dole_1375 NC_009943.1 GeneMarkS-2+ CDS 1637582 1639546 . + 0 ID=cds-WP_012174796.1;Parent=gene-DOLE_RS07055;Dbxref=Genbank:WP_012174796.1;Name=WP_012174796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07055;product=serine/threonine protein kinase;protein_id=WP_012174796.1;transl_table=11 NC_009943.1 RefSeq gene 1639543 1640331 . + . ID=gene-DOLE_RS07060;Name=DOLE_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07060;old_locus_tag=Dole_1376 NC_009943.1 GeneMarkS-2+ CDS 1639543 1640331 . + 0 ID=cds-WP_012174797.1;Parent=gene-DOLE_RS07060;Dbxref=Genbank:WP_012174797.1;Name=WP_012174797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07060;product=hypothetical protein;protein_id=WP_012174797.1;transl_table=11 NC_009943.1 RefSeq gene 1640362 1641468 . - . ID=gene-DOLE_RS17215;Name=DOLE_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17215;old_locus_tag=Dole_1377 NC_009943.1 Protein Homology CDS 1640362 1641468 . - 0 ID=cds-WP_012174798.1;Parent=gene-DOLE_RS17215;Dbxref=Genbank:WP_012174798.1;Name=WP_012174798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS17215;product=GGDEF domain-containing protein;protein_id=WP_012174798.1;transl_table=11 NC_009943.1 RefSeq gene 1641604 1641969 . - . ID=gene-DOLE_RS07070;Name=DOLE_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07070;old_locus_tag=Dole_1378 NC_009943.1 Protein Homology CDS 1641604 1641969 . - 0 ID=cds-WP_012174799.1;Parent=gene-DOLE_RS07070;Dbxref=Genbank:WP_012174799.1;Name=WP_012174799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610272.1;locus_tag=DOLE_RS07070;product=sulfite exporter TauE/SafE family protein;protein_id=WP_012174799.1;transl_table=11 NC_009943.1 RefSeq gene 1642015 1642218 . - . ID=gene-DOLE_RS07075;Name=DOLE_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07075;old_locus_tag=Dole_1379 NC_009943.1 Protein Homology CDS 1642015 1642218 . - 0 ID=cds-WP_012174800.1;Parent=gene-DOLE_RS07075;Dbxref=Genbank:WP_012174800.1;Name=WP_012174800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011189590.1;locus_tag=DOLE_RS07075;product=hypothetical protein;protein_id=WP_012174800.1;transl_table=11 NC_009943.1 RefSeq gene 1642234 1642938 . - . ID=gene-DOLE_RS07080;Name=DOLE_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07080;old_locus_tag=Dole_1380 NC_009943.1 Protein Homology CDS 1642234 1642938 . - 0 ID=cds-WP_012174801.1;Parent=gene-DOLE_RS07080;Dbxref=Genbank:WP_012174801.1;Name=WP_012174801.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965215.1;locus_tag=DOLE_RS07080;product=AAA family ATPase;protein_id=WP_012174801.1;transl_table=11 NC_009943.1 RefSeq gene 1643022 1643462 . - . ID=gene-DOLE_RS07085;Name=DOLE_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07085;old_locus_tag=Dole_1381 NC_009943.1 Protein Homology CDS 1643022 1643462 . - 0 ID=cds-WP_012174802.1;Parent=gene-DOLE_RS07085;Dbxref=Genbank:WP_012174802.1;Name=WP_012174802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959203.1;locus_tag=DOLE_RS07085;product=YqaA family protein;protein_id=WP_012174802.1;transl_table=11 NC_009943.1 RefSeq gene 1643548 1644321 . - . ID=gene-DOLE_RS07090;Name=DOLE_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07090;old_locus_tag=Dole_1382 NC_009943.1 Protein Homology CDS 1643548 1644321 . - 0 ID=cds-WP_012174803.1;Parent=gene-DOLE_RS07090;Dbxref=Genbank:WP_012174803.1;Name=WP_012174803.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024875.2;locus_tag=DOLE_RS07090;product=hypothetical protein;protein_id=WP_012174803.1;transl_table=11 NC_009943.1 RefSeq gene 1644338 1644838 . - . ID=gene-DOLE_RS18180;Name=DOLE_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18180;old_locus_tag=Dole_1383 NC_009943.1 GeneMarkS-2+ CDS 1644338 1644838 . - 0 ID=cds-WP_012174804.1;Parent=gene-DOLE_RS18180;Dbxref=Genbank:WP_012174804.1;Name=WP_012174804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18180;product=hypothetical protein;protein_id=WP_012174804.1;transl_table=11 NC_009943.1 RefSeq gene 1645089 1645442 . - . ID=gene-DOLE_RS07100;Name=DOLE_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07100 NC_009943.1 GeneMarkS-2+ CDS 1645089 1645442 . - 0 ID=cds-WP_041280423.1;Parent=gene-DOLE_RS07100;Dbxref=Genbank:WP_041280423.1;Name=WP_041280423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07100;product=hypothetical protein;protein_id=WP_041280423.1;transl_table=11 NC_009943.1 RefSeq gene 1645605 1646957 . + . ID=gene-DOLE_RS07105;Name=DOLE_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07105;old_locus_tag=Dole_1384 NC_009943.1 Protein Homology CDS 1645605 1646957 . + 0 ID=cds-WP_012174089.1-3;Parent=gene-DOLE_RS07105;Dbxref=Genbank:WP_012174089.1;Name=WP_012174089.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174089.1;locus_tag=DOLE_RS07105;product=ISNCY-like element ISDol1 family transposase;protein_id=WP_012174089.1;transl_table=11 NC_009943.1 RefSeq gene 1647210 1647521 . - . ID=gene-DOLE_RS07110;Name=DOLE_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07110;old_locus_tag=Dole_1385 NC_009943.1 Protein Homology CDS 1647210 1647521 . - 0 ID=cds-WP_012174805.1;Parent=gene-DOLE_RS07110;Dbxref=Genbank:WP_012174805.1;Name=WP_012174805.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163631.1;locus_tag=DOLE_RS07110;product=HigA family addiction module antitoxin;protein_id=WP_012174805.1;transl_table=11 NC_009943.1 RefSeq gene 1647534 1647812 . - . ID=gene-DOLE_RS17925;Name=DOLE_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17925;old_locus_tag=Dole_1386 NC_009943.1 Protein Homology CDS 1647534 1647812 . - 0 ID=cds-WP_012174806.1;Parent=gene-DOLE_RS17925;Dbxref=Genbank:WP_012174806.1;Name=WP_012174806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008868900.1;locus_tag=DOLE_RS17925;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012174806.1;transl_table=11 NC_009943.1 RefSeq gene 1648109 1648666 . - . ID=gene-DOLE_RS07115;Name=DOLE_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07115;old_locus_tag=Dole_1387 NC_009943.1 GeneMarkS-2+ CDS 1648109 1648666 . - 0 ID=cds-WP_012174807.1;Parent=gene-DOLE_RS07115;Dbxref=Genbank:WP_012174807.1;Name=WP_012174807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07115;product=hypothetical protein;protein_id=WP_012174807.1;transl_table=11 NC_009943.1 RefSeq gene 1648874 1650202 . - . ID=gene-DOLE_RS07120;Name=DOLE_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07120;old_locus_tag=Dole_1388 NC_009943.1 GeneMarkS-2+ CDS 1648874 1650202 . - 0 ID=cds-WP_153304382.1;Parent=gene-DOLE_RS07120;Dbxref=Genbank:WP_153304382.1;Name=WP_153304382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07120;product=hypothetical protein;protein_id=WP_153304382.1;transl_table=11 NC_009943.1 RefSeq gene 1650309 1650764 . - . ID=gene-DOLE_RS07125;Name=DOLE_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07125;old_locus_tag=Dole_1389 NC_009943.1 GeneMarkS-2+ CDS 1650309 1650764 . - 0 ID=cds-WP_153304383.1;Parent=gene-DOLE_RS07125;Dbxref=Genbank:WP_153304383.1;Name=WP_153304383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07125;product=B-box zinc finger protein;protein_id=WP_153304383.1;transl_table=11 NC_009943.1 RefSeq gene 1650987 1651160 . - . ID=gene-DOLE_RS18185;Name=DOLE_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18185 NC_009943.1 GeneMarkS-2+ CDS 1650987 1651160 . - 0 ID=cds-WP_153304384.1;Parent=gene-DOLE_RS18185;Dbxref=Genbank:WP_153304384.1;Name=WP_153304384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18185;product=hypothetical protein;protein_id=WP_153304384.1;transl_table=11 NC_009943.1 RefSeq gene 1651177 1651392 . - . ID=gene-DOLE_RS07130;Name=DOLE_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07130;old_locus_tag=Dole_1390 NC_009943.1 GeneMarkS-2+ CDS 1651177 1651392 . - 0 ID=cds-WP_012174810.1;Parent=gene-DOLE_RS07130;Dbxref=Genbank:WP_012174810.1;Name=WP_012174810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07130;product=hypothetical protein;protein_id=WP_012174810.1;transl_table=11 NC_009943.1 RefSeq gene 1652091 1652498 . - . ID=gene-DOLE_RS07140;Name=DOLE_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07140 NC_009943.1 GeneMarkS-2+ CDS 1652091 1652498 . - 0 ID=cds-WP_153304385.1;Parent=gene-DOLE_RS07140;Dbxref=Genbank:WP_153304385.1;Name=WP_153304385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07140;product=hypothetical protein;protein_id=WP_153304385.1;transl_table=11 NC_009943.1 RefSeq gene 1652912 1652988 . - . ID=gene-DOLE_RS07145;Name=DOLE_RS07145;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS07145;old_locus_tag=Dole_R0023 NC_009943.1 tRNAscan-SE tRNA 1652912 1652988 . - . ID=rna-DOLE_RS07145;Parent=gene-DOLE_RS07145;anticodon=(pos:complement(1652952..1652954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS07145;product=tRNA-Arg NC_009943.1 tRNAscan-SE exon 1652912 1652988 . - . ID=exon-DOLE_RS07145-1;Parent=rna-DOLE_RS07145;anticodon=(pos:complement(1652952..1652954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS07145;product=tRNA-Arg NC_009943.1 RefSeq gene 1653023 1653916 . - . ID=gene-DOLE_RS07150;Name=DOLE_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07150;old_locus_tag=Dole_1391 NC_009943.1 Protein Homology CDS 1653023 1653916 . - 0 ID=cds-WP_012174811.1;Parent=gene-DOLE_RS07150;Dbxref=Genbank:WP_012174811.1;Name=WP_012174811.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014794.2;locus_tag=DOLE_RS07150;product=thiamine pyrophosphate-dependent enzyme;protein_id=WP_012174811.1;transl_table=11 NC_009943.1 RefSeq gene 1654315 1655505 . - . ID=gene-DOLE_RS07155;Name=DOLE_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07155;old_locus_tag=Dole_1392 NC_009943.1 Protein Homology CDS 1654315 1655505 . - 0 ID=cds-WP_012174812.1;Parent=gene-DOLE_RS07155;Dbxref=Genbank:WP_012174812.1;Name=WP_012174812.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013974.2;locus_tag=DOLE_RS07155;product=pyruvate ferredoxin oxidoreductase;protein_id=WP_012174812.1;transl_table=11 NC_009943.1 RefSeq gene 1655786 1656085 . - . ID=gene-DOLE_RS07160;Name=DOLE_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07160;old_locus_tag=Dole_1393 NC_009943.1 Protein Homology CDS 1655786 1656085 . - 0 ID=cds-WP_012174813.1;Parent=gene-DOLE_RS07160;Dbxref=Genbank:WP_012174813.1;Name=WP_012174813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02179.1;locus_tag=DOLE_RS07160;product=4Fe-4S binding protein;protein_id=WP_012174813.1;transl_table=11 NC_009943.1 RefSeq gene 1656090 1656650 . - . ID=gene-DOLE_RS07165;Name=DOLE_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07165;old_locus_tag=Dole_1394 NC_009943.1 Protein Homology CDS 1656090 1656650 . - 0 ID=cds-WP_012174814.1;Parent=gene-DOLE_RS07165;Dbxref=Genbank:WP_012174814.1;Name=WP_012174814.1;Ontology_term=GO:0016903;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: protein motif:HMM:TIGR02175.1;locus_tag=DOLE_RS07165;product=2-oxoacid:acceptor oxidoreductase family protein;protein_id=WP_012174814.1;transl_table=11 NC_009943.1 RefSeq gene 1657003 1658520 . - . ID=gene-DOLE_RS07170;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=DOLE_RS07170;old_locus_tag=Dole_1395 NC_009943.1 Protein Homology CDS 1657003 1658520 . - 0 ID=cds-WP_012174815.1;Parent=gene-DOLE_RS07170;Dbxref=Genbank:WP_012174815.1;Name=WP_012174815.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947365.1;locus_tag=DOLE_RS07170;product=glycerol kinase GlpK;protein_id=WP_012174815.1;transl_table=11 NC_009943.1 RefSeq gene 1658517 1659353 . - . ID=gene-DOLE_RS07175;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=DOLE_RS07175;old_locus_tag=Dole_1396 NC_009943.1 Protein Homology CDS 1658517 1659353 . - 0 ID=cds-WP_012174816.1;Parent=gene-DOLE_RS07175;Dbxref=Genbank:WP_012174816.1;Name=WP_012174816.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004075207.1;locus_tag=DOLE_RS07175;product=dihydrodipicolinate reductase;protein_id=WP_012174816.1;transl_table=11 NC_009943.1 RefSeq gene 1659808 1660833 . + . ID=gene-DOLE_RS07180;Name=DOLE_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07180;old_locus_tag=Dole_1397 NC_009943.1 Protein Homology CDS 1659808 1660833 . + 0 ID=cds-WP_012174817.1;Parent=gene-DOLE_RS07180;Dbxref=Genbank:WP_012174817.1;Name=WP_012174817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876355.1;locus_tag=DOLE_RS07180;product=hypothetical protein;protein_id=WP_012174817.1;transl_table=11 NC_009943.1 RefSeq gene 1660992 1661282 . + . ID=gene-DOLE_RS07185;Name=DOLE_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07185;old_locus_tag=Dole_1398 NC_009943.1 Protein Homology CDS 1660992 1661282 . + 0 ID=cds-WP_012174818.1;Parent=gene-DOLE_RS07185;Dbxref=Genbank:WP_012174818.1;Name=WP_012174818.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015925.2;locus_tag=DOLE_RS07185;product=putative quinol monooxygenase;protein_id=WP_012174818.1;transl_table=11 NC_009943.1 RefSeq gene 1661303 1662367 . + . ID=gene-DOLE_RS07190;Name=DOLE_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07190;old_locus_tag=Dole_1399 NC_009943.1 Protein Homology CDS 1661303 1662367 . + 0 ID=cds-WP_012174819.1;Parent=gene-DOLE_RS07190;Dbxref=Genbank:WP_012174819.1;Name=WP_012174819.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024118.2;locus_tag=DOLE_RS07190;product=MBL fold metallo-hydrolase;protein_id=WP_012174819.1;transl_table=11 NC_009943.1 RefSeq gene 1662364 1665240 . + . ID=gene-DOLE_RS07195;Name=DOLE_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07195;old_locus_tag=Dole_1400 NC_009943.1 Protein Homology CDS 1662364 1665240 . + 0 ID=cds-WP_012174820.1;Parent=gene-DOLE_RS07195;Dbxref=Genbank:WP_012174820.1;Name=WP_012174820.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017044.2;locus_tag=DOLE_RS07195;product=insulinase family protein;protein_id=WP_012174820.1;transl_table=11 NC_009943.1 RefSeq gene 1665411 1666589 . + . ID=gene-DOLE_RS07200;Name=DOLE_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07200;old_locus_tag=Dole_1401 NC_009943.1 Protein Homology CDS 1665411 1666589 . + 0 ID=cds-WP_012174821.1;Parent=gene-DOLE_RS07200;Dbxref=Genbank:WP_012174821.1;Name=WP_012174821.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013237.2;locus_tag=DOLE_RS07200;product=PLP-dependent aspartate aminotransferase family protein;protein_id=WP_012174821.1;transl_table=11 NC_009943.1 RefSeq gene 1666636 1668213 . + . ID=gene-DOLE_RS07205;Name=DOLE_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07205;old_locus_tag=Dole_1402 NC_009943.1 Protein Homology CDS 1666636 1668213 . + 0 ID=cds-WP_012174822.1;Parent=gene-DOLE_RS07205;Dbxref=Genbank:WP_012174822.1;Name=WP_012174822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906018.1;locus_tag=DOLE_RS07205;product=MBL fold metallo-hydrolase;protein_id=WP_012174822.1;transl_table=11 NC_009943.1 RefSeq gene 1668353 1670149 . + . ID=gene-DOLE_RS07210;Name=DOLE_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07210;old_locus_tag=Dole_1403 NC_009943.1 GeneMarkS-2+ CDS 1668353 1670149 . + 0 ID=cds-WP_012174823.1;Parent=gene-DOLE_RS07210;Dbxref=Genbank:WP_012174823.1;Name=WP_012174823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07210;product=hypothetical protein;protein_id=WP_012174823.1;transl_table=11 NC_009943.1 RefSeq gene 1670162 1670707 . + . ID=gene-DOLE_RS07215;Name=DOLE_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07215;old_locus_tag=Dole_1404 NC_009943.1 GeneMarkS-2+ CDS 1670162 1670707 . + 0 ID=cds-WP_012174824.1;Parent=gene-DOLE_RS07215;Dbxref=Genbank:WP_012174824.1;Name=WP_012174824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07215;product=hypothetical protein;protein_id=WP_012174824.1;transl_table=11 NC_009943.1 RefSeq gene 1670709 1671233 . + . ID=gene-DOLE_RS07220;Name=DOLE_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07220;old_locus_tag=Dole_1405 NC_009943.1 Protein Homology CDS 1670709 1671233 . + 0 ID=cds-WP_012174825.1;Parent=gene-DOLE_RS07220;Dbxref=Genbank:WP_012174825.1;Name=WP_012174825.1;Ontology_term=GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;inference=COORDINATES: protein motif:HMM:NF027851.2;locus_tag=DOLE_RS07220;product=general secretion pathway protein GspB;protein_id=WP_012174825.1;transl_table=11 NC_009943.1 RefSeq gene 1671233 1672879 . + . ID=gene-DOLE_RS07225;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=protein_coding;locus_tag=DOLE_RS07225;old_locus_tag=Dole_1406 NC_009943.1 Protein Homology CDS 1671233 1672879 . + 0 ID=cds-WP_052294271.1;Parent=gene-DOLE_RS07225;Dbxref=Genbank:WP_052294271.1;Name=WP_052294271.1;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: protein motif:HMM:TIGR02515.1;locus_tag=DOLE_RS07225;product=type IV pilus secretin PilQ;protein_id=WP_052294271.1;transl_table=11 NC_009943.1 RefSeq gene 1672883 1674175 . + . ID=gene-DOLE_RS17225;Name=DOLE_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17225;old_locus_tag=Dole_1407 NC_009943.1 Protein Homology CDS 1672883 1674175 . + 0 ID=cds-WP_012174827.1;Parent=gene-DOLE_RS17225;Dbxref=Genbank:WP_012174827.1;Name=WP_012174827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024571.2;locus_tag=DOLE_RS17225;product=AAA family ATPase;protein_id=WP_012174827.1;transl_table=11 NC_009943.1 RefSeq gene 1674201 1675934 . + . ID=gene-DOLE_RS07235;Name=DOLE_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07235;old_locus_tag=Dole_1408 NC_009943.1 Protein Homology CDS 1674201 1675934 . + 0 ID=cds-WP_012174828.1;Parent=gene-DOLE_RS07235;Dbxref=Genbank:WP_012174828.1;Name=WP_012174828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949533.1;locus_tag=DOLE_RS07235;product=GspE/PulE family protein;protein_id=WP_012174828.1;transl_table=11 NC_009943.1 RefSeq gene 1675941 1677158 . + . ID=gene-DOLE_RS07240;Name=DOLE_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07240;old_locus_tag=Dole_1409 NC_009943.1 Protein Homology CDS 1675941 1677158 . + 0 ID=cds-WP_012174829.1;Parent=gene-DOLE_RS07240;Dbxref=Genbank:WP_012174829.1;Name=WP_012174829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956226.1;locus_tag=DOLE_RS07240;product=type II secretion system F family protein;protein_id=WP_012174829.1;transl_table=11 NC_009943.1 RefSeq gene 1677292 1677705 . + . ID=gene-DOLE_RS18670;Name=DOLE_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18670;old_locus_tag=Dole_1410 NC_009943.1 Protein Homology CDS 1677292 1677705 . + 0 ID=cds-WP_012174830.1;Parent=gene-DOLE_RS18670;Dbxref=Genbank:WP_012174830.1;Name=WP_012174830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016448729.1;locus_tag=DOLE_RS18670;product=type II secretion system protein;protein_id=WP_012174830.1;transl_table=11 NC_009943.1 RefSeq gene 1677887 1680013 . + . ID=gene-DOLE_RS07250;Name=DOLE_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07250;old_locus_tag=Dole_1411 NC_009943.1 Protein Homology CDS 1677887 1680013 . + 0 ID=cds-WP_012174831.1;Parent=gene-DOLE_RS07250;Dbxref=Genbank:WP_012174831.1;Name=WP_012174831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024574.2;locus_tag=DOLE_RS07250;product=tetratricopeptide repeat protein;protein_id=WP_012174831.1;transl_table=11 NC_009943.1 RefSeq gene 1680001 1680828 . + . ID=gene-DOLE_RS07255;Name=DOLE_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07255;old_locus_tag=Dole_1412 NC_009943.1 Protein Homology CDS 1680001 1680828 . + 0 ID=cds-WP_012174832.1;Parent=gene-DOLE_RS07255;Dbxref=Genbank:WP_012174832.1;Name=WP_012174832.1;Ontology_term=GO:0042158,GO:0008961,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949546.1;locus_tag=DOLE_RS07255;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_012174832.1;transl_table=11 NC_009943.1 RefSeq gene 1680986 1681624 . + . ID=gene-DOLE_RS07260;Name=DOLE_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07260;old_locus_tag=Dole_1413 NC_009943.1 Protein Homology CDS 1680986 1681624 . + 0 ID=cds-WP_012174833.1;Parent=gene-DOLE_RS07260;Dbxref=Genbank:WP_012174833.1;Name=WP_012174833.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025736.2;locus_tag=DOLE_RS07260;product=phosphatase PAP2 family protein;protein_id=WP_012174833.1;transl_table=11 NC_009943.1 RefSeq gene 1681614 1685492 . - . ID=gene-DOLE_RS07265;Name=DOLE_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07265;old_locus_tag=Dole_1414 NC_009943.1 Protein Homology CDS 1681614 1685492 . - 0 ID=cds-WP_012174834.1;Parent=gene-DOLE_RS07265;Dbxref=Genbank:WP_012174834.1;Name=WP_012174834.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=DOLE_RS07265;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_012174834.1;transl_table=11 NC_009943.1 RefSeq gene 1685495 1685929 . - . ID=gene-DOLE_RS07270;Name=DOLE_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07270;old_locus_tag=Dole_1415 NC_009943.1 Protein Homology CDS 1685495 1685929 . - 0 ID=cds-WP_012174835.1;Parent=gene-DOLE_RS07270;Dbxref=Genbank:WP_012174835.1;Name=WP_012174835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=DOLE_RS07270;product=type II secretion system protein;protein_id=WP_012174835.1;transl_table=11 NC_009943.1 RefSeq gene 1685926 1686390 . - . ID=gene-DOLE_RS17235;Name=DOLE_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17235;old_locus_tag=Dole_1416 NC_009943.1 GeneMarkS-2+ CDS 1685926 1686390 . - 0 ID=cds-WP_052294272.1;Parent=gene-DOLE_RS17235;Dbxref=Genbank:WP_052294272.1;Name=WP_052294272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17235;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_052294272.1;transl_table=11 NC_009943.1 RefSeq gene 1686680 1688746 . + . ID=gene-DOLE_RS07280;Name=DOLE_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07280;old_locus_tag=Dole_1417 NC_009943.1 Protein Homology CDS 1686680 1688746 . + 0 ID=cds-WP_012174837.1;Parent=gene-DOLE_RS07280;Dbxref=Genbank:WP_012174837.1;Name=WP_012174837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073939.1;locus_tag=DOLE_RS07280;product=(Fe-S)-binding protein;protein_id=WP_012174837.1;transl_table=11 NC_009943.1 RefSeq gene 1688820 1689593 . + . ID=gene-DOLE_RS07285;Name=DOLE_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07285;old_locus_tag=Dole_1418 NC_009943.1 Protein Homology CDS 1688820 1689593 . + 0 ID=cds-WP_012174838.1;Parent=gene-DOLE_RS07285;Dbxref=Genbank:WP_012174838.1;Name=WP_012174838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947966.1;locus_tag=DOLE_RS07285;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_012174838.1;transl_table=11 NC_009943.1 RefSeq gene 1689593 1690555 . + . ID=gene-DOLE_RS07290;Name=DOLE_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07290;old_locus_tag=Dole_1419 NC_009943.1 Protein Homology CDS 1689593 1690555 . + 0 ID=cds-WP_012174839.1;Parent=gene-DOLE_RS07290;Dbxref=Genbank:WP_012174839.1;Name=WP_012174839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905380.1;locus_tag=DOLE_RS07290;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_012174839.1;transl_table=11 NC_009943.1 RefSeq gene 1690646 1692277 . - . ID=gene-DOLE_RS17240;Name=DOLE_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17240;old_locus_tag=Dole_1420 NC_009943.1 Protein Homology CDS 1690646 1692277 . - 0 ID=cds-WP_012174840.1;Parent=gene-DOLE_RS17240;Dbxref=Genbank:WP_012174840.1;Name=WP_012174840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS17240;product=PAS domain S-box protein;protein_id=WP_012174840.1;transl_table=11 NC_009943.1 RefSeq gene 1692281 1693888 . - . ID=gene-DOLE_RS17245;Name=DOLE_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17245;old_locus_tag=Dole_1421 NC_009943.1 Protein Homology CDS 1692281 1693888 . - 0 ID=cds-WP_012174841.1;Parent=gene-DOLE_RS17245;Dbxref=Genbank:WP_012174841.1;Name=WP_012174841.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS17245;product=HD domain-containing protein;protein_id=WP_012174841.1;transl_table=11 NC_009943.1 RefSeq gene 1694221 1695150 . + . ID=gene-DOLE_RS07305;Name=DOLE_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07305;old_locus_tag=Dole_1422 NC_009943.1 Protein Homology CDS 1694221 1695150 . + 0 ID=cds-WP_012174842.1;Parent=gene-DOLE_RS07305;Dbxref=Genbank:WP_012174842.1;Name=WP_012174842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877335.1;locus_tag=DOLE_RS07305;product=J domain-containing protein;protein_id=WP_012174842.1;transl_table=11 NC_009943.1 RefSeq gene 1695253 1695786 . + . ID=gene-DOLE_RS07310;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=DOLE_RS07310;old_locus_tag=Dole_1423 NC_009943.1 Protein Homology CDS 1695253 1695786 . + 0 ID=cds-WP_012174843.1;Parent=gene-DOLE_RS07310;Dbxref=Genbank:WP_012174843.1;Name=WP_012174843.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877336.1;locus_tag=DOLE_RS07310;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_012174843.1;transl_table=11 NC_009943.1 RefSeq gene 1695812 1697719 . + . ID=gene-DOLE_RS17250;Name=DOLE_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17250;old_locus_tag=Dole_1424 NC_009943.1 Protein Homology CDS 1695812 1697719 . + 0 ID=cds-WP_012174844.1;Parent=gene-DOLE_RS17250;Dbxref=Genbank:WP_012174844.1;Name=WP_012174844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023334.2;locus_tag=DOLE_RS17250;product=zinc-ribbon domain-containing protein;protein_id=WP_012174844.1;transl_table=11 NC_009943.1 RefSeq gene 1697829 1697905 . + . ID=gene-DOLE_RS07325;Name=DOLE_RS07325;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS07325;old_locus_tag=Dole_R0024 NC_009943.1 tRNAscan-SE tRNA 1697829 1697905 . + . ID=rna-DOLE_RS07325;Parent=gene-DOLE_RS07325;anticodon=(pos:1697863..1697865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS07325;product=tRNA-Met NC_009943.1 tRNAscan-SE exon 1697829 1697905 . + . ID=exon-DOLE_RS07325-1;Parent=rna-DOLE_RS07325;anticodon=(pos:1697863..1697865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS07325;product=tRNA-Met NC_009943.1 RefSeq gene 1697974 1698357 . + . ID=gene-DOLE_RS07330;Name=DOLE_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07330;old_locus_tag=Dole_1425 NC_009943.1 Protein Homology CDS 1697974 1698357 . + 0 ID=cds-WP_012174845.1;Parent=gene-DOLE_RS07330;Dbxref=Genbank:WP_012174845.1;Name=WP_012174845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878843.1;locus_tag=DOLE_RS07330;product=DUF1992 domain-containing protein;protein_id=WP_012174845.1;transl_table=11 NC_009943.1 RefSeq gene 1698381 1699322 . + . ID=gene-DOLE_RS07335;Name=DOLE_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07335;old_locus_tag=Dole_1426 NC_009943.1 Protein Homology CDS 1698381 1699322 . + 0 ID=cds-WP_012174846.1;Parent=gene-DOLE_RS07335;Dbxref=Genbank:WP_012174846.1;Name=WP_012174846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956503.1;locus_tag=DOLE_RS07335;product=D-alanine--D-alanine ligase;protein_id=WP_012174846.1;transl_table=11 NC_009943.1 RefSeq gene 1699399 1701174 . + . ID=gene-DOLE_RS07340;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=DOLE_RS07340;old_locus_tag=Dole_1427 NC_009943.1 Protein Homology CDS 1699399 1701174 . + 0 ID=cds-WP_012174847.1;Parent=gene-DOLE_RS07340;Dbxref=Genbank:WP_012174847.1;Name=WP_012174847.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946829.1;locus_tag=DOLE_RS07340;product=phosphoribosylamine--glycine ligase;protein_id=WP_012174847.1;transl_table=11 NC_009943.1 RefSeq gene 1701131 1701808 . + . ID=gene-DOLE_RS07345;Name=DOLE_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07345;old_locus_tag=Dole_1428 NC_009943.1 Protein Homology CDS 1701131 1701808 . + 0 ID=cds-WP_012174848.1;Parent=gene-DOLE_RS07345;Dbxref=Genbank:WP_012174848.1;Name=WP_012174848.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663284.1;locus_tag=DOLE_RS07345;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_012174848.1;transl_table=11 NC_009943.1 RefSeq gene 1701865 1701951 . + . ID=gene-DOLE_RS07350;Name=DOLE_RS07350;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS07350;old_locus_tag=Dole_R0025 NC_009943.1 tRNAscan-SE tRNA 1701865 1701951 . + . ID=rna-DOLE_RS07350;Parent=gene-DOLE_RS07350;anticodon=(pos:1701899..1701901);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS07350;product=tRNA-Leu NC_009943.1 tRNAscan-SE exon 1701865 1701951 . + . ID=exon-DOLE_RS07350-1;Parent=rna-DOLE_RS07350;anticodon=(pos:1701899..1701901);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS07350;product=tRNA-Leu NC_009943.1 RefSeq gene 1702008 1702916 . + . ID=gene-DOLE_RS07355;Name=DOLE_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07355;old_locus_tag=Dole_1429 NC_009943.1 Protein Homology CDS 1702008 1702916 . + 0 ID=cds-WP_167320857.1;Parent=gene-DOLE_RS07355;Dbxref=Genbank:WP_167320857.1;Name=WP_167320857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS07355;product=MBL fold metallo-hydrolase;protein_id=WP_167320857.1;transl_table=11 NC_009943.1 RefSeq gene 1703062 1704294 . + . ID=gene-DOLE_RS07360;Name=DOLE_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07360;old_locus_tag=Dole_1430 NC_009943.1 Protein Homology CDS 1703062 1704294 . + 0 ID=cds-WP_012174850.1;Parent=gene-DOLE_RS07360;Dbxref=Genbank:WP_012174850.1;Name=WP_012174850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875834.1;locus_tag=DOLE_RS07360;product=MFS transporter;protein_id=WP_012174850.1;transl_table=11 NC_009943.1 RefSeq gene 1704393 1705568 . + . ID=gene-DOLE_RS07365;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=DOLE_RS07365;old_locus_tag=Dole_1431 NC_009943.1 Protein Homology CDS 1704393 1705568 . + 0 ID=cds-WP_012174851.1;Parent=gene-DOLE_RS07365;Dbxref=Genbank:WP_012174851.1;Name=WP_012174851.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: protein motif:HMM:TIGR04407.1;locus_tag=DOLE_RS07365;product=LPS export ABC transporter permease LptF;protein_id=WP_012174851.1;transl_table=11 NC_009943.1 RefSeq gene 1705565 1706644 . + . ID=gene-DOLE_RS07370;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=DOLE_RS07370;old_locus_tag=Dole_1432 NC_009943.1 Protein Homology CDS 1705565 1706644 . + 0 ID=cds-WP_012174852.1;Parent=gene-DOLE_RS07370;Dbxref=Genbank:WP_012174852.1;Name=WP_012174852.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: protein motif:HMM:TIGR04408.1;locus_tag=DOLE_RS07370;product=LPS export ABC transporter permease LptG;protein_id=WP_012174852.1;transl_table=11 NC_009943.1 RefSeq gene 1706664 1709042 . + . ID=gene-DOLE_RS17255;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=DOLE_RS17255;old_locus_tag=Dole_1433 NC_009943.1 Protein Homology CDS 1706664 1709042 . + 0 ID=cds-WP_012174853.1;Parent=gene-DOLE_RS17255;Dbxref=Genbank:WP_012174853.1;Name=WP_012174853.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: protein motif:HMM:NF014645.2;locus_tag=DOLE_RS17255;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_012174853.1;transl_table=11 NC_009943.1 RefSeq gene 1709194 1710000 . + . ID=gene-DOLE_RS07380;Name=DOLE_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07380;old_locus_tag=Dole_1434 NC_009943.1 GeneMarkS-2+ CDS 1709194 1710000 . + 0 ID=cds-WP_012174854.1;Parent=gene-DOLE_RS07380;Dbxref=Genbank:WP_012174854.1;Name=WP_012174854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07380;product=hypothetical protein;protein_id=WP_012174854.1;transl_table=11 NC_009943.1 RefSeq gene 1710104 1710907 . + . ID=gene-DOLE_RS07385;Name=DOLE_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07385;old_locus_tag=Dole_1435 NC_009943.1 Protein Homology CDS 1710104 1710907 . + 0 ID=cds-WP_012174855.1;Parent=gene-DOLE_RS07385;Dbxref=Genbank:WP_012174855.1;Name=WP_012174855.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF016908.2;locus_tag=DOLE_RS07385;product=FkbM family methyltransferase;protein_id=WP_012174855.1;transl_table=11 NC_009943.1 RefSeq gene 1710963 1711877 . - . ID=gene-DOLE_RS07390;Name=DOLE_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07390;old_locus_tag=Dole_1436 NC_009943.1 Protein Homology CDS 1710963 1711877 . - 0 ID=cds-WP_167320858.1;Parent=gene-DOLE_RS07390;Dbxref=Genbank:WP_167320858.1;Name=WP_167320858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016800.2;locus_tag=DOLE_RS07390;product=O-antigen ligase family protein;protein_id=WP_167320858.1;transl_table=11 NC_009943.1 RefSeq gene 1712188 1713228 . - . ID=gene-DOLE_RS07395;Name=DOLE_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07395;old_locus_tag=Dole_1437 NC_009943.1 Protein Homology CDS 1712188 1713228 . - 0 ID=cds-WP_167320859.1;Parent=gene-DOLE_RS07395;Dbxref=Genbank:WP_167320859.1;Name=WP_167320859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=DOLE_RS07395;product=glycosyltransferase;protein_id=WP_167320859.1;transl_table=11 NC_009943.1 RefSeq gene 1713255 1714277 . - . ID=gene-DOLE_RS07400;Name=DOLE_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07400;old_locus_tag=Dole_1438 NC_009943.1 Protein Homology CDS 1713255 1714277 . - 0 ID=cds-WP_012174858.1;Parent=gene-DOLE_RS07400;Dbxref=Genbank:WP_012174858.1;Name=WP_012174858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024914.2;locus_tag=DOLE_RS07400;product=glycosyltransferase;protein_id=WP_012174858.1;transl_table=11 NC_009943.1 RefSeq gene 1714317 1715204 . - . ID=gene-DOLE_RS07405;Name=DOLE_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07405;old_locus_tag=Dole_1439 NC_009943.1 GeneMarkS-2+ CDS 1714317 1715204 . - 0 ID=cds-WP_153304387.1;Parent=gene-DOLE_RS07405;Dbxref=Genbank:WP_153304387.1;Name=WP_153304387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07405;product=hypothetical protein;protein_id=WP_153304387.1;transl_table=11 NC_009943.1 RefSeq gene 1715201 1716673 . - . ID=gene-DOLE_RS07410;Name=DOLE_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07410;old_locus_tag=Dole_1440 NC_009943.1 Protein Homology CDS 1715201 1716673 . - 0 ID=cds-WP_153304388.1;Parent=gene-DOLE_RS07410;Dbxref=Genbank:WP_153304388.1;Name=WP_153304388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.2;locus_tag=DOLE_RS07410;product=glycosyltransferase family 39 protein;protein_id=WP_153304388.1;transl_table=11 NC_009943.1 RefSeq gene 1716696 1717061 . - . ID=gene-DOLE_RS07415;Name=DOLE_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07415;old_locus_tag=Dole_1441 NC_009943.1 Protein Homology CDS 1716696 1717061 . - 0 ID=cds-WP_041280430.1;Parent=gene-DOLE_RS07415;Dbxref=Genbank:WP_041280430.1;Name=WP_041280430.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016060.2;locus_tag=DOLE_RS07415;product=GtrA family protein;protein_id=WP_041280430.1;transl_table=11 NC_009943.1 RefSeq gene 1717048 1717986 . - . ID=gene-DOLE_RS07420;Name=DOLE_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07420;old_locus_tag=Dole_1442 NC_009943.1 Protein Homology CDS 1717048 1717986 . - 0 ID=cds-WP_012174862.1;Parent=gene-DOLE_RS07420;Dbxref=Genbank:WP_012174862.1;Name=WP_012174862.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS07420;product=glycosyltransferase family 2 protein;protein_id=WP_012174862.1;transl_table=11 NC_009943.1 RefSeq gene 1717986 1719137 . - . ID=gene-DOLE_RS07425;Name=DOLE_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07425;old_locus_tag=Dole_1443 NC_009943.1 Protein Homology CDS 1717986 1719137 . - 0 ID=cds-WP_012174863.1;Parent=gene-DOLE_RS07425;Dbxref=Genbank:WP_012174863.1;Name=WP_012174863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=DOLE_RS07425;product=glycosyltransferase family 4 protein;protein_id=WP_012174863.1;transl_table=11 NC_009943.1 RefSeq gene 1719113 1720033 . - . ID=gene-DOLE_RS07430;Name=DOLE_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07430;old_locus_tag=Dole_1444 NC_009943.1 Protein Homology CDS 1719113 1720033 . - 0 ID=cds-WP_012174864.1;Parent=gene-DOLE_RS07430;Dbxref=Genbank:WP_012174864.1;Name=WP_012174864.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018017.2;locus_tag=DOLE_RS07430;product=mitochondrial fission ELM1 family protein;protein_id=WP_012174864.1;transl_table=11 NC_009943.1 RefSeq gene 1720089 1721000 . - . ID=gene-DOLE_RS07435;Name=DOLE_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07435;old_locus_tag=Dole_1445 NC_009943.1 Protein Homology CDS 1720089 1721000 . - 0 ID=cds-WP_012174865.1;Parent=gene-DOLE_RS07435;Dbxref=Genbank:WP_012174865.1;Name=WP_012174865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015251.2;locus_tag=DOLE_RS07435;product=lysophospholipid acyltransferase family protein;protein_id=WP_012174865.1;transl_table=11 NC_009943.1 RefSeq gene 1721408 1724608 . + . ID=gene-DOLE_RS07440;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=DOLE_RS07440;old_locus_tag=Dole_1446 NC_009943.1 Protein Homology CDS 1721408 1724608 . + 0 ID=cds-WP_012174866.1;Parent=gene-DOLE_RS07440;Dbxref=Genbank:WP_012174866.1;Name=WP_012174866.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609167.1;locus_tag=DOLE_RS07440;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_012174866.1;transl_table=11 NC_009943.1 RefSeq gene 1724601 1724861 . - . ID=gene-DOLE_RS07445;Name=DOLE_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07445 NC_009943.1 GeneMarkS-2+ CDS 1724601 1724861 . - 0 ID=cds-WP_041280431.1;Parent=gene-DOLE_RS07445;Dbxref=Genbank:WP_041280431.1;Name=WP_041280431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07445;product=hypothetical protein;protein_id=WP_041280431.1;transl_table=11 NC_009943.1 RefSeq gene 1724913 1725470 . + . ID=gene-DOLE_RS07450;Name=DOLE_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07450;old_locus_tag=Dole_1447 NC_009943.1 GeneMarkS-2+ CDS 1724913 1725470 . + 0 ID=cds-WP_012174867.1;Parent=gene-DOLE_RS07450;Dbxref=Genbank:WP_012174867.1;Name=WP_012174867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07450;product=hypothetical protein;protein_id=WP_012174867.1;transl_table=11 NC_009943.1 RefSeq gene 1725537 1726103 . + . ID=gene-DOLE_RS07455;Name=DOLE_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07455;old_locus_tag=Dole_1448 NC_009943.1 Protein Homology CDS 1725537 1726103 . + 0 ID=cds-WP_012174868.1;Parent=gene-DOLE_RS07455;Dbxref=Genbank:WP_012174868.1;Name=WP_012174868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175043.1;locus_tag=DOLE_RS07455;product=hypothetical protein;protein_id=WP_012174868.1;transl_table=11 NC_009943.1 RefSeq gene 1726396 1727958 . + . ID=gene-DOLE_RS07460;Name=DOLE_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07460;old_locus_tag=Dole_1449 NC_009943.1 Protein Homology CDS 1726396 1727958 . + 0 ID=cds-WP_012174869.1;Parent=gene-DOLE_RS07460;Dbxref=Genbank:WP_012174869.1;Name=WP_012174869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022518.2;locus_tag=DOLE_RS07460;product=DUF2868 domain-containing protein;protein_id=WP_012174869.1;transl_table=11 NC_009943.1 RefSeq gene 1727951 1729375 . + . ID=gene-DOLE_RS07465;Name=DOLE_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07465;old_locus_tag=Dole_1450 NC_009943.1 Protein Homology CDS 1727951 1729375 . + 0 ID=cds-WP_012174870.1;Parent=gene-DOLE_RS07465;Dbxref=Genbank:WP_012174870.1;Name=WP_012174870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402546.1;locus_tag=DOLE_RS07465;product=GTPase/DUF3482 domain-containing protein;protein_id=WP_012174870.1;transl_table=11 NC_009943.1 RefSeq gene 1730112 1731860 . + . ID=gene-DOLE_RS07470;Name=DOLE_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07470;old_locus_tag=Dole_1451 NC_009943.1 Protein Homology CDS 1730112 1731860 . + 0 ID=cds-WP_167320860.1;Parent=gene-DOLE_RS07470;Dbxref=Genbank:WP_167320860.1;Name=WP_167320860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024816.2;locus_tag=DOLE_RS07470;product=tetratricopeptide repeat protein;protein_id=WP_167320860.1;transl_table=11 NC_009943.1 RefSeq gene 1731916 1733304 . - . ID=gene-DOLE_RS07475;Name=DOLE_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07475;old_locus_tag=Dole_1452 NC_009943.1 Protein Homology CDS 1731916 1733304 . - 0 ID=cds-WP_041280432.1;Parent=gene-DOLE_RS07475;Dbxref=Genbank:WP_041280432.1;Name=WP_041280432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585981.1;locus_tag=DOLE_RS07475;product=MFS transporter;protein_id=WP_041280432.1;transl_table=11 NC_009943.1 RefSeq gene 1733383 1736916 . - . ID=gene-DOLE_RS07480;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=DOLE_RS07480;old_locus_tag=Dole_1453 NC_009943.1 Protein Homology CDS 1733383 1736916 . - 0 ID=cds-WP_012174873.1;Parent=gene-DOLE_RS07480;Dbxref=Genbank:WP_012174873.1;Name=WP_012174873.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948875.1;locus_tag=DOLE_RS07480;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_012174873.1;transl_table=11 NC_009943.1 RefSeq gene 1737176 1737661 . + . ID=gene-DOLE_RS07485;Name=DOLE_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07485;old_locus_tag=Dole_1454 NC_009943.1 Protein Homology CDS 1737176 1737661 . + 0 ID=cds-WP_167320861.1;Parent=gene-DOLE_RS07485;Dbxref=Genbank:WP_167320861.1;Name=WP_167320861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024854.2;locus_tag=DOLE_RS07485;product=MarR family transcriptional regulator;protein_id=WP_167320861.1;transl_table=11 NC_009943.1 RefSeq gene 1737717 1739624 . + . ID=gene-DOLE_RS07490;Name=DOLE_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07490;old_locus_tag=Dole_1455 NC_009943.1 Protein Homology CDS 1737717 1739624 . + 0 ID=cds-WP_012174875.1;Parent=gene-DOLE_RS07490;Dbxref=Genbank:WP_012174875.1;Name=WP_012174875.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=DOLE_RS07490;product=FAD-dependent oxidoreductase;protein_id=WP_012174875.1;transl_table=11 NC_009943.1 RefSeq gene 1739661 1740434 . + . ID=gene-DOLE_RS07495;Name=DOLE_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07495;old_locus_tag=Dole_1456 NC_009943.1 Protein Homology CDS 1739661 1740434 . + 0 ID=cds-WP_012174876.1;Parent=gene-DOLE_RS07495;Dbxref=Genbank:WP_012174876.1;Name=WP_012174876.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF006108.0;locus_tag=DOLE_RS07495;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_012174876.1;transl_table=11 NC_009943.1 RefSeq gene 1740449 1740646 . + . ID=gene-DOLE_RS07500;Name=DOLE_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07500;old_locus_tag=Dole_1457 NC_009943.1 Protein Homology CDS 1740449 1740646 . + 0 ID=cds-WP_012174877.1;Parent=gene-DOLE_RS07500;Dbxref=Genbank:WP_012174877.1;Name=WP_012174877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022577.2;locus_tag=DOLE_RS07500;product=DUF2892 domain-containing protein;protein_id=WP_012174877.1;transl_table=11 NC_009943.1 RefSeq gene 1740711 1741223 . - . ID=gene-DOLE_RS07505;Name=DOLE_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07505;old_locus_tag=Dole_1458 NC_009943.1 Protein Homology CDS 1740711 1741223 . - 0 ID=cds-WP_012174878.1;Parent=gene-DOLE_RS07505;Dbxref=Genbank:WP_012174878.1;Name=WP_012174878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903678.1;locus_tag=DOLE_RS07505;product=acyl-CoA thioesterase;protein_id=WP_012174878.1;transl_table=11 NC_009943.1 RefSeq gene 1741258 1742322 . - . ID=gene-DOLE_RS07510;Name=DOLE_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07510;old_locus_tag=Dole_1459 NC_009943.1 Protein Homology CDS 1741258 1742322 . - 0 ID=cds-WP_012174879.1;Parent=gene-DOLE_RS07510;Dbxref=Genbank:WP_012174879.1;Name=WP_012174879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662674.1;locus_tag=DOLE_RS07510;product=phosphotransferase family protein;protein_id=WP_012174879.1;transl_table=11 NC_009943.1 RefSeq gene 1742629 1743129 . + . ID=gene-DOLE_RS07515;Name=DOLE_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07515;old_locus_tag=Dole_1460 NC_009943.1 Protein Homology CDS 1742629 1743129 . + 0 ID=cds-WP_012174880.1;Parent=gene-DOLE_RS07515;Dbxref=Genbank:WP_012174880.1;Name=WP_012174880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906012.1;locus_tag=DOLE_RS07515;product=peptidylprolyl isomerase;protein_id=WP_012174880.1;transl_table=11 NC_009943.1 RefSeq gene 1743547 1745517 . + . ID=gene-DOLE_RS07520;Name=cooS;gbkey=Gene;gene=cooS;gene_biotype=protein_coding;locus_tag=DOLE_RS07520;old_locus_tag=Dole_1461 NC_009943.1 Protein Homology CDS 1743547 1745517 . + 0 ID=cds-WP_012174881.1;Parent=gene-DOLE_RS07520;Dbxref=Genbank:WP_012174881.1;Name=WP_012174881.1;Ontology_term=GO:0018492;gbkey=CDS;gene=cooS;go_function=carbon-monoxide dehydrogenase (acceptor) activity|0018492||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014955627.1;locus_tag=DOLE_RS07520;product=anaerobic carbon-monoxide dehydrogenase catalytic subunit;protein_id=WP_012174881.1;transl_table=11 NC_009943.1 RefSeq gene 1745703 1747595 . + . ID=gene-DOLE_RS07525;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=DOLE_RS07525;old_locus_tag=Dole_1462 NC_009943.1 Protein Homology CDS 1745703 1747595 . + 0 ID=cds-WP_012174882.1;Parent=gene-DOLE_RS07525;Dbxref=Genbank:WP_012174882.1;Name=WP_012174882.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: protein motif:HMM:TIGR01536.1;locus_tag=DOLE_RS07525;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_012174882.1;transl_table=11 NC_009943.1 RefSeq gene 1747845 1748780 . + . ID=gene-DOLE_RS07530;Name=DOLE_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07530;old_locus_tag=Dole_1463 NC_009943.1 GeneMarkS-2+ CDS 1747845 1748780 . + 0 ID=cds-WP_012174883.1;Parent=gene-DOLE_RS07530;Dbxref=Genbank:WP_012174883.1;Name=WP_012174883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07530;product=glutamate--cysteine ligase GCS2;protein_id=WP_012174883.1;transl_table=11 NC_009943.1 RefSeq gene 1748780 1749037 . + . ID=gene-DOLE_RS07535;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=DOLE_RS07535;old_locus_tag=Dole_1464 NC_009943.1 Protein Homology CDS 1748780 1749037 . + 0 ID=cds-WP_153304501.1;Parent=gene-DOLE_RS07535;Dbxref=Genbank:WP_153304501.1;Name=WP_153304501.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458192.1;locus_tag=DOLE_RS07535;product=glutaredoxin 3;protein_id=WP_153304501.1;transl_table=11 NC_009943.1 RefSeq gene 1749074 1751158 . + . ID=gene-DOLE_RS07540;Name=DOLE_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07540;old_locus_tag=Dole_1465 NC_009943.1 Protein Homology CDS 1749074 1751158 . + 0 ID=cds-WP_041280433.1;Parent=gene-DOLE_RS07540;Dbxref=Genbank:WP_041280433.1;Name=WP_041280433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957652.1;locus_tag=DOLE_RS07540;product=ASKHA domain-containing protein;protein_id=WP_041280433.1;transl_table=11 NC_009943.1 RefSeq gene 1751286 1753100 . + . ID=gene-DOLE_RS07545;Name=DOLE_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07545;old_locus_tag=Dole_1466 NC_009943.1 GeneMarkS-2+ CDS 1751286 1753100 . + 0 ID=cds-WP_012174886.1;Parent=gene-DOLE_RS07545;Dbxref=Genbank:WP_012174886.1;Name=WP_012174886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07545;product=hypothetical protein;protein_id=WP_012174886.1;transl_table=11 NC_009943.1 RefSeq gene 1753113 1754006 . - . ID=gene-DOLE_RS07550;Name=DOLE_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07550;old_locus_tag=Dole_1467 NC_009943.1 Protein Homology CDS 1753113 1754006 . - 0 ID=cds-WP_012174887.1;Parent=gene-DOLE_RS07550;Dbxref=Genbank:WP_012174887.1;Name=WP_012174887.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968800.1;locus_tag=DOLE_RS07550;product=TIGR01777 family oxidoreductase;protein_id=WP_012174887.1;transl_table=11 NC_009943.1 RefSeq gene 1754179 1754994 . - . ID=gene-DOLE_RS07555;Name=DOLE_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07555;old_locus_tag=Dole_1468 NC_009943.1 Protein Homology CDS 1754179 1754994 . - 0 ID=cds-WP_012174888.1;Parent=gene-DOLE_RS07555;Dbxref=Genbank:WP_012174888.1;Name=WP_012174888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS07555;product=MBL fold metallo-hydrolase;protein_id=WP_012174888.1;transl_table=11 NC_009943.1 RefSeq gene 1755076 1756014 . - . ID=gene-DOLE_RS07560;Name=DOLE_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07560;old_locus_tag=Dole_1469 NC_009943.1 Protein Homology CDS 1755076 1756014 . - 0 ID=cds-WP_153304389.1;Parent=gene-DOLE_RS07560;Dbxref=Genbank:WP_153304389.1;Name=WP_153304389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS07560;product=MBL fold metallo-hydrolase;protein_id=WP_153304389.1;transl_table=11 NC_009943.1 RefSeq gene 1756083 1758863 . - . ID=gene-DOLE_RS17260;Name=DOLE_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17260;old_locus_tag=Dole_1470 NC_009943.1 Protein Homology CDS 1756083 1758863 . - 0 ID=cds-WP_012174890.1;Parent=gene-DOLE_RS17260;Dbxref=Genbank:WP_012174890.1;Name=WP_012174890.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025885.2;locus_tag=DOLE_RS17260;product=sigma 54-interacting transcriptional regulator;protein_id=WP_012174890.1;transl_table=11 NC_009943.1 RefSeq gene 1758949 1759323 . + . ID=gene-DOLE_RS07570;Name=DOLE_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07570;old_locus_tag=Dole_1471 NC_009943.1 GeneMarkS-2+ CDS 1758949 1759323 . + 0 ID=cds-WP_153304390.1;Parent=gene-DOLE_RS07570;Dbxref=Genbank:WP_153304390.1;Name=WP_153304390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07570;product=hypothetical protein;protein_id=WP_153304390.1;transl_table=11 NC_009943.1 RefSeq gene 1759517 1760770 . + . ID=gene-DOLE_RS07575;Name=DOLE_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07575;old_locus_tag=Dole_1472 NC_009943.1 Protein Homology CDS 1759517 1760770 . + 0 ID=cds-WP_012174892.1;Parent=gene-DOLE_RS07575;Dbxref=Genbank:WP_012174892.1;Name=WP_012174892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948569.1;locus_tag=DOLE_RS07575;product=thiolase family protein;protein_id=WP_012174892.1;transl_table=11 NC_009943.1 RefSeq gene 1760904 1762514 . + . ID=gene-DOLE_RS07580;Name=DOLE_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07580;old_locus_tag=Dole_1473 NC_009943.1 Protein Homology CDS 1760904 1762514 . + 0 ID=cds-WP_012174893.1;Parent=gene-DOLE_RS07580;Dbxref=Genbank:WP_012174893.1;Name=WP_012174893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610976.1;locus_tag=DOLE_RS07580;product=AMP-binding protein;protein_id=WP_012174893.1;transl_table=11 NC_009943.1 RefSeq gene 1762579 1763583 . + . ID=gene-DOLE_RS07585;Name=DOLE_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07585;old_locus_tag=Dole_1474 NC_009943.1 Protein Homology CDS 1762579 1763583 . + 0 ID=cds-WP_012174894.1;Parent=gene-DOLE_RS07585;Dbxref=Genbank:WP_012174894.1;Name=WP_012174894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610975.1;locus_tag=DOLE_RS07585;product=nitroreductase family protein;protein_id=WP_012174894.1;transl_table=11 NC_009943.1 RefSeq gene 1763724 1764539 . + . ID=gene-DOLE_RS07590;Name=DOLE_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07590;old_locus_tag=Dole_1475 NC_009943.1 Protein Homology CDS 1763724 1764539 . + 0 ID=cds-WP_052294275.1;Parent=gene-DOLE_RS07590;Dbxref=Genbank:WP_052294275.1;Name=WP_052294275.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=DOLE_RS07590;product=SDR family oxidoreductase;protein_id=WP_052294275.1;transl_table=11 NC_009943.1 RefSeq gene 1764688 1766208 . + . ID=gene-DOLE_RS07595;Name=DOLE_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07595;old_locus_tag=Dole_1476 NC_009943.1 Protein Homology CDS 1764688 1766208 . + 0 ID=cds-WP_012174896.1;Parent=gene-DOLE_RS07595;Dbxref=Genbank:WP_012174896.1;Name=WP_012174896.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036848.2;locus_tag=DOLE_RS07595;product=acetyl-CoA acetyltransferase;protein_id=WP_012174896.1;transl_table=11 NC_009943.1 RefSeq gene 1766238 1766552 . - . ID=gene-DOLE_RS07600;Name=DOLE_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07600;old_locus_tag=Dole_1477 NC_009943.1 Protein Homology CDS 1766238 1766552 . - 0 ID=cds-WP_012174897.1;Parent=gene-DOLE_RS07600;Dbxref=Genbank:WP_012174897.1;Name=WP_012174897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963856.1;locus_tag=DOLE_RS07600;product=DUF2442 domain-containing protein;protein_id=WP_012174897.1;transl_table=11 NC_009943.1 RefSeq gene 1766566 1766826 . - . ID=gene-DOLE_RS17930;Name=DOLE_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17930;old_locus_tag=Dole_1478 NC_009943.1 Protein Homology CDS 1766566 1766826 . - 0 ID=cds-WP_012174898.1;Parent=gene-DOLE_RS17930;Dbxref=Genbank:WP_012174898.1;Name=WP_012174898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073899.1;locus_tag=DOLE_RS17930;product=DUF4160 domain-containing protein;protein_id=WP_012174898.1;transl_table=11 NC_009943.1 RefSeq gene 1766992 1767279 . - . ID=gene-DOLE_RS07610;Name=DOLE_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07610;old_locus_tag=Dole_1479 NC_009943.1 GeneMarkS-2+ CDS 1766992 1767279 . - 0 ID=cds-WP_041280435.1;Parent=gene-DOLE_RS07610;Dbxref=Genbank:WP_041280435.1;Name=WP_041280435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07610;product=hypothetical protein;protein_id=WP_041280435.1;transl_table=11 NC_009943.1 RefSeq gene 1767572 1769329 . - . ID=gene-DOLE_RS07615;Name=DOLE_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07615;old_locus_tag=Dole_1480 NC_009943.1 Protein Homology CDS 1767572 1769329 . - 0 ID=cds-WP_012174900.1;Parent=gene-DOLE_RS07615;Dbxref=Genbank:WP_012174900.1;Name=WP_012174900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS07615;product=B12-binding domain-containing radical SAM protein;protein_id=WP_012174900.1;transl_table=11 NC_009943.1 RefSeq gene 1769690 1770049 . - . ID=gene-DOLE_RS07620;Name=DOLE_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07620;old_locus_tag=Dole_1481 NC_009943.1 Protein Homology CDS 1769690 1770049 . - 0 ID=cds-WP_012174901.1;Parent=gene-DOLE_RS07620;Dbxref=Genbank:WP_012174901.1;Name=WP_012174901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589112.1;locus_tag=DOLE_RS07620;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=WP_012174901.1;transl_table=11 NC_009943.1 RefSeq gene 1770066 1770674 . - . ID=gene-DOLE_RS07625;Name=DOLE_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07625;old_locus_tag=Dole_1482 NC_009943.1 Protein Homology CDS 1770066 1770674 . - 0 ID=cds-WP_012174902.1;Parent=gene-DOLE_RS07625;Dbxref=Genbank:WP_012174902.1;Name=WP_012174902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964914.1;locus_tag=DOLE_RS07625;product=DUF3786 domain-containing protein;protein_id=WP_012174902.1;transl_table=11 NC_009943.1 RefSeq gene 1770950 1771663 . - . ID=gene-DOLE_RS07630;Name=DOLE_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07630;old_locus_tag=Dole_1483 NC_009943.1 Protein Homology CDS 1770950 1771663 . - 0 ID=cds-WP_012174903.1;Parent=gene-DOLE_RS07630;Dbxref=Genbank:WP_012174903.1;Name=WP_012174903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012546.2;locus_tag=DOLE_RS07630;product=alpha/beta fold hydrolase;protein_id=WP_012174903.1;transl_table=11 NC_009943.1 RefSeq gene 1772152 1773147 . - . ID=gene-DOLE_RS07635;Name=DOLE_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07635;old_locus_tag=Dole_1484 NC_009943.1 Protein Homology CDS 1772152 1773147 . - 0 ID=cds-WP_012174904.1;Parent=gene-DOLE_RS07635;Dbxref=Genbank:WP_012174904.1;Name=WP_012174904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013698.2;locus_tag=DOLE_RS07635;product=IS110 family transposase;protein_id=WP_012174904.1;transl_table=11 NC_009943.1 RefSeq gene 1773194 1774807 . - . ID=gene-DOLE_RS07640;Name=DOLE_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07640;old_locus_tag=Dole_1485 NC_009943.1 Protein Homology CDS 1773194 1774807 . - 0 ID=cds-WP_012174905.1;Parent=gene-DOLE_RS07640;Dbxref=Genbank:WP_012174905.1;Name=WP_012174905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904917.1;locus_tag=DOLE_RS07640;product=ASKHA domain-containing protein;protein_id=WP_012174905.1;transl_table=11 NC_009943.1 RefSeq gene 1774835 1775674 . - . ID=gene-DOLE_RS07645;Name=DOLE_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07645;old_locus_tag=Dole_1486 NC_009943.1 Protein Homology CDS 1774835 1775674 . - 0 ID=cds-WP_012174906.1;Parent=gene-DOLE_RS07645;Dbxref=Genbank:WP_012174906.1;Name=WP_012174906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610241.1;locus_tag=DOLE_RS07645;product=MBL fold metallo-hydrolase;protein_id=WP_012174906.1;transl_table=11 NC_009943.1 RefSeq gene 1775744 1776601 . - . ID=gene-DOLE_RS17265;Name=DOLE_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17265;old_locus_tag=Dole_1487 NC_009943.1 Protein Homology CDS 1775744 1776601 . - 0 ID=cds-WP_012174907.1;Parent=gene-DOLE_RS17265;Dbxref=Genbank:WP_012174907.1;Name=WP_012174907.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018076.2;locus_tag=DOLE_RS17265;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_012174907.1;transl_table=11 NC_009943.1 RefSeq gene 1776605 1777363 . - . ID=gene-DOLE_RS07655;Name=DOLE_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07655;old_locus_tag=Dole_1488 NC_009943.1 Protein Homology CDS 1776605 1777363 . - 0 ID=cds-WP_012174908.1;Parent=gene-DOLE_RS07655;Dbxref=Genbank:WP_012174908.1;Name=WP_012174908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877774.1;locus_tag=DOLE_RS07655;product=AAA family ATPase;protein_id=WP_012174908.1;transl_table=11 NC_009943.1 RefSeq gene 1777593 1778165 . + . ID=gene-DOLE_RS07660;Name=DOLE_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07660;old_locus_tag=Dole_1489 NC_009943.1 Protein Homology CDS 1777593 1778165 . + 0 ID=cds-WP_012174909.1;Parent=gene-DOLE_RS07660;Dbxref=Genbank:WP_012174909.1;Name=WP_012174909.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04211.1;locus_tag=DOLE_RS07660;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_012174909.1;transl_table=11 NC_009943.1 RefSeq gene 1778196 1779821 . + . ID=gene-DOLE_RS07665;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=DOLE_RS07665;old_locus_tag=Dole_1490 NC_009943.1 Protein Homology CDS 1778196 1779821 . + 0 ID=cds-WP_012174910.1;Parent=gene-DOLE_RS07665;Dbxref=Genbank:WP_012174910.1;Name=WP_012174910.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949058.1;locus_tag=DOLE_RS07665;product=L-aspartate oxidase;protein_id=WP_012174910.1;transl_table=11 NC_009943.1 RefSeq gene 1779825 1780556 . - . ID=gene-DOLE_RS07670;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=DOLE_RS07670;old_locus_tag=Dole_1491 NC_009943.1 Protein Homology CDS 1779825 1780556 . - 0 ID=cds-WP_012174911.1;Parent=gene-DOLE_RS07670;Dbxref=Genbank:WP_012174911.1;Name=WP_012174911.1;Ontology_term=GO:0042372,GO:0052624;gbkey=CDS;gene=ubiE;go_function=2-phytyl-1%2C4-naphthoquinone methyltransferase activity|0052624||IEA;go_process=phylloquinone biosynthetic process|0042372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965493.1;locus_tag=DOLE_RS07670;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_012174911.1;transl_table=11 NC_009943.1 RefSeq gene 1780684 1781781 . + . ID=gene-DOLE_RS07675;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=DOLE_RS07675;old_locus_tag=Dole_1492 NC_009943.1 Protein Homology CDS 1780684 1781781 . + 0 ID=cds-WP_012174912.1;Parent=gene-DOLE_RS07675;Dbxref=Genbank:WP_012174912.1;Name=WP_012174912.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588104.1;locus_tag=DOLE_RS07675;product=molecular chaperone DnaJ;protein_id=WP_012174912.1;transl_table=11 NC_009943.1 RefSeq gene 1781835 1782224 . + . ID=gene-DOLE_RS07680;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=DOLE_RS07680;old_locus_tag=Dole_1493 NC_009943.1 Protein Homology CDS 1781835 1782224 . + 0 ID=cds-WP_012174913.1;Parent=gene-DOLE_RS07680;Dbxref=Genbank:WP_012174913.1;Name=WP_012174913.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903045.1;locus_tag=DOLE_RS07680;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_012174913.1;transl_table=11 NC_009943.1 RefSeq gene 1782221 1783144 . + . ID=gene-DOLE_RS07685;Name=DOLE_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07685;old_locus_tag=Dole_1494 NC_009943.1 Protein Homology CDS 1782221 1783144 . + 0 ID=cds-WP_012174914.1;Parent=gene-DOLE_RS07685;Dbxref=Genbank:WP_012174914.1;Name=WP_012174914.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS07685;product=MBL fold metallo-hydrolase;protein_id=WP_012174914.1;transl_table=11 NC_009943.1 RefSeq gene 1783141 1784052 . + . ID=gene-DOLE_RS07690;Name=DOLE_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07690;old_locus_tag=Dole_1495 NC_009943.1 Protein Homology CDS 1783141 1784052 . + 0 ID=cds-WP_012174915.1;Parent=gene-DOLE_RS07690;Dbxref=Genbank:WP_012174915.1;Name=WP_012174915.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609944.1;locus_tag=DOLE_RS07690;product=dihydroorotate dehydrogenase;protein_id=WP_012174915.1;transl_table=11 NC_009943.1 RefSeq gene 1784142 1785341 . + . ID=gene-DOLE_RS07695;Name=DOLE_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07695;old_locus_tag=Dole_1496 NC_009943.1 Protein Homology CDS 1784142 1785341 . + 0 ID=cds-WP_012174916.1;Parent=gene-DOLE_RS07695;Dbxref=Genbank:WP_012174916.1;Name=WP_012174916.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=DOLE_RS07695;product=NADH:flavin oxidoreductase;protein_id=WP_012174916.1;transl_table=11 NC_009943.1 RefSeq gene 1785539 1787680 . - . ID=gene-DOLE_RS07700;Name=DOLE_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07700;old_locus_tag=Dole_1497 NC_009943.1 Protein Homology CDS 1785539 1787680 . - 0 ID=cds-WP_012174917.1;Parent=gene-DOLE_RS07700;Dbxref=Genbank:WP_012174917.1;Name=WP_012174917.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948980.1;locus_tag=DOLE_RS07700;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012174917.1;transl_table=11 NC_009943.1 RefSeq gene 1787765 1788214 . - . ID=gene-DOLE_RS07705;Name=DOLE_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07705;old_locus_tag=Dole_1498 NC_009943.1 Protein Homology CDS 1787765 1788214 . - 0 ID=cds-WP_012174918.1;Parent=gene-DOLE_RS07705;Dbxref=Genbank:WP_012174918.1;Name=WP_012174918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025892.2;locus_tag=DOLE_RS07705;product=PaaI family thioesterase;protein_id=WP_012174918.1;transl_table=11 NC_009943.1 RefSeq gene 1788636 1790543 . + . ID=gene-DOLE_RS07710;Name=DOLE_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07710;old_locus_tag=Dole_1499 NC_009943.1 Protein Homology CDS 1788636 1790543 . + 0 ID=cds-WP_012174919.1;Parent=gene-DOLE_RS07710;Dbxref=Genbank:WP_012174919.1;Name=WP_012174919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877043.1;locus_tag=DOLE_RS07710;product=propionyl-CoA synthetase;protein_id=WP_012174919.1;transl_table=11 NC_009943.1 RefSeq gene 1790776 1791849 . - . ID=gene-DOLE_RS07715;Name=DOLE_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07715;old_locus_tag=Dole_1500 NC_009943.1 Protein Homology CDS 1790776 1791849 . - 0 ID=cds-WP_012174920.1;Parent=gene-DOLE_RS07715;Dbxref=Genbank:WP_012174920.1;Name=WP_012174920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174548.1;locus_tag=DOLE_RS07715;product=GGDEF domain-containing protein;protein_id=WP_012174920.1;transl_table=11 NC_009943.1 RefSeq gene 1792143 1793168 . - . ID=gene-DOLE_RS07720;Name=DOLE_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07720;old_locus_tag=Dole_1501 NC_009943.1 Protein Homology CDS 1792143 1793168 . - 0 ID=cds-WP_012174921.1;Parent=gene-DOLE_RS07720;Dbxref=Genbank:WP_012174921.1;Name=WP_012174921.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS07720;product=radical SAM protein;protein_id=WP_012174921.1;transl_table=11 NC_009943.1 RefSeq gene 1793165 1793860 . - . ID=gene-DOLE_RS07725;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=DOLE_RS07725;old_locus_tag=Dole_1502 NC_009943.1 Protein Homology CDS 1793165 1793860 . - 0 ID=cds-WP_012174922.1;Parent=gene-DOLE_RS07725;Dbxref=Genbank:WP_012174922.1;Name=WP_012174922.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876118.1;locus_tag=DOLE_RS07725;product=ribonuclease III;protein_id=WP_012174922.1;transl_table=11 NC_009943.1 RefSeq gene 1793876 1794760 . - . ID=gene-DOLE_RS07730;Name=DOLE_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07730;old_locus_tag=Dole_1503 NC_009943.1 Protein Homology CDS 1793876 1794760 . - 0 ID=cds-WP_012174923.1;Parent=gene-DOLE_RS07730;Dbxref=Genbank:WP_012174923.1;Name=WP_012174923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876117.1;locus_tag=DOLE_RS07730;product=PHP domain-containing protein;protein_id=WP_012174923.1;transl_table=11 NC_009943.1 RefSeq gene 1794750 1795112 . - . ID=gene-DOLE_RS07735;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=DOLE_RS07735;old_locus_tag=Dole_1504 NC_009943.1 Protein Homology CDS 1794750 1795112 . - 0 ID=cds-WP_012174924.1;Parent=gene-DOLE_RS07735;Dbxref=Genbank:WP_012174924.1;Name=WP_012174924.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070554.1;locus_tag=DOLE_RS07735;product=RNA polymerase-binding protein DksA;protein_id=WP_012174924.1;transl_table=11 NC_009943.1 RefSeq gene 1795313 1795963 . + . ID=gene-DOLE_RS17270;Name=DOLE_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17270;old_locus_tag=Dole_1505 NC_009943.1 Protein Homology CDS 1795313 1795963 . + 0 ID=cds-WP_012174925.1;Parent=gene-DOLE_RS17270;Dbxref=Genbank:WP_012174925.1;Name=WP_012174925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015639.2;locus_tag=DOLE_RS17270;product=YkgJ family cysteine cluster protein;protein_id=WP_012174925.1;transl_table=11 NC_009943.1 RefSeq gene 1796092 1796931 . + . ID=gene-DOLE_RS07750;Name=DOLE_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07750;old_locus_tag=Dole_1506 NC_009943.1 Protein Homology CDS 1796092 1796931 . + 0 ID=cds-WP_012174926.1;Parent=gene-DOLE_RS07750;Dbxref=Genbank:WP_012174926.1;Name=WP_012174926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012611164.1;locus_tag=DOLE_RS07750;product=SDR family oxidoreductase;protein_id=WP_012174926.1;transl_table=11 NC_009943.1 RefSeq gene 1796928 1798307 . - . ID=gene-DOLE_RS07755;Name=DOLE_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07755;old_locus_tag=Dole_1507 NC_009943.1 Protein Homology CDS 1796928 1798307 . - 0 ID=cds-WP_012174927.1;Parent=gene-DOLE_RS07755;Dbxref=Genbank:WP_012174927.1;Name=WP_012174927.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024562.2;locus_tag=DOLE_RS07755;product=DUF3999 domain-containing protein;protein_id=WP_012174927.1;transl_table=11 NC_009943.1 RefSeq gene 1798304 1801153 . - . ID=gene-DOLE_RS07760;Name=DOLE_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07760;old_locus_tag=Dole_1508 NC_009943.1 Protein Homology CDS 1798304 1801153 . - 0 ID=cds-WP_012174928.1;Parent=gene-DOLE_RS07760;Dbxref=Genbank:WP_012174928.1;Name=WP_012174928.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021606.2;locus_tag=DOLE_RS07760;product=DUF2339 domain-containing protein;protein_id=WP_012174928.1;transl_table=11 NC_009943.1 RefSeq gene 1801382 1802218 . + . ID=gene-DOLE_RS07765;Name=DOLE_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07765;old_locus_tag=Dole_1509 NC_009943.1 Protein Homology CDS 1801382 1802218 . + 0 ID=cds-WP_012174929.1;Parent=gene-DOLE_RS07765;Dbxref=Genbank:WP_012174929.1;Name=WP_012174929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072893.1;locus_tag=DOLE_RS07765;product=cytidylate kinase family protein;protein_id=WP_012174929.1;transl_table=11 NC_009943.1 RefSeq gene 1802261 1803865 . + . ID=gene-DOLE_RS07770;Name=DOLE_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07770;old_locus_tag=Dole_1510 NC_009943.1 GeneMarkS-2+ CDS 1802261 1803865 . + 0 ID=cds-WP_012174930.1;Parent=gene-DOLE_RS07770;Dbxref=Genbank:WP_012174930.1;Name=WP_012174930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07770;product=PD40 domain-containing protein;protein_id=WP_012174930.1;transl_table=11 NC_009943.1 RefSeq gene 1804001 1804933 . + . ID=gene-DOLE_RS07775;Name=DOLE_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07775;old_locus_tag=Dole_1511 NC_009943.1 Protein Homology CDS 1804001 1804933 . + 0 ID=cds-WP_012174931.1;Parent=gene-DOLE_RS07775;Dbxref=Genbank:WP_012174931.1;Name=WP_012174931.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: protein motif:HMM:NF012981.2;locus_tag=DOLE_RS07775;product=diacylglycerol kinase family protein;protein_id=WP_012174931.1;transl_table=11 NC_009943.1 RefSeq gene 1805179 1806108 . - . ID=gene-DOLE_RS07780;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=DOLE_RS07780;old_locus_tag=Dole_1512 NC_009943.1 Protein Homology CDS 1805179 1806108 . - 0 ID=cds-WP_012174932.1;Parent=gene-DOLE_RS07780;Dbxref=Genbank:WP_012174932.1;Name=WP_012174932.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947172.1;locus_tag=DOLE_RS07780;product=thioredoxin-disulfide reductase;protein_id=WP_012174932.1;transl_table=11 NC_009943.1 RefSeq gene 1806113 1806442 . - . ID=gene-DOLE_RS07785;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=DOLE_RS07785;old_locus_tag=Dole_1513 NC_009943.1 Protein Homology CDS 1806113 1806442 . - 0 ID=cds-WP_012174933.1;Parent=gene-DOLE_RS07785;Dbxref=Genbank:WP_012174933.1;Name=WP_012174933.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947173.1;locus_tag=DOLE_RS07785;product=thioredoxin;protein_id=WP_012174933.1;transl_table=11 NC_009943.1 RefSeq gene 1806890 1808203 . + . ID=gene-DOLE_RS07790;Name=DOLE_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07790;old_locus_tag=Dole_1514 NC_009943.1 Protein Homology CDS 1806890 1808203 . + 0 ID=cds-WP_012174934.1;Parent=gene-DOLE_RS07790;Dbxref=Genbank:WP_012174934.1;Name=WP_012174934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948156.1;locus_tag=DOLE_RS07790;product=EAL domain-containing protein;protein_id=WP_012174934.1;transl_table=11 NC_009943.1 RefSeq gene 1808490 1809167 . + . ID=gene-DOLE_RS07795;Name=DOLE_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07795;old_locus_tag=Dole_1515 NC_009943.1 Protein Homology CDS 1808490 1809167 . + 0 ID=cds-WP_012174935.1;Parent=gene-DOLE_RS07795;Dbxref=Genbank:WP_012174935.1;Name=WP_012174935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073255.1;locus_tag=DOLE_RS07795;product=phosphoribosylaminoimidazolecarboxamide formyltransferase;protein_id=WP_012174935.1;transl_table=11 NC_009943.1 RefSeq gene 1809202 1810452 . + . ID=gene-DOLE_RS07800;Name=DOLE_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07800;old_locus_tag=Dole_1516 NC_009943.1 Protein Homology CDS 1809202 1810452 . + 0 ID=cds-WP_012174936.1;Parent=gene-DOLE_RS07800;Dbxref=Genbank:WP_012174936.1;Name=WP_012174936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585561.1;locus_tag=DOLE_RS07800;product=phosphoribosylaminoimidazolecarboxamide formyltransferase;protein_id=WP_012174936.1;transl_table=11 NC_009943.1 RefSeq gene 1810503 1810850 . + . ID=gene-DOLE_RS07805;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=DOLE_RS07805;old_locus_tag=Dole_1517 NC_009943.1 Protein Homology CDS 1810503 1810850 . + 0 ID=cds-WP_012174937.1;Parent=gene-DOLE_RS07805;Dbxref=Genbank:WP_012174937.1;Name=WP_012174937.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174937.1;locus_tag=DOLE_RS07805;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_012174937.1;transl_table=11 NC_009943.1 RefSeq gene 1810975 1812021 . + . ID=gene-DOLE_RS07810;Name=DOLE_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07810;old_locus_tag=Dole_1518 NC_009943.1 Protein Homology CDS 1810975 1812021 . + 0 ID=cds-WP_012174938.1;Parent=gene-DOLE_RS07810;Dbxref=Genbank:WP_012174938.1;Name=WP_012174938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015252.2;locus_tag=DOLE_RS07810;product=lipase chaperone family protein;protein_id=WP_012174938.1;transl_table=11 NC_009943.1 RefSeq gene 1812018 1813100 . + . ID=gene-DOLE_RS07815;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=DOLE_RS07815;old_locus_tag=Dole_1519 NC_009943.1 Protein Homology CDS 1812018 1813100 . + 0 ID=cds-WP_012174939.1;Parent=gene-DOLE_RS07815;Dbxref=Genbank:WP_012174939.1;Name=WP_012174939.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587300.1;locus_tag=DOLE_RS07815;product=A/G-specific adenine glycosylase;protein_id=WP_012174939.1;transl_table=11 NC_009943.1 RefSeq gene 1813134 1815467 . - . ID=gene-DOLE_RS07820;Name=DOLE_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07820;old_locus_tag=Dole_1520 NC_009943.1 Protein Homology CDS 1813134 1815467 . - 0 ID=cds-WP_012174940.1;Parent=gene-DOLE_RS07820;Dbxref=Genbank:WP_012174940.1;Name=WP_012174940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963858.1;locus_tag=DOLE_RS07820;product=PAS domain S-box protein;protein_id=WP_012174940.1;transl_table=11 NC_009943.1 RefSeq gene 1815500 1816015 . - . ID=gene-DOLE_RS07825;Name=DOLE_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07825;old_locus_tag=Dole_1521 NC_009943.1 Protein Homology CDS 1815500 1816015 . - 0 ID=cds-WP_012174941.1;Parent=gene-DOLE_RS07825;Dbxref=Genbank:WP_012174941.1;Name=WP_012174941.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024586.2;locus_tag=DOLE_RS07825;product=PAS domain-containing protein;protein_id=WP_012174941.1;transl_table=11 NC_009943.1 RefSeq gene 1816064 1816846 . - . ID=gene-DOLE_RS17275;Name=DOLE_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17275;old_locus_tag=Dole_1522 NC_009943.1 GeneMarkS-2+ CDS 1816064 1816846 . - 0 ID=cds-WP_012174942.1;Parent=gene-DOLE_RS17275;Dbxref=Genbank:WP_012174942.1;Name=WP_012174942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17275;product=tetratricopeptide repeat protein;protein_id=WP_012174942.1;transl_table=11 NC_009943.1 RefSeq gene 1816956 1817798 . - . ID=gene-DOLE_RS07835;Name=DOLE_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07835;old_locus_tag=Dole_1523 NC_009943.1 Protein Homology CDS 1816956 1817798 . - 0 ID=cds-WP_041280438.1;Parent=gene-DOLE_RS07835;Dbxref=Genbank:WP_041280438.1;Name=WP_041280438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015325.2;locus_tag=DOLE_RS07835;product=flavodoxin family protein;protein_id=WP_041280438.1;transl_table=11 NC_009943.1 RefSeq gene 1817952 1818965 . - . ID=gene-DOLE_RS07840;Name=amrS;gbkey=Gene;gene=amrS;gene_biotype=protein_coding;locus_tag=DOLE_RS07840;old_locus_tag=Dole_1524 NC_009943.1 Protein Homology CDS 1817952 1818965 . - 0 ID=cds-WP_012174944.1;Parent=gene-DOLE_RS07840;Dbxref=Genbank:WP_012174944.1;Name=WP_012174944.1;Ontology_term=GO:0051536;gbkey=CDS;gene=amrS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875298.1;locus_tag=DOLE_RS07840;product=AmmeMemoRadiSam system radical SAM enzyme;protein_id=WP_012174944.1;transl_table=11 NC_009943.1 RefSeq gene 1818946 1819767 . - . ID=gene-DOLE_RS07845;Name=DOLE_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07845;old_locus_tag=Dole_1525 NC_009943.1 Protein Homology CDS 1818946 1819767 . - 0 ID=cds-WP_012174945.1;Parent=gene-DOLE_RS07845;Dbxref=Genbank:WP_012174945.1;Name=WP_012174945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013382.2;locus_tag=DOLE_RS07845;product=class I SAM-dependent methyltransferase;protein_id=WP_012174945.1;transl_table=11 NC_009943.1 RefSeq gene 1820000 1821043 . + . ID=gene-DOLE_RS07850;Name=DOLE_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07850;old_locus_tag=Dole_1526 NC_009943.1 Protein Homology CDS 1820000 1821043 . + 0 ID=cds-WP_041280958.1;Parent=gene-DOLE_RS07850;Dbxref=Genbank:WP_041280958.1;Name=WP_041280958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948588.1;locus_tag=DOLE_RS07850;product=nitronate monooxygenase;protein_id=WP_041280958.1;transl_table=11 NC_009943.1 RefSeq gene 1821046 1822887 . - . ID=gene-DOLE_RS07855;Name=DOLE_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07855;old_locus_tag=Dole_1527 NC_009943.1 Protein Homology CDS 1821046 1822887 . - 0 ID=cds-WP_012174947.1;Parent=gene-DOLE_RS07855;Dbxref=Genbank:WP_012174947.1;Name=WP_012174947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=DOLE_RS07855;product=M48 family metallopeptidase;protein_id=WP_012174947.1;transl_table=11 NC_009943.1 RefSeq gene 1822979 1823569 . - . ID=gene-DOLE_RS07860;Name=DOLE_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07860;old_locus_tag=Dole_1528 NC_009943.1 Protein Homology CDS 1822979 1823569 . - 0 ID=cds-WP_012174948.1;Parent=gene-DOLE_RS07860;Dbxref=Genbank:WP_012174948.1;Name=WP_012174948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017866649.1;locus_tag=DOLE_RS07860;product=LemA family protein;protein_id=WP_012174948.1;transl_table=11 NC_009943.1 RefSeq gene 1823614 1824243 . - . ID=gene-DOLE_RS07865;Name=DOLE_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07865;old_locus_tag=Dole_1529 NC_009943.1 GeneMarkS-2+ CDS 1823614 1824243 . - 0 ID=cds-WP_012174949.1;Parent=gene-DOLE_RS07865;Dbxref=Genbank:WP_012174949.1;Name=WP_012174949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07865;product=rubredoxin;protein_id=WP_012174949.1;transl_table=11 NC_009943.1 RefSeq gene 1824294 1824503 . - . ID=gene-DOLE_RS07870;Name=DOLE_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07870;old_locus_tag=Dole_1530 NC_009943.1 Protein Homology CDS 1824294 1824503 . - 0 ID=cds-WP_012174950.1;Parent=gene-DOLE_RS07870;Dbxref=Genbank:WP_012174950.1;Name=WP_012174950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946906.1;locus_tag=DOLE_RS07870;product=hypothetical protein;protein_id=WP_012174950.1;transl_table=11 NC_009943.1 RefSeq gene 1824615 1825184 . - . ID=gene-DOLE_RS07875;Name=DOLE_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07875;old_locus_tag=Dole_1531 NC_009943.1 Protein Homology CDS 1824615 1825184 . - 0 ID=cds-WP_012174951.1;Parent=gene-DOLE_RS07875;Dbxref=Genbank:WP_012174951.1;Name=WP_012174951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174951.1;locus_tag=DOLE_RS07875;product=manganese efflux pump MntP family protein;protein_id=WP_012174951.1;transl_table=11 NC_009943.1 RefSeq gene 1825181 1827106 . - . ID=gene-DOLE_RS07880;Name=DOLE_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07880;old_locus_tag=Dole_1532 NC_009943.1 Protein Homology CDS 1825181 1827106 . - 0 ID=cds-WP_012174952.1;Parent=gene-DOLE_RS07880;Dbxref=Genbank:WP_012174952.1;Name=WP_012174952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015168.2;locus_tag=DOLE_RS07880;product=thioredoxin domain-containing protein;protein_id=WP_012174952.1;transl_table=11 NC_009943.1 RefSeq gene 1827103 1828461 . - . ID=gene-DOLE_RS17280;Name=DOLE_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17280;old_locus_tag=Dole_1533 NC_009943.1 Protein Homology CDS 1827103 1828461 . - 0 ID=cds-WP_012174953.1;Parent=gene-DOLE_RS17280;Dbxref=Genbank:WP_012174953.1;Name=WP_012174953.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=DOLE_RS17280;product=methyl-accepting chemotaxis protein;protein_id=WP_012174953.1;transl_table=11 NC_009943.1 RefSeq gene 1828579 1829436 . - . ID=gene-DOLE_RS07890;Name=DOLE_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07890;old_locus_tag=Dole_1534 NC_009943.1 Protein Homology CDS 1828579 1829436 . - 0 ID=cds-WP_012174954.1;Parent=gene-DOLE_RS07890;Dbxref=Genbank:WP_012174954.1;Name=WP_012174954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610744.1;locus_tag=DOLE_RS07890;product=alpha/beta hydrolase;protein_id=WP_012174954.1;transl_table=11 NC_009943.1 RefSeq gene 1829463 1830293 . - . ID=gene-DOLE_RS07895;Name=DOLE_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07895;old_locus_tag=Dole_1535 NC_009943.1 Protein Homology CDS 1829463 1830293 . - 0 ID=cds-WP_012174955.1;Parent=gene-DOLE_RS07895;Dbxref=Genbank:WP_012174955.1;Name=WP_012174955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957261.1;locus_tag=DOLE_RS07895;product=DUF3786 domain-containing protein;protein_id=WP_012174955.1;transl_table=11 NC_009943.1 RefSeq gene 1830474 1830929 . - . ID=gene-DOLE_RS07900;Name=DOLE_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07900;old_locus_tag=Dole_1536 NC_009943.1 Protein Homology CDS 1830474 1830929 . - 0 ID=cds-WP_012174956.1;Parent=gene-DOLE_RS07900;Dbxref=Genbank:WP_012174956.1;Name=WP_012174956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905866.1;locus_tag=DOLE_RS07900;product=ferritin family protein;protein_id=WP_012174956.1;transl_table=11 NC_009943.1 RefSeq gene 1830959 1831756 . - . ID=gene-DOLE_RS07905;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=DOLE_RS07905;old_locus_tag=Dole_1537 NC_009943.1 Protein Homology CDS 1830959 1831756 . - 0 ID=cds-WP_153304393.1;Parent=gene-DOLE_RS07905;Dbxref=Genbank:WP_153304393.1;Name=WP_153304393.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: protein motif:HMM:NF014671.2;locus_tag=DOLE_RS07905;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_153304393.1;transl_table=11 NC_009943.1 RefSeq gene 1831760 1832314 . - . ID=gene-DOLE_RS07910;Name=DOLE_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07910;old_locus_tag=Dole_1538 NC_009943.1 Protein Homology CDS 1831760 1832314 . - 0 ID=cds-WP_012174958.1;Parent=gene-DOLE_RS07910;Dbxref=Genbank:WP_012174958.1;Name=WP_012174958.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024976.2;locus_tag=DOLE_RS07910;product=type I restriction enzyme HsdR N-terminal domain-containing protein;protein_id=WP_012174958.1;transl_table=11 NC_009943.1 RefSeq gene 1832327 1832710 . - . ID=gene-DOLE_RS07915;Name=DOLE_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07915;old_locus_tag=Dole_1539 NC_009943.1 Protein Homology CDS 1832327 1832710 . - 0 ID=cds-WP_012174959.1;Parent=gene-DOLE_RS07915;Dbxref=Genbank:WP_012174959.1;Name=WP_012174959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906613.1;locus_tag=DOLE_RS07915;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_012174959.1;transl_table=11 NC_009943.1 RefSeq gene 1832738 1833946 . - . ID=gene-DOLE_RS07920;Name=DOLE_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07920;old_locus_tag=Dole_1540 NC_009943.1 Protein Homology CDS 1832738 1833946 . - 0 ID=cds-WP_012174960.1;Parent=gene-DOLE_RS07920;Dbxref=Genbank:WP_012174960.1;Name=WP_012174960.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF018696.2;locus_tag=DOLE_RS07920;product=methyltransferase domain-containing protein;protein_id=WP_012174960.1;transl_table=11 NC_009943.1 RefSeq gene 1834176 1835228 . + . ID=gene-DOLE_RS07925;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=DOLE_RS07925;old_locus_tag=Dole_1541 NC_009943.1 Protein Homology CDS 1834176 1835228 . + 0 ID=cds-WP_232362741.1;Parent=gene-DOLE_RS07925;Dbxref=Genbank:WP_232362741.1;Name=WP_232362741.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949419.1;locus_tag=DOLE_RS07925;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_232362741.1;transl_table=11 NC_009943.1 RefSeq gene 1835242 1836846 . - . ID=gene-DOLE_RS17285;Name=DOLE_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17285;old_locus_tag=Dole_1542 NC_009943.1 Protein Homology CDS 1835242 1836846 . - 0 ID=cds-WP_012174962.1;Parent=gene-DOLE_RS17285;Dbxref=Genbank:WP_012174962.1;Name=WP_012174962.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024816.2;locus_tag=DOLE_RS17285;product=tetratricopeptide repeat protein;protein_id=WP_012174962.1;transl_table=11 NC_009943.1 RefSeq gene 1836882 1838402 . - . ID=gene-DOLE_RS07935;Name=DOLE_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07935;old_locus_tag=Dole_1543 NC_009943.1 Protein Homology CDS 1836882 1838402 . - 0 ID=cds-WP_012174963.1;Parent=gene-DOLE_RS07935;Dbxref=Genbank:WP_012174963.1;Name=WP_012174963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959300.1;locus_tag=DOLE_RS07935;product=DUF1846 domain-containing protein;protein_id=WP_012174963.1;transl_table=11 NC_009943.1 RefSeq gene 1838491 1839252 . - . ID=gene-DOLE_RS07940;Name=DOLE_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07940;old_locus_tag=Dole_1544 NC_009943.1 Protein Homology CDS 1838491 1839252 . - 0 ID=cds-WP_012174964.1;Parent=gene-DOLE_RS07940;Dbxref=Genbank:WP_012174964.1;Name=WP_012174964.1;Ontology_term=GO:0003950;gbkey=CDS;go_function=NAD+ ADP-ribosyltransferase activity|0003950||IEA;inference=COORDINATES: protein motif:HMM:NF014001.2;locus_tag=DOLE_RS07940;product=RNA 2'-phosphotransferase;protein_id=WP_012174964.1;transl_table=11 NC_009943.1 RefSeq gene 1839342 1840625 . + . ID=gene-DOLE_RS07945;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=DOLE_RS07945;old_locus_tag=Dole_1545 NC_009943.1 Protein Homology CDS 1839342 1840625 . + 0 ID=cds-WP_012174965.1;Parent=gene-DOLE_RS07945;Dbxref=Genbank:WP_012174965.1;Name=WP_012174965.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174965.1;locus_tag=DOLE_RS07945;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_012174965.1;transl_table=11 NC_009943.1 RefSeq gene 1840668 1842305 . - . ID=gene-DOLE_RS07950;Name=DOLE_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07950;old_locus_tag=Dole_1546 NC_009943.1 Protein Homology CDS 1840668 1842305 . - 0 ID=cds-WP_012174966.1;Parent=gene-DOLE_RS07950;Dbxref=Genbank:WP_012174966.1;Name=WP_012174966.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS07950;product=response regulator;protein_id=WP_012174966.1;transl_table=11 NC_009943.1 RefSeq gene 1842302 1843306 . - . ID=gene-DOLE_RS07955;Name=DOLE_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07955;old_locus_tag=Dole_1547 NC_009943.1 GeneMarkS-2+ CDS 1842302 1843306 . - 0 ID=cds-WP_012174967.1;Parent=gene-DOLE_RS07955;Dbxref=Genbank:WP_012174967.1;Name=WP_012174967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS07955;product=class I SAM-dependent methyltransferase;protein_id=WP_012174967.1;transl_table=11 NC_009943.1 RefSeq gene 1843619 1844239 . + . ID=gene-DOLE_RS07960;Name=DOLE_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07960;old_locus_tag=Dole_1548 NC_009943.1 Protein Homology CDS 1843619 1844239 . + 0 ID=cds-WP_012174968.1;Parent=gene-DOLE_RS07960;Dbxref=Genbank:WP_012174968.1;Name=WP_012174968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947943.1;locus_tag=DOLE_RS07960;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012174968.1;transl_table=11 NC_009943.1 RefSeq gene 1844331 1846463 . + . ID=gene-DOLE_RS07965;Name=DOLE_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07965;old_locus_tag=Dole_1549 NC_009943.1 Protein Homology CDS 1844331 1846463 . + 0 ID=cds-WP_012174969.1;Parent=gene-DOLE_RS07965;Dbxref=Genbank:WP_012174969.1;Name=WP_012174969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947942.1;locus_tag=DOLE_RS07965;product=SDR family oxidoreductase;protein_id=WP_012174969.1;transl_table=11 NC_009943.1 RefSeq gene 1846529 1849270 . + . ID=gene-DOLE_RS07970;Name=DOLE_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07970;old_locus_tag=Dole_1550 NC_009943.1 Protein Homology CDS 1846529 1849270 . + 0 ID=cds-WP_012174970.1;Parent=gene-DOLE_RS07970;Dbxref=Genbank:WP_012174970.1;Name=WP_012174970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947941.1;locus_tag=DOLE_RS07970;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_012174970.1;transl_table=11 NC_009943.1 RefSeq gene 1849283 1850497 . + . ID=gene-DOLE_RS07975;Name=DOLE_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07975;old_locus_tag=Dole_1551 NC_009943.1 Protein Homology CDS 1849283 1850497 . + 0 ID=cds-WP_012174971.1;Parent=gene-DOLE_RS07975;Dbxref=Genbank:WP_012174971.1;Name=WP_012174971.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947940.1;locus_tag=DOLE_RS07975;product=acetyl-CoA acetyltransferase;protein_id=WP_012174971.1;transl_table=11 NC_009943.1 RefSeq gene 1850573 1851727 . + . ID=gene-DOLE_RS07980;Name=DOLE_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07980;old_locus_tag=Dole_1552 NC_009943.1 Protein Homology CDS 1850573 1851727 . + 0 ID=cds-WP_012174972.1;Parent=gene-DOLE_RS07980;Dbxref=Genbank:WP_012174972.1;Name=WP_012174972.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948065.1;locus_tag=DOLE_RS07980;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012174972.1;transl_table=11 NC_009943.1 RefSeq gene 1851747 1852892 . + . ID=gene-DOLE_RS07985;Name=DOLE_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07985;old_locus_tag=Dole_1553 NC_009943.1 Protein Homology CDS 1851747 1852892 . + 0 ID=cds-WP_012174973.1;Parent=gene-DOLE_RS07985;Dbxref=Genbank:WP_012174973.1;Name=WP_012174973.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948648.1;locus_tag=DOLE_RS07985;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012174973.1;transl_table=11 NC_009943.1 RefSeq gene 1853024 1854172 . + . ID=gene-DOLE_RS07990;Name=DOLE_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07990;old_locus_tag=Dole_1554 NC_009943.1 Protein Homology CDS 1853024 1854172 . + 0 ID=cds-WP_012174974.1;Parent=gene-DOLE_RS07990;Dbxref=Genbank:WP_012174974.1;Name=WP_012174974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905090.1;locus_tag=DOLE_RS07990;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_012174974.1;transl_table=11 NC_009943.1 RefSeq gene 1854172 1854810 . + . ID=gene-DOLE_RS07995;Name=DOLE_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS07995;old_locus_tag=Dole_1555 NC_009943.1 Protein Homology CDS 1854172 1854810 . + 0 ID=cds-WP_012174975.1;Parent=gene-DOLE_RS07995;Dbxref=Genbank:WP_012174975.1;Name=WP_012174975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586864.1;locus_tag=DOLE_RS07995;product=succinate dehydrogenase cytochrome b subunit;protein_id=WP_012174975.1;transl_table=11 NC_009943.1 RefSeq gene 1854832 1856745 . + . ID=gene-DOLE_RS08000;Name=DOLE_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08000;old_locus_tag=Dole_1556 NC_009943.1 Protein Homology CDS 1854832 1856745 . + 0 ID=cds-WP_012174976.1;Parent=gene-DOLE_RS08000;Dbxref=Genbank:WP_012174976.1;Name=WP_012174976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586865.1;locus_tag=DOLE_RS08000;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=WP_012174976.1;transl_table=11 NC_009943.1 RefSeq gene 1856745 1857500 . + . ID=gene-DOLE_RS08005;Name=DOLE_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08005;old_locus_tag=Dole_1557 NC_009943.1 Protein Homology CDS 1856745 1857500 . + 0 ID=cds-WP_012174977.1;Parent=gene-DOLE_RS08005;Dbxref=Genbank:WP_012174977.1;Name=WP_012174977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074346.1;locus_tag=DOLE_RS08005;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_012174977.1;transl_table=11 NC_009943.1 RefSeq gene 1857497 1858114 . + . ID=gene-DOLE_RS08010;Name=DOLE_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08010;old_locus_tag=Dole_1558 NC_009943.1 Protein Homology CDS 1857497 1858114 . + 0 ID=cds-WP_012174978.1;Parent=gene-DOLE_RS08010;Dbxref=Genbank:WP_012174978.1;Name=WP_012174978.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024258.2;locus_tag=DOLE_RS08010;product=metallophosphoesterase family protein;protein_id=WP_012174978.1;transl_table=11 NC_009943.1 RefSeq gene 1858359 1858985 . + . ID=gene-DOLE_RS08020;Name=DOLE_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08020;old_locus_tag=Dole_1559 NC_009943.1 GeneMarkS-2+ CDS 1858359 1858985 . + 0 ID=cds-WP_012174979.1;Parent=gene-DOLE_RS08020;Dbxref=Genbank:WP_012174979.1;Name=WP_012174979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08020;product=hypothetical protein;protein_id=WP_012174979.1;transl_table=11 NC_009943.1 RefSeq gene 1859189 1859836 . + . ID=gene-DOLE_RS08025;Name=DOLE_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08025;old_locus_tag=Dole_1560 NC_009943.1 GeneMarkS-2+ CDS 1859189 1859836 . + 0 ID=cds-WP_012174980.1;Parent=gene-DOLE_RS08025;Dbxref=Genbank:WP_012174980.1;Name=WP_012174980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08025;product=hypothetical protein;protein_id=WP_012174980.1;transl_table=11 NC_009943.1 RefSeq gene 1860020 1860799 . + . ID=gene-DOLE_RS08030;Name=DOLE_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08030;old_locus_tag=Dole_1561 NC_009943.1 Protein Homology CDS 1860020 1860799 . + 0 ID=cds-WP_208596994.1;Parent=gene-DOLE_RS08030;Dbxref=Genbank:WP_208596994.1;Name=WP_208596994.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=DOLE_RS08030;product=ATP-binding cassette domain-containing protein;protein_id=WP_208596994.1;transl_table=11 NC_009943.1 RefSeq gene 1860783 1861703 . + . ID=gene-DOLE_RS08035;Name=DOLE_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08035;old_locus_tag=Dole_1562 NC_009943.1 Protein Homology CDS 1860783 1861703 . + 0 ID=cds-WP_012174982.1;Parent=gene-DOLE_RS08035;Dbxref=Genbank:WP_012174982.1;Name=WP_012174982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587247.1;locus_tag=DOLE_RS08035;product=SufD family Fe-S cluster assembly protein;protein_id=WP_012174982.1;transl_table=11 NC_009943.1 RefSeq gene 1861786 1862583 . - . ID=gene-DOLE_RS08040;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=DOLE_RS08040;old_locus_tag=Dole_1563 NC_009943.1 Protein Homology CDS 1861786 1862583 . - 0 ID=cds-WP_012174983.1;Parent=gene-DOLE_RS08040;Dbxref=Genbank:WP_012174983.1;Name=WP_012174983.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174983.1;locus_tag=DOLE_RS08040;product=tryptophan synthase subunit alpha;protein_id=WP_012174983.1;transl_table=11 NC_009943.1 RefSeq gene 1862587 1863807 . - . ID=gene-DOLE_RS08045;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=DOLE_RS08045;old_locus_tag=Dole_1564 NC_009943.1 Protein Homology CDS 1862587 1863807 . - 0 ID=cds-WP_012174984.1;Parent=gene-DOLE_RS08045;Dbxref=Genbank:WP_012174984.1;Name=WP_012174984.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610569.1;locus_tag=DOLE_RS08045;product=tryptophan synthase subunit beta;protein_id=WP_012174984.1;transl_table=11 NC_009943.1 RefSeq gene 1863807 1864472 . - . ID=gene-DOLE_RS08050;Name=DOLE_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08050;old_locus_tag=Dole_1565 NC_009943.1 Protein Homology CDS 1863807 1864472 . - 0 ID=cds-WP_232362736.1;Parent=gene-DOLE_RS08050;Dbxref=Genbank:WP_232362736.1;Name=WP_232362736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610570.1;locus_tag=DOLE_RS08050;product=phosphoribosylanthranilate isomerase;protein_id=WP_232362736.1;transl_table=11 NC_009943.1 RefSeq gene 1864591 1865382 . - . ID=gene-DOLE_RS08055;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=DOLE_RS08055;old_locus_tag=Dole_1566 NC_009943.1 Protein Homology CDS 1864591 1865382 . - 0 ID=cds-WP_012174986.1;Parent=gene-DOLE_RS08055;Dbxref=Genbank:WP_012174986.1;Name=WP_012174986.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174986.1;locus_tag=DOLE_RS08055;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_012174986.1;transl_table=11 NC_009943.1 RefSeq gene 1865387 1866406 . - . ID=gene-DOLE_RS08060;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=DOLE_RS08060;old_locus_tag=Dole_1567 NC_009943.1 Protein Homology CDS 1865387 1866406 . - 0 ID=cds-WP_012174987.1;Parent=gene-DOLE_RS08060;Dbxref=Genbank:WP_012174987.1;Name=WP_012174987.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174987.1;locus_tag=DOLE_RS08060;product=anthranilate phosphoribosyltransferase;protein_id=WP_012174987.1;transl_table=11 NC_009943.1 RefSeq gene 1866430 1866993 . - . ID=gene-DOLE_RS08065;Name=DOLE_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08065;old_locus_tag=Dole_1568 NC_009943.1 Protein Homology CDS 1866430 1866993 . - 0 ID=cds-WP_012174988.1;Parent=gene-DOLE_RS08065;Dbxref=Genbank:WP_012174988.1;Name=WP_012174988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405133.1;locus_tag=DOLE_RS08065;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_012174988.1;transl_table=11 NC_009943.1 RefSeq gene 1867098 1868585 . - . ID=gene-DOLE_RS08070;Name=DOLE_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08070;old_locus_tag=Dole_1569 NC_009943.1 Protein Homology CDS 1867098 1868585 . - 0 ID=cds-WP_012174989.1;Parent=gene-DOLE_RS08070;Dbxref=Genbank:WP_012174989.1;Name=WP_012174989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903661.1;locus_tag=DOLE_RS08070;product=anthranilate synthase component I;protein_id=WP_012174989.1;transl_table=11 NC_009943.1 RefSeq gene 1869079 1870320 . + . ID=gene-DOLE_RS08075;Name=DOLE_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08075;old_locus_tag=Dole_1570 NC_009943.1 Protein Homology CDS 1869079 1870320 . + 0 ID=cds-WP_012174990.1;Parent=gene-DOLE_RS08075;Dbxref=Genbank:WP_012174990.1;Name=WP_012174990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174990.1;locus_tag=DOLE_RS08075;product=competence/damage-inducible protein A;protein_id=WP_012174990.1;transl_table=11 NC_009943.1 RefSeq gene 1870400 1871578 . + . ID=gene-DOLE_RS08080;Name=DOLE_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08080;old_locus_tag=Dole_1571 NC_009943.1 Protein Homology CDS 1870400 1871578 . + 0 ID=cds-WP_012174991.1;Parent=gene-DOLE_RS08080;Dbxref=Genbank:WP_012174991.1;Name=WP_012174991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014081.2;locus_tag=DOLE_RS08080;product=amidohydrolase family protein;protein_id=WP_012174991.1;transl_table=11 NC_009943.1 RefSeq gene 1871791 1872018 . + . ID=gene-DOLE_RS08085;Name=DOLE_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08085;old_locus_tag=Dole_1572 NC_009943.1 GeneMarkS-2+ CDS 1871791 1872018 . + 0 ID=cds-WP_012174992.1;Parent=gene-DOLE_RS08085;Dbxref=Genbank:WP_012174992.1;Name=WP_012174992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08085;product=hypothetical protein;protein_id=WP_012174992.1;transl_table=11 NC_009943.1 RefSeq gene 1872027 1873385 . - . ID=gene-DOLE_RS08090;Name=DOLE_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08090;old_locus_tag=Dole_1573 NC_009943.1 Protein Homology CDS 1872027 1873385 . - 0 ID=cds-WP_012174993.1;Parent=gene-DOLE_RS08090;Dbxref=Genbank:WP_012174993.1;Name=WP_012174993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610087.1;locus_tag=DOLE_RS08090;product=glycerate kinase;protein_id=WP_012174993.1;transl_table=11 NC_009943.1 RefSeq gene 1873651 1874205 . + . ID=gene-DOLE_RS08095;Name=DOLE_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08095;old_locus_tag=Dole_1574 NC_009943.1 Protein Homology CDS 1873651 1874205 . + 0 ID=cds-WP_012174994.1;Parent=gene-DOLE_RS08095;Dbxref=Genbank:WP_012174994.1;Name=WP_012174994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878239.1;locus_tag=DOLE_RS08095;product=YqgE/AlgH family protein;protein_id=WP_012174994.1;transl_table=11 NC_009943.1 RefSeq gene 1874541 1876814 . + . ID=gene-DOLE_RS08100;Name=DOLE_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08100;old_locus_tag=Dole_1575 NC_009943.1 Protein Homology CDS 1874541 1876814 . + 0 ID=cds-WP_012174995.1;Parent=gene-DOLE_RS08100;Dbxref=Genbank:WP_012174995.1;Name=WP_012174995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012570.2;locus_tag=DOLE_RS08100;product=dynamin family protein;protein_id=WP_012174995.1;transl_table=11 NC_009943.1 RefSeq gene 1876884 1877657 . + . ID=gene-DOLE_RS08105;Name=DOLE_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08105;old_locus_tag=Dole_1576 NC_009943.1 Protein Homology CDS 1876884 1877657 . + 0 ID=cds-WP_012174996.1;Parent=gene-DOLE_RS08105;Dbxref=Genbank:WP_012174996.1;Name=WP_012174996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609653.1;locus_tag=DOLE_RS08105;product=AAA family ATPase;protein_id=WP_012174996.1;transl_table=11 NC_009943.1 RefSeq gene 1877971 1878723 . - . ID=gene-DOLE_RS08110;Name=DOLE_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08110;old_locus_tag=Dole_1577 NC_009943.1 Protein Homology CDS 1877971 1878723 . - 0 ID=cds-WP_012174997.1;Parent=gene-DOLE_RS08110;Dbxref=Genbank:WP_012174997.1;Name=WP_012174997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013509.2;locus_tag=DOLE_RS08110;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_012174997.1;transl_table=11 NC_009943.1 RefSeq gene 1878829 1880637 . - . ID=gene-DOLE_RS17290;Name=DOLE_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17290;old_locus_tag=Dole_1578 NC_009943.1 Protein Homology CDS 1878829 1880637 . - 0 ID=cds-WP_012174998.1;Parent=gene-DOLE_RS17290;Dbxref=Genbank:WP_012174998.1;Name=WP_012174998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=DOLE_RS17290;product=serine/threonine-protein kinase;protein_id=WP_012174998.1;transl_table=11 NC_009943.1 RefSeq gene 1880793 1881596 . + . ID=gene-DOLE_RS08120;Name=DOLE_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08120;old_locus_tag=Dole_1579 NC_009943.1 Protein Homology CDS 1880793 1881596 . + 0 ID=cds-WP_012174999.1;Parent=gene-DOLE_RS08120;Dbxref=Genbank:WP_012174999.1;Name=WP_012174999.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967829.1;locus_tag=DOLE_RS08120;product=TIGR02757 family protein;protein_id=WP_012174999.1;transl_table=11 NC_009943.1 RefSeq gene 1881723 1882598 . + . ID=gene-DOLE_RS08125;Name=DOLE_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08125;old_locus_tag=Dole_1580 NC_009943.1 Protein Homology CDS 1881723 1882598 . + 0 ID=cds-WP_012175000.1;Parent=gene-DOLE_RS08125;Dbxref=Genbank:WP_012175000.1;Name=WP_012175000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905072.1;locus_tag=DOLE_RS08125;product=ARMT1-like domain-containing protein;protein_id=WP_012175000.1;transl_table=11 NC_009943.1 RefSeq gene 1882601 1883038 . + . ID=gene-DOLE_RS08130;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=DOLE_RS08130;old_locus_tag=Dole_1581 NC_009943.1 Protein Homology CDS 1882601 1883038 . + 0 ID=cds-WP_012175001.1;Parent=gene-DOLE_RS08130;Dbxref=Genbank:WP_012175001.1;Name=WP_012175001.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662431.1;locus_tag=DOLE_RS08130;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_012175001.1;transl_table=11 NC_009943.1 RefSeq gene 1883079 1885382 . + . ID=gene-DOLE_RS08135;Name=DOLE_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08135;old_locus_tag=Dole_1582 NC_009943.1 Protein Homology CDS 1883079 1885382 . + 0 ID=cds-WP_012175002.1;Parent=gene-DOLE_RS08135;Dbxref=Genbank:WP_012175002.1;Name=WP_012175002.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS08135;product=tetratricopeptide repeat protein;protein_id=WP_012175002.1;transl_table=11 NC_009943.1 RefSeq gene 1885419 1886564 . + . ID=gene-DOLE_RS08140;Name=DOLE_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08140;old_locus_tag=Dole_1583 NC_009943.1 GeneMarkS-2+ CDS 1885419 1886564 . + 0 ID=cds-WP_012175003.1;Parent=gene-DOLE_RS08140;Dbxref=Genbank:WP_012175003.1;Name=WP_012175003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08140;product=hypothetical protein;protein_id=WP_012175003.1;transl_table=11 NC_009943.1 RefSeq gene 1886735 1887874 . + . ID=gene-DOLE_RS08145;Name=DOLE_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08145;old_locus_tag=Dole_1584 NC_009943.1 Protein Homology CDS 1886735 1887874 . + 0 ID=cds-WP_012175004.1;Parent=gene-DOLE_RS08145;Dbxref=Genbank:WP_012175004.1;Name=WP_012175004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587808.1;locus_tag=DOLE_RS08145;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_012175004.1;transl_table=11 NC_009943.1 RefSeq gene 1887861 1889276 . + . ID=gene-DOLE_RS08150;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=DOLE_RS08150;old_locus_tag=Dole_1585 NC_009943.1 Protein Homology CDS 1887861 1889276 . + 0 ID=cds-WP_012175005.1;Parent=gene-DOLE_RS08150;Dbxref=Genbank:WP_012175005.1;Name=WP_012175005.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072981.1;locus_tag=DOLE_RS08150;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_012175005.1;transl_table=11 NC_009943.1 RefSeq gene 1889325 1889783 . - . ID=gene-DOLE_RS08155;Name=DOLE_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08155;old_locus_tag=Dole_1586 NC_009943.1 Protein Homology CDS 1889325 1889783 . - 0 ID=cds-WP_041280442.1;Parent=gene-DOLE_RS08155;Dbxref=Genbank:WP_041280442.1;Name=WP_041280442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587470.1;locus_tag=DOLE_RS08155;product=DNA-binding protein;protein_id=WP_041280442.1;transl_table=11 NC_009943.1 RefSeq gene 1890252 1890626 . + . ID=gene-DOLE_RS08160;Name=DOLE_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08160;old_locus_tag=Dole_1587 NC_009943.1 GeneMarkS-2+ CDS 1890252 1890626 . + 0 ID=cds-WP_012175007.1;Parent=gene-DOLE_RS08160;Dbxref=Genbank:WP_012175007.1;Name=WP_012175007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08160;product=hypothetical protein;protein_id=WP_012175007.1;transl_table=11 NC_009943.1 RefSeq gene 1890684 1891409 . + . ID=gene-DOLE_RS08165;Name=DOLE_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08165;old_locus_tag=Dole_1588 NC_009943.1 Protein Homology CDS 1890684 1891409 . + 0 ID=cds-WP_012175008.1;Parent=gene-DOLE_RS08165;Dbxref=Genbank:WP_012175008.1;Name=WP_012175008.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS08165;product=PilZ domain-containing protein;protein_id=WP_012175008.1;transl_table=11 NC_009943.1 RefSeq gene 1891532 1892368 . + . ID=gene-DOLE_RS17295;Name=DOLE_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17295;old_locus_tag=Dole_1589 NC_009943.1 Protein Homology CDS 1891532 1892368 . + 0 ID=cds-WP_052294277.1;Parent=gene-DOLE_RS17295;Dbxref=Genbank:WP_052294277.1;Name=WP_052294277.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024109.2;locus_tag=DOLE_RS17295;product=alpha/beta hydrolase;protein_id=WP_052294277.1;transl_table=11 NC_009943.1 RefSeq gene 1892435 1893298 . + . ID=gene-DOLE_RS08175;Name=DOLE_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08175;old_locus_tag=Dole_1590 NC_009943.1 Protein Homology CDS 1892435 1893298 . + 0 ID=cds-WP_012175010.1;Parent=gene-DOLE_RS08175;Dbxref=Genbank:WP_012175010.1;Name=WP_012175010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948722.1;locus_tag=DOLE_RS08175;product=nitroreductase family protein;protein_id=WP_012175010.1;transl_table=11 NC_009943.1 RefSeq gene 1893395 1893889 . + . ID=gene-DOLE_RS08180;Name=DOLE_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08180;old_locus_tag=Dole_1591 NC_009943.1 GeneMarkS-2+ CDS 1893395 1893889 . + 0 ID=cds-WP_153304396.1;Parent=gene-DOLE_RS08180;Dbxref=Genbank:WP_153304396.1;Name=WP_153304396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08180;product=hypothetical protein;protein_id=WP_153304396.1;transl_table=11 NC_009943.1 RefSeq gene 1893912 1895114 . + . ID=gene-DOLE_RS08185;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=DOLE_RS08185;old_locus_tag=Dole_1592 NC_009943.1 Protein Homology CDS 1893912 1895114 . + 0 ID=cds-WP_012175012.1;Parent=gene-DOLE_RS08185;Dbxref=Genbank:WP_012175012.1;Name=WP_012175012.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072058.1;locus_tag=DOLE_RS08185;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_012175012.1;transl_table=11 NC_009943.1 RefSeq gene 1895186 1895878 . - . ID=gene-DOLE_RS08190;Name=DOLE_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08190;old_locus_tag=Dole_1593 NC_009943.1 Protein Homology CDS 1895186 1895878 . - 0 ID=cds-WP_012175013.1;Parent=gene-DOLE_RS08190;Dbxref=Genbank:WP_012175013.1;Name=WP_012175013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014523.2;locus_tag=DOLE_RS08190;product=MlaD family protein;protein_id=WP_012175013.1;transl_table=11 NC_009943.1 RefSeq gene 1896064 1896375 . + . ID=gene-DOLE_RS08195;Name=DOLE_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08195;old_locus_tag=Dole_1594 NC_009943.1 GeneMarkS-2+ CDS 1896064 1896375 . + 0 ID=cds-WP_012175014.1;Parent=gene-DOLE_RS08195;Dbxref=Genbank:WP_012175014.1;Name=WP_012175014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08195;product=hypothetical protein;protein_id=WP_012175014.1;transl_table=11 NC_009943.1 RefSeq gene 1896391 1898079 . - . ID=gene-DOLE_RS08200;Name=DOLE_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08200;old_locus_tag=Dole_1595 NC_009943.1 Protein Homology CDS 1896391 1898079 . - 0 ID=cds-WP_012175015.1;Parent=gene-DOLE_RS08200;Dbxref=Genbank:WP_012175015.1;Name=WP_012175015.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948191.1;locus_tag=DOLE_RS08200;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_012175015.1;transl_table=11 NC_009943.1 RefSeq gene 1898449 1899246 . - . ID=gene-DOLE_RS08205;Name=larE;gbkey=Gene;gene=larE;gene_biotype=protein_coding;locus_tag=DOLE_RS08205;old_locus_tag=Dole_1596 NC_009943.1 Protein Homology CDS 1898449 1899246 . - 0 ID=cds-WP_012175016.1;Parent=gene-DOLE_RS08205;Dbxref=Genbank:WP_012175016.1;Name=WP_012175016.1;Ontology_term=GO:0016783;gbkey=CDS;gene=larE;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: protein motif:HMM:TIGR00268.1;locus_tag=DOLE_RS08205;product=ATP-dependent sacrificial sulfur transferase LarE;protein_id=WP_012175016.1;transl_table=11 NC_009943.1 RefSeq gene 1899462 1900304 . + . ID=gene-DOLE_RS18505;Name=DOLE_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18505;old_locus_tag=Dole_1597 NC_009943.1 GeneMarkS-2+ CDS 1899462 1900304 . + 0 ID=cds-WP_012175017.1;Parent=gene-DOLE_RS18505;Dbxref=Genbank:WP_012175017.1;Name=WP_012175017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18505;product=hypothetical protein;protein_id=WP_012175017.1;transl_table=11 NC_009943.1 RefSeq gene 1900647 1902179 . + . ID=gene-DOLE_RS08215;Name=DOLE_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08215;old_locus_tag=Dole_1598 NC_009943.1 Protein Homology CDS 1900647 1902179 . + 0 ID=cds-WP_012175018.1;Parent=gene-DOLE_RS08215;Dbxref=Genbank:WP_012175018.1;Name=WP_012175018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876685.1;locus_tag=DOLE_RS08215;product=mercuric reductase;protein_id=WP_012175018.1;transl_table=11 NC_009943.1 RefSeq gene 1902258 1902779 . - . ID=gene-DOLE_RS08220;Name=DOLE_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08220;old_locus_tag=Dole_1599 NC_009943.1 Protein Homology CDS 1902258 1902779 . - 0 ID=cds-WP_012175019.1;Parent=gene-DOLE_RS08220;Dbxref=Genbank:WP_012175019.1;Name=WP_012175019.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.2;locus_tag=DOLE_RS08220;product=gamma carbonic anhydrase family protein;protein_id=WP_012175019.1;transl_table=11 NC_009943.1 RefSeq gene 1902785 1903651 . - . ID=gene-DOLE_RS08225;Name=DOLE_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08225;old_locus_tag=Dole_1600 NC_009943.1 Protein Homology CDS 1902785 1903651 . - 0 ID=cds-WP_012175020.1;Parent=gene-DOLE_RS08225;Dbxref=Genbank:WP_012175020.1;Name=WP_012175020.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=DOLE_RS08225;product=MerR family transcriptional regulator;protein_id=WP_012175020.1;transl_table=11 NC_009943.1 RefSeq gene 1903942 1905123 . + . ID=gene-DOLE_RS08230;Name=DOLE_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08230;old_locus_tag=Dole_1601 NC_009943.1 GeneMarkS-2+ CDS 1903942 1905123 . + 0 ID=cds-WP_012175021.1;Parent=gene-DOLE_RS08230;Dbxref=Genbank:WP_012175021.1;Name=WP_012175021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08230;product=thiolase family protein;protein_id=WP_012175021.1;transl_table=11 NC_009943.1 RefSeq gene 1905124 1905555 . + . ID=gene-DOLE_RS08235;Name=DOLE_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08235;old_locus_tag=Dole_1602 NC_009943.1 Protein Homology CDS 1905124 1905555 . + 0 ID=cds-WP_012175022.1;Parent=gene-DOLE_RS08235;Dbxref=Genbank:WP_012175022.1;Name=WP_012175022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948132.1;locus_tag=DOLE_RS08235;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_012175022.1;transl_table=11 NC_009943.1 RefSeq gene 1905565 1906332 . + . ID=gene-DOLE_RS08240;Name=DOLE_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08240;old_locus_tag=Dole_1603 NC_009943.1 Protein Homology CDS 1905565 1906332 . + 0 ID=cds-WP_012175023.1;Parent=gene-DOLE_RS08240;Dbxref=Genbank:WP_012175023.1;Name=WP_012175023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012596.2;locus_tag=DOLE_RS08240;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012175023.1;transl_table=11 NC_009943.1 RefSeq gene 1906346 1907509 . + . ID=gene-DOLE_RS08245;Name=DOLE_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08245;old_locus_tag=Dole_1604 NC_009943.1 Protein Homology CDS 1906346 1907509 . + 0 ID=cds-WP_012175024.1;Parent=gene-DOLE_RS08245;Dbxref=Genbank:WP_012175024.1;Name=WP_012175024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012656.2;locus_tag=DOLE_RS08245;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012175024.1;transl_table=11 NC_009943.1 RefSeq gene 1907526 1909106 . + . ID=gene-DOLE_RS08250;Name=DOLE_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08250;old_locus_tag=Dole_1605 NC_009943.1 Protein Homology CDS 1907526 1909106 . + 0 ID=cds-WP_012175025.1;Parent=gene-DOLE_RS08250;Dbxref=Genbank:WP_012175025.1;Name=WP_012175025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF004837.0;locus_tag=DOLE_RS08250;product=long-chain-fatty-acid--CoA ligase;protein_id=WP_012175025.1;transl_table=11 NC_009943.1 RefSeq gene 1909220 1910578 . + . ID=gene-DOLE_RS17300;Name=DOLE_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17300;old_locus_tag=Dole_1606 NC_009943.1 Protein Homology CDS 1909220 1910578 . + 0 ID=cds-WP_012175026.1;Parent=gene-DOLE_RS17300;Dbxref=Genbank:WP_012175026.1;Name=WP_012175026.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=DOLE_RS17300;product=NADH:flavin oxidoreductase;protein_id=WP_012175026.1;transl_table=11 NC_009943.1 RefSeq gene 1910680 1911678 . + . ID=gene-DOLE_RS08260;Name=DOLE_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08260;old_locus_tag=Dole_1607 NC_009943.1 Protein Homology CDS 1910680 1911678 . + 0 ID=cds-WP_012175027.1;Parent=gene-DOLE_RS08260;Dbxref=Genbank:WP_012175027.1;Name=WP_012175027.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016777.2;locus_tag=DOLE_RS08260;product=amidohydrolase family protein;protein_id=WP_012175027.1;transl_table=11 NC_009943.1 RefSeq gene 1911691 1912518 . + . ID=gene-DOLE_RS08265;Name=DOLE_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08265;old_locus_tag=Dole_1608 NC_009943.1 Protein Homology CDS 1911691 1912518 . + 0 ID=cds-WP_012175028.1;Parent=gene-DOLE_RS08265;Dbxref=Genbank:WP_012175028.1;Name=WP_012175028.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=DOLE_RS08265;product=SDR family oxidoreductase;protein_id=WP_012175028.1;transl_table=11 NC_009943.1 RefSeq gene 1912542 1913234 . + . ID=gene-DOLE_RS08270;Name=DOLE_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08270;old_locus_tag=Dole_1609 NC_009943.1 GeneMarkS-2+ CDS 1912542 1913234 . + 0 ID=cds-WP_012175029.1;Parent=gene-DOLE_RS08270;Dbxref=Genbank:WP_012175029.1;Name=WP_012175029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08270;product=hypothetical protein;protein_id=WP_012175029.1;transl_table=11 NC_009943.1 RefSeq gene 1913305 1915260 . + . ID=gene-DOLE_RS08275;Name=DOLE_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08275;old_locus_tag=Dole_1610 NC_009943.1 Protein Homology CDS 1913305 1915260 . + 0 ID=cds-WP_012175030.1;Parent=gene-DOLE_RS08275;Dbxref=Genbank:WP_012175030.1;Name=WP_012175030.1;Ontology_term=GO:0019287,GO:0030729;gbkey=CDS;go_function=acetoacetate-CoA ligase activity|0030729||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878005.1;locus_tag=DOLE_RS08275;product=acetoacetate--CoA ligase;protein_id=WP_012175030.1;transl_table=11 NC_009943.1 RefSeq gene 1915566 1916312 . + . ID=gene-DOLE_RS08280;Name=DOLE_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08280;old_locus_tag=Dole_1611 NC_009943.1 Protein Homology CDS 1915566 1916312 . + 0 ID=cds-WP_012175031.1;Parent=gene-DOLE_RS08280;Dbxref=Genbank:WP_012175031.1;Name=WP_012175031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022694.2;locus_tag=DOLE_RS08280;product=DUF3047 domain-containing protein;protein_id=WP_012175031.1;transl_table=11 NC_009943.1 RefSeq gene 1916317 1917642 . + . ID=gene-DOLE_RS17935;Name=DOLE_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17935;old_locus_tag=Dole_1612 NC_009943.1 Protein Homology CDS 1916317 1917642 . + 0 ID=cds-WP_012175032.1;Parent=gene-DOLE_RS17935;Dbxref=Genbank:WP_012175032.1;Name=WP_012175032.1;Ontology_term=GO:0009058,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:TIGR04283.1;locus_tag=DOLE_RS17935;product=TIGR04283 family arsenosugar biosynthesis glycosyltransferase;protein_id=WP_012175032.1;transl_table=11 NC_009943.1 RefSeq gene 1917887 1918459 . + . ID=gene-DOLE_RS08290;Name=DOLE_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08290;old_locus_tag=Dole_1613 NC_009943.1 GeneMarkS-2+ CDS 1917887 1918459 . + 0 ID=cds-WP_012175033.1;Parent=gene-DOLE_RS08290;Dbxref=Genbank:WP_012175033.1;Name=WP_012175033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08290;product=hypothetical protein;protein_id=WP_012175033.1;transl_table=11 NC_009943.1 RefSeq gene 1918597 1918857 . + . ID=gene-DOLE_RS08295;Name=DOLE_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08295;old_locus_tag=Dole_1614 NC_009943.1 GeneMarkS-2+ CDS 1918597 1918857 . + 0 ID=cds-WP_012175034.1;Parent=gene-DOLE_RS08295;Dbxref=Genbank:WP_012175034.1;Name=WP_012175034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08295;product=hypothetical protein;protein_id=WP_012175034.1;transl_table=11 NC_009943.1 RefSeq gene 1918916 1919602 . - . ID=gene-DOLE_RS08300;Name=DOLE_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08300;old_locus_tag=Dole_1615 NC_009943.1 Protein Homology CDS 1918916 1919602 . - 0 ID=cds-WP_012175035.1;Parent=gene-DOLE_RS08300;Dbxref=Genbank:WP_012175035.1;Name=WP_012175035.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS08300;product=response regulator;protein_id=WP_012175035.1;transl_table=11 NC_009943.1 RefSeq gene 1919775 1920341 . + . ID=gene-DOLE_RS08305;Name=DOLE_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08305;old_locus_tag=Dole_1616 NC_009943.1 Protein Homology CDS 1919775 1920341 . + 0 ID=cds-WP_012175036.1;Parent=gene-DOLE_RS08305;Dbxref=Genbank:WP_012175036.1;Name=WP_012175036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022112.2;locus_tag=DOLE_RS08305;product=GerMN domain-containing protein;protein_id=WP_012175036.1;transl_table=11 NC_009943.1 RefSeq gene 1920338 1922380 . + . ID=gene-DOLE_RS08310;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=DOLE_RS08310;old_locus_tag=Dole_1617 NC_009943.1 Protein Homology CDS 1920338 1922380 . + 0 ID=cds-WP_012175037.1;Parent=gene-DOLE_RS08310;Dbxref=Genbank:WP_012175037.1;Name=WP_012175037.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585502.1;locus_tag=DOLE_RS08310;product=elongation factor G;protein_id=WP_012175037.1;transl_table=11 NC_009943.1 RefSeq gene 1922536 1923459 . + . ID=gene-DOLE_RS08315;Name=DOLE_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08315;old_locus_tag=Dole_1618 NC_009943.1 Protein Homology CDS 1922536 1923459 . + 0 ID=cds-WP_041280972.1;Parent=gene-DOLE_RS08315;Dbxref=Genbank:WP_041280972.1;Name=WP_041280972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019474.2;locus_tag=DOLE_RS08315;product=alpha/beta hydrolase;protein_id=WP_041280972.1;transl_table=11 NC_009943.1 RefSeq gene 1923473 1925581 . - . ID=gene-DOLE_RS08320;Name=DOLE_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08320;old_locus_tag=Dole_1619 NC_009943.1 GeneMarkS-2+ CDS 1923473 1925581 . - 0 ID=cds-WP_012175039.1;Parent=gene-DOLE_RS08320;Dbxref=Genbank:WP_012175039.1;Name=WP_012175039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08320;product=hypothetical protein;protein_id=WP_012175039.1;transl_table=11 NC_009943.1 RefSeq gene 1925903 1926325 . + . ID=gene-DOLE_RS08325;Name=DOLE_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08325;old_locus_tag=Dole_1620 NC_009943.1 Protein Homology CDS 1925903 1926325 . + 0 ID=cds-WP_012175040.1;Parent=gene-DOLE_RS08325;Dbxref=Genbank:WP_012175040.1;Name=WP_012175040.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024854.2;locus_tag=DOLE_RS08325;product=MarR family transcriptional regulator;protein_id=WP_012175040.1;transl_table=11 NC_009943.1 RefSeq gene 1926385 1928625 . + . ID=gene-DOLE_RS08330;Name=DOLE_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08330;old_locus_tag=Dole_1621 NC_009943.1 Protein Homology CDS 1926385 1928625 . + 0 ID=cds-WP_012175041.1;Parent=gene-DOLE_RS08330;Dbxref=Genbank:WP_012175041.1;Name=WP_012175041.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609308.1;locus_tag=DOLE_RS08330;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012175041.1;transl_table=11 NC_009943.1 RefSeq gene 1928900 1929238 . + . ID=gene-DOLE_RS08335;Name=DOLE_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08335;old_locus_tag=Dole_1622 NC_009943.1 Protein Homology CDS 1928900 1929238 . + 0 ID=cds-WP_012175042.1;Parent=gene-DOLE_RS08335;Dbxref=Genbank:WP_012175042.1;Name=WP_012175042.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS08335;product=TIGR02266 family protein;protein_id=WP_012175042.1;transl_table=11 NC_009943.1 RefSeq gene 1929341 1929904 . + . ID=gene-DOLE_RS08340;Name=DOLE_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08340;old_locus_tag=Dole_1623 NC_009943.1 Protein Homology CDS 1929341 1929904 . + 0 ID=cds-WP_012175043.1;Parent=gene-DOLE_RS08340;Dbxref=Genbank:WP_012175043.1;Name=WP_012175043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174868.1;locus_tag=DOLE_RS08340;product=hypothetical protein;protein_id=WP_012175043.1;transl_table=11 NC_009943.1 RefSeq gene 1930387 1931868 . + . ID=gene-DOLE_RS08345;Name=DOLE_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08345;old_locus_tag=Dole_1624 NC_009943.1 Protein Homology CDS 1930387 1931868 . + 0 ID=cds-WP_012175044.1;Parent=gene-DOLE_RS08345;Dbxref=Genbank:WP_012175044.1;Name=WP_012175044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012887.2;locus_tag=DOLE_RS08345;product=molecular chaperone DnaJ;protein_id=WP_012175044.1;transl_table=11 NC_009943.1 RefSeq gene 1931979 1932851 . + . ID=gene-DOLE_RS08350;Name=DOLE_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08350;old_locus_tag=Dole_1625 NC_009943.1 Protein Homology CDS 1931979 1932851 . + 0 ID=cds-WP_012175045.1;Parent=gene-DOLE_RS08350;Dbxref=Genbank:WP_012175045.1;Name=WP_012175045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025056.2;locus_tag=DOLE_RS08350;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_012175045.1;transl_table=11 NC_009943.1 RefSeq gene 1932916 1933470 . + . ID=gene-DOLE_RS08355;Name=DOLE_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08355;old_locus_tag=Dole_1626 NC_009943.1 GeneMarkS-2+ CDS 1932916 1933470 . + 0 ID=cds-WP_012175046.1;Parent=gene-DOLE_RS08355;Dbxref=Genbank:WP_012175046.1;Name=WP_012175046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08355;product=hypothetical protein;protein_id=WP_012175046.1;transl_table=11 NC_009943.1 RefSeq gene 1933714 1935690 . - . ID=gene-DOLE_RS08360;Name=DOLE_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08360;old_locus_tag=Dole_1627 NC_009943.1 Protein Homology CDS 1933714 1935690 . - 0 ID=cds-WP_012175047.1;Parent=gene-DOLE_RS08360;Dbxref=Genbank:WP_012175047.1;Name=WP_012175047.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024116.2;locus_tag=DOLE_RS08360;product=ABC transporter permease;protein_id=WP_012175047.1;transl_table=11 NC_009943.1 RefSeq gene 1935841 1936815 . - . ID=gene-DOLE_RS08365;Name=DOLE_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08365;old_locus_tag=Dole_1628 NC_009943.1 Protein Homology CDS 1935841 1936815 . - 0 ID=cds-WP_167320862.1;Parent=gene-DOLE_RS08365;Dbxref=Genbank:WP_167320862.1;Name=WP_167320862.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024829.2;locus_tag=DOLE_RS08365;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_167320862.1;transl_table=11 NC_009943.1 RefSeq gene 1936802 1938118 . - . ID=gene-DOLE_RS08370;Name=DOLE_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08370;old_locus_tag=Dole_1629 NC_009943.1 Protein Homology CDS 1936802 1938118 . - 0 ID=cds-WP_012175049.1;Parent=gene-DOLE_RS08370;Dbxref=Genbank:WP_012175049.1;Name=WP_012175049.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=DOLE_RS08370;product=TolC family protein;protein_id=WP_012175049.1;transl_table=11 NC_009943.1 RefSeq gene 1938386 1939810 . - . ID=gene-DOLE_RS08375;Name=DOLE_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08375;old_locus_tag=Dole_1630 NC_009943.1 Protein Homology CDS 1938386 1939810 . - 0 ID=cds-WP_012175050.1;Parent=gene-DOLE_RS08375;Dbxref=Genbank:WP_012175050.1;Name=WP_012175050.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=DOLE_RS08375;product=M48 family metallopeptidase;protein_id=WP_012175050.1;transl_table=11 NC_009943.1 RefSeq gene 1939954 1940721 . + . ID=gene-DOLE_RS08380;Name=DOLE_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08380;old_locus_tag=Dole_1631 NC_009943.1 Protein Homology CDS 1939954 1940721 . + 0 ID=cds-WP_041280975.1;Parent=gene-DOLE_RS08380;Dbxref=Genbank:WP_041280975.1;Name=WP_041280975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905030.1;locus_tag=DOLE_RS08380;product=AAA family ATPase;protein_id=WP_041280975.1;transl_table=11 NC_009943.1 RefSeq gene 1940724 1941641 . + . ID=gene-DOLE_RS08385;Name=DOLE_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08385;old_locus_tag=Dole_1632 NC_009943.1 Protein Homology CDS 1940724 1941641 . + 0 ID=cds-WP_012175052.1;Parent=gene-DOLE_RS08385;Dbxref=Genbank:WP_012175052.1;Name=WP_012175052.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948458.1;locus_tag=DOLE_RS08385;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_012175052.1;transl_table=11 NC_009943.1 RefSeq gene 1941931 1942458 . + . ID=gene-DOLE_RS08390;Name=DOLE_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08390;old_locus_tag=Dole_1633 NC_009943.1 Protein Homology CDS 1941931 1942458 . + 0 ID=cds-WP_012175053.1;Parent=gene-DOLE_RS08390;Dbxref=Genbank:WP_012175053.1;Name=WP_012175053.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017774.2;locus_tag=DOLE_RS08390;product=NYN domain-containing protein;protein_id=WP_012175053.1;transl_table=11 NC_009943.1 RefSeq gene 1942689 1944080 . - . ID=gene-DOLE_RS08395;Name=DOLE_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08395;old_locus_tag=Dole_1634 NC_009943.1 Protein Homology CDS 1942689 1944080 . - 0 ID=cds-WP_012175054.1;Parent=gene-DOLE_RS08395;Dbxref=Genbank:WP_012175054.1;Name=WP_012175054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947329.1;locus_tag=DOLE_RS08395;product=multiheme c-type cytochrome;protein_id=WP_012175054.1;transl_table=11 NC_009943.1 RefSeq gene 1944101 1944634 . - . ID=gene-DOLE_RS08400;Name=DOLE_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08400;old_locus_tag=Dole_1635 NC_009943.1 Protein Homology CDS 1944101 1944634 . - 0 ID=cds-WP_041280443.1;Parent=gene-DOLE_RS08400;Dbxref=Genbank:WP_041280443.1;Name=WP_041280443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948316.1;locus_tag=DOLE_RS08400;product=NapC/NirT family cytochrome c;protein_id=WP_041280443.1;transl_table=11 NC_009943.1 RefSeq gene 1945027 1945896 . + . ID=gene-DOLE_RS08405;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=DOLE_RS08405;old_locus_tag=Dole_1636 NC_009943.1 Protein Homology CDS 1945027 1945896 . + 0 ID=cds-WP_012175056.1;Parent=gene-DOLE_RS08405;Dbxref=Genbank:WP_012175056.1;Name=WP_012175056.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: protein motif:HMM:TIGR00755.1;locus_tag=DOLE_RS08405;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_012175056.1;transl_table=11 NC_009943.1 RefSeq gene 1945899 1946306 . + . ID=gene-DOLE_RS08410;Name=DOLE_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08410;old_locus_tag=Dole_1637 NC_009943.1 Protein Homology CDS 1945899 1946306 . + 0 ID=cds-WP_012175057.1;Parent=gene-DOLE_RS08410;Dbxref=Genbank:WP_012175057.1;Name=WP_012175057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403794.1;locus_tag=DOLE_RS08410;product=hypothetical protein;protein_id=WP_012175057.1;transl_table=11 NC_009943.1 RefSeq gene 1946303 1947244 . + . ID=gene-DOLE_RS08415;Name=DOLE_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08415;old_locus_tag=Dole_1638 NC_009943.1 Protein Homology CDS 1946303 1947244 . + 0 ID=cds-WP_012175058.1;Parent=gene-DOLE_RS08415;Dbxref=Genbank:WP_012175058.1;Name=WP_012175058.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS08415;product=radical SAM protein;protein_id=WP_012175058.1;transl_table=11 NC_009943.1 RefSeq gene 1947265 1948197 . + . ID=gene-DOLE_RS08420;Name=DOLE_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08420;old_locus_tag=Dole_1639 NC_009943.1 Protein Homology CDS 1947265 1948197 . + 0 ID=cds-WP_012175059.1;Parent=gene-DOLE_RS08420;Dbxref=Genbank:WP_012175059.1;Name=WP_012175059.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037660.2;locus_tag=DOLE_RS08420;product=tetratricopeptide repeat protein;protein_id=WP_012175059.1;transl_table=11 NC_009943.1 RefSeq gene 1948266 1949486 . + . ID=gene-DOLE_RS08425;Name=DOLE_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08425;old_locus_tag=Dole_1640 NC_009943.1 Protein Homology CDS 1948266 1949486 . + 0 ID=cds-WP_012175060.1;Parent=gene-DOLE_RS08425;Dbxref=Genbank:WP_012175060.1;Name=WP_012175060.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=DOLE_RS08425;product=mechanosensitive ion channel;protein_id=WP_012175060.1;transl_table=11 NC_009943.1 RefSeq gene 1949517 1950281 . + . ID=gene-DOLE_RS08430;Name=DOLE_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08430;old_locus_tag=Dole_1641 NC_009943.1 Protein Homology CDS 1949517 1950281 . + 0 ID=cds-WP_012175061.1;Parent=gene-DOLE_RS08430;Dbxref=Genbank:WP_012175061.1;Name=WP_012175061.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016115.2;locus_tag=DOLE_RS08430;product=cyclase family protein;protein_id=WP_012175061.1;transl_table=11 NC_009943.1 RefSeq gene 1950313 1951350 . + . ID=gene-DOLE_RS17310;Name=DOLE_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17310;old_locus_tag=Dole_1642 NC_009943.1 Protein Homology CDS 1950313 1951350 . + 0 ID=cds-WP_012175062.1;Parent=gene-DOLE_RS17310;Dbxref=Genbank:WP_012175062.1;Name=WP_012175062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173597.1;locus_tag=DOLE_RS17310;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012175062.1;transl_table=11 NC_009943.1 RefSeq gene 1951350 1952498 . + . ID=gene-DOLE_RS08440;Name=DOLE_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08440;old_locus_tag=Dole_1643 NC_009943.1 Protein Homology CDS 1951350 1952498 . + 0 ID=cds-WP_012175063.1;Parent=gene-DOLE_RS08440;Dbxref=Genbank:WP_012175063.1;Name=WP_012175063.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF015400.2;locus_tag=DOLE_RS08440;product=saccharopine dehydrogenase NADP-binding domain-containing protein;protein_id=WP_012175063.1;transl_table=11 NC_009943.1 RefSeq gene 1952509 1953141 . + . ID=gene-DOLE_RS08445;Name=DOLE_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08445;old_locus_tag=Dole_1644 NC_009943.1 Protein Homology CDS 1952509 1953141 . + 0 ID=cds-WP_012175064.1;Parent=gene-DOLE_RS08445;Dbxref=Genbank:WP_012175064.1;Name=WP_012175064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947085.1;locus_tag=DOLE_RS08445;product=HD domain-containing protein;protein_id=WP_012175064.1;transl_table=11 NC_009943.1 RefSeq gene 1953170 1953937 . + . ID=gene-DOLE_RS08450;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=DOLE_RS08450;old_locus_tag=Dole_1645 NC_009943.1 Protein Homology CDS 1953170 1953937 . + 0 ID=cds-WP_153304506.1;Parent=gene-DOLE_RS08450;Dbxref=Genbank:WP_153304506.1;Name=WP_153304506.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875988.1;locus_tag=DOLE_RS08450;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_153304506.1;transl_table=11 NC_009943.1 RefSeq gene 1954134 1956332 . + . ID=gene-DOLE_RS08455;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=DOLE_RS08455;old_locus_tag=Dole_1646 NC_009943.1 Protein Homology CDS 1954134 1956332 . + 0 ID=cds-WP_012175066.1;Parent=gene-DOLE_RS08455;Dbxref=Genbank:WP_012175066.1;Name=WP_012175066.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175066.1;locus_tag=DOLE_RS08455;product=catalase/peroxidase HPI;protein_id=WP_012175066.1;transl_table=11 NC_009943.1 RefSeq gene 1956431 1957786 . - . ID=gene-DOLE_RS08460;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=DOLE_RS08460;old_locus_tag=Dole_1647 NC_009943.1 Protein Homology CDS 1956431 1957786 . - 0 ID=cds-WP_012175067.1;Parent=gene-DOLE_RS08460;Dbxref=Genbank:WP_012175067.1;Name=WP_012175067.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010993399.1;locus_tag=DOLE_RS08460;product=NADP-specific glutamate dehydrogenase;protein_id=WP_012175067.1;transl_table=11 NC_009943.1 RefSeq gene 1957891 1958472 . - . ID=gene-DOLE_RS08465;Name=DOLE_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08465;old_locus_tag=Dole_1648 NC_009943.1 GeneMarkS-2+ CDS 1957891 1958472 . - 0 ID=cds-WP_012175068.1;Parent=gene-DOLE_RS08465;Dbxref=Genbank:WP_012175068.1;Name=WP_012175068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08465;product=hypothetical protein;protein_id=WP_012175068.1;transl_table=11 NC_009943.1 RefSeq gene 1958747 1960195 . - . ID=gene-DOLE_RS08470;Name=DOLE_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08470;old_locus_tag=Dole_1649 NC_009943.1 Protein Homology CDS 1958747 1960195 . - 0 ID=cds-WP_208596995.1;Parent=gene-DOLE_RS08470;Dbxref=Genbank:WP_208596995.1;Name=WP_208596995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025885.2;locus_tag=DOLE_RS08470;product=sigma-54 dependent transcriptional regulator;protein_id=WP_208596995.1;transl_table=11 NC_009943.1 RefSeq gene 1960192 1962018 . - . ID=gene-DOLE_RS08475;Name=DOLE_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08475;old_locus_tag=Dole_1650 NC_009943.1 Protein Homology CDS 1960192 1962018 . - 0 ID=cds-WP_041280979.1;Parent=gene-DOLE_RS08475;Dbxref=Genbank:WP_041280979.1;Name=WP_041280979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014763.2;locus_tag=DOLE_RS08475;product=sensor histidine kinase;protein_id=WP_041280979.1;transl_table=11 NC_009943.1 RefSeq gene 1962085 1962915 . - . ID=gene-DOLE_RS08480;Name=DOLE_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08480;old_locus_tag=Dole_1651 NC_009943.1 Protein Homology CDS 1962085 1962915 . - 0 ID=cds-WP_012175071.1;Parent=gene-DOLE_RS08480;Dbxref=Genbank:WP_012175071.1;Name=WP_012175071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071306.1;locus_tag=DOLE_RS08480;product=ABC transporter ATP-binding protein;protein_id=WP_012175071.1;transl_table=11 NC_009943.1 RefSeq gene 1962912 1963985 . - . ID=gene-DOLE_RS08485;Name=DOLE_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08485;old_locus_tag=Dole_1652 NC_009943.1 Protein Homology CDS 1962912 1963985 . - 0 ID=cds-WP_012175072.1;Parent=gene-DOLE_RS08485;Dbxref=Genbank:WP_012175072.1;Name=WP_012175072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404968.1;locus_tag=DOLE_RS08485;product=iron ABC transporter permease;protein_id=WP_012175072.1;transl_table=11 NC_009943.1 RefSeq gene 1964000 1965160 . - . ID=gene-DOLE_RS08490;Name=DOLE_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08490;old_locus_tag=Dole_1653 NC_009943.1 Protein Homology CDS 1964000 1965160 . - 0 ID=cds-WP_012175073.1;Parent=gene-DOLE_RS08490;Dbxref=Genbank:WP_012175073.1;Name=WP_012175073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404967.1;locus_tag=DOLE_RS08490;product=iron ABC transporter substrate-binding protein;protein_id=WP_012175073.1;transl_table=11 NC_009943.1 RefSeq gene 1965543 1967807 . - . ID=gene-DOLE_RS08495;Name=DOLE_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08495;old_locus_tag=Dole_1654 NC_009943.1 Protein Homology CDS 1965543 1967807 . - 0 ID=cds-WP_012175074.1;Parent=gene-DOLE_RS08495;Dbxref=Genbank:WP_012175074.1;Name=WP_012175074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175255.1;locus_tag=DOLE_RS08495;product=O-antigen ligase family protein;protein_id=WP_012175074.1;transl_table=11 NC_009943.1 RefSeq gene 1968243 1968539 . - . ID=gene-DOLE_RS08500;Name=DOLE_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08500;old_locus_tag=Dole_1655 NC_009943.1 Protein Homology CDS 1968243 1968539 . - 0 ID=cds-WP_012175075.1;Parent=gene-DOLE_RS08500;Dbxref=Genbank:WP_012175075.1;Name=WP_012175075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176411.1;locus_tag=DOLE_RS08500;product=GIY-YIG nuclease family protein;protein_id=WP_012175075.1;transl_table=11 NC_009943.1 RefSeq gene 1968553 1968702 . + . ID=gene-DOLE_RS18205;Name=DOLE_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18205 NC_009943.1 GeneMarkS-2+ CDS 1968553 1968702 . + 0 ID=cds-WP_153304397.1;Parent=gene-DOLE_RS18205;Dbxref=Genbank:WP_153304397.1;Name=WP_153304397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18205;product=hypothetical protein;protein_id=WP_153304397.1;transl_table=11 NC_009943.1 RefSeq gene 1968731 1969417 . - . ID=gene-DOLE_RS08505;Name=DOLE_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08505;old_locus_tag=Dole_1656 NC_009943.1 Protein Homology CDS 1968731 1969417 . - 0 ID=cds-WP_012175076.1;Parent=gene-DOLE_RS08505;Dbxref=Genbank:WP_012175076.1;Name=WP_012175076.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039343.1;locus_tag=DOLE_RS08505;product=protein-tyrosine-phosphatase;protein_id=WP_012175076.1;transl_table=11 NC_009943.1 RefSeq gene 1969414 1971579 . - . ID=gene-DOLE_RS08510;Name=DOLE_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08510;old_locus_tag=Dole_1657 NC_009943.1 Protein Homology CDS 1969414 1971579 . - 0 ID=cds-WP_012175077.1;Parent=gene-DOLE_RS08510;Dbxref=Genbank:WP_012175077.1;Name=WP_012175077.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: protein motif:HMM:TIGR01007.1;locus_tag=DOLE_RS08510;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_012175077.1;transl_table=11 NC_009943.1 RefSeq gene 1971698 1972531 . - . ID=gene-DOLE_RS08515;Name=DOLE_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08515;old_locus_tag=Dole_1658 NC_009943.1 Protein Homology CDS 1971698 1972531 . - 0 ID=cds-WP_012175078.1;Parent=gene-DOLE_RS08515;Dbxref=Genbank:WP_012175078.1;Name=WP_012175078.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014606.2;locus_tag=DOLE_RS08515;product=SLBB domain-containing protein;protein_id=WP_012175078.1;transl_table=11 NC_009943.1 RefSeq gene 1972700 1973959 . - . ID=gene-DOLE_RS08520;Name=DOLE_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08520;old_locus_tag=Dole_1659 NC_009943.1 Protein Homology CDS 1972700 1973959 . - 0 ID=cds-WP_012175079.1;Parent=gene-DOLE_RS08520;Dbxref=Genbank:WP_012175079.1;Name=WP_012175079.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021589.2;locus_tag=DOLE_RS08520;product=outer membrane beta-barrel protein;protein_id=WP_012175079.1;transl_table=11 NC_009943.1 RefSeq gene 1974273 1976348 . - . ID=gene-DOLE_RS08525;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=DOLE_RS08525;old_locus_tag=Dole_1660 NC_009943.1 Protein Homology CDS 1974273 1976348 . - 0 ID=cds-WP_012175080.1;Parent=gene-DOLE_RS08525;Dbxref=Genbank:WP_012175080.1;Name=WP_012175080.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877546.1;locus_tag=DOLE_RS08525;product=elongation factor G;protein_id=WP_012175080.1;transl_table=11 NC_009943.1 RefSeq gene 1976451 1977209 . - . ID=gene-DOLE_RS08530;Name=DOLE_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08530;old_locus_tag=Dole_1661 NC_009943.1 Protein Homology CDS 1976451 1977209 . - 0 ID=cds-WP_012175081.1;Parent=gene-DOLE_RS08530;Dbxref=Genbank:WP_012175081.1;Name=WP_012175081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904427.1;locus_tag=DOLE_RS08530;product=TlyA family RNA methyltransferase;protein_id=WP_012175081.1;transl_table=11 NC_009943.1 RefSeq gene 1977295 1979175 . - . ID=gene-DOLE_RS08535;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=DOLE_RS08535;old_locus_tag=Dole_1662 NC_009943.1 Protein Homology CDS 1977295 1979175 . - 0 ID=cds-WP_012175082.1;Parent=gene-DOLE_RS08535;Dbxref=Genbank:WP_012175082.1;Name=WP_012175082.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588759.1;locus_tag=DOLE_RS08535;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_012175082.1;transl_table=11 NC_009943.1 RefSeq gene 1979186 1980073 . - . ID=gene-DOLE_RS08540;Name=DOLE_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08540;old_locus_tag=Dole_1663 NC_009943.1 Protein Homology CDS 1979186 1980073 . - 0 ID=cds-WP_012175083.1;Parent=gene-DOLE_RS08540;Dbxref=Genbank:WP_012175083.1;Name=WP_012175083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876973.1;locus_tag=DOLE_RS08540;product=polyprenyl synthetase family protein;protein_id=WP_012175083.1;transl_table=11 NC_009943.1 RefSeq gene 1980060 1980305 . - . ID=gene-DOLE_RS08545;Name=DOLE_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08545;old_locus_tag=Dole_1664 NC_009943.1 Protein Homology CDS 1980060 1980305 . - 0 ID=cds-WP_012175084.1;Parent=gene-DOLE_RS08545;Dbxref=Genbank:WP_012175084.1;Name=WP_012175084.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877543.1;locus_tag=DOLE_RS08545;product=exodeoxyribonuclease VII small subunit;protein_id=WP_012175084.1;transl_table=11 NC_009943.1 RefSeq gene 1980486 1981832 . - . ID=gene-DOLE_RS08550;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=DOLE_RS08550;old_locus_tag=Dole_1665 NC_009943.1 Protein Homology CDS 1980486 1981832 . - 0 ID=cds-WP_012175085.1;Parent=gene-DOLE_RS08550;Dbxref=Genbank:WP_012175085.1;Name=WP_012175085.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877542.1;locus_tag=DOLE_RS08550;product=exodeoxyribonuclease VII large subunit;protein_id=WP_012175085.1;transl_table=11 NC_009943.1 RefSeq gene 1982046 1982552 . + . ID=gene-DOLE_RS08555;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=DOLE_RS08555;old_locus_tag=Dole_1666 NC_009943.1 Protein Homology CDS 1982046 1982552 . + 0 ID=cds-WP_012175086.1;Parent=gene-DOLE_RS08555;Dbxref=Genbank:WP_012175086.1;Name=WP_012175086.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175086.1;locus_tag=DOLE_RS08555;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_012175086.1;transl_table=11 NC_009943.1 RefSeq gene 1982616 1984055 . + . ID=gene-DOLE_RS08560;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=DOLE_RS08560;old_locus_tag=Dole_1667 NC_009943.1 Protein Homology CDS 1982616 1984055 . + 0 ID=cds-WP_012175087.1;Parent=gene-DOLE_RS08560;Dbxref=Genbank:WP_012175087.1;Name=WP_012175087.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609913.1;locus_tag=DOLE_RS08560;product=cysteine--tRNA ligase;protein_id=WP_012175087.1;transl_table=11 NC_009943.1 RefSeq gene 1984359 1985138 . + . ID=gene-DOLE_RS08565;Name=DOLE_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08565;old_locus_tag=Dole_1668 NC_009943.1 Protein Homology CDS 1984359 1985138 . + 0 ID=cds-WP_012175088.1;Parent=gene-DOLE_RS08565;Dbxref=Genbank:WP_012175088.1;Name=WP_012175088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947672.1;locus_tag=DOLE_RS08565;product=EcsC family protein;protein_id=WP_012175088.1;transl_table=11 NC_009943.1 RefSeq gene 1985493 1986101 . + . ID=gene-DOLE_RS08570;Name=DOLE_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08570;old_locus_tag=Dole_1669 NC_009943.1 Protein Homology CDS 1985493 1986101 . + 0 ID=cds-WP_012175089.1;Parent=gene-DOLE_RS08570;Dbxref=Genbank:WP_012175089.1;Name=WP_012175089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875082.1;locus_tag=DOLE_RS08570;product=GAF domain-containing protein;protein_id=WP_012175089.1;transl_table=11 NC_009943.1 RefSeq gene 1986299 1986745 . + . ID=gene-DOLE_RS08575;Name=DOLE_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08575;old_locus_tag=Dole_1670 NC_009943.1 Protein Homology CDS 1986299 1986745 . + 0 ID=cds-WP_012175090.1;Parent=gene-DOLE_RS08575;Dbxref=Genbank:WP_012175090.1;Name=WP_012175090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016807.2;locus_tag=DOLE_RS08575;product=BLUF domain-containing protein;protein_id=WP_012175090.1;transl_table=11 NC_009943.1 RefSeq gene 1987119 1987769 . + . ID=gene-DOLE_RS08580;Name=DOLE_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08580;old_locus_tag=Dole_1671 NC_009943.1 Protein Homology CDS 1987119 1987769 . + 0 ID=cds-WP_012175091.1;Parent=gene-DOLE_RS08580;Dbxref=Genbank:WP_012175091.1;Name=WP_012175091.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016184.2;locus_tag=DOLE_RS08580;product=sulfur transferase domain-containing protein;protein_id=WP_012175091.1;transl_table=11 NC_009943.1 RefSeq gene 1987807 1989555 . - . ID=gene-DOLE_RS08585;Name=DOLE_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08585;old_locus_tag=Dole_1672 NC_009943.1 Protein Homology CDS 1987807 1989555 . - 0 ID=cds-WP_041280446.1;Parent=gene-DOLE_RS08585;Dbxref=Genbank:WP_041280446.1;Name=WP_041280446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610051.1;locus_tag=DOLE_RS08585;product=AMP-binding protein;protein_id=WP_041280446.1;transl_table=11 NC_009943.1 RefSeq gene 1990048 1991145 . + . ID=gene-DOLE_RS08590;Name=DOLE_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08590;old_locus_tag=Dole_1673 NC_009943.1 Protein Homology CDS 1990048 1991145 . + 0 ID=cds-WP_208596974.1;Parent=gene-DOLE_RS08590;Dbxref=Genbank:WP_208596974.1;Name=WP_208596974.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012766.2;locus_tag=DOLE_RS08590;product=aminopeptidase P family protein;protein_id=WP_208596974.1;transl_table=11 NC_009943.1 RefSeq gene 1991142 1992035 . + . ID=gene-DOLE_RS08595;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=DOLE_RS08595;old_locus_tag=Dole_1674 NC_009943.1 Protein Homology CDS 1991142 1992035 . + 0 ID=cds-WP_012175094.1;Parent=gene-DOLE_RS08595;Dbxref=Genbank:WP_012175094.1;Name=WP_012175094.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609969.1;locus_tag=DOLE_RS08595;product=site-specific tyrosine recombinase XerD;protein_id=WP_012175094.1;transl_table=11 NC_009943.1 RefSeq gene 1992248 1993921 . + . ID=gene-DOLE_RS08600;Name=DOLE_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08600;old_locus_tag=Dole_1675 NC_009943.1 Protein Homology CDS 1992248 1993921 . + 0 ID=cds-WP_012175095.1;Parent=gene-DOLE_RS08600;Dbxref=Genbank:WP_012175095.1;Name=WP_012175095.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876535.1;locus_tag=DOLE_RS08600;product=PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein;protein_id=WP_012175095.1;transl_table=11 NC_009943.1 RefSeq gene 1994060 2000629 . + . ID=gene-DOLE_RS08605;Name=DOLE_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08605;old_locus_tag=Dole_1676 NC_009943.1 Protein Homology CDS 1994060 2000629 . + 0 ID=cds-WP_012175096.1;Parent=gene-DOLE_RS08605;Dbxref=Genbank:WP_012175096.1;Name=WP_012175096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012901.2;locus_tag=DOLE_RS08605;product=type I polyketide synthase;protein_id=WP_012175096.1;transl_table=11 NC_009943.1 RefSeq gene 2000749 2007879 . + . ID=gene-DOLE_RS08610;Name=DOLE_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08610;old_locus_tag=Dole_1677 NC_009943.1 Protein Homology CDS 2000749 2007879 . + 0 ID=cds-WP_012175097.1;Parent=gene-DOLE_RS08610;Dbxref=Genbank:WP_012175097.1;Name=WP_012175097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=DOLE_RS08610;product=type I polyketide synthase;protein_id=WP_012175097.1;transl_table=11 NC_009943.1 RefSeq gene 2007903 2009780 . - . ID=gene-DOLE_RS17315;Name=DOLE_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17315;old_locus_tag=Dole_1678 NC_009943.1 Protein Homology CDS 2007903 2009780 . - 0 ID=cds-WP_012175098.1;Parent=gene-DOLE_RS17315;Dbxref=Genbank:WP_012175098.1;Name=WP_012175098.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DOLE_RS17315;product=PAS domain S-box protein;protein_id=WP_012175098.1;transl_table=11 NC_009943.1 RefSeq gene 2009987 2010238 . + . ID=gene-DOLE_RS08620;Name=DOLE_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08620;old_locus_tag=Dole_1679 NC_009943.1 Protein Homology CDS 2009987 2010238 . + 0 ID=cds-WP_041280447.1;Parent=gene-DOLE_RS08620;Dbxref=Genbank:WP_041280447.1;Name=WP_041280447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947153.1;locus_tag=DOLE_RS08620;product=zinc ribbon domain-containing protein;protein_id=WP_041280447.1;transl_table=11 NC_009943.1 RefSeq gene 2010290 2010517 . + . ID=gene-DOLE_RS08625;Name=DOLE_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08625;old_locus_tag=Dole_1680 NC_009943.1 Protein Homology CDS 2010290 2010517 . + 0 ID=cds-WP_012175100.1;Parent=gene-DOLE_RS08625;Dbxref=Genbank:WP_012175100.1;Name=WP_012175100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877075.1;locus_tag=DOLE_RS08625;product=hypothetical protein;protein_id=WP_012175100.1;transl_table=11 NC_009943.1 RefSeq gene 2010533 2010964 . - . ID=gene-DOLE_RS08630;Name=DOLE_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08630;old_locus_tag=Dole_1681 NC_009943.1 Protein Homology CDS 2010533 2010964 . - 0 ID=cds-WP_012175101.1;Parent=gene-DOLE_RS08630;Dbxref=Genbank:WP_012175101.1;Name=WP_012175101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878075.1;locus_tag=DOLE_RS08630;product=hypothetical protein;protein_id=WP_012175101.1;transl_table=11 NC_009943.1 RefSeq gene 2010986 2013235 . - . ID=gene-DOLE_RS17320;Name=DOLE_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17320;old_locus_tag=Dole_1682 NC_009943.1 Protein Homology CDS 2010986 2013235 . - 0 ID=cds-WP_012175102.1;Parent=gene-DOLE_RS17320;Dbxref=Genbank:WP_012175102.1;Name=WP_012175102.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF019315.2;locus_tag=DOLE_RS17320;product=methyl-accepting chemotaxis protein;protein_id=WP_012175102.1;transl_table=11 NC_009943.1 RefSeq gene 2013319 2014233 . - . ID=gene-DOLE_RS08640;Name=DOLE_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08640;old_locus_tag=Dole_1683 NC_009943.1 Protein Homology CDS 2013319 2014233 . - 0 ID=cds-WP_012175103.1;Parent=gene-DOLE_RS08640;Dbxref=Genbank:WP_012175103.1;Name=WP_012175103.1;Ontology_term=GO:0006631,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947847.1;locus_tag=DOLE_RS08640;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_012175103.1;transl_table=11 NC_009943.1 RefSeq gene 2014625 2014996 . + . ID=gene-DOLE_RS08645;Name=DOLE_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08645;old_locus_tag=Dole_1684 NC_009943.1 GeneMarkS-2+ CDS 2014625 2014996 . + 0 ID=cds-WP_012175104.1;Parent=gene-DOLE_RS08645;Dbxref=Genbank:WP_012175104.1;Name=WP_012175104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08645;product=hypothetical protein;protein_id=WP_012175104.1;transl_table=11 NC_009943.1 RefSeq gene 2015072 2016346 . - . ID=gene-DOLE_RS08650;Name=DOLE_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08650;old_locus_tag=Dole_1685 NC_009943.1 Protein Homology CDS 2015072 2016346 . - 0 ID=cds-WP_012175105.1;Parent=gene-DOLE_RS08650;Dbxref=Genbank:WP_012175105.1;Name=WP_012175105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017828.2;locus_tag=DOLE_RS08650;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012175105.1;transl_table=11 NC_009943.1 RefSeq gene 2016406 2017437 . - . ID=gene-DOLE_RS08655;Name=DOLE_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08655;old_locus_tag=Dole_1686 NC_009943.1 Protein Homology CDS 2016406 2017437 . - 0 ID=cds-WP_167320863.1;Parent=gene-DOLE_RS08655;Dbxref=Genbank:WP_167320863.1;Name=WP_167320863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017828.2;locus_tag=DOLE_RS08655;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_167320863.1;transl_table=11 NC_009943.1 RefSeq gene 2018081 2018626 . + . ID=gene-DOLE_RS08665;Name=DOLE_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08665;old_locus_tag=Dole_1687 NC_009943.1 GeneMarkS-2+ CDS 2018081 2018626 . + 0 ID=cds-WP_012175107.1;Parent=gene-DOLE_RS08665;Dbxref=Genbank:WP_012175107.1;Name=WP_012175107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08665;product=PDC sensor domain-containing protein;protein_id=WP_012175107.1;transl_table=11 NC_009943.1 RefSeq gene 2018722 2019543 . - . ID=gene-DOLE_RS08670;Name=DOLE_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08670;old_locus_tag=Dole_1688 NC_009943.1 Protein Homology CDS 2018722 2019543 . - 0 ID=cds-WP_012175108.1;Parent=gene-DOLE_RS08670;Dbxref=Genbank:WP_012175108.1;Name=WP_012175108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662678.1;locus_tag=DOLE_RS08670;product=nitroreductase family protein;protein_id=WP_012175108.1;transl_table=11 NC_009943.1 RefSeq gene 2019589 2021853 . - . ID=gene-DOLE_RS08675;Name=DOLE_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08675;old_locus_tag=Dole_1689 NC_009943.1 Protein Homology CDS 2019589 2021853 . - 0 ID=cds-WP_012175109.1;Parent=gene-DOLE_RS08675;Dbxref=Genbank:WP_012175109.1;Name=WP_012175109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175110.1;locus_tag=DOLE_RS08675;product=hypothetical protein;protein_id=WP_012175109.1;transl_table=11 NC_009943.1 RefSeq gene 2021876 2024137 . - . ID=gene-DOLE_RS08680;Name=DOLE_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08680;old_locus_tag=Dole_1690 NC_009943.1 Protein Homology CDS 2021876 2024137 . - 0 ID=cds-WP_012175110.1;Parent=gene-DOLE_RS08680;Dbxref=Genbank:WP_012175110.1;Name=WP_012175110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175109.1;locus_tag=DOLE_RS08680;product=hypothetical protein;protein_id=WP_012175110.1;transl_table=11 NC_009943.1 RefSeq gene 2024295 2024573 . + . ID=gene-DOLE_RS08685;Name=DOLE_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08685;old_locus_tag=Dole_1691 NC_009943.1 GeneMarkS-2+ CDS 2024295 2024573 . + 0 ID=cds-WP_012175111.1;Parent=gene-DOLE_RS08685;Dbxref=Genbank:WP_012175111.1;Name=WP_012175111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08685;product=hypothetical protein;protein_id=WP_012175111.1;transl_table=11 NC_009943.1 RefSeq gene 2024634 2025011 . + . ID=gene-DOLE_RS08690;Name=DOLE_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08690;old_locus_tag=Dole_1692 NC_009943.1 GeneMarkS-2+ CDS 2024634 2025011 . + 0 ID=cds-WP_012175112.1;Parent=gene-DOLE_RS08690;Dbxref=Genbank:WP_012175112.1;Name=WP_012175112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08690;product=hypothetical protein;protein_id=WP_012175112.1;transl_table=11 NC_009943.1 RefSeq gene 2025021 2025347 . - . ID=gene-DOLE_RS17325;Name=DOLE_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17325;old_locus_tag=Dole_1693 NC_009943.1 Protein Homology CDS 2025021 2025347 . - 0 ID=cds-WP_167320864.1;Parent=gene-DOLE_RS17325;Dbxref=Genbank:WP_167320864.1;Name=WP_167320864.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024060.2;locus_tag=DOLE_RS17325;product=DUF3783 domain-containing protein;protein_id=WP_167320864.1;transl_table=11 NC_009943.1 RefSeq gene 2025756 2027864 . + . ID=gene-DOLE_RS08700;Name=DOLE_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08700;old_locus_tag=Dole_1694 NC_009943.1 Protein Homology CDS 2025756 2027864 . + 0 ID=cds-WP_012175114.1;Parent=gene-DOLE_RS08700;Dbxref=Genbank:WP_012175114.1;Name=WP_012175114.1;Ontology_term=GO:0006096;gbkey=CDS;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071973.1;locus_tag=DOLE_RS08700;product=6-phosphofructokinase;protein_id=WP_012175114.1;transl_table=11 NC_009943.1 RefSeq gene 2027894 2028976 . + . ID=gene-DOLE_RS08705;Name=DOLE_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08705;old_locus_tag=Dole_1695 NC_009943.1 Protein Homology CDS 2027894 2028976 . + 0 ID=cds-WP_012175115.1;Parent=gene-DOLE_RS08705;Dbxref=Genbank:WP_012175115.1;Name=WP_012175115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949685.1;locus_tag=DOLE_RS08705;product=4Fe-4S binding protein;protein_id=WP_012175115.1;transl_table=11 NC_009943.1 RefSeq gene 2029076 2030218 . + . ID=gene-DOLE_RS17330;Name=DOLE_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17330;old_locus_tag=Dole_1696 NC_009943.1 Protein Homology CDS 2029076 2030218 . + 0 ID=cds-WP_012175116.1;Parent=gene-DOLE_RS17330;Dbxref=Genbank:WP_012175116.1;Name=WP_012175116.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS17330;product=sensor histidine kinase;protein_id=WP_012175116.1;transl_table=11 NC_009943.1 RefSeq gene 2030458 2030706 . + . ID=gene-DOLE_RS08715;Name=DOLE_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08715;old_locus_tag=Dole_1697 NC_009943.1 Protein Homology CDS 2030458 2030706 . + 0 ID=cds-WP_012175117.1;Parent=gene-DOLE_RS08715;Dbxref=Genbank:WP_012175117.1;Name=WP_012175117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008265574.1;locus_tag=DOLE_RS08715;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_012175117.1;transl_table=11 NC_009943.1 RefSeq gene 2030703 2031104 . + . ID=gene-DOLE_RS08720;Name=DOLE_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08720;old_locus_tag=Dole_1698 NC_009943.1 Protein Homology CDS 2030703 2031104 . + 0 ID=cds-WP_012175118.1;Parent=gene-DOLE_RS08720;Dbxref=Genbank:WP_012175118.1;Name=WP_012175118.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=DOLE_RS08720;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012175118.1;transl_table=11 NC_009943.1 RefSeq gene 2031469 2031672 . + . ID=gene-DOLE_RS08725;Name=DOLE_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08725;old_locus_tag=Dole_1699 NC_009943.1 GeneMarkS-2+ CDS 2031469 2031672 . + 0 ID=cds-WP_012175119.1;Parent=gene-DOLE_RS08725;Dbxref=Genbank:WP_012175119.1;Name=WP_012175119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08725;product=hypothetical protein;protein_id=WP_012175119.1;transl_table=11 NC_009943.1 RefSeq gene 2031644 2031910 . + . ID=gene-DOLE_RS08730;Name=DOLE_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08730;old_locus_tag=Dole_1700 NC_009943.1 Protein Homology CDS 2031644 2031910 . + 0 ID=cds-WP_012175120.1;Parent=gene-DOLE_RS08730;Dbxref=Genbank:WP_012175120.1;Name=WP_012175120.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184943.1;locus_tag=DOLE_RS08730;product=Txe/YoeB family addiction module toxin;protein_id=WP_012175120.1;transl_table=11 NC_009943.1 RefSeq gene 2032334 2032858 . - . ID=gene-DOLE_RS08735;Name=DOLE_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08735;old_locus_tag=Dole_1701 NC_009943.1 Protein Homology CDS 2032334 2032858 . - 0 ID=cds-WP_012175121.1;Parent=gene-DOLE_RS08735;Dbxref=Genbank:WP_012175121.1;Name=WP_012175121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013921.2;locus_tag=DOLE_RS08735;product=transposase;protein_id=WP_012175121.1;transl_table=11 NC_009943.1 RefSeq gene 2032953 2033636 . - . ID=gene-DOLE_RS08740;Name=DOLE_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08740;old_locus_tag=Dole_1702 NC_009943.1 Protein Homology CDS 2032953 2033636 . - 0 ID=cds-WP_041280449.1;Parent=gene-DOLE_RS08740;Dbxref=Genbank:WP_041280449.1;Name=WP_041280449.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024574.2;locus_tag=DOLE_RS08740;product=tetratricopeptide repeat protein;protein_id=WP_041280449.1;transl_table=11 NC_009943.1 RefSeq gene 2033679 2039969 . - . ID=gene-DOLE_RS08745;Name=DOLE_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08745;old_locus_tag=Dole_1703 NC_009943.1 Protein Homology CDS 2033679 2039969 . - 0 ID=cds-WP_041280450.1;Parent=gene-DOLE_RS08745;Dbxref=Genbank:WP_041280450.1;Name=WP_041280450.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015497.2;locus_tag=DOLE_RS08745;product=FG-GAP-like repeat-containing protein;protein_id=WP_041280450.1;transl_table=11 NC_009943.1 RefSeq gene 2040043 2045274 . - . ID=gene-DOLE_RS08750;Name=DOLE_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08750;old_locus_tag=Dole_1704 NC_009943.1 Protein Homology CDS 2040043 2045274 . - 0 ID=cds-WP_167320865.1;Parent=gene-DOLE_RS08750;Dbxref=Genbank:WP_167320865.1;Name=WP_167320865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024627.2;locus_tag=DOLE_RS08750;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_167320865.1;transl_table=11 NC_009943.1 RefSeq gene 2045511 2045753 . + . ID=gene-DOLE_RS18210;Name=DOLE_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18210 NC_009943.1 GeneMarkS-2+ CDS 2045511 2045753 . + 0 ID=cds-WP_153304398.1;Parent=gene-DOLE_RS18210;Dbxref=Genbank:WP_153304398.1;Name=WP_153304398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18210;product=hypothetical protein;protein_id=WP_153304398.1;transl_table=11 NC_009943.1 RefSeq gene 2045761 2045836 . - . ID=gene-DOLE_RS08760;Name=DOLE_RS08760;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS08760;old_locus_tag=Dole_R0026 NC_009943.1 tRNAscan-SE tRNA 2045761 2045836 . - . ID=rna-DOLE_RS08760;Parent=gene-DOLE_RS08760;anticodon=(pos:complement(2045801..2045803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS08760;product=tRNA-Thr NC_009943.1 tRNAscan-SE exon 2045761 2045836 . - . ID=exon-DOLE_RS08760-1;Parent=rna-DOLE_RS08760;anticodon=(pos:complement(2045801..2045803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS08760;product=tRNA-Thr NC_009943.1 RefSeq gene 2045873 2049397 . + . ID=gene-DOLE_RS08765;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=DOLE_RS08765;old_locus_tag=Dole_1705 NC_009943.1 Protein Homology CDS 2045873 2049397 . + 0 ID=cds-WP_012175125.1;Parent=gene-DOLE_RS08765;Dbxref=Genbank:WP_012175125.1;Name=WP_012175125.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:TIGR00580.1;locus_tag=DOLE_RS08765;product=transcription-repair coupling factor;protein_id=WP_012175125.1;transl_table=11 NC_009943.1 RefSeq gene 2049426 2050124 . + . ID=gene-DOLE_RS08770;Name=DOLE_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08770;old_locus_tag=Dole_1706 NC_009943.1 Protein Homology CDS 2049426 2050124 . + 0 ID=cds-WP_012175126.1;Parent=gene-DOLE_RS08770;Dbxref=Genbank:WP_012175126.1;Name=WP_012175126.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025010.2;locus_tag=DOLE_RS08770;product=SurA N-terminal domain-containing protein;protein_id=WP_012175126.1;transl_table=11 NC_009943.1 RefSeq gene 2050163 2051137 . + . ID=gene-DOLE_RS08775;Name=DOLE_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08775;old_locus_tag=Dole_1707 NC_009943.1 Protein Homology CDS 2050163 2051137 . + 0 ID=cds-WP_269719163.1;Parent=gene-DOLE_RS08775;Dbxref=Genbank:WP_269719163.1;Name=WP_269719163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025010.2;locus_tag=DOLE_RS08775;product=SurA N-terminal domain-containing protein;protein_id=WP_269719163.1;transl_table=11 NC_009943.1 RefSeq gene 2051187 2051945 . + . ID=gene-DOLE_RS08780;Name=DOLE_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08780;old_locus_tag=Dole_1708 NC_009943.1 Protein Homology CDS 2051187 2051945 . + 0 ID=cds-WP_012175128.1;Parent=gene-DOLE_RS08780;Dbxref=Genbank:WP_012175128.1;Name=WP_012175128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024855.2;locus_tag=DOLE_RS08780;product=helix-turn-helix domain-containing protein;protein_id=WP_012175128.1;transl_table=11 NC_009943.1 RefSeq gene 2052012 2052794 . + . ID=gene-DOLE_RS08785;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=DOLE_RS08785;old_locus_tag=Dole_1709 NC_009943.1 Protein Homology CDS 2052012 2052794 . + 0 ID=cds-WP_012175129.1;Parent=gene-DOLE_RS08785;Dbxref=Genbank:WP_012175129.1;Name=WP_012175129.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR00613.1;locus_tag=DOLE_RS08785;product=DNA repair protein RecO;protein_id=WP_012175129.1;transl_table=11 NC_009943.1 RefSeq gene 2052873 2053925 . + . ID=gene-DOLE_RS08790;Name=DOLE_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08790;old_locus_tag=Dole_1710 NC_009943.1 Protein Homology CDS 2052873 2053925 . + 0 ID=cds-WP_012175130.1;Parent=gene-DOLE_RS08790;Dbxref=Genbank:WP_012175130.1;Name=WP_012175130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878124.1;locus_tag=DOLE_RS08790;product=GHMP kinase;protein_id=WP_012175130.1;transl_table=11 NC_009943.1 RefSeq gene 2054085 2054975 . + . ID=gene-DOLE_RS08795;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=DOLE_RS08795;old_locus_tag=Dole_1711 NC_009943.1 Protein Homology CDS 2054085 2054975 . + 0 ID=cds-WP_041280453.1;Parent=gene-DOLE_RS08795;Dbxref=Genbank:WP_041280453.1;Name=WP_041280453.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175131.1;locus_tag=DOLE_RS08795;product=glycine--tRNA ligase subunit alpha;protein_id=WP_041280453.1;transl_table=11 NC_009943.1 RefSeq gene 2054972 2057080 . + . ID=gene-DOLE_RS08800;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=DOLE_RS08800;old_locus_tag=Dole_1712 NC_009943.1 Protein Homology CDS 2054972 2057080 . + 0 ID=cds-WP_012175132.1;Parent=gene-DOLE_RS08800;Dbxref=Genbank:WP_012175132.1;Name=WP_012175132.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878126.1;locus_tag=DOLE_RS08800;product=glycine--tRNA ligase subunit beta;protein_id=WP_012175132.1;transl_table=11 NC_009943.1 RefSeq gene 2057130 2057384 . + . ID=gene-DOLE_RS08805;Name=DOLE_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08805;old_locus_tag=Dole_1713 NC_009943.1 Protein Homology CDS 2057130 2057384 . + 0 ID=cds-WP_012175133.1;Parent=gene-DOLE_RS08805;Dbxref=Genbank:WP_012175133.1;Name=WP_012175133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965428.1;locus_tag=DOLE_RS08805;product=hypothetical protein;protein_id=WP_012175133.1;transl_table=11 NC_009943.1 RefSeq gene 2057441 2058199 . + . ID=gene-DOLE_RS08810;Name=DOLE_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08810;old_locus_tag=Dole_1714 NC_009943.1 Protein Homology CDS 2057441 2058199 . + 0 ID=cds-WP_052294282.1;Parent=gene-DOLE_RS08810;Dbxref=Genbank:WP_052294282.1;Name=WP_052294282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013232.2;locus_tag=DOLE_RS08810;product=nucleoside phosphorylase;protein_id=WP_052294282.1;transl_table=11 NC_009943.1 RefSeq gene 2058184 2060232 . + . ID=gene-DOLE_RS08815;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=DOLE_RS08815;old_locus_tag=Dole_1715 NC_009943.1 Protein Homology CDS 2058184 2060232 . + 0 ID=cds-WP_012175135.1;Parent=gene-DOLE_RS08815;Dbxref=Genbank:WP_012175135.1;Name=WP_012175135.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175135.1;locus_tag=DOLE_RS08815;product=NAD-dependent DNA ligase LigA;protein_id=WP_012175135.1;transl_table=11 NC_009943.1 RefSeq gene 2060248 2060529 . + . ID=gene-DOLE_RS08820;Name=DOLE_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08820;old_locus_tag=Dole_1716 NC_009943.1 Protein Homology CDS 2060248 2060529 . + 0 ID=cds-WP_012175136.1;Parent=gene-DOLE_RS08820;Dbxref=Genbank:WP_012175136.1;Name=WP_012175136.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012911.2;locus_tag=DOLE_RS08820;product=acylphosphatase;protein_id=WP_012175136.1;transl_table=11 NC_009943.1 RefSeq gene 2060636 2060908 . - . ID=gene-DOLE_RS08825;Name=DOLE_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08825;old_locus_tag=Dole_1717 NC_009943.1 Protein Homology CDS 2060636 2060908 . - 0 ID=cds-WP_012175137.1;Parent=gene-DOLE_RS08825;Dbxref=Genbank:WP_012175137.1;Name=WP_012175137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176271.1;locus_tag=DOLE_RS08825;product=HU family DNA-binding protein;protein_id=WP_012175137.1;transl_table=11 NC_009943.1 RefSeq gene 2061247 2062392 . - . ID=gene-DOLE_RS08830;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=DOLE_RS08830;old_locus_tag=Dole_1718 NC_009943.1 Protein Homology CDS 2061247 2062392 . - 0 ID=cds-WP_012175138.1;Parent=gene-DOLE_RS08830;Dbxref=Genbank:WP_012175138.1;Name=WP_012175138.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071968.1;locus_tag=DOLE_RS08830;product=signal recognition particle-docking protein FtsY;protein_id=WP_012175138.1;transl_table=11 NC_009943.1 RefSeq gene 2062433 2066047 . - . ID=gene-DOLE_RS08835;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=DOLE_RS08835;old_locus_tag=Dole_1719 NC_009943.1 Protein Homology CDS 2062433 2066047 . - 0 ID=cds-WP_012175139.1;Parent=gene-DOLE_RS08835;Dbxref=Genbank:WP_012175139.1;Name=WP_012175139.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: protein motif:HMM:TIGR02168.1;locus_tag=DOLE_RS08835;product=chromosome segregation protein SMC;protein_id=WP_012175139.1;transl_table=11 NC_009943.1 RefSeq gene 2066736 2067503 . + . ID=gene-DOLE_RS08840;Name=DOLE_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08840;old_locus_tag=Dole_1720 NC_009943.1 Protein Homology CDS 2066736 2067503 . + 0 ID=cds-WP_012175140.1;Parent=gene-DOLE_RS08840;Dbxref=Genbank:WP_012175140.1;Name=WP_012175140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175141.1;locus_tag=DOLE_RS08840;product=glycosyltransferase;protein_id=WP_012175140.1;transl_table=11 NC_009943.1 RefSeq gene 2067503 2068288 . + . ID=gene-DOLE_RS08845;Name=DOLE_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08845;old_locus_tag=Dole_1721 NC_009943.1 Protein Homology CDS 2067503 2068288 . + 0 ID=cds-WP_012175141.1;Parent=gene-DOLE_RS08845;Dbxref=Genbank:WP_012175141.1;Name=WP_012175141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175140.1;locus_tag=DOLE_RS08845;product=glycosyltransferase;protein_id=WP_012175141.1;transl_table=11 NC_009943.1 RefSeq gene 2068304 2069356 . - . ID=gene-DOLE_RS08850;Name=DOLE_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08850;old_locus_tag=Dole_1722 NC_009943.1 GeneMarkS-2+ CDS 2068304 2069356 . - 0 ID=cds-WP_012175142.1;Parent=gene-DOLE_RS08850;Dbxref=Genbank:WP_012175142.1;Name=WP_012175142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08850;product=radical SAM protein;protein_id=WP_012175142.1;transl_table=11 NC_009943.1 RefSeq gene 2069384 2069650 . - . ID=gene-DOLE_RS08855;Name=DOLE_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08855;old_locus_tag=Dole_1723 NC_009943.1 GeneMarkS-2+ CDS 2069384 2069650 . - 0 ID=cds-WP_041280455.1;Parent=gene-DOLE_RS08855;Dbxref=Genbank:WP_041280455.1;Name=WP_041280455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08855;product=hypothetical protein;protein_id=WP_041280455.1;transl_table=11 NC_009943.1 RefSeq gene 2069832 2070539 . + . ID=gene-DOLE_RS08860;Name=DOLE_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08860;old_locus_tag=Dole_1724 NC_009943.1 Protein Homology CDS 2069832 2070539 . + 0 ID=cds-WP_012175144.1;Parent=gene-DOLE_RS08860;Dbxref=Genbank:WP_012175144.1;Name=WP_012175144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609282.1;locus_tag=DOLE_RS08860;product=Bax inhibitor-1/YccA family protein;protein_id=WP_012175144.1;transl_table=11 NC_009943.1 RefSeq gene 2070605 2071027 . - . ID=gene-DOLE_RS08865;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=DOLE_RS08865;old_locus_tag=Dole_1725 NC_009943.1 Protein Homology CDS 2070605 2071027 . - 0 ID=cds-WP_012175145.1;Parent=gene-DOLE_RS08865;Dbxref=Genbank:WP_012175145.1;Name=WP_012175145.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949417.1;locus_tag=DOLE_RS08865;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_012175145.1;transl_table=11 NC_009943.1 RefSeq gene 2071062 2072858 . - . ID=gene-DOLE_RS08870;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=DOLE_RS08870;old_locus_tag=Dole_1726 NC_009943.1 Protein Homology CDS 2071062 2072858 . - 0 ID=cds-WP_012175146.1;Parent=gene-DOLE_RS08870;Dbxref=Genbank:WP_012175146.1;Name=WP_012175146.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175146.1;locus_tag=DOLE_RS08870;product=translation elongation factor 4;protein_id=WP_012175146.1;transl_table=11 NC_009943.1 RefSeq gene 2072973 2073947 . - . ID=gene-DOLE_RS08875;Name=DOLE_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08875;old_locus_tag=Dole_1727 NC_009943.1 Protein Homology CDS 2072973 2073947 . - 0 ID=cds-WP_012175147.1;Parent=gene-DOLE_RS08875;Dbxref=Genbank:WP_012175147.1;Name=WP_012175147.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878351.1;locus_tag=DOLE_RS08875;product=rhomboid family intramembrane serine protease;protein_id=WP_012175147.1;transl_table=11 NC_009943.1 RefSeq gene 2073982 2074818 . - . ID=gene-DOLE_RS08880;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=DOLE_RS08880;old_locus_tag=Dole_1728 NC_009943.1 Protein Homology CDS 2073982 2074818 . - 0 ID=cds-WP_012175148.1;Parent=gene-DOLE_RS08880;Dbxref=Genbank:WP_012175148.1;Name=WP_012175148.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586327.1;locus_tag=DOLE_RS08880;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_012175148.1;transl_table=11 NC_009943.1 RefSeq gene 2074946 2077600 . - . ID=gene-DOLE_RS08885;Name=DOLE_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08885;old_locus_tag=Dole_1729 NC_009943.1 Protein Homology CDS 2074946 2077600 . - 0 ID=cds-WP_012175149.1;Parent=gene-DOLE_RS08885;Dbxref=Genbank:WP_012175149.1;Name=WP_012175149.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878353.1;locus_tag=DOLE_RS08885;product=valine--tRNA ligase;protein_id=WP_012175149.1;transl_table=11 NC_009943.1 RefSeq gene 2077905 2079890 . - . ID=gene-DOLE_RS17335;Name=DOLE_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17335;old_locus_tag=Dole_1731 NC_009943.1 GeneMarkS-2+ CDS 2077905 2079890 . - 0 ID=cds-WP_012175151.1;Parent=gene-DOLE_RS17335;Dbxref=Genbank:WP_012175151.1;Name=WP_012175151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17335;product=hypothetical protein;protein_id=WP_012175151.1;transl_table=11 NC_009943.1 RefSeq gene 2080097 2080834 . + . ID=gene-DOLE_RS08895;Name=DOLE_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08895;old_locus_tag=Dole_1732 NC_009943.1 Protein Homology CDS 2080097 2080834 . + 0 ID=cds-WP_012175152.1;Parent=gene-DOLE_RS08895;Dbxref=Genbank:WP_012175152.1;Name=WP_012175152.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: protein motif:HMM:NF008692.0;locus_tag=DOLE_RS08895;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_012175152.1;transl_table=11 NC_009943.1 cmsearch riboswitch 2080979 2081056 . + . ID=id-NC_009943.1:2080979..2081056;Dbxref=RFAM:RF01051;Note=cyclic di-GMP riboswitch class I;bound_moiety=cyclic di-GMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NC_009943.1 RefSeq gene 2081143 2083383 . + . ID=gene-DOLE_RS08900;Name=DOLE_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08900;old_locus_tag=Dole_1733 NC_009943.1 Protein Homology CDS 2081143 2083383 . + 0 ID=cds-WP_012175153.1;Parent=gene-DOLE_RS08900;Dbxref=Genbank:WP_012175153.1;Name=WP_012175153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019237.2;locus_tag=DOLE_RS08900;product=DUF1566 domain-containing protein;protein_id=WP_012175153.1;transl_table=11 NC_009943.1 RefSeq gene 2083463 2083538 . + . ID=gene-DOLE_RS08905;Name=DOLE_RS08905;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS08905;old_locus_tag=Dole_R0027 NC_009943.1 tRNAscan-SE tRNA 2083463 2083538 . + . ID=rna-DOLE_RS08905;Parent=gene-DOLE_RS08905;anticodon=(pos:2083496..2083498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS08905;product=tRNA-Phe NC_009943.1 tRNAscan-SE exon 2083463 2083538 . + . ID=exon-DOLE_RS08905-1;Parent=rna-DOLE_RS08905;anticodon=(pos:2083496..2083498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS08905;product=tRNA-Phe NC_009943.1 RefSeq gene 2083588 2085084 . - . ID=gene-DOLE_RS08910;Name=DOLE_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08910;old_locus_tag=Dole_1734 NC_009943.1 Protein Homology CDS 2083588 2085084 . - 0 ID=cds-WP_012175154.1;Parent=gene-DOLE_RS08910;Dbxref=Genbank:WP_012175154.1;Name=WP_012175154.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: protein motif:HMM:NF001989.1;locus_tag=DOLE_RS08910;product=cobyric acid synthase;protein_id=WP_012175154.1;transl_table=11 NC_009943.1 RefSeq gene 2085081 2085767 . - . ID=gene-DOLE_RS08915;Name=DOLE_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08915;old_locus_tag=Dole_1735 NC_009943.1 Protein Homology CDS 2085081 2085767 . - 0 ID=cds-WP_012175155.1;Parent=gene-DOLE_RS08915;Dbxref=Genbank:WP_012175155.1;Name=WP_012175155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=DOLE_RS08915;product=energy transducer TonB;protein_id=WP_012175155.1;transl_table=11 NC_009943.1 RefSeq gene 2085784 2086203 . - . ID=gene-DOLE_RS08920;Name=DOLE_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08920;old_locus_tag=Dole_1736 NC_009943.1 Protein Homology CDS 2085784 2086203 . - 0 ID=cds-WP_012175156.1;Parent=gene-DOLE_RS08920;Dbxref=Genbank:WP_012175156.1;Name=WP_012175156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072651.1;locus_tag=DOLE_RS08920;product=biopolymer transporter ExbD;protein_id=WP_012175156.1;transl_table=11 NC_009943.1 RefSeq gene 2086219 2086818 . - . ID=gene-DOLE_RS08925;Name=DOLE_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08925;old_locus_tag=Dole_1737 NC_009943.1 Protein Homology CDS 2086219 2086818 . - 0 ID=cds-WP_153304508.1;Parent=gene-DOLE_RS08925;Dbxref=Genbank:WP_153304508.1;Name=WP_153304508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958773.1;locus_tag=DOLE_RS08925;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_153304508.1;transl_table=11 NC_009943.1 RefSeq gene 2086821 2088551 . - . ID=gene-DOLE_RS17340;Name=DOLE_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17340;old_locus_tag=Dole_1738 NC_009943.1 Protein Homology CDS 2086821 2088551 . - 0 ID=cds-WP_012175158.1;Parent=gene-DOLE_RS17340;Dbxref=Genbank:WP_012175158.1;Name=WP_012175158.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023358.2;locus_tag=DOLE_RS17340;product=DUF3450 family protein;protein_id=WP_012175158.1;transl_table=11 NC_009943.1 cmsearch riboswitch 2088664 2088850 . - . ID=id-NC_009943.1:2088664..2088850;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NC_009943.1 RefSeq gene 2088972 2090006 . + . ID=gene-DOLE_RS08935;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=DOLE_RS08935;old_locus_tag=Dole_1739 NC_009943.1 Protein Homology CDS 2088972 2090006 . + 0 ID=cds-WP_153304399.1;Parent=gene-DOLE_RS08935;Dbxref=Genbank:WP_153304399.1;Name=WP_153304399.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: protein motif:HMM:TIGR00706.1;locus_tag=DOLE_RS08935;product=signal peptide peptidase SppA;protein_id=WP_153304399.1;transl_table=11 NC_009943.1 RefSeq gene 2090020 2090865 . - . ID=gene-DOLE_RS08940;Name=DOLE_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08940;old_locus_tag=Dole_1740 NC_009943.1 Protein Homology CDS 2090020 2090865 . - 0 ID=cds-WP_012175160.1;Parent=gene-DOLE_RS08940;Dbxref=Genbank:WP_012175160.1;Name=WP_012175160.1;Note=N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038196.1;locus_tag=DOLE_RS08940;product=EFR1 family ferrodoxin;protein_id=WP_012175160.1;transl_table=11 NC_009943.1 RefSeq gene 2090964 2092088 . - . ID=gene-DOLE_RS08945;Name=DOLE_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08945;old_locus_tag=Dole_1741 NC_009943.1 Protein Homology CDS 2090964 2092088 . - 0 ID=cds-WP_012175161.1;Parent=gene-DOLE_RS08945;Dbxref=Genbank:WP_012175161.1;Name=WP_012175161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS08945;product=sensor domain-containing diguanylate cyclase;protein_id=WP_012175161.1;transl_table=11 NC_009943.1 RefSeq gene 2092188 2093753 . - . ID=gene-DOLE_RS08950;Name=DOLE_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08950;old_locus_tag=Dole_1742 NC_009943.1 Protein Homology CDS 2092188 2093753 . - 0 ID=cds-WP_012175162.1;Parent=gene-DOLE_RS08950;Dbxref=Genbank:WP_012175162.1;Name=WP_012175162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175850.1;locus_tag=DOLE_RS08950;product=radical SAM protein;protein_id=WP_012175162.1;transl_table=11 NC_009943.1 RefSeq gene 2093964 2094380 . + . ID=gene-DOLE_RS18435;Name=DOLE_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18435 NC_009943.1 Protein Homology CDS 2093964 2094380 . + 0 ID=cds-WP_041280456.1;Parent=gene-DOLE_RS18435;Dbxref=Genbank:WP_041280456.1;Name=WP_041280456.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS18435;product=PilZ domain-containing protein;protein_id=WP_041280456.1;transl_table=11 NC_009943.1 RefSeq gene 2094391 2095035 . - . ID=gene-DOLE_RS08960;Name=DOLE_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08960;old_locus_tag=Dole_1743 NC_009943.1 Protein Homology CDS 2094391 2095035 . - 0 ID=cds-WP_012175163.1;Parent=gene-DOLE_RS08960;Dbxref=Genbank:WP_012175163.1;Name=WP_012175163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024258.2;locus_tag=DOLE_RS08960;product=metallophosphoesterase family protein;protein_id=WP_012175163.1;transl_table=11 NC_009943.1 RefSeq gene 2095103 2095474 . - . ID=gene-DOLE_RS08965;Name=DOLE_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08965;old_locus_tag=Dole_1744 NC_009943.1 GeneMarkS-2+ CDS 2095103 2095474 . - 0 ID=cds-WP_012175164.1;Parent=gene-DOLE_RS08965;Dbxref=Genbank:WP_012175164.1;Name=WP_012175164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS08965;product=hypothetical protein;protein_id=WP_012175164.1;transl_table=11 NC_009943.1 RefSeq gene 2095532 2096323 . - . ID=gene-DOLE_RS08970;Name=DOLE_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08970;old_locus_tag=Dole_1745 NC_009943.1 Protein Homology CDS 2095532 2096323 . - 0 ID=cds-WP_012175165.1;Parent=gene-DOLE_RS08970;Dbxref=Genbank:WP_012175165.1;Name=WP_012175165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948878.1;locus_tag=DOLE_RS08970;product=thymidylate synthase;protein_id=WP_012175165.1;transl_table=11 NC_009943.1 RefSeq gene 2096538 2097998 . + . ID=gene-DOLE_RS08975;Name=DOLE_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08975;old_locus_tag=Dole_1746 NC_009943.1 Protein Homology CDS 2096538 2097998 . + 0 ID=cds-WP_041280457.1;Parent=gene-DOLE_RS08975;Dbxref=Genbank:WP_041280457.1;Name=WP_041280457.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012376.2;locus_tag=DOLE_RS08975;product=metallophosphoesterase;protein_id=WP_041280457.1;transl_table=11 NC_009943.1 RefSeq gene 2098060 2098815 . + . ID=gene-DOLE_RS18675;Name=DOLE_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18675;old_locus_tag=Dole_1747 NC_009943.1 Protein Homology CDS 2098060 2098815 . + 0 ID=cds-WP_012175167.1;Parent=gene-DOLE_RS18675;Dbxref=Genbank:WP_012175167.1;Name=WP_012175167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964835.1;locus_tag=DOLE_RS18675;product=TerB family tellurite resistance protein;protein_id=WP_012175167.1;transl_table=11 NC_009943.1 RefSeq gene 2098812 2099627 . - . ID=gene-DOLE_RS08985;Name=DOLE_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS08985;old_locus_tag=Dole_1748 NC_009943.1 Protein Homology CDS 2098812 2099627 . - 0 ID=cds-WP_012175168.1;Parent=gene-DOLE_RS08985;Dbxref=Genbank:WP_012175168.1;Name=WP_012175168.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS08985;product=MBL fold metallo-hydrolase;protein_id=WP_012175168.1;transl_table=11 NC_009943.1 RefSeq gene 2099624 2100979 . - . ID=gene-DOLE_RS08990;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=DOLE_RS08990;old_locus_tag=Dole_1749 NC_009943.1 Protein Homology CDS 2099624 2100979 . - 0 ID=cds-WP_012175169.1;Parent=gene-DOLE_RS08990;Dbxref=Genbank:WP_012175169.1;Name=WP_012175169.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR00089.1;locus_tag=DOLE_RS08990;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_012175169.1;transl_table=11 NC_009943.1 RefSeq gene 2101153 2102220 . - . ID=gene-DOLE_RS08995;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=DOLE_RS08995;old_locus_tag=Dole_1750 NC_009943.1 Protein Homology CDS 2101153 2102220 . - 0 ID=cds-WP_167320867.1;Parent=gene-DOLE_RS08995;Dbxref=Genbank:WP_167320867.1;Name=WP_167320867.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: protein motif:HMM:TIGR00420.1;locus_tag=DOLE_RS08995;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_167320867.1;transl_table=11 NC_009943.1 RefSeq gene 2102649 2104868 . - . ID=gene-DOLE_RS17345;Name=DOLE_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17345;old_locus_tag=Dole_1751 NC_009943.1 Protein Homology CDS 2102649 2104868 . - 0 ID=cds-WP_012175171.1;Parent=gene-DOLE_RS17345;Dbxref=Genbank:WP_012175171.1;Name=WP_012175171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019874.2;locus_tag=DOLE_RS17345;product=methyl-accepting chemotaxis protein;protein_id=WP_012175171.1;transl_table=11 NC_009943.1 RefSeq gene 2105028 2105933 . + . ID=gene-DOLE_RS09010;Name=DOLE_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09010;old_locus_tag=Dole_1752 NC_009943.1 Protein Homology CDS 2105028 2105933 . + 0 ID=cds-WP_012175172.1;Parent=gene-DOLE_RS09010;Dbxref=Genbank:WP_012175172.1;Name=WP_012175172.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS09010;product=diguanylate cyclase;protein_id=WP_012175172.1;transl_table=11 NC_009943.1 RefSeq gene 2106130 2108436 . + . ID=gene-DOLE_RS09015;Name=DOLE_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09015;old_locus_tag=Dole_1753 NC_009943.1 Protein Homology CDS 2106130 2108436 . + 0 ID=cds-WP_012175173.1;Parent=gene-DOLE_RS09015;Dbxref=Genbank:WP_012175173.1;Name=WP_012175173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175357.1;locus_tag=DOLE_RS09015;product=VCBS repeat-containing protein;protein_id=WP_012175173.1;transl_table=11 NC_009943.1 RefSeq gene 2108481 2110811 . + . ID=gene-DOLE_RS09020;Name=DOLE_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09020;old_locus_tag=Dole_1754 NC_009943.1 Protein Homology CDS 2108481 2110811 . + 0 ID=cds-WP_012175174.1;Parent=gene-DOLE_RS09020;Dbxref=Genbank:WP_012175174.1;Name=WP_012175174.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024907.2;locus_tag=DOLE_RS09020;product=VCBS repeat-containing protein;protein_id=WP_012175174.1;transl_table=11 NC_009943.1 RefSeq gene 2111080 2113161 . + . ID=gene-DOLE_RS18440;Name=DOLE_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18440;old_locus_tag=Dole_1755 NC_009943.1 Protein Homology CDS 2111080 2113161 . + 0 ID=cds-WP_012175175.1;Parent=gene-DOLE_RS18440;Dbxref=Genbank:WP_012175175.1;Name=WP_012175175.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: protein motif:HMM:TIGR03032.1;locus_tag=DOLE_RS18440;product=TIGR03032 family protein;protein_id=WP_012175175.1;transl_table=11 NC_009943.1 RefSeq gene 2113603 2115729 . + . ID=gene-DOLE_RS09030;Name=DOLE_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09030;old_locus_tag=Dole_1756 NC_009943.1 Protein Homology CDS 2113603 2115729 . + 0 ID=cds-WP_012175176.1;Parent=gene-DOLE_RS09030;Dbxref=Genbank:WP_012175176.1;Name=WP_012175176.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024907.2;locus_tag=DOLE_RS09030;product=VCBS repeat-containing protein;protein_id=WP_012175176.1;transl_table=11 NC_009943.1 RefSeq gene 2115767 2117959 . + . ID=gene-DOLE_RS09035;Name=DOLE_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09035;old_locus_tag=Dole_1757 NC_009943.1 Protein Homology CDS 2115767 2117959 . + 0 ID=cds-WP_012175177.1;Parent=gene-DOLE_RS09035;Dbxref=Genbank:WP_012175177.1;Name=WP_012175177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024907.2;locus_tag=DOLE_RS09035;product=VCBS repeat-containing protein;protein_id=WP_012175177.1;transl_table=11 NC_009943.1 RefSeq gene 2118065 2118964 . + . ID=gene-DOLE_RS09040;Name=DOLE_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09040;old_locus_tag=Dole_1758 NC_009943.1 Protein Homology CDS 2118065 2118964 . + 0 ID=cds-WP_012175178.1;Parent=gene-DOLE_RS09040;Dbxref=Genbank:WP_012175178.1;Name=WP_012175178.1;Ontology_term=GO:0017013;gbkey=CDS;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: protein motif:HMM:NF014477.2;locus_tag=DOLE_RS09040;product=FAD:protein FMN transferase;protein_id=WP_012175178.1;transl_table=11 NC_009943.1 RefSeq gene 2119260 2119478 . - . ID=gene-DOLE_RS09045;Name=DOLE_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09045;old_locus_tag=Dole_1759 NC_009943.1 Protein Homology CDS 2119260 2119478 . - 0 ID=cds-WP_012175179.1;Parent=gene-DOLE_RS09045;Dbxref=Genbank:WP_012175179.1;Name=WP_012175179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875550.1;locus_tag=DOLE_RS09045;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_012175179.1;transl_table=11 NC_009943.1 RefSeq gene 2119480 2119872 . - . ID=gene-DOLE_RS09050;Name=DOLE_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09050;old_locus_tag=Dole_1760 NC_009943.1 Protein Homology CDS 2119480 2119872 . - 0 ID=cds-WP_012175180.1;Parent=gene-DOLE_RS09050;Dbxref=Genbank:WP_012175180.1;Name=WP_012175180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=DOLE_RS09050;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012175180.1;transl_table=11 NC_009943.1 RefSeq gene 2120219 2122069 . + . ID=gene-DOLE_RS09055;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=DOLE_RS09055;old_locus_tag=Dole_1761 NC_009943.1 Protein Homology CDS 2120219 2122069 . + 0 ID=cds-WP_041280462.1;Parent=gene-DOLE_RS09055;Dbxref=Genbank:WP_041280462.1;Name=WP_041280462.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014955852.1;locus_tag=DOLE_RS09055;product=translational GTPase TypA;protein_id=WP_041280462.1;transl_table=11 NC_009943.1 RefSeq gene 2122049 2123365 . - . ID=gene-DOLE_RS09060;Name=DOLE_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09060;old_locus_tag=Dole_1762 NC_009943.1 Protein Homology CDS 2122049 2123365 . - 0 ID=cds-WP_012175182.1;Parent=gene-DOLE_RS09060;Dbxref=Genbank:WP_012175182.1;Name=WP_012175182.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016311.2;locus_tag=DOLE_RS09060;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_012175182.1;transl_table=11 NC_009943.1 RefSeq gene 2123370 2125403 . - . ID=gene-DOLE_RS09065;Name=DOLE_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09065;old_locus_tag=Dole_1763 NC_009943.1 Protein Homology CDS 2123370 2125403 . - 0 ID=cds-WP_012175183.1;Parent=gene-DOLE_RS09065;Dbxref=Genbank:WP_012175183.1;Name=WP_012175183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024850.2;locus_tag=DOLE_RS09065;product=ABC transporter substrate-binding protein;protein_id=WP_012175183.1;transl_table=11 NC_009943.1 RefSeq gene 2125422 2126366 . - . ID=gene-DOLE_RS09070;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=DOLE_RS09070;old_locus_tag=Dole_1764 NC_009943.1 Protein Homology CDS 2125422 2126366 . - 0 ID=cds-WP_012175184.1;Parent=gene-DOLE_RS09070;Dbxref=Genbank:WP_012175184.1;Name=WP_012175184.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175184.1;locus_tag=DOLE_RS09070;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_012175184.1;transl_table=11 NC_009943.1 RefSeq gene 2126385 2128004 . - . ID=gene-DOLE_RS17350;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=DOLE_RS17350;old_locus_tag=Dole_1765 NC_009943.1 Protein Homology CDS 2126385 2128004 . - 0 ID=cds-WP_012175185.1;Parent=gene-DOLE_RS17350;Dbxref=Genbank:WP_012175185.1;Name=WP_012175185.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: protein motif:HMM:TIGR01379.1;locus_tag=DOLE_RS17350;product=thiamine-phosphate kinase;protein_id=WP_012175185.1;transl_table=11 NC_009943.1 RefSeq gene 2128082 2128663 . - . ID=gene-DOLE_RS09080;Name=DOLE_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09080;old_locus_tag=Dole_1766 NC_009943.1 Protein Homology CDS 2128082 2128663 . - 0 ID=cds-WP_012175186.1;Parent=gene-DOLE_RS09080;Dbxref=Genbank:WP_012175186.1;Name=WP_012175186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070451.1;locus_tag=DOLE_RS09080;product=HDIG domain-containing protein;protein_id=WP_012175186.1;transl_table=11 NC_009943.1 RefSeq gene 2128721 2129828 . - . ID=gene-DOLE_RS09085;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=DOLE_RS09085;old_locus_tag=Dole_1767 NC_009943.1 Protein Homology CDS 2129748 2129828 . - 0 ID=cds-WP_232362693.1;Parent=gene-DOLE_RS09085;Dbxref=Genbank:WP_232362693.1;Name=WP_232362693.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_136360590.1;locus_tag=DOLE_RS09085;product=peptide chain release factor 2;protein_id=WP_232362693.1;transl_table=11 NC_009943.1 Protein Homology CDS 2128721 2129746 . - 0 ID=cds-WP_232362693.1;Parent=gene-DOLE_RS09085;Dbxref=Genbank:WP_232362693.1;Name=WP_232362693.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_136360590.1;locus_tag=DOLE_RS09085;product=peptide chain release factor 2;protein_id=WP_232362693.1;transl_table=11 NC_009943.1 RefSeq gene 2129873 2131501 . - . ID=gene-DOLE_RS09090;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=DOLE_RS09090;old_locus_tag=Dole_1768 NC_009943.1 Protein Homology CDS 2129873 2131501 . - 0 ID=cds-WP_012175188.1;Parent=gene-DOLE_RS09090;Dbxref=Genbank:WP_012175188.1;Name=WP_012175188.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: protein motif:HMM:TIGR00546.1;locus_tag=DOLE_RS09090;product=apolipoprotein N-acyltransferase;protein_id=WP_012175188.1;transl_table=11 NC_009943.1 RefSeq gene 2131498 2132391 . - . ID=gene-DOLE_RS17355;Name=DOLE_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17355;old_locus_tag=Dole_1769 NC_009943.1 Protein Homology CDS 2131498 2132391 . - 0 ID=cds-WP_269719164.1;Parent=gene-DOLE_RS17355;Dbxref=Genbank:WP_269719164.1;Name=WP_269719164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021252.2;locus_tag=DOLE_RS17355;product=C-GCAxxG-C-C family protein;protein_id=WP_269719164.1;transl_table=11 NC_009943.1 RefSeq gene 2132668 2133639 . - . ID=gene-DOLE_RS09100;Name=DOLE_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09100;old_locus_tag=Dole_1770 NC_009943.1 Protein Homology CDS 2132668 2133639 . - 0 ID=cds-WP_012175190.1;Parent=gene-DOLE_RS09100;Dbxref=Genbank:WP_012175190.1;Name=WP_012175190.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024109.2;locus_tag=DOLE_RS09100;product=alpha/beta hydrolase;protein_id=WP_012175190.1;transl_table=11 NC_009943.1 RefSeq gene 2133707 2135572 . - . ID=gene-DOLE_RS09105;Name=DOLE_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09105;old_locus_tag=Dole_1771 NC_009943.1 Protein Homology CDS 2133707 2135572 . - 0 ID=cds-WP_012175191.1;Parent=gene-DOLE_RS09105;Dbxref=Genbank:WP_012175191.1;Name=WP_012175191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175705.1;locus_tag=DOLE_RS09105;product=aldehyde ferredoxin oxidoreductase family protein;protein_id=WP_012175191.1;transl_table=11 NC_009943.1 RefSeq gene 2135655 2136263 . - . ID=gene-DOLE_RS09110;Name=DOLE_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09110;old_locus_tag=Dole_1772 NC_009943.1 Protein Homology CDS 2135655 2136263 . - 0 ID=cds-WP_012175192.1;Parent=gene-DOLE_RS09110;Dbxref=Genbank:WP_012175192.1;Name=WP_012175192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS09110;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175192.1;transl_table=11 NC_009943.1 RefSeq gene 2136574 2137530 . - . ID=gene-DOLE_RS09115;Name=DOLE_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09115;old_locus_tag=Dole_1773 NC_009943.1 Protein Homology CDS 2136574 2137530 . - 0 ID=cds-WP_012175193.1;Parent=gene-DOLE_RS09115;Dbxref=Genbank:WP_012175193.1;Name=WP_012175193.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS09115;product=tetratricopeptide repeat protein;protein_id=WP_012175193.1;transl_table=11 NC_009943.1 RefSeq gene 2137536 2139983 . - . ID=gene-DOLE_RS09120;Name=DOLE_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09120;old_locus_tag=Dole_1774 NC_009943.1 Protein Homology CDS 2137536 2139983 . - 0 ID=cds-WP_012175194.1;Parent=gene-DOLE_RS09120;Dbxref=Genbank:WP_012175194.1;Name=WP_012175194.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949196.1;locus_tag=DOLE_RS09120;product=MMPL family transporter;protein_id=WP_012175194.1;transl_table=11 NC_009943.1 RefSeq gene 2140318 2140515 . + . ID=gene-DOLE_RS09125;Name=DOLE_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09125;old_locus_tag=Dole_1775 NC_009943.1 Protein Homology CDS 2140318 2140515 . + 0 ID=cds-WP_041281012.1;Parent=gene-DOLE_RS09125;Dbxref=Genbank:WP_041281012.1;Name=WP_041281012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02605.1;locus_tag=DOLE_RS09125;product=zinc ribbon domain-containing protein;protein_id=WP_041281012.1;transl_table=11 NC_009943.1 RefSeq gene 2140694 2142253 . + . ID=gene-DOLE_RS09130;Name=DOLE_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09130;old_locus_tag=Dole_1776 NC_009943.1 Protein Homology CDS 2140694 2142253 . + 0 ID=cds-WP_012175196.1;Parent=gene-DOLE_RS09130;Dbxref=Genbank:WP_012175196.1;Name=WP_012175196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS09130;product=sensor histidine kinase;protein_id=WP_012175196.1;transl_table=11 NC_009943.1 RefSeq gene 2142240 2143637 . + . ID=gene-DOLE_RS09135;Name=DOLE_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09135;old_locus_tag=Dole_1777 NC_009943.1 Protein Homology CDS 2142240 2143637 . + 0 ID=cds-WP_012175197.1;Parent=gene-DOLE_RS09135;Dbxref=Genbank:WP_012175197.1;Name=WP_012175197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724766.1;locus_tag=DOLE_RS09135;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012175197.1;transl_table=11 NC_009943.1 RefSeq gene 2143671 2144855 . + . ID=gene-DOLE_RS09140;Name=DOLE_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09140;old_locus_tag=Dole_1778 NC_009943.1 Protein Homology CDS 2143671 2144855 . + 0 ID=cds-WP_041281013.1;Parent=gene-DOLE_RS09140;Dbxref=Genbank:WP_041281013.1;Name=WP_041281013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949652.1;locus_tag=DOLE_RS09140;product=thiolase family protein;protein_id=WP_041281013.1;transl_table=11 NC_009943.1 RefSeq gene 2144957 2145033 . - . ID=gene-DOLE_RS09145;Name=DOLE_RS09145;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS09145;old_locus_tag=Dole_R0028 NC_009943.1 tRNAscan-SE tRNA 2144957 2145033 . - . ID=rna-DOLE_RS09145;Parent=gene-DOLE_RS09145;anticodon=(pos:complement(2144997..2144999));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS09145;product=tRNA-Val NC_009943.1 tRNAscan-SE exon 2144957 2145033 . - . ID=exon-DOLE_RS09145-1;Parent=rna-DOLE_RS09145;anticodon=(pos:complement(2144997..2144999));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS09145;product=tRNA-Val NC_009943.1 RefSeq gene 2145153 2145938 . + . ID=gene-DOLE_RS09150;Name=DOLE_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09150;old_locus_tag=Dole_1779 NC_009943.1 Protein Homology CDS 2145153 2145938 . + 0 ID=cds-WP_012175199.1;Parent=gene-DOLE_RS09150;Dbxref=Genbank:WP_012175199.1;Name=WP_012175199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015338.2;locus_tag=DOLE_RS09150;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_012175199.1;transl_table=11 NC_009943.1 RefSeq gene 2146260 2146907 . + . ID=gene-DOLE_RS09155;Name=DOLE_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09155;old_locus_tag=Dole_1780 NC_009943.1 GeneMarkS-2+ CDS 2146260 2146907 . + 0 ID=cds-WP_041280465.1;Parent=gene-DOLE_RS09155;Dbxref=Genbank:WP_041280465.1;Name=WP_041280465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09155;product=hypothetical protein;protein_id=WP_041280465.1;transl_table=11 NC_009943.1 RefSeq gene 2146904 2147614 . + . ID=gene-DOLE_RS09160;Name=DOLE_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09160;old_locus_tag=Dole_1781 NC_009943.1 Protein Homology CDS 2146904 2147614 . + 0 ID=cds-WP_232362694.1;Parent=gene-DOLE_RS09160;Dbxref=Genbank:WP_232362694.1;Name=WP_232362694.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014955822.1;locus_tag=DOLE_RS09160;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_232362694.1;transl_table=11 NC_009943.1 RefSeq gene 2148031 2148267 . + . ID=gene-DOLE_RS09165;Name=DOLE_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09165;old_locus_tag=Dole_1782 NC_009943.1 Protein Homology CDS 2148031 2148267 . + 0 ID=cds-WP_012175202.1;Parent=gene-DOLE_RS09165;Dbxref=Genbank:WP_012175202.1;Name=WP_012175202.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: protein motif:HMM:NF014643.2;locus_tag=DOLE_RS09165;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_012175202.1;transl_table=11 NC_009943.1 RefSeq gene 2148267 2148701 . + . ID=gene-DOLE_RS09170;Name=DOLE_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09170;old_locus_tag=Dole_1783 NC_009943.1 Protein Homology CDS 2148267 2148701 . + 0 ID=cds-WP_012175203.1;Parent=gene-DOLE_RS09170;Dbxref=Genbank:WP_012175203.1;Name=WP_012175203.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=DOLE_RS09170;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012175203.1;transl_table=11 NC_009943.1 RefSeq gene 2149005 2149598 . - . ID=gene-DOLE_RS17950;Name=DOLE_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17950;old_locus_tag=Dole_1784 NC_009943.1 GeneMarkS-2+ CDS 2149005 2149598 . - 0 ID=cds-WP_012175204.1;Parent=gene-DOLE_RS17950;Dbxref=Genbank:WP_012175204.1;Name=WP_012175204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17950;product=hypothetical protein;protein_id=WP_012175204.1;transl_table=11 NC_009943.1 RefSeq gene 2150224 2151747 . - . ID=gene-DOLE_RS09175;Name=DOLE_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09175;old_locus_tag=Dole_1785 NC_009943.1 Protein Homology CDS 2150224 2151747 . - 0 ID=cds-WP_012175205.1;Parent=gene-DOLE_RS09175;Dbxref=Genbank:WP_012175205.1;Name=WP_012175205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070412.1;locus_tag=DOLE_RS09175;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_012175205.1;transl_table=11 NC_009943.1 RefSeq gene 2153402 2153887 . + . ID=gene-DOLE_RS09180;Name=DOLE_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09180;old_locus_tag=Dole_1786 NC_009943.1 Protein Homology CDS 2153402 2153887 . + 0 ID=cds-WP_012175206.1;Parent=gene-DOLE_RS09180;Dbxref=Genbank:WP_012175206.1;Name=WP_012175206.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013777.2;locus_tag=DOLE_RS09180;product=MarR family transcriptional regulator;protein_id=WP_012175206.1;transl_table=11 NC_009943.1 RefSeq gene 2153988 2157986 . + . ID=gene-DOLE_RS17360;Name=DOLE_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17360;old_locus_tag=Dole_1787 NC_009943.1 Protein Homology CDS 2153988 2157986 . + 0 ID=cds-WP_012175207.1;Parent=gene-DOLE_RS17360;Dbxref=Genbank:WP_012175207.1;Name=WP_012175207.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039815.1;locus_tag=DOLE_RS17360;product=thrombospondin type 3 repeat-containing protein;protein_id=WP_012175207.1;transl_table=11 NC_009943.1 RefSeq gene 2159042 2161699 . + . ID=gene-DOLE_RS09190;Name=DOLE_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09190;old_locus_tag=Dole_1788 NC_009943.1 GeneMarkS-2+ CDS 2159042 2161699 . + 0 ID=cds-WP_153304401.1;Parent=gene-DOLE_RS09190;Dbxref=Genbank:WP_153304401.1;Name=WP_153304401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09190;product=hypothetical protein;protein_id=WP_153304401.1;transl_table=11 NC_009943.1 RefSeq gene 2161724 2165095 . + . ID=gene-DOLE_RS09195;Name=DOLE_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09195;old_locus_tag=Dole_1789 NC_009943.1 GeneMarkS-2+ CDS 2161724 2165095 . + 0 ID=cds-WP_012175209.1;Parent=gene-DOLE_RS09195;Dbxref=Genbank:WP_012175209.1;Name=WP_012175209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09195;product=hypothetical protein;protein_id=WP_012175209.1;transl_table=11 NC_009943.1 RefSeq gene 2166467 2167507 . + . ID=gene-DOLE_RS09200;Name=DOLE_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09200 NC_009943.1 GeneMarkS-2+ CDS 2166467 2167507 . + 0 ID=cds-WP_041280467.1;Parent=gene-DOLE_RS09200;Dbxref=Genbank:WP_041280467.1;Name=WP_041280467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09200;product=hypothetical protein;protein_id=WP_041280467.1;transl_table=11 NC_009943.1 RefSeq gene 2167666 2169675 . + . ID=gene-DOLE_RS09205;Name=DOLE_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09205;old_locus_tag=Dole_1791 NC_009943.1 Protein Homology CDS 2167666 2169675 . + 0 ID=cds-WP_012175211.1;Parent=gene-DOLE_RS09205;Dbxref=Genbank:WP_012175211.1;Name=WP_012175211.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039776.1;locus_tag=DOLE_RS09205;product=GEVED domain-containing protein;protein_id=WP_012175211.1;transl_table=11 NC_009943.1 RefSeq gene 2170069 2172867 . + . ID=gene-DOLE_RS09210;Name=DOLE_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09210;old_locus_tag=Dole_1792 NC_009943.1 Protein Homology CDS 2170069 2172867 . + 0 ID=cds-WP_012175212.1;Parent=gene-DOLE_RS09210;Dbxref=Genbank:WP_012175212.1;Name=WP_012175212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025006.2;locus_tag=DOLE_RS09210;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=WP_012175212.1;transl_table=11 NC_009943.1 RefSeq gene 2173072 2173746 . + . ID=gene-DOLE_RS09215;Name=DOLE_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09215;old_locus_tag=Dole_1793 NC_009943.1 Protein Homology CDS 2173072 2173746 . + 0 ID=cds-WP_012175213.1;Parent=gene-DOLE_RS09215;Dbxref=Genbank:WP_012175213.1;Name=WP_012175213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012271.2;locus_tag=DOLE_RS09215;product=fibronectin type III domain-containing protein;protein_id=WP_012175213.1;transl_table=11 NC_009943.1 RefSeq gene 2173800 2174714 . + . ID=gene-DOLE_RS09220;Name=DOLE_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09220;old_locus_tag=Dole_1794 NC_009943.1 Protein Homology CDS 2173800 2174714 . + 0 ID=cds-WP_041280468.1;Parent=gene-DOLE_RS09220;Dbxref=Genbank:WP_041280468.1;Name=WP_041280468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024860.2;locus_tag=DOLE_RS09220;product=sulfotransferase;protein_id=WP_041280468.1;transl_table=11 NC_009943.1 RefSeq gene 2174714 2175658 . + . ID=gene-DOLE_RS09225;Name=DOLE_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09225;old_locus_tag=Dole_1795 NC_009943.1 Protein Homology CDS 2174714 2175658 . + 0 ID=cds-WP_083766566.1;Parent=gene-DOLE_RS09225;Dbxref=Genbank:WP_083766566.1;Name=WP_083766566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024860.2;locus_tag=DOLE_RS09225;product=sulfotransferase;protein_id=WP_083766566.1;transl_table=11 NC_009943.1 RefSeq gene 2175686 2177047 . + . ID=gene-DOLE_RS09230;Name=DOLE_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09230;old_locus_tag=Dole_1796 NC_009943.1 Protein Homology CDS 2175686 2177047 . + 0 ID=cds-WP_012175216.1;Parent=gene-DOLE_RS09230;Dbxref=Genbank:WP_012175216.1;Name=WP_012175216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723277.1;locus_tag=DOLE_RS09230;product=flippase;protein_id=WP_012175216.1;transl_table=11 NC_009943.1 RefSeq gene 2177044 2178096 . + . ID=gene-DOLE_RS17365;Name=DOLE_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17365;old_locus_tag=Dole_1797 NC_009943.1 Protein Homology CDS 2177044 2178096 . + 0 ID=cds-WP_012175217.1;Parent=gene-DOLE_RS17365;Dbxref=Genbank:WP_012175217.1;Name=WP_012175217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021127.2;locus_tag=DOLE_RS17365;product=CapA family protein;protein_id=WP_012175217.1;transl_table=11 NC_009943.1 RefSeq gene 2178093 2178980 . + . ID=gene-DOLE_RS09240;Name=DOLE_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09240;old_locus_tag=Dole_1798 NC_009943.1 Protein Homology CDS 2178093 2178980 . + 0 ID=cds-WP_012175218.1;Parent=gene-DOLE_RS09240;Dbxref=Genbank:WP_012175218.1;Name=WP_012175218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024860.2;locus_tag=DOLE_RS09240;product=sulfotransferase;protein_id=WP_012175218.1;transl_table=11 NC_009943.1 RefSeq gene 2178981 2179937 . + . ID=gene-DOLE_RS09245;Name=DOLE_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09245;old_locus_tag=Dole_1799 NC_009943.1 GeneMarkS-2+ CDS 2178981 2179937 . + 0 ID=cds-WP_012175219.1;Parent=gene-DOLE_RS09245;Dbxref=Genbank:WP_012175219.1;Name=WP_012175219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09245;product=hypothetical protein;protein_id=WP_012175219.1;transl_table=11 NC_009943.1 RefSeq gene 2179939 2181285 . + . ID=gene-DOLE_RS09250;Name=DOLE_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09250;old_locus_tag=Dole_1800 NC_009943.1 GeneMarkS-2+ CDS 2179939 2181285 . + 0 ID=cds-WP_012175220.1;Parent=gene-DOLE_RS09250;Dbxref=Genbank:WP_012175220.1;Name=WP_012175220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09250;product=phenylacetate--CoA ligase family protein;protein_id=WP_012175220.1;transl_table=11 NC_009943.1 RefSeq gene 2181285 2182727 . + . ID=gene-DOLE_RS09255;Name=DOLE_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09255;old_locus_tag=Dole_1801 NC_009943.1 Protein Homology CDS 2181285 2182727 . + 0 ID=cds-WP_012175221.1;Parent=gene-DOLE_RS09255;Dbxref=Genbank:WP_012175221.1;Name=WP_012175221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016800.2;locus_tag=DOLE_RS09255;product=O-antigen ligase family protein;protein_id=WP_012175221.1;transl_table=11 NC_009943.1 RefSeq gene 2182717 2183832 . + . ID=gene-DOLE_RS09260;Name=DOLE_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09260;old_locus_tag=Dole_1802 NC_009943.1 Protein Homology CDS 2182717 2183832 . + 0 ID=cds-WP_012175222.1;Parent=gene-DOLE_RS09260;Dbxref=Genbank:WP_012175222.1;Name=WP_012175222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024868.2;locus_tag=DOLE_RS09260;product=glycosyltransferase family 4 protein;protein_id=WP_012175222.1;transl_table=11 NC_009943.1 RefSeq gene 2184458 2184964 . + . ID=gene-DOLE_RS18590;Name=DOLE_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18590 NC_009943.1 Protein Homology CDS 2184458 2184964 . + 0 ID=cds-WP_232362743.1;Parent=gene-DOLE_RS18590;Dbxref=Genbank:WP_232362743.1;Name=WP_232362743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=DOLE_RS18590;product=glycosyltransferase;protein_id=WP_232362743.1;transl_table=11 NC_009943.1 RefSeq gene 2185013 2186260 . + . ID=gene-DOLE_RS09270;Name=DOLE_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09270;old_locus_tag=Dole_1804 NC_009943.1 Protein Homology CDS 2185013 2186260 . + 0 ID=cds-WP_012175224.1;Parent=gene-DOLE_RS09270;Dbxref=Genbank:WP_012175224.1;Name=WP_012175224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.2;locus_tag=DOLE_RS09270;product=glycosyltransferase family 4 protein;protein_id=WP_012175224.1;transl_table=11 NC_009943.1 RefSeq gene 2186288 2187304 . + . ID=gene-DOLE_RS09275;Name=DOLE_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09275;old_locus_tag=Dole_1805 NC_009943.1 GeneMarkS-2+ CDS 2186288 2187304 . + 0 ID=cds-WP_012175225.1;Parent=gene-DOLE_RS09275;Dbxref=Genbank:WP_012175225.1;Name=WP_012175225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09275;product=hypothetical protein;protein_id=WP_012175225.1;transl_table=11 NC_009943.1 RefSeq gene 2187340 2188272 . + . ID=gene-DOLE_RS17375;Name=DOLE_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17375;old_locus_tag=Dole_1806 NC_009943.1 Protein Homology CDS 2187340 2188272 . + 0 ID=cds-WP_012175226.1;Parent=gene-DOLE_RS17375;Dbxref=Genbank:WP_012175226.1;Name=WP_012175226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=DOLE_RS17375;product=class I SAM-dependent methyltransferase;protein_id=WP_012175226.1;transl_table=11 NC_009943.1 RefSeq gene 2188365 2189438 . + . ID=gene-DOLE_RS09285;Name=DOLE_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09285;old_locus_tag=Dole_1807 NC_009943.1 Protein Homology CDS 2188365 2189438 . + 0 ID=cds-WP_041281020.1;Parent=gene-DOLE_RS09285;Dbxref=Genbank:WP_041281020.1;Name=WP_041281020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904396.1;locus_tag=DOLE_RS09285;product=radical SAM protein;protein_id=WP_041281020.1;transl_table=11 NC_009943.1 RefSeq gene 2189446 2190567 . + . ID=gene-DOLE_RS09290;Name=DOLE_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09290;old_locus_tag=Dole_1808 NC_009943.1 Protein Homology CDS 2189446 2190567 . + 0 ID=cds-WP_012175228.1;Parent=gene-DOLE_RS09290;Dbxref=Genbank:WP_012175228.1;Name=WP_012175228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904397.1;locus_tag=DOLE_RS09290;product=glycosyltransferase family 4 protein;protein_id=WP_012175228.1;transl_table=11 NC_009943.1 RefSeq gene 2191131 2192126 . - . ID=gene-DOLE_RS09295;Name=DOLE_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09295;old_locus_tag=Dole_1809 NC_009943.1 Protein Homology CDS 2191131 2192126 . - 0 ID=cds-WP_012174904.1-2;Parent=gene-DOLE_RS09295;Dbxref=Genbank:WP_012174904.1;Name=WP_012174904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013698.2;locus_tag=DOLE_RS09295;product=IS110 family transposase;protein_id=WP_012174904.1;transl_table=11 NC_009943.1 RefSeq gene 2192308 2193840 . + . ID=gene-DOLE_RS09300;Name=DOLE_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09300;old_locus_tag=Dole_1810 NC_009943.1 Protein Homology CDS 2192308 2193840 . + 0 ID=cds-WP_012175229.1;Parent=gene-DOLE_RS09300;Dbxref=Genbank:WP_012175229.1;Name=WP_012175229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03025.1;locus_tag=DOLE_RS09300;product=sugar transferase;protein_id=WP_012175229.1;transl_table=11 NC_009943.1 RefSeq gene 2193973 2194233 . + . ID=gene-DOLE_RS09305;Name=DOLE_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09305;old_locus_tag=Dole_1811 NC_009943.1 Protein Homology CDS 2193973 2194233 . + 0 ID=cds-WP_012175230.1;Parent=gene-DOLE_RS09305;Dbxref=Genbank:WP_012175230.1;Name=WP_012175230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587742.1;locus_tag=DOLE_RS09305;product=toxin-antitoxin system HicB family antitoxin;protein_id=WP_012175230.1;transl_table=11 NC_009943.1 RefSeq gene 2194230 2194628 . + . ID=gene-DOLE_RS09310;Name=DOLE_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09310;old_locus_tag=Dole_1812 NC_009943.1 Protein Homology CDS 2194230 2194628 . + 0 ID=cds-WP_012175231.1;Parent=gene-DOLE_RS09310;Dbxref=Genbank:WP_012175231.1;Name=WP_012175231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587743.1;locus_tag=DOLE_RS09310;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012175231.1;transl_table=11 NC_009943.1 RefSeq gene 2194794 2195942 . + . ID=gene-DOLE_RS09315;Name=DOLE_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09315;old_locus_tag=Dole_1813 NC_009943.1 Protein Homology CDS 2194794 2195942 . + 0 ID=cds-WP_012175232.1;Parent=gene-DOLE_RS09315;Dbxref=Genbank:WP_012175232.1;Name=WP_012175232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=DOLE_RS09315;product=AAA family ATPase;protein_id=WP_012175232.1;transl_table=11 NC_009943.1 RefSeq gene 2196355 2196588 . + . ID=gene-DOLE_RS09325;Name=DOLE_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09325;old_locus_tag=Dole_1814 NC_009943.1 Protein Homology CDS 2196355 2196588 . + 0 ID=cds-WP_041280470.1;Parent=gene-DOLE_RS09325;Dbxref=Genbank:WP_041280470.1;Name=WP_041280470.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016167.2;locus_tag=DOLE_RS09325;product=DUF433 domain-containing protein;protein_id=WP_041280470.1;transl_table=11 NC_009943.1 RefSeq gene 2196585 2196962 . + . ID=gene-DOLE_RS09330;Name=DOLE_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09330;old_locus_tag=Dole_1815 NC_009943.1 Protein Homology CDS 2196585 2196962 . + 0 ID=cds-WP_012175234.1;Parent=gene-DOLE_RS09330;Dbxref=Genbank:WP_012175234.1;Name=WP_012175234.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037832.2;locus_tag=DOLE_RS09330;product=DUF5615 family PIN-like protein;protein_id=WP_012175234.1;transl_table=11 NC_009943.1 RefSeq gene 2197560 2198096 . - . ID=gene-DOLE_RS18595;Name=DOLE_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18595 NC_009943.1 GeneMarkS-2+ CDS 2197560 2198096 . - 0 ID=cds-WP_232362695.1;Parent=gene-DOLE_RS18595;Dbxref=Genbank:WP_232362695.1;Name=WP_232362695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18595;product=hypothetical protein;protein_id=WP_232362695.1;transl_table=11 NC_009943.1 RefSeq gene 2198796 2200115 . + . ID=gene-DOLE_RS09345;Name=DOLE_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09345;old_locus_tag=Dole_1818 NC_009943.1 Protein Homology CDS 2198796 2200115 . + 0 ID=cds-WP_012175237.1;Parent=gene-DOLE_RS09345;Dbxref=Genbank:WP_012175237.1;Name=WP_012175237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03026.1;locus_tag=DOLE_RS09345;product=nucleotide sugar dehydrogenase;protein_id=WP_012175237.1;transl_table=11 NC_009943.1 RefSeq gene 2200142 2201083 . + . ID=gene-DOLE_RS09350;Name=DOLE_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09350;old_locus_tag=Dole_1819 NC_009943.1 Protein Homology CDS 2200142 2201083 . + 0 ID=cds-WP_012175238.1;Parent=gene-DOLE_RS09350;Dbxref=Genbank:WP_012175238.1;Name=WP_012175238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587593.1;locus_tag=DOLE_RS09350;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_012175238.1;transl_table=11 NC_009943.1 RefSeq gene 2201098 2201661 . + . ID=gene-DOLE_RS09355;Name=DOLE_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09355;old_locus_tag=Dole_1820 NC_009943.1 Protein Homology CDS 2201098 2201661 . + 0 ID=cds-WP_012175239.1;Parent=gene-DOLE_RS09355;Dbxref=Genbank:WP_012175239.1;Name=WP_012175239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017866035.1;locus_tag=DOLE_RS09355;product=acyltransferase;protein_id=WP_012175239.1;transl_table=11 NC_009943.1 RefSeq gene 2201688 2203685 . - . ID=gene-DOLE_RS09360;Name=DOLE_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09360;old_locus_tag=Dole_1821 NC_009943.1 Protein Homology CDS 2201688 2203685 . - 0 ID=cds-WP_012175240.1;Parent=gene-DOLE_RS09360;Dbxref=Genbank:WP_012175240.1;Name=WP_012175240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968382.1;locus_tag=DOLE_RS09360;product=sugar transferase;protein_id=WP_012175240.1;transl_table=11 NC_009943.1 RefSeq gene 2204069 2204818 . - . ID=gene-DOLE_RS09365;Name=DOLE_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09365;old_locus_tag=Dole_1822 NC_009943.1 Protein Homology CDS 2204069 2204818 . - 0 ID=cds-WP_012175241.1;Parent=gene-DOLE_RS09365;Dbxref=Genbank:WP_012175241.1;Name=WP_012175241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968370.1;locus_tag=DOLE_RS09365;product=hypothetical protein;protein_id=WP_012175241.1;transl_table=11 NC_009943.1 RefSeq gene 2204839 2206014 . - . ID=gene-DOLE_RS09370;Name=DOLE_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09370;old_locus_tag=Dole_1823 NC_009943.1 GeneMarkS-2+ CDS 2204839 2206014 . - 0 ID=cds-WP_153304404.1;Parent=gene-DOLE_RS09370;Dbxref=Genbank:WP_153304404.1;Name=WP_153304404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09370;product=hypothetical protein;protein_id=WP_153304404.1;transl_table=11 NC_009943.1 RefSeq gene 2205974 2206648 . - . ID=gene-DOLE_RS09375;Name=DOLE_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09375;old_locus_tag=Dole_1824 NC_009943.1 Protein Homology CDS 2205974 2206648 . - 0 ID=cds-WP_012175243.1;Parent=gene-DOLE_RS09375;Dbxref=Genbank:WP_012175243.1;Name=WP_012175243.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.2;locus_tag=DOLE_RS09375;product=DapH/DapD/GlmU-related protein;protein_id=WP_012175243.1;transl_table=11 NC_009943.1 RefSeq gene 2206685 2207794 . - . ID=gene-DOLE_RS09380;Name=DOLE_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09380;old_locus_tag=Dole_1825 NC_009943.1 Protein Homology CDS 2206685 2207794 . - 0 ID=cds-WP_041280472.1;Parent=gene-DOLE_RS09380;Dbxref=Genbank:WP_041280472.1;Name=WP_041280472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=DOLE_RS09380;product=glycosyltransferase;protein_id=WP_041280472.1;transl_table=11 NC_009943.1 RefSeq gene 2207989 2209341 . - . ID=gene-DOLE_RS09385;Name=DOLE_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09385;old_locus_tag=Dole_1826 NC_009943.1 Protein Homology CDS 2207989 2209341 . - 0 ID=cds-WP_012174089.1-4;Parent=gene-DOLE_RS09385;Dbxref=Genbank:WP_012174089.1;Name=WP_012174089.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174089.1;locus_tag=DOLE_RS09385;product=ISNCY-like element ISDol1 family transposase;protein_id=WP_012174089.1;transl_table=11 NC_009943.1 RefSeq gene 2209666 2211018 . - . ID=gene-DOLE_RS09390;Name=DOLE_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09390;old_locus_tag=Dole_1827 NC_009943.1 Protein Homology CDS 2209666 2211018 . - 0 ID=cds-WP_012174089.1-5;Parent=gene-DOLE_RS09390;Dbxref=Genbank:WP_012174089.1;Name=WP_012174089.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174089.1;locus_tag=DOLE_RS09390;product=ISNCY-like element ISDol1 family transposase;protein_id=WP_012174089.1;transl_table=11 NC_009943.1 RefSeq gene 2211175 2212302 . - . ID=gene-DOLE_RS09395;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=DOLE_RS09395;old_locus_tag=Dole_1828 NC_009943.1 Protein Homology CDS 2211175 2212302 . - 0 ID=cds-WP_012175245.1;Parent=gene-DOLE_RS09395;Dbxref=Genbank:WP_012175245.1;Name=WP_012175245.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404640.1;locus_tag=DOLE_RS09395;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_012175245.1;transl_table=11 NC_009943.1 RefSeq gene 2212338 2213504 . - . ID=gene-DOLE_RS09400;Name=DOLE_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09400;old_locus_tag=Dole_1829 NC_009943.1 GeneMarkS-2+ CDS 2212338 2213504 . - 0 ID=cds-WP_012175246.1;Parent=gene-DOLE_RS09400;Dbxref=Genbank:WP_012175246.1;Name=WP_012175246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09400;product=hypothetical protein;protein_id=WP_012175246.1;transl_table=11 NC_009943.1 RefSeq gene 2213497 2214456 . - . ID=gene-DOLE_RS09405;Name=DOLE_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09405;old_locus_tag=Dole_1830 NC_009943.1 Protein Homology CDS 2213497 2214456 . - 0 ID=cds-WP_012175247.1;Parent=gene-DOLE_RS09405;Dbxref=Genbank:WP_012175247.1;Name=WP_012175247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024860.2;locus_tag=DOLE_RS09405;product=sulfotransferase;protein_id=WP_012175247.1;transl_table=11 NC_009943.1 RefSeq gene 2214464 2215483 . - . ID=gene-DOLE_RS09410;Name=DOLE_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09410;old_locus_tag=Dole_1831 NC_009943.1 Protein Homology CDS 2214464 2215483 . - 0 ID=cds-WP_012175248.1;Parent=gene-DOLE_RS09410;Dbxref=Genbank:WP_012175248.1;Name=WP_012175248.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024871.2;locus_tag=DOLE_RS09410;product=GNAT family N-acetyltransferase;protein_id=WP_012175248.1;transl_table=11 NC_009943.1 RefSeq gene 2215497 2216186 . - . ID=gene-DOLE_RS09415;Name=DOLE_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09415;old_locus_tag=Dole_1832 NC_009943.1 GeneMarkS-2+ CDS 2215497 2216186 . - 0 ID=cds-WP_153304405.1;Parent=gene-DOLE_RS09415;Dbxref=Genbank:WP_153304405.1;Name=WP_153304405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09415;product=polysaccharide deacetylase family protein;protein_id=WP_153304405.1;transl_table=11 NC_009943.1 RefSeq gene 2216326 2217387 . - . ID=gene-DOLE_RS09420;Name=DOLE_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09420;old_locus_tag=Dole_1833 NC_009943.1 Protein Homology CDS 2216326 2217387 . - 0 ID=cds-WP_167320869.1;Parent=gene-DOLE_RS09420;Dbxref=Genbank:WP_167320869.1;Name=WP_167320869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=DOLE_RS09420;product=glycosyltransferase family 4 protein;protein_id=WP_167320869.1;transl_table=11 NC_009943.1 RefSeq gene 2217437 2218597 . - . ID=gene-DOLE_RS09425;Name=DOLE_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09425;old_locus_tag=Dole_1834 NC_009943.1 GeneMarkS-2+ CDS 2217437 2218597 . - 0 ID=cds-WP_153304406.1;Parent=gene-DOLE_RS09425;Dbxref=Genbank:WP_153304406.1;Name=WP_153304406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09425;product=hypothetical protein;protein_id=WP_153304406.1;transl_table=11 NC_009943.1 RefSeq gene 2218808 2219785 . - . ID=gene-DOLE_RS09430;Name=DOLE_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09430;old_locus_tag=Dole_1835 NC_009943.1 Protein Homology CDS 2218808 2219785 . - 0 ID=cds-WP_083766569.1;Parent=gene-DOLE_RS09430;Dbxref=Genbank:WP_083766569.1;Name=WP_083766569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024860.2;locus_tag=DOLE_RS09430;product=sulfotransferase;protein_id=WP_083766569.1;transl_table=11 NC_009943.1 RefSeq gene 2219798 2221138 . - . ID=gene-DOLE_RS09435;Name=DOLE_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09435;old_locus_tag=Dole_1836 NC_009943.1 Protein Homology CDS 2219798 2221138 . - 0 ID=cds-WP_012175253.1;Parent=gene-DOLE_RS09435;Dbxref=Genbank:WP_012175253.1;Name=WP_012175253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723277.1;locus_tag=DOLE_RS09435;product=flippase;protein_id=WP_012175253.1;transl_table=11 NC_009943.1 RefSeq gene 2221192 2222277 . - . ID=gene-DOLE_RS09440;Name=DOLE_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09440;old_locus_tag=Dole_1837 NC_009943.1 Protein Homology CDS 2221192 2222277 . - 0 ID=cds-WP_041280477.1;Parent=gene-DOLE_RS09440;Dbxref=Genbank:WP_041280477.1;Name=WP_041280477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968391.1;locus_tag=DOLE_RS09440;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_041280477.1;transl_table=11 NC_009943.1 RefSeq gene 2222633 2224990 . - . ID=gene-DOLE_RS09445;Name=DOLE_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09445;old_locus_tag=Dole_1838 NC_009943.1 Protein Homology CDS 2222633 2224990 . - 0 ID=cds-WP_012175255.1;Parent=gene-DOLE_RS09445;Dbxref=Genbank:WP_012175255.1;Name=WP_012175255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175074.1;locus_tag=DOLE_RS09445;product=O-antigen ligase family protein;protein_id=WP_012175255.1;transl_table=11 NC_009943.1 RefSeq gene 2226211 2226456 . + . ID=gene-DOLE_RS09455;Name=DOLE_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09455;old_locus_tag=Dole_1839 NC_009943.1 Protein Homology CDS 2226211 2226456 . + 0 ID=cds-WP_012175256.1;Parent=gene-DOLE_RS09455;Dbxref=Genbank:WP_012175256.1;Name=WP_012175256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878474.1;locus_tag=DOLE_RS09455;product=hypothetical protein;protein_id=WP_012175256.1;transl_table=11 NC_009943.1 RefSeq gene 2226453 2226860 . + . ID=gene-DOLE_RS09460;Name=DOLE_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09460;old_locus_tag=Dole_1840 NC_009943.1 Protein Homology CDS 2226453 2226860 . + 0 ID=cds-WP_012175257.1;Parent=gene-DOLE_RS09460;Dbxref=Genbank:WP_012175257.1;Name=WP_012175257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878475.1;locus_tag=DOLE_RS09460;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012175257.1;transl_table=11 NC_009943.1 RefSeq gene 2227181 2228383 . + . ID=gene-DOLE_RS09465;Name=DOLE_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09465;old_locus_tag=Dole_1841 NC_009943.1 Protein Homology CDS 2227181 2228383 . + 0 ID=cds-WP_012175258.1;Parent=gene-DOLE_RS09465;Dbxref=Genbank:WP_012175258.1;Name=WP_012175258.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=DOLE_RS09465;product=ATP-binding protein;protein_id=WP_012175258.1;transl_table=11 NC_009943.1 RefSeq gene 2228563 2229816 . - . ID=gene-DOLE_RS09470;Name=DOLE_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09470;old_locus_tag=Dole_1842 NC_009943.1 Protein Homology CDS 2228563 2229816 . - 0 ID=cds-WP_012175259.1;Parent=gene-DOLE_RS09470;Dbxref=Genbank:WP_012175259.1;Name=WP_012175259.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=DOLE_RS09470;product=Fic family protein;protein_id=WP_012175259.1;transl_table=11 NC_009943.1 RefSeq gene 2230268 2231626 . - . ID=gene-DOLE_RS09475;Name=DOLE_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09475;old_locus_tag=Dole_1843 NC_009943.1 Protein Homology CDS 2230268 2231626 . - 0 ID=cds-WP_012175260.1;Parent=gene-DOLE_RS09475;Dbxref=Genbank:WP_012175260.1;Name=WP_012175260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=DOLE_RS09475;product=AAA family ATPase;protein_id=WP_012175260.1;transl_table=11 NC_009943.1 RefSeq gene 2231973 2232209 . + . ID=gene-DOLE_RS09480;Name=DOLE_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09480;old_locus_tag=Dole_1844 NC_009943.1 Protein Homology CDS 2231973 2232209 . + 0 ID=cds-WP_041280479.1;Parent=gene-DOLE_RS09480;Dbxref=Genbank:WP_041280479.1;Name=WP_041280479.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: protein motif:HMM:NF014643.2;locus_tag=DOLE_RS09480;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_041280479.1;transl_table=11 NC_009943.1 RefSeq gene 2232212 2232661 . + . ID=gene-DOLE_RS09485;Name=DOLE_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09485;old_locus_tag=Dole_1845 NC_009943.1 Protein Homology CDS 2232212 2232661 . + 0 ID=cds-WP_012175262.1;Parent=gene-DOLE_RS09485;Dbxref=Genbank:WP_012175262.1;Name=WP_012175262.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=DOLE_RS09485;product=PIN domain-containing protein;protein_id=WP_012175262.1;transl_table=11 NC_009943.1 RefSeq gene 2232835 2233131 . + . ID=gene-DOLE_RS09490;Name=DOLE_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09490;old_locus_tag=Dole_1846 NC_009943.1 GeneMarkS-2+ CDS 2232835 2233131 . + 0 ID=cds-WP_041280480.1;Parent=gene-DOLE_RS09490;Dbxref=Genbank:WP_041280480.1;Name=WP_041280480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09490;product=hypothetical protein;protein_id=WP_041280480.1;transl_table=11 NC_009943.1 RefSeq gene 2233128 2233811 . + . ID=gene-DOLE_RS09495;Name=DOLE_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09495;old_locus_tag=Dole_1847 NC_009943.1 Protein Homology CDS 2233128 2233811 . + 0 ID=cds-WP_012175264.1;Parent=gene-DOLE_RS09495;Dbxref=Genbank:WP_012175264.1;Name=WP_012175264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.2;locus_tag=DOLE_RS09495;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_012175264.1;transl_table=11 NC_009943.1 RefSeq gene 2234150 2235163 . + . ID=gene-DOLE_RS09500;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=DOLE_RS09500;old_locus_tag=Dole_1848 NC_009943.1 Protein Homology CDS 2234150 2235163 . + 0 ID=cds-WP_012175265.1;Parent=gene-DOLE_RS09500;Dbxref=Genbank:WP_012175265.1;Name=WP_012175265.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904544.1;locus_tag=DOLE_RS09500;product=UDP-glucose 4-epimerase GalE;protein_id=WP_012175265.1;transl_table=11 NC_009943.1 RefSeq gene 2235341 2236981 . + . ID=gene-DOLE_RS09505;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=DOLE_RS09505;old_locus_tag=Dole_1849 NC_009943.1 Protein Homology CDS 2235341 2236981 . + 0 ID=cds-WP_012175266.1;Parent=gene-DOLE_RS09505;Dbxref=Genbank:WP_012175266.1;Name=WP_012175266.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175266.1;locus_tag=DOLE_RS09505;product=glucose-6-phosphate isomerase;protein_id=WP_012175266.1;transl_table=11 NC_009943.1 RefSeq gene 2237185 2238198 . - . ID=gene-DOLE_RS09510;Name=DOLE_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09510;old_locus_tag=Dole_1850 NC_009943.1 Protein Homology CDS 2237185 2238198 . - 0 ID=cds-WP_012175267.1;Parent=gene-DOLE_RS09510;Dbxref=Genbank:WP_012175267.1;Name=WP_012175267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904371.1;locus_tag=DOLE_RS09510;product=ketoacyl-ACP synthase III;protein_id=WP_012175267.1;transl_table=11 NC_009943.1 RefSeq gene 2238344 2239312 . - . ID=gene-DOLE_RS09515;Name=DOLE_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09515;old_locus_tag=Dole_1851 NC_009943.1 Protein Homology CDS 2238344 2239312 . - 0 ID=cds-WP_167320871.1;Parent=gene-DOLE_RS09515;Dbxref=Genbank:WP_167320871.1;Name=WP_167320871.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016648.2;locus_tag=DOLE_RS09515;product=FecR family protein;protein_id=WP_167320871.1;transl_table=11 NC_009943.1 RefSeq gene 2239745 2240593 . - . ID=gene-DOLE_RS09520;Name=DOLE_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09520;old_locus_tag=Dole_1852 NC_009943.1 Protein Homology CDS 2239745 2240593 . - 0 ID=cds-WP_012175269.1;Parent=gene-DOLE_RS09520;Dbxref=Genbank:WP_012175269.1;Name=WP_012175269.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016648.2;locus_tag=DOLE_RS09520;product=FecR family protein;protein_id=WP_012175269.1;transl_table=11 NC_009943.1 RefSeq gene 2240621 2242129 . - . ID=gene-DOLE_RS09525;Name=DOLE_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09525;old_locus_tag=Dole_1853 NC_009943.1 Protein Homology CDS 2240621 2242129 . - 0 ID=cds-WP_012175270.1;Parent=gene-DOLE_RS09525;Dbxref=Genbank:WP_012175270.1;Name=WP_012175270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025910.2;locus_tag=DOLE_RS09525;product=tetratricopeptide repeat protein;protein_id=WP_012175270.1;transl_table=11 NC_009943.1 RefSeq gene 2242146 2243510 . - . ID=gene-DOLE_RS09530;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=DOLE_RS09530;old_locus_tag=Dole_1854 NC_009943.1 Protein Homology CDS 2242146 2243510 . - 0 ID=cds-WP_012175271.1;Parent=gene-DOLE_RS09530;Dbxref=Genbank:WP_012175271.1;Name=WP_012175271.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966202.1;locus_tag=DOLE_RS09530;product=adenylosuccinate lyase;protein_id=WP_012175271.1;transl_table=11 NC_009943.1 RefSeq gene 2243527 2244306 . - . ID=gene-DOLE_RS09535;Name=DOLE_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09535;old_locus_tag=Dole_1855 NC_009943.1 Protein Homology CDS 2243527 2244306 . - 0 ID=cds-WP_012175272.1;Parent=gene-DOLE_RS09535;Dbxref=Genbank:WP_012175272.1;Name=WP_012175272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074130.1;locus_tag=DOLE_RS09535;product=A24 family peptidase;protein_id=WP_012175272.1;transl_table=11 NC_009943.1 RefSeq gene 2244812 2247274 . + . ID=gene-DOLE_RS09545;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=DOLE_RS09545;old_locus_tag=Dole_1856 NC_009943.1 Protein Homology CDS 2244812 2247274 . + 0 ID=cds-WP_012175273.1;Parent=gene-DOLE_RS09545;Dbxref=Genbank:WP_012175273.1;Name=WP_012175273.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610383.1;locus_tag=DOLE_RS09545;product=endopeptidase La;protein_id=WP_012175273.1;transl_table=11 NC_009943.1 RefSeq gene 2247271 2247954 . + . ID=gene-DOLE_RS09550;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=DOLE_RS09550;old_locus_tag=Dole_1857 NC_009943.1 Protein Homology CDS 2247271 2247954 . + 0 ID=cds-WP_012175274.1;Parent=gene-DOLE_RS09550;Dbxref=Genbank:WP_012175274.1;Name=WP_012175274.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR03725.1;locus_tag=DOLE_RS09550;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_012175274.1;transl_table=11 NC_009943.1 cmsearch riboswitch 2248438 2248627 . + . ID=id-NC_009943.1:2248438..2248627;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NC_009943.1 RefSeq gene 2248752 2249012 . + . ID=gene-DOLE_RS09555;Name=DOLE_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09555;old_locus_tag=Dole_1858 NC_009943.1 GeneMarkS-2+ CDS 2248752 2249012 . + 0 ID=cds-WP_012175275.1;Parent=gene-DOLE_RS09555;Dbxref=Genbank:WP_012175275.1;Name=WP_012175275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09555;product=hypothetical protein;protein_id=WP_012175275.1;transl_table=11 NC_009943.1 RefSeq gene 2249026 2251086 . + . ID=gene-DOLE_RS09560;Name=DOLE_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09560;old_locus_tag=Dole_1859 NC_009943.1 Protein Homology CDS 2249026 2251086 . + 0 ID=cds-WP_012175276.1;Parent=gene-DOLE_RS09560;Dbxref=Genbank:WP_012175276.1;Name=WP_012175276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=DOLE_RS09560;product=TonB-dependent receptor;protein_id=WP_012175276.1;transl_table=11 NC_009943.1 RefSeq gene 2251400 2252671 . + . ID=gene-DOLE_RS09565;Name=DOLE_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09565;old_locus_tag=Dole_1860 NC_009943.1 Protein Homology CDS 2251400 2252671 . + 0 ID=cds-WP_012175277.1;Parent=gene-DOLE_RS09565;Dbxref=Genbank:WP_012175277.1;Name=WP_012175277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949975.1;locus_tag=DOLE_RS09565;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012175277.1;transl_table=11 NC_009943.1 RefSeq gene 2252856 2253851 . + . ID=gene-DOLE_RS09570;Name=DOLE_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09570;old_locus_tag=Dole_1861 NC_009943.1 Protein Homology CDS 2252856 2253851 . + 0 ID=cds-WP_012174904.1-3;Parent=gene-DOLE_RS09570;Dbxref=Genbank:WP_012174904.1;Name=WP_012174904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013698.2;locus_tag=DOLE_RS09570;product=IS110 family transposase;protein_id=WP_012174904.1;transl_table=11 NC_009943.1 RefSeq gene 2254410 2255027 . + . ID=gene-DOLE_RS09575;Name=DOLE_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09575;old_locus_tag=Dole_1862 NC_009943.1 Protein Homology CDS 2254410 2255027 . + 0 ID=cds-WP_012175278.1;Parent=gene-DOLE_RS09575;Dbxref=Genbank:WP_012175278.1;Name=WP_012175278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS09575;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175278.1;transl_table=11 NC_009943.1 RefSeq gene 2255039 2255260 . - . ID=gene-DOLE_RS09580;Name=DOLE_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09580;old_locus_tag=Dole_1863 NC_009943.1 GeneMarkS-2+ CDS 2255039 2255260 . - 0 ID=cds-WP_041280483.1;Parent=gene-DOLE_RS09580;Dbxref=Genbank:WP_041280483.1;Name=WP_041280483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09580;product=hypothetical protein;protein_id=WP_041280483.1;transl_table=11 NC_009943.1 RefSeq gene 2255312 2255620 . - . ID=gene-DOLE_RS09585;Name=DOLE_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09585;old_locus_tag=Dole_1864 NC_009943.1 GeneMarkS-2+ CDS 2255312 2255620 . - 0 ID=cds-WP_012175280.1;Parent=gene-DOLE_RS09585;Dbxref=Genbank:WP_012175280.1;Name=WP_012175280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09585;product=hypothetical protein;protein_id=WP_012175280.1;transl_table=11 NC_009943.1 RefSeq gene 2255651 2258251 . - . ID=gene-DOLE_RS09590;Name=DOLE_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09590;old_locus_tag=Dole_1865 NC_009943.1 Protein Homology CDS 2255651 2258251 . - 0 ID=cds-WP_012175281.1;Parent=gene-DOLE_RS09590;Dbxref=Genbank:WP_012175281.1;Name=WP_012175281.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013491.2;locus_tag=DOLE_RS09590;product=PEP/pyruvate-binding domain-containing protein;protein_id=WP_012175281.1;transl_table=11 NC_009943.1 RefSeq gene 2258270 2259202 . - . ID=gene-DOLE_RS09595;Name=DOLE_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09595;old_locus_tag=Dole_1866 NC_009943.1 Protein Homology CDS 2258270 2259202 . - 0 ID=cds-WP_012175282.1;Parent=gene-DOLE_RS09595;Dbxref=Genbank:WP_012175282.1;Name=WP_012175282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012791.2;locus_tag=DOLE_RS09595;product=universal stress protein;protein_id=WP_012175282.1;transl_table=11 NC_009943.1 RefSeq gene 2259429 2259650 . + . ID=gene-DOLE_RS09600;Name=DOLE_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09600;old_locus_tag=Dole_1867 NC_009943.1 Protein Homology CDS 2259429 2259650 . + 0 ID=cds-WP_041281028.1;Parent=gene-DOLE_RS09600;Dbxref=Genbank:WP_041281028.1;Name=WP_041281028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947507.1;locus_tag=DOLE_RS09600;product=hypothetical protein;protein_id=WP_041281028.1;transl_table=11 NC_009943.1 RefSeq gene 2259662 2261824 . + . ID=gene-DOLE_RS09605;Name=DOLE_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09605;old_locus_tag=Dole_1868 NC_009943.1 Protein Homology CDS 2259662 2261824 . + 0 ID=cds-WP_012175284.1;Parent=gene-DOLE_RS09605;Dbxref=Genbank:WP_012175284.1;Name=WP_012175284.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.2;locus_tag=DOLE_RS09605;product=glycosyltransferase family 2 protein;protein_id=WP_012175284.1;transl_table=11 NC_009943.1 RefSeq gene 2261964 2263439 . + . ID=gene-DOLE_RS09610;Name=DOLE_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09610;old_locus_tag=Dole_1869 NC_009943.1 Protein Homology CDS 2261964 2263439 . + 0 ID=cds-WP_012175285.1;Parent=gene-DOLE_RS09610;Dbxref=Genbank:WP_012175285.1;Name=WP_012175285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.2;locus_tag=DOLE_RS09610;product=glycosyltransferase family 39 protein;protein_id=WP_012175285.1;transl_table=11 NC_009943.1 RefSeq gene 2263492 2265267 . + . ID=gene-DOLE_RS09615;Name=DOLE_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09615;old_locus_tag=Dole_1870 NC_009943.1 Protein Homology CDS 2263492 2265267 . + 0 ID=cds-WP_012175286.1;Parent=gene-DOLE_RS09615;Dbxref=Genbank:WP_012175286.1;Name=WP_012175286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS09615;product=MBL fold metallo-hydrolase;protein_id=WP_012175286.1;transl_table=11 NC_009943.1 RefSeq gene 2265396 2266271 . - . ID=gene-DOLE_RS09620;Name=DOLE_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09620;old_locus_tag=Dole_1871 NC_009943.1 GeneMarkS-2+ CDS 2265396 2266271 . - 0 ID=cds-WP_153304407.1;Parent=gene-DOLE_RS09620;Dbxref=Genbank:WP_153304407.1;Name=WP_153304407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09620;product=hypothetical protein;protein_id=WP_153304407.1;transl_table=11 NC_009943.1 RefSeq gene 2266280 2267248 . - . ID=gene-DOLE_RS09625;Name=DOLE_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09625;old_locus_tag=Dole_1872 NC_009943.1 Protein Homology CDS 2266280 2267248 . - 0 ID=cds-WP_041280485.1;Parent=gene-DOLE_RS09625;Dbxref=Genbank:WP_041280485.1;Name=WP_041280485.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013921.2;locus_tag=DOLE_RS09625;product=transposase;protein_id=WP_041280485.1;transl_table=11 NC_009943.1 RefSeq gene 2267442 2269535 . - . ID=gene-DOLE_RS09630;Name=DOLE_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09630;old_locus_tag=Dole_1873 NC_009943.1 GeneMarkS-2+ CDS 2267442 2269535 . - 0 ID=cds-WP_012175289.1;Parent=gene-DOLE_RS09630;Dbxref=Genbank:WP_012175289.1;Name=WP_012175289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09630;product=radical SAM protein;protein_id=WP_012175289.1;transl_table=11 NC_009943.1 RefSeq gene 2269958 2271046 . + . ID=gene-DOLE_RS09635;Name=DOLE_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09635;old_locus_tag=Dole_1874 NC_009943.1 Protein Homology CDS 2269958 2271046 . + 0 ID=cds-WP_012175290.1;Parent=gene-DOLE_RS09635;Dbxref=Genbank:WP_012175290.1;Name=WP_012175290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610294.1;locus_tag=DOLE_RS09635;product=4Fe-4S binding protein;protein_id=WP_012175290.1;transl_table=11 NC_009943.1 RefSeq gene 2271324 2272847 . - . ID=gene-DOLE_RS09640;Name=DOLE_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09640;old_locus_tag=Dole_1875 NC_009943.1 GeneMarkS-2+ CDS 2271324 2272847 . - 0 ID=cds-WP_012175291.1;Parent=gene-DOLE_RS09640;Dbxref=Genbank:WP_012175291.1;Name=WP_012175291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09640;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_012175291.1;transl_table=11 NC_009943.1 RefSeq gene 2273248 2275494 . - . ID=gene-DOLE_RS09645;Name=DOLE_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09645;old_locus_tag=Dole_1876 NC_009943.1 Protein Homology CDS 2273248 2275494 . - 0 ID=cds-WP_012175292.1;Parent=gene-DOLE_RS09645;Dbxref=Genbank:WP_012175292.1;Name=WP_012175292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013164326.1;locus_tag=DOLE_RS09645;product=heavy metal translocating P-type ATPase;protein_id=WP_012175292.1;transl_table=11 NC_009943.1 RefSeq gene 2275523 2275726 . - . ID=gene-DOLE_RS09650;Name=DOLE_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09650;old_locus_tag=Dole_1877 NC_009943.1 Protein Homology CDS 2275523 2275726 . - 0 ID=cds-WP_012175293.1;Parent=gene-DOLE_RS09650;Dbxref=Genbank:WP_012175293.1;Name=WP_012175293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877697.1;locus_tag=DOLE_RS09650;product=heavy-metal-associated domain-containing protein;protein_id=WP_012175293.1;transl_table=11 NC_009943.1 RefSeq gene 2276222 2277049 . + . ID=gene-DOLE_RS17390;Name=DOLE_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17390;old_locus_tag=Dole_1878 NC_009943.1 Protein Homology CDS 2276222 2277049 . + 0 ID=cds-WP_012175294.1;Parent=gene-DOLE_RS17390;Dbxref=Genbank:WP_012175294.1;Name=WP_012175294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012257.2;locus_tag=DOLE_RS17390;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_012175294.1;transl_table=11 NC_009943.1 RefSeq gene 2277060 2278751 . - . ID=gene-DOLE_RS09660;Name=DOLE_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09660;old_locus_tag=Dole_1879 NC_009943.1 Protein Homology CDS 2277060 2278751 . - 0 ID=cds-WP_012175295.1;Parent=gene-DOLE_RS09660;Dbxref=Genbank:WP_012175295.1;Name=WP_012175295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405395.1;locus_tag=DOLE_RS09660;product=hypothetical protein;protein_id=WP_012175295.1;transl_table=11 NC_009943.1 RefSeq gene 2278858 2279709 . - . ID=gene-DOLE_RS09665;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=DOLE_RS09665;old_locus_tag=Dole_1880 NC_009943.1 Protein Homology CDS 2278858 2279709 . - 0 ID=cds-WP_012175296.1;Parent=gene-DOLE_RS09665;Dbxref=Genbank:WP_012175296.1;Name=WP_012175296.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175296.1;locus_tag=DOLE_RS09665;product=deoxyribonuclease IV;protein_id=WP_012175296.1;transl_table=11 NC_009943.1 RefSeq gene 2279890 2280630 . + . ID=gene-DOLE_RS09670;Name=DOLE_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09670;old_locus_tag=Dole_1881 NC_009943.1 Protein Homology CDS 2279890 2280630 . + 0 ID=cds-WP_012175297.1;Parent=gene-DOLE_RS09670;Dbxref=Genbank:WP_012175297.1;Name=WP_012175297.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013702.2;locus_tag=DOLE_RS09670;product=lysophospholipid acyltransferase family protein;protein_id=WP_012175297.1;transl_table=11 NC_009943.1 RefSeq gene 2280650 2281057 . - . ID=gene-DOLE_RS09675;Name=DOLE_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09675;old_locus_tag=Dole_1882 NC_009943.1 GeneMarkS-2+ CDS 2280650 2281057 . - 0 ID=cds-WP_012175298.1;Parent=gene-DOLE_RS09675;Dbxref=Genbank:WP_012175298.1;Name=WP_012175298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09675;product=type IV pilus assembly PilZ;protein_id=WP_012175298.1;transl_table=11 NC_009943.1 RefSeq gene 2281320 2282210 . + . ID=gene-DOLE_RS09680;Name=DOLE_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09680;old_locus_tag=Dole_1883 NC_009943.1 Protein Homology CDS 2281320 2282210 . + 0 ID=cds-WP_012175299.1;Parent=gene-DOLE_RS09680;Dbxref=Genbank:WP_012175299.1;Name=WP_012175299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022188.2;locus_tag=DOLE_RS09680;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_012175299.1;transl_table=11 NC_009943.1 RefSeq gene 2282575 2283714 . - . ID=gene-DOLE_RS09685;Name=DOLE_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09685;old_locus_tag=Dole_1884 NC_009943.1 Protein Homology CDS 2282575 2283714 . - 0 ID=cds-WP_041280487.1;Parent=gene-DOLE_RS09685;Dbxref=Genbank:WP_041280487.1;Name=WP_041280487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011189432.1;locus_tag=DOLE_RS09685;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_041280487.1;transl_table=11 NC_009943.1 RefSeq gene 2283714 2287262 . - . ID=gene-DOLE_RS09690;Name=DOLE_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09690;old_locus_tag=Dole_1885 NC_009943.1 Protein Homology CDS 2283714 2287262 . - 0 ID=cds-WP_012175301.1;Parent=gene-DOLE_RS09690;Dbxref=Genbank:WP_012175301.1;Name=WP_012175301.1;Ontology_term=GO:0006260,GO:0008408;gbkey=CDS;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875789.1;locus_tag=DOLE_RS09690;product=DNA polymerase III subunit alpha;protein_id=WP_012175301.1;transl_table=11 NC_009943.1 RefSeq gene 2287472 2288929 . - . ID=gene-DOLE_RS09695;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=DOLE_RS09695;old_locus_tag=Dole_1886 NC_009943.1 Protein Homology CDS 2287472 2288929 . - 0 ID=cds-WP_012175302.1;Parent=gene-DOLE_RS09695;Dbxref=Genbank:WP_012175302.1;Name=WP_012175302.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964832.1;locus_tag=DOLE_RS09695;product=IMP dehydrogenase;protein_id=WP_012175302.1;transl_table=11 NC_009943.1 RefSeq gene 2289261 2289869 . + . ID=gene-DOLE_RS09700;Name=DOLE_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09700;old_locus_tag=Dole_1888 NC_009943.1 Protein Homology CDS 2289261 2289869 . + 0 ID=cds-WP_012175304.1;Parent=gene-DOLE_RS09700;Dbxref=Genbank:WP_012175304.1;Name=WP_012175304.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904338.1;locus_tag=DOLE_RS09700;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_012175304.1;transl_table=11 NC_009943.1 RefSeq gene 2289894 2291504 . + . ID=gene-DOLE_RS09705;Name=DOLE_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09705;old_locus_tag=Dole_1889 NC_009943.1 Protein Homology CDS 2289894 2291504 . + 0 ID=cds-WP_083766575.1;Parent=gene-DOLE_RS09705;Dbxref=Genbank:WP_083766575.1;Name=WP_083766575.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013225.2;locus_tag=DOLE_RS09705;product=biotin carboxylase;protein_id=WP_083766575.1;transl_table=11 NC_009943.1 RefSeq gene 2291737 2293059 . + . ID=gene-DOLE_RS09710;Name=DOLE_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09710;old_locus_tag=Dole_1890 NC_009943.1 Protein Homology CDS 2291737 2293059 . + 0 ID=cds-WP_012175306.1;Parent=gene-DOLE_RS09710;Dbxref=Genbank:WP_012175306.1;Name=WP_012175306.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS09710;product=radical SAM protein;protein_id=WP_012175306.1;transl_table=11 NC_009943.1 RefSeq gene 2293207 2294754 . - . ID=gene-DOLE_RS18510;Name=DOLE_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18510;old_locus_tag=Dole_1891 NC_009943.1 Protein Homology CDS 2293207 2294754 . - 0 ID=cds-WP_208596975.1;Parent=gene-DOLE_RS18510;Dbxref=Genbank:WP_208596975.1;Name=WP_208596975.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: protein motif:HMM:NF019121.2;locus_tag=DOLE_RS18510;product=GNAT family N-acetyltransferase;protein_id=WP_208596975.1;transl_table=11 NC_009943.1 RefSeq gene 2294815 2295324 . - . ID=gene-DOLE_RS09720;Name=DOLE_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09720;old_locus_tag=Dole_1892 NC_009943.1 GeneMarkS-2+ CDS 2294815 2295324 . - 0 ID=cds-WP_012175308.1;Parent=gene-DOLE_RS09720;Dbxref=Genbank:WP_012175308.1;Name=WP_012175308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09720;product=hypothetical protein;protein_id=WP_012175308.1;transl_table=11 NC_009943.1 RefSeq gene 2295327 2296691 . - . ID=gene-DOLE_RS09725;Name=DOLE_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09725;old_locus_tag=Dole_1893 NC_009943.1 Protein Homology CDS 2295327 2296691 . - 0 ID=cds-WP_012175309.1;Parent=gene-DOLE_RS09725;Dbxref=Genbank:WP_012175309.1;Name=WP_012175309.1;Ontology_term=GO:0008152,GO:0016853,GO:0051539,GO:1904047;gbkey=CDS;go_function=isomerase activity|0016853||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876217.1;locus_tag=DOLE_RS09725;product=KamA family radical SAM protein;protein_id=WP_012175309.1;transl_table=11 NC_009943.1 RefSeq gene 2296907 2297596 . - . ID=gene-DOLE_RS09730;Name=DOLE_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09730;old_locus_tag=Dole_1894 NC_009943.1 GeneMarkS-2+ CDS 2296907 2297596 . - 0 ID=cds-WP_012175310.1;Parent=gene-DOLE_RS09730;Dbxref=Genbank:WP_012175310.1;Name=WP_012175310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09730;product=hypothetical protein;protein_id=WP_012175310.1;transl_table=11 NC_009943.1 RefSeq gene 2297964 2300060 . + . ID=gene-DOLE_RS09735;Name=DOLE_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09735;old_locus_tag=Dole_1895 NC_009943.1 Protein Homology CDS 2297964 2300060 . + 0 ID=cds-WP_012175311.1;Parent=gene-DOLE_RS09735;Dbxref=Genbank:WP_012175311.1;Name=WP_012175311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006194.0;locus_tag=DOLE_RS09735;product=bifunctional aldolase/short-chain dehydrogenase;protein_id=WP_012175311.1;transl_table=11 NC_009943.1 RefSeq gene 2300069 2300452 . + . ID=gene-DOLE_RS09740;Name=DOLE_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09740;old_locus_tag=Dole_1896 NC_009943.1 Protein Homology CDS 2300069 2300452 . + 0 ID=cds-WP_012175312.1;Parent=gene-DOLE_RS09740;Dbxref=Genbank:WP_012175312.1;Name=WP_012175312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013098.2;locus_tag=DOLE_RS09740;product=VOC family protein;protein_id=WP_012175312.1;transl_table=11 NC_009943.1 RefSeq gene 2300467 2301351 . + . ID=gene-DOLE_RS09745;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=DOLE_RS09745;old_locus_tag=Dole_1897 NC_009943.1 Protein Homology CDS 2300467 2301351 . + 0 ID=cds-WP_012175313.1;Parent=gene-DOLE_RS09745;Dbxref=Genbank:WP_012175313.1;Name=WP_012175313.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: protein motif:HMM:NF006081.0;locus_tag=DOLE_RS09745;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_012175313.1;transl_table=11 NC_009943.1 RefSeq gene 2301752 2301937 . + . ID=gene-DOLE_RS09750;Name=DOLE_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09750;old_locus_tag=Dole_1898 NC_009943.1 Protein Homology CDS 2301752 2301937 . + 0 ID=cds-WP_012175314.1;Parent=gene-DOLE_RS09750;Dbxref=Genbank:WP_012175314.1;Name=WP_012175314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609659.1;locus_tag=DOLE_RS09750;product=hypothetical protein;protein_id=WP_012175314.1;transl_table=11 NC_009943.1 RefSeq gene 2302880 2304151 . - . ID=gene-DOLE_RS17395;Name=DOLE_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17395;old_locus_tag=Dole_1899 NC_009943.1 Protein Homology CDS 2302880 2304151 . - 0 ID=cds-WP_012175315.1;Parent=gene-DOLE_RS17395;Dbxref=Genbank:WP_012175315.1;Name=WP_012175315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=DOLE_RS17395;product=RHS repeat-associated core domain-containing protein;protein_id=WP_012175315.1;transl_table=11 NC_009943.1 RefSeq gene 2304331 2306100 . - . ID=gene-DOLE_RS09760;Name=DOLE_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09760;old_locus_tag=Dole_1900 NC_009943.1 Protein Homology CDS 2304331 2306100 . - 0 ID=cds-WP_012175316.1;Parent=gene-DOLE_RS09760;Dbxref=Genbank:WP_012175316.1;Name=WP_012175316.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF014081.2;locus_tag=DOLE_RS09760;product=amidohydrolase family protein;protein_id=WP_012175316.1;transl_table=11 NC_009943.1 RefSeq gene 2306382 2306618 . + . ID=gene-DOLE_RS17960;Name=DOLE_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17960;old_locus_tag=Dole_1901 NC_009943.1 Protein Homology CDS 2306382 2306618 . + 0 ID=cds-WP_012175317.1;Parent=gene-DOLE_RS17960;Dbxref=Genbank:WP_012175317.1;Name=WP_012175317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877172.1;locus_tag=DOLE_RS17960;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_012175317.1;transl_table=11 NC_009943.1 RefSeq gene 2306602 2307015 . + . ID=gene-DOLE_RS17965;Name=DOLE_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17965;old_locus_tag=Dole_1902 NC_009943.1 Protein Homology CDS 2306602 2307015 . + 0 ID=cds-WP_012175318.1;Parent=gene-DOLE_RS17965;Dbxref=Genbank:WP_012175318.1;Name=WP_012175318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877173.1;locus_tag=DOLE_RS17965;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012175318.1;transl_table=11 NC_009943.1 RefSeq gene 2307144 2307992 . + . ID=gene-DOLE_RS17400;Name=DOLE_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17400;old_locus_tag=Dole_1903 NC_009943.1 Protein Homology CDS 2307144 2307992 . + 0 ID=cds-WP_012175319.1;Parent=gene-DOLE_RS17400;Dbxref=Genbank:WP_012175319.1;Name=WP_012175319.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=DOLE_RS17400;product=methyltransferase domain-containing protein;protein_id=WP_012175319.1;transl_table=11 NC_009943.1 RefSeq gene 2308147 2308452 . + . ID=gene-DOLE_RS18515;Name=DOLE_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18515;old_locus_tag=Dole_1904 NC_009943.1 GeneMarkS-2+ CDS 2308147 2308452 . + 0 ID=cds-WP_012175320.1;Parent=gene-DOLE_RS18515;Dbxref=Genbank:WP_012175320.1;Name=WP_012175320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18515;product=hypothetical protein;protein_id=WP_012175320.1;transl_table=11 NC_009943.1 RefSeq gene 2308491 2309030 . - . ID=gene-DOLE_RS09775;Name=DOLE_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09775;old_locus_tag=Dole_1905 NC_009943.1 Protein Homology CDS 2308491 2309030 . - 0 ID=cds-WP_012175321.1;Parent=gene-DOLE_RS09775;Dbxref=Genbank:WP_012175321.1;Name=WP_012175321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876668.1;locus_tag=DOLE_RS09775;product=NUDIX hydrolase;protein_id=WP_012175321.1;transl_table=11 NC_009943.1 RefSeq gene 2309027 2309839 . - . ID=gene-DOLE_RS09780;Name=DOLE_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09780;old_locus_tag=Dole_1906 NC_009943.1 Protein Homology CDS 2309027 2309839 . - 0 ID=cds-WP_012175322.1;Parent=gene-DOLE_RS09780;Dbxref=Genbank:WP_012175322.1;Name=WP_012175322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876824.1;locus_tag=DOLE_RS09780;product=carbon-nitrogen family hydrolase;protein_id=WP_012175322.1;transl_table=11 NC_009943.1 RefSeq gene 2309943 2310782 . - . ID=gene-DOLE_RS09785;Name=DOLE_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09785;old_locus_tag=Dole_1907 NC_009943.1 Protein Homology CDS 2309943 2310782 . - 0 ID=cds-WP_012175323.1;Parent=gene-DOLE_RS09785;Dbxref=Genbank:WP_012175323.1;Name=WP_012175323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012383.2;locus_tag=DOLE_RS09785;product=ComF family protein;protein_id=WP_012175323.1;transl_table=11 NC_009943.1 RefSeq gene 2310787 2312028 . - . ID=gene-DOLE_RS09790;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=DOLE_RS09790;old_locus_tag=Dole_1908 NC_009943.1 Protein Homology CDS 2310787 2312028 . - 0 ID=cds-WP_012175324.1;Parent=gene-DOLE_RS09790;Dbxref=Genbank:WP_012175324.1;Name=WP_012175324.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;gene=icd;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903736.1;locus_tag=DOLE_RS09790;product=isocitrate dehydrogenase (NADP(+));protein_id=WP_012175324.1;transl_table=11 NC_009943.1 RefSeq gene 2312343 2313113 . - . ID=gene-DOLE_RS09795;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=DOLE_RS09795;old_locus_tag=Dole_1909 NC_009943.1 Protein Homology CDS 2312343 2313113 . - 0 ID=cds-WP_012175325.1;Parent=gene-DOLE_RS09795;Dbxref=Genbank:WP_012175325.1;Name=WP_012175325.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: protein motif:HMM:TIGR00186.1;locus_tag=DOLE_RS09795;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_012175325.1;transl_table=11 NC_009943.1 RefSeq gene 2313110 2313742 . - . ID=gene-DOLE_RS09800;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=DOLE_RS09800;old_locus_tag=Dole_1910 NC_009943.1 Protein Homology CDS 2313110 2313742 . - 0 ID=cds-WP_012175326.1;Parent=gene-DOLE_RS09800;Dbxref=Genbank:WP_012175326.1;Name=WP_012175326.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876827.1;locus_tag=DOLE_RS09800;product=guanylate kinase;protein_id=WP_012175326.1;transl_table=11 NC_009943.1 RefSeq gene 2313755 2314048 . - . ID=gene-DOLE_RS09805;Name=DOLE_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09805;old_locus_tag=Dole_1911 NC_009943.1 Protein Homology CDS 2313755 2314048 . - 0 ID=cds-WP_012175327.1;Parent=gene-DOLE_RS09805;Dbxref=Genbank:WP_012175327.1;Name=WP_012175327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175327.1;locus_tag=DOLE_RS09805;product=DUF370 domain-containing protein;protein_id=WP_012175327.1;transl_table=11 NC_009943.1 RefSeq gene 2314223 2315107 . - . ID=gene-DOLE_RS09810;Name=DOLE_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09810;old_locus_tag=Dole_1912 NC_009943.1 Protein Homology CDS 2314223 2315107 . - 0 ID=cds-WP_012175328.1;Parent=gene-DOLE_RS09810;Dbxref=Genbank:WP_012175328.1;Name=WP_012175328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00255.1;locus_tag=DOLE_RS09810;product=YicC family protein;protein_id=WP_012175328.1;transl_table=11 NC_009943.1 RefSeq gene 2315263 2315802 . - . ID=gene-DOLE_RS09815;Name=DOLE_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09815;old_locus_tag=Dole_1913 NC_009943.1 Protein Homology CDS 2315263 2315802 . - 0 ID=cds-WP_012175329.1;Parent=gene-DOLE_RS09815;Dbxref=Genbank:WP_012175329.1;Name=WP_012175329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073670.1;locus_tag=DOLE_RS09815;product=DUF4416 family protein;protein_id=WP_012175329.1;transl_table=11 NC_009943.1 RefSeq gene 2315811 2315987 . - . ID=gene-DOLE_RS17970;Name=DOLE_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17970;old_locus_tag=Dole_1914 NC_009943.1 Protein Homology CDS 2315811 2315987 . - 0 ID=cds-WP_012175330.1;Parent=gene-DOLE_RS17970;Dbxref=Genbank:WP_012175330.1;Name=WP_012175330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589764.1;locus_tag=DOLE_RS17970;product=Trm112 family protein;protein_id=WP_012175330.1;transl_table=11 NC_009943.1 RefSeq gene 2316229 2317041 . - . ID=gene-DOLE_RS09820;Name=DOLE_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09820;old_locus_tag=Dole_1915 NC_009943.1 Protein Homology CDS 2316229 2317041 . - 0 ID=cds-WP_012175331.1;Parent=gene-DOLE_RS09820;Dbxref=Genbank:WP_012175331.1;Name=WP_012175331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948499.1;locus_tag=DOLE_RS09820;product=DUF3786 domain-containing protein;protein_id=WP_012175331.1;transl_table=11 NC_009943.1 RefSeq gene 2317324 2318394 . - . ID=gene-DOLE_RS09825;Name=DOLE_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09825;old_locus_tag=Dole_1916 NC_009943.1 GeneMarkS-2+ CDS 2317324 2318394 . - 0 ID=cds-WP_012175332.1;Parent=gene-DOLE_RS09825;Dbxref=Genbank:WP_012175332.1;Name=WP_012175332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09825;product=hypothetical protein;protein_id=WP_012175332.1;transl_table=11 NC_009943.1 RefSeq gene 2318421 2319248 . - . ID=gene-DOLE_RS09830;Name=DOLE_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09830;old_locus_tag=Dole_1917 NC_009943.1 Protein Homology CDS 2318421 2319248 . - 0 ID=cds-WP_012175333.1;Parent=gene-DOLE_RS09830;Dbxref=Genbank:WP_012175333.1;Name=WP_012175333.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF004196.0;locus_tag=DOLE_RS09830;product=SDR family oxidoreductase;protein_id=WP_012175333.1;transl_table=11 NC_009943.1 RefSeq gene 2319245 2320003 . - . ID=gene-DOLE_RS09835;Name=DOLE_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09835;old_locus_tag=Dole_1918 NC_009943.1 Protein Homology CDS 2319245 2320003 . - 0 ID=cds-WP_012175334.1;Parent=gene-DOLE_RS09835;Dbxref=Genbank:WP_012175334.1;Name=WP_012175334.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662676.1;locus_tag=DOLE_RS09835;product=SDR family oxidoreductase;protein_id=WP_012175334.1;transl_table=11 NC_009943.1 RefSeq gene 2320189 2321067 . - . ID=gene-DOLE_RS09840;Name=DOLE_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09840;old_locus_tag=Dole_1919 NC_009943.1 Protein Homology CDS 2320189 2321067 . - 0 ID=cds-WP_012175335.1;Parent=gene-DOLE_RS09840;Dbxref=Genbank:WP_012175335.1;Name=WP_012175335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016777.2;locus_tag=DOLE_RS09840;product=amidohydrolase family protein;protein_id=WP_012175335.1;transl_table=11 NC_009943.1 RefSeq gene 2321203 2321883 . - . ID=gene-DOLE_RS09845;Name=DOLE_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09845;old_locus_tag=Dole_1920 NC_009943.1 Protein Homology CDS 2321203 2321883 . - 0 ID=cds-WP_041280488.1;Parent=gene-DOLE_RS09845;Dbxref=Genbank:WP_041280488.1;Name=WP_041280488.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036525.2;locus_tag=DOLE_RS09845;product=TetR/AcrR family transcriptional regulator;protein_id=WP_041280488.1;transl_table=11 NC_009943.1 RefSeq gene 2321973 2323175 . - . ID=gene-DOLE_RS09850;Name=DOLE_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09850;old_locus_tag=Dole_1921 NC_009943.1 Protein Homology CDS 2321973 2323175 . - 0 ID=cds-WP_012175337.1;Parent=gene-DOLE_RS09850;Dbxref=Genbank:WP_012175337.1;Name=WP_012175337.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662672.1;locus_tag=DOLE_RS09850;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012175337.1;transl_table=11 NC_009943.1 RefSeq gene 2323381 2324091 . - . ID=gene-DOLE_RS09855;Name=DOLE_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09855;old_locus_tag=Dole_1922 NC_009943.1 Protein Homology CDS 2323381 2324091 . - 0 ID=cds-WP_012175338.1;Parent=gene-DOLE_RS09855;Dbxref=Genbank:WP_012175338.1;Name=WP_012175338.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=DOLE_RS09855;product=histidine phosphatase family protein;protein_id=WP_012175338.1;transl_table=11 NC_009943.1 RefSeq gene 2324372 2325148 . + . ID=gene-DOLE_RS09860;Name=DOLE_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09860;old_locus_tag=Dole_1923 NC_009943.1 Protein Homology CDS 2324372 2325148 . + 0 ID=cds-WP_012175339.1;Parent=gene-DOLE_RS09860;Dbxref=Genbank:WP_012175339.1;Name=WP_012175339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013200.2;locus_tag=DOLE_RS09860;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_012175339.1;transl_table=11 NC_009943.1 RefSeq gene 2325157 2326140 . + . ID=gene-DOLE_RS17405;Name=DOLE_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17405;old_locus_tag=Dole_1924 NC_009943.1 Protein Homology CDS 2325157 2326140 . + 0 ID=cds-WP_012175340.1;Parent=gene-DOLE_RS17405;Dbxref=Genbank:WP_012175340.1;Name=WP_012175340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013200.2;locus_tag=DOLE_RS17405;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_012175340.1;transl_table=11 NC_009943.1 RefSeq gene 2326522 2327358 . + . ID=gene-DOLE_RS09870;Name=DOLE_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09870;old_locus_tag=Dole_1925 NC_009943.1 Protein Homology CDS 2326522 2327358 . + 0 ID=cds-WP_012175341.1;Parent=gene-DOLE_RS09870;Dbxref=Genbank:WP_012175341.1;Name=WP_012175341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610562.1;locus_tag=DOLE_RS09870;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_012175341.1;transl_table=11 NC_009943.1 RefSeq gene 2327503 2328399 . + . ID=gene-DOLE_RS09875;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=DOLE_RS09875;old_locus_tag=Dole_1926 NC_009943.1 Protein Homology CDS 2327503 2328399 . + 0 ID=cds-WP_041281045.1;Parent=gene-DOLE_RS09875;Dbxref=Genbank:WP_041281045.1;Name=WP_041281045.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876581.1;locus_tag=DOLE_RS09875;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_041281045.1;transl_table=11 NC_009943.1 RefSeq gene 2328409 2329293 . + . ID=gene-DOLE_RS09880;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=DOLE_RS09880;old_locus_tag=Dole_1927 NC_009943.1 Protein Homology CDS 2328409 2329293 . + 0 ID=cds-WP_012175343.1;Parent=gene-DOLE_RS09880;Dbxref=Genbank:WP_012175343.1;Name=WP_012175343.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958594.1;locus_tag=DOLE_RS09880;product=phosphate ABC transporter permease PstA;protein_id=WP_012175343.1;transl_table=11 NC_009943.1 RefSeq gene 2329307 2330062 . + . ID=gene-DOLE_RS09885;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=DOLE_RS09885;old_locus_tag=Dole_1928 NC_009943.1 Protein Homology CDS 2329307 2330062 . + 0 ID=cds-WP_012175344.1;Parent=gene-DOLE_RS09885;Dbxref=Genbank:WP_012175344.1;Name=WP_012175344.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876579.1;locus_tag=DOLE_RS09885;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_012175344.1;transl_table=11 NC_009943.1 RefSeq gene 2330249 2330929 . + . ID=gene-DOLE_RS09890;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=DOLE_RS09890;old_locus_tag=Dole_1929 NC_009943.1 Protein Homology CDS 2330249 2330929 . + 0 ID=cds-WP_012175345.1;Parent=gene-DOLE_RS09890;Dbxref=Genbank:WP_012175345.1;Name=WP_012175345.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876578.1;locus_tag=DOLE_RS09890;product=phosphate signaling complex protein PhoU;protein_id=WP_012175345.1;transl_table=11 NC_009943.1 RefSeq gene 2330942 2331643 . + . ID=gene-DOLE_RS09895;Name=DOLE_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09895;old_locus_tag=Dole_1930 NC_009943.1 Protein Homology CDS 2330942 2331643 . + 0 ID=cds-WP_012175346.1;Parent=gene-DOLE_RS09895;Dbxref=Genbank:WP_012175346.1;Name=WP_012175346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011189126.1;locus_tag=DOLE_RS09895;product=response regulator transcription factor;protein_id=WP_012175346.1;transl_table=11 NC_009943.1 RefSeq gene 2331844 2333619 . + . ID=gene-DOLE_RS09900;Name=DOLE_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09900;old_locus_tag=Dole_1931 NC_009943.1 Protein Homology CDS 2331844 2333619 . + 0 ID=cds-WP_012175347.1;Parent=gene-DOLE_RS09900;Dbxref=Genbank:WP_012175347.1;Name=WP_012175347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS09900;product=ATP-binding protein;protein_id=WP_012175347.1;transl_table=11 NC_009943.1 RefSeq gene 2333835 2336036 . + . ID=gene-DOLE_RS09905;Name=DOLE_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09905;old_locus_tag=Dole_1932 NC_009943.1 Protein Homology CDS 2333835 2336036 . + 0 ID=cds-WP_012175348.1;Parent=gene-DOLE_RS09905;Dbxref=Genbank:WP_012175348.1;Name=WP_012175348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023568.2;locus_tag=DOLE_RS09905;product=alpha/beta fold hydrolase;protein_id=WP_012175348.1;transl_table=11 NC_009943.1 RefSeq gene 2336052 2336762 . - . ID=gene-DOLE_RS09910;Name=DOLE_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09910;old_locus_tag=Dole_1933 NC_009943.1 Protein Homology CDS 2336052 2336762 . - 0 ID=cds-WP_012175349.1;Parent=gene-DOLE_RS09910;Dbxref=Genbank:WP_012175349.1;Name=WP_012175349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024872.2;locus_tag=DOLE_RS09910;product=AAA family ATPase;protein_id=WP_012175349.1;transl_table=11 NC_009943.1 RefSeq gene 2336764 2338845 . - . ID=gene-DOLE_RS09915;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=DOLE_RS09915;old_locus_tag=Dole_1934 NC_009943.1 Protein Homology CDS 2336764 2338845 . - 0 ID=cds-WP_012175350.1;Parent=gene-DOLE_RS09915;Dbxref=Genbank:WP_012175350.1;Name=WP_012175350.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904346.1;locus_tag=DOLE_RS09915;product=elongation factor G;protein_id=WP_012175350.1;transl_table=11 NC_009943.1 RefSeq gene 2339034 2339462 . - . ID=gene-DOLE_RS09920;Name=DOLE_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09920;old_locus_tag=Dole_1935 NC_009943.1 Protein Homology CDS 2339034 2339462 . - 0 ID=cds-WP_012175351.1;Parent=gene-DOLE_RS09920;Dbxref=Genbank:WP_012175351.1;Name=WP_012175351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725558.1;locus_tag=DOLE_RS09920;product=NUDIX hydrolase;protein_id=WP_012175351.1;transl_table=11 NC_009943.1 RefSeq gene 2339465 2340580 . - . ID=gene-DOLE_RS09925;Name=DOLE_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09925;old_locus_tag=Dole_1936 NC_009943.1 Protein Homology CDS 2339465 2340580 . - 0 ID=cds-WP_012175352.1;Parent=gene-DOLE_RS09925;Dbxref=Genbank:WP_012175352.1;Name=WP_012175352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877548.1;locus_tag=DOLE_RS09925;product=radical SAM protein;protein_id=WP_012175352.1;transl_table=11 NC_009943.1 RefSeq gene 2340666 2341304 . + . ID=gene-DOLE_RS09930;Name=DOLE_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09930;old_locus_tag=Dole_1937 NC_009943.1 Protein Homology CDS 2340666 2341304 . + 0 ID=cds-WP_012175353.1;Parent=gene-DOLE_RS09930;Dbxref=Genbank:WP_012175353.1;Name=WP_012175353.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS09930;product=MBL fold metallo-hydrolase;protein_id=WP_012175353.1;transl_table=11 NC_009943.1 RefSeq gene 2341462 2342196 . + . ID=gene-DOLE_RS09935;Name=DOLE_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09935;old_locus_tag=Dole_1938 NC_009943.1 Protein Homology CDS 2341462 2342196 . + 0 ID=cds-WP_012175354.1;Parent=gene-DOLE_RS09935;Dbxref=Genbank:WP_012175354.1;Name=WP_012175354.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS09935;product=response regulator;protein_id=WP_012175354.1;transl_table=11 NC_009943.1 RefSeq gene 2342548 2343321 . - . ID=gene-DOLE_RS17410;Name=DOLE_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17410;old_locus_tag=Dole_1939 NC_009943.1 Protein Homology CDS 2342548 2343321 . - 0 ID=cds-WP_012175355.1;Parent=gene-DOLE_RS17410;Dbxref=Genbank:WP_012175355.1;Name=WP_012175355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175358.1;locus_tag=DOLE_RS17410;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175355.1;transl_table=11 NC_009943.1 RefSeq gene 2343735 2345303 . + . ID=gene-DOLE_RS09950;Name=DOLE_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09950;old_locus_tag=Dole_1940 NC_009943.1 Protein Homology CDS 2343735 2345303 . + 0 ID=cds-WP_012175356.1;Parent=gene-DOLE_RS09950;Dbxref=Genbank:WP_012175356.1;Name=WP_012175356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025030.2;locus_tag=DOLE_RS09950;product=HEAT repeat domain-containing protein;protein_id=WP_012175356.1;transl_table=11 NC_009943.1 RefSeq gene 2345450 2347726 . + . ID=gene-DOLE_RS09955;Name=DOLE_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09955;old_locus_tag=Dole_1941 NC_009943.1 Protein Homology CDS 2345450 2347726 . + 0 ID=cds-WP_012175357.1;Parent=gene-DOLE_RS09955;Dbxref=Genbank:WP_012175357.1;Name=WP_012175357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175173.1;locus_tag=DOLE_RS09955;product=VCBS repeat-containing protein;protein_id=WP_012175357.1;transl_table=11 NC_009943.1 RefSeq gene 2347844 2348605 . - . ID=gene-DOLE_RS17415;Name=DOLE_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17415;old_locus_tag=Dole_1942 NC_009943.1 Protein Homology CDS 2347844 2348605 . - 0 ID=cds-WP_012175358.1;Parent=gene-DOLE_RS17415;Dbxref=Genbank:WP_012175358.1;Name=WP_012175358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175355.1;locus_tag=DOLE_RS17415;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175358.1;transl_table=11 NC_009943.1 RefSeq gene 2349075 2353184 . + . ID=gene-DOLE_RS09965;Name=DOLE_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09965;old_locus_tag=Dole_1943 NC_009943.1 GeneMarkS-2+ CDS 2349075 2353184 . + 0 ID=cds-WP_012175359.1;Parent=gene-DOLE_RS09965;Dbxref=Genbank:WP_012175359.1;Name=WP_012175359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS09965;product=hypothetical protein;protein_id=WP_012175359.1;transl_table=11 NC_009943.1 RefSeq gene 2353318 2354613 . + . ID=gene-DOLE_RS09970;Name=DOLE_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09970;old_locus_tag=Dole_1944 NC_009943.1 Protein Homology CDS 2353318 2354613 . + 0 ID=cds-WP_167320872.1;Parent=gene-DOLE_RS09970;Dbxref=Genbank:WP_167320872.1;Name=WP_167320872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015316.2;locus_tag=DOLE_RS09970;product=outer membrane protein transport protein;protein_id=WP_167320872.1;transl_table=11 NC_009943.1 RefSeq gene 2354653 2355018 . + . ID=gene-DOLE_RS09975;Name=DOLE_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09975 NC_009943.1 Protein Homology CDS 2354653 2355018 . + 0 ID=cds-WP_041280491.1;Parent=gene-DOLE_RS09975;Dbxref=Genbank:WP_041280491.1;Name=WP_041280491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS09975;product=PilZ domain-containing protein;protein_id=WP_041280491.1;transl_table=11 NC_009943.1 RefSeq gene 2355144 2355698 . + . ID=gene-DOLE_RS17975;Name=DOLE_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17975;old_locus_tag=Dole_1945 NC_009943.1 Protein Homology CDS 2355144 2355698 . + 0 ID=cds-WP_083766578.1;Parent=gene-DOLE_RS17975;Dbxref=Genbank:WP_083766578.1;Name=WP_083766578.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022607.2;locus_tag=DOLE_RS17975;product=DUF2939 domain-containing protein;protein_id=WP_083766578.1;transl_table=11 NC_009943.1 RefSeq gene 2355739 2356047 . + . ID=gene-DOLE_RS18215;Name=DOLE_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18215 NC_009943.1 GeneMarkS-2+ CDS 2355739 2356047 . + 0 ID=cds-WP_153304408.1;Parent=gene-DOLE_RS18215;Dbxref=Genbank:WP_153304408.1;Name=WP_153304408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18215;product=hypothetical protein;protein_id=WP_153304408.1;transl_table=11 NC_009943.1 RefSeq gene 2356063 2356902 . - . ID=gene-DOLE_RS09985;Name=DOLE_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09985;old_locus_tag=Dole_1946 NC_009943.1 Protein Homology CDS 2356063 2356902 . - 0 ID=cds-WP_012175362.1;Parent=gene-DOLE_RS09985;Dbxref=Genbank:WP_012175362.1;Name=WP_012175362.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: protein motif:HMM:NF014234.2;locus_tag=DOLE_RS09985;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=WP_012175362.1;transl_table=11 NC_009943.1 RefSeq gene 2356890 2357954 . - . ID=gene-DOLE_RS09990;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=DOLE_RS09990;old_locus_tag=Dole_1947 NC_009943.1 Protein Homology CDS 2356890 2357954 . - 0 ID=cds-WP_012175363.1;Parent=gene-DOLE_RS09990;Dbxref=Genbank:WP_012175363.1;Name=WP_012175363.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175363.1;locus_tag=DOLE_RS09990;product=chorismate synthase;protein_id=WP_012175363.1;transl_table=11 NC_009943.1 RefSeq gene 2358243 2358671 . - . ID=gene-DOLE_RS09995;Name=DOLE_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS09995;old_locus_tag=Dole_1948 NC_009943.1 Protein Homology CDS 2358243 2358671 . - 0 ID=cds-WP_012175364.1;Parent=gene-DOLE_RS09995;Dbxref=Genbank:WP_012175364.1;Name=WP_012175364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013375.2;locus_tag=DOLE_RS09995;product=hypothetical protein;protein_id=WP_012175364.1;transl_table=11 NC_009943.1 RefSeq gene 2358751 2360022 . - . ID=gene-DOLE_RS10000;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=DOLE_RS10000;old_locus_tag=Dole_1949 NC_009943.1 Protein Homology CDS 2358751 2360022 . - 0 ID=cds-WP_012175365.1;Parent=gene-DOLE_RS10000;Dbxref=Genbank:WP_012175365.1;Name=WP_012175365.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904117.1;locus_tag=DOLE_RS10000;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_012175365.1;transl_table=11 NC_009943.1 RefSeq gene 2360036 2361136 . - . ID=gene-DOLE_RS10005;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=DOLE_RS10005;old_locus_tag=Dole_1950 NC_009943.1 Protein Homology CDS 2360036 2361136 . - 0 ID=cds-WP_012175366.1;Parent=gene-DOLE_RS10005;Dbxref=Genbank:WP_012175366.1;Name=WP_012175366.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878157.1;locus_tag=DOLE_RS10005;product=prephenate dehydratase;protein_id=WP_012175366.1;transl_table=11 NC_009943.1 RefSeq gene 2361150 2362142 . - . ID=gene-DOLE_RS10010;Name=DOLE_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10010;old_locus_tag=Dole_1951 NC_009943.1 Protein Homology CDS 2361150 2362142 . - 0 ID=cds-WP_012175367.1;Parent=gene-DOLE_RS10010;Dbxref=Genbank:WP_012175367.1;Name=WP_012175367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610890.1;locus_tag=DOLE_RS10010;product=3-dehydroquinate synthase II;protein_id=WP_012175367.1;transl_table=11 NC_009943.1 RefSeq gene 2362160 2362972 . - . ID=gene-DOLE_RS10015;Name=DOLE_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10015;old_locus_tag=Dole_1952 NC_009943.1 Protein Homology CDS 2362160 2362972 . - 0 ID=cds-WP_012175368.1;Parent=gene-DOLE_RS10015;Dbxref=Genbank:WP_012175368.1;Name=WP_012175368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176600.1;locus_tag=DOLE_RS10015;product=2-amino-3%2C7-dideoxy-D-threo-hept-6-ulosonate synthase;protein_id=WP_012175368.1;transl_table=11 NC_009943.1 RefSeq gene 2363496 2366375 . - . ID=gene-DOLE_RS10020;Name=DOLE_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10020;old_locus_tag=Dole_1953 NC_009943.1 Protein Homology CDS 2363496 2366375 . - 0 ID=cds-WP_012175369.1;Parent=gene-DOLE_RS10020;Dbxref=Genbank:WP_012175369.1;Name=WP_012175369.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965399.1;locus_tag=DOLE_RS10020;product=DEAD/DEAH box helicase;protein_id=WP_012175369.1;transl_table=11 NC_009943.1 RefSeq gene 2366482 2366694 . + . ID=gene-DOLE_RS10025;Name=DOLE_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10025;old_locus_tag=Dole_1954 NC_009943.1 GeneMarkS-2+ CDS 2366482 2366694 . + 0 ID=cds-WP_012175370.1;Parent=gene-DOLE_RS10025;Dbxref=Genbank:WP_012175370.1;Name=WP_012175370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10025;product=hypothetical protein;protein_id=WP_012175370.1;transl_table=11 NC_009943.1 RefSeq gene 2366891 2367496 . + . ID=gene-DOLE_RS10030;Name=DOLE_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10030;old_locus_tag=Dole_1955 NC_009943.1 Protein Homology CDS 2366891 2367496 . + 0 ID=cds-WP_012175371.1;Parent=gene-DOLE_RS10030;Dbxref=Genbank:WP_012175371.1;Name=WP_012175371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019081.2;locus_tag=DOLE_RS10030;product=YfaZ family outer membrane protein;protein_id=WP_012175371.1;transl_table=11 NC_009943.1 RefSeq gene 2367740 2368600 . - . ID=gene-DOLE_RS10035;Name=DOLE_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10035;old_locus_tag=Dole_1956 NC_009943.1 Protein Homology CDS 2367740 2368600 . - 0 ID=cds-WP_012175372.1;Parent=gene-DOLE_RS10035;Dbxref=Genbank:WP_012175372.1;Name=WP_012175372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904261.1;locus_tag=DOLE_RS10035;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_012175372.1;transl_table=11 NC_009943.1 RefSeq gene 2368631 2369047 . - . ID=gene-DOLE_RS10040;Name=DOLE_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10040;old_locus_tag=Dole_1957 NC_009943.1 Protein Homology CDS 2368631 2369047 . - 0 ID=cds-WP_012175373.1;Parent=gene-DOLE_RS10040;Dbxref=Genbank:WP_012175373.1;Name=WP_012175373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175373.1;locus_tag=DOLE_RS10040;product=DUF134 domain-containing protein;protein_id=WP_012175373.1;transl_table=11 NC_009943.1 RefSeq gene 2369216 2369929 . - . ID=gene-DOLE_RS10045;Name=DOLE_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10045;old_locus_tag=Dole_1958 NC_009943.1 Protein Homology CDS 2369216 2369929 . - 0 ID=cds-WP_012175374.1;Parent=gene-DOLE_RS10045;Dbxref=Genbank:WP_012175374.1;Name=WP_012175374.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905693.1;locus_tag=DOLE_RS10045;product=enoyl-CoA hydratase;protein_id=WP_012175374.1;transl_table=11 NC_009943.1 RefSeq gene 2370322 2371098 . + . ID=gene-DOLE_RS10050;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=DOLE_RS10050;old_locus_tag=Dole_1959 NC_009943.1 Protein Homology CDS 2370322 2371098 . + 0 ID=cds-WP_012175375.1;Parent=gene-DOLE_RS10050;Dbxref=Genbank:WP_012175375.1;Name=WP_012175375.1;Ontology_term=GO:0009103,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074944.1;locus_tag=DOLE_RS10050;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_012175375.1;transl_table=11 NC_009943.1 RefSeq gene 2371080 2372183 . + . ID=gene-DOLE_RS10055;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=DOLE_RS10055;old_locus_tag=Dole_1960 NC_009943.1 Protein Homology CDS 2371080 2372183 . + 0 ID=cds-WP_041280493.1;Parent=gene-DOLE_RS10055;Dbxref=Genbank:WP_041280493.1;Name=WP_041280493.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: protein motif:HMM:TIGR02622.1;locus_tag=DOLE_RS10055;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_041280493.1;transl_table=11 NC_009943.1 RefSeq gene 2372171 2372746 . + . ID=gene-DOLE_RS10060;Name=DOLE_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10060;old_locus_tag=Dole_1961 NC_009943.1 Protein Homology CDS 2372171 2372746 . + 0 ID=cds-WP_012175377.1;Parent=gene-DOLE_RS10060;Dbxref=Genbank:WP_012175377.1;Name=WP_012175377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013103.2;locus_tag=DOLE_RS10060;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_012175377.1;transl_table=11 NC_009943.1 RefSeq gene 2372743 2373966 . + . ID=gene-DOLE_RS10065;Name=DOLE_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10065;old_locus_tag=Dole_1962 NC_009943.1 Protein Homology CDS 2372743 2373966 . + 0 ID=cds-WP_012175378.1;Parent=gene-DOLE_RS10065;Dbxref=Genbank:WP_012175378.1;Name=WP_012175378.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020073.2;locus_tag=DOLE_RS10065;product=class I SAM-dependent methyltransferase;protein_id=WP_012175378.1;transl_table=11 NC_009943.1 RefSeq gene 2373963 2374814 . + . ID=gene-DOLE_RS10070;Name=DOLE_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10070;old_locus_tag=Dole_1963 NC_009943.1 Protein Homology CDS 2373963 2374814 . + 0 ID=cds-WP_012175379.1;Parent=gene-DOLE_RS10070;Dbxref=Genbank:WP_012175379.1;Name=WP_012175379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=DOLE_RS10070;product=NAD(P)-dependent oxidoreductase;protein_id=WP_012175379.1;transl_table=11 NC_009943.1 RefSeq gene 2374903 2375862 . + . ID=gene-DOLE_RS10075;Name=DOLE_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10075;old_locus_tag=Dole_1964 NC_009943.1 Protein Homology CDS 2374903 2375862 . + 0 ID=cds-WP_208596978.1;Parent=gene-DOLE_RS10075;Dbxref=Genbank:WP_208596978.1;Name=WP_208596978.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=DOLE_RS10075;product=class I SAM-dependent methyltransferase;protein_id=WP_208596978.1;transl_table=11 NC_009943.1 RefSeq gene 2375910 2376692 . + . ID=gene-DOLE_RS10080;Name=DOLE_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10080;old_locus_tag=Dole_1965 NC_009943.1 Protein Homology CDS 2375910 2376692 . + 0 ID=cds-WP_012175381.1;Parent=gene-DOLE_RS10080;Dbxref=Genbank:WP_012175381.1;Name=WP_012175381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016850.2;locus_tag=DOLE_RS10080;product=cephalosporin hydroxylase family protein;protein_id=WP_012175381.1;transl_table=11 NC_009943.1 RefSeq gene 2376697 2378220 . + . ID=gene-DOLE_RS10085;Name=DOLE_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10085;old_locus_tag=Dole_1966 NC_009943.1 Protein Homology CDS 2376697 2378220 . + 0 ID=cds-WP_012175382.1;Parent=gene-DOLE_RS10085;Dbxref=Genbank:WP_012175382.1;Name=WP_012175382.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF024832.2;locus_tag=DOLE_RS10085;product=oligosaccharide flippase family protein;protein_id=WP_012175382.1;transl_table=11 NC_009943.1 RefSeq gene 2378263 2379165 . + . ID=gene-DOLE_RS17420;Name=DOLE_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17420;old_locus_tag=Dole_1967 NC_009943.1 Protein Homology CDS 2378263 2379165 . + 0 ID=cds-WP_012175383.1;Parent=gene-DOLE_RS17420;Dbxref=Genbank:WP_012175383.1;Name=WP_012175383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS17420;product=glycosyltransferase family 2 protein;protein_id=WP_012175383.1;transl_table=11 NC_009943.1 RefSeq gene 2379419 2380372 . + . ID=gene-DOLE_RS10095;Name=DOLE_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10095;old_locus_tag=Dole_1968 NC_009943.1 Protein Homology CDS 2379419 2380372 . + 0 ID=cds-WP_012175384.1;Parent=gene-DOLE_RS10095;Dbxref=Genbank:WP_012175384.1;Name=WP_012175384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956917.1;locus_tag=DOLE_RS10095;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_012175384.1;transl_table=11 NC_009943.1 RefSeq gene 2380431 2381549 . - . ID=gene-DOLE_RS10100;Name=DOLE_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10100;old_locus_tag=Dole_1969 NC_009943.1 Protein Homology CDS 2380431 2381549 . - 0 ID=cds-WP_012175385.1;Parent=gene-DOLE_RS10100;Dbxref=Genbank:WP_012175385.1;Name=WP_012175385.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=DOLE_RS10100;product=glycosyltransferase family 1 protein;protein_id=WP_012175385.1;transl_table=11 NC_009943.1 RefSeq gene 2381597 2382574 . - . ID=gene-DOLE_RS10105;Name=DOLE_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10105;old_locus_tag=Dole_1970 NC_009943.1 Protein Homology CDS 2381597 2382574 . - 0 ID=cds-WP_012175386.1;Parent=gene-DOLE_RS10105;Dbxref=Genbank:WP_012175386.1;Name=WP_012175386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=DOLE_RS10105;product=glycosyltransferase;protein_id=WP_012175386.1;transl_table=11 NC_009943.1 RefSeq gene 2382589 2383632 . - . ID=gene-DOLE_RS17425;Name=DOLE_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17425;old_locus_tag=Dole_1971 NC_009943.1 Protein Homology CDS 2382589 2383632 . - 0 ID=cds-WP_012175387.1;Parent=gene-DOLE_RS17425;Dbxref=Genbank:WP_012175387.1;Name=WP_012175387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS17425;product=glycosyltransferase family 2 protein;protein_id=WP_012175387.1;transl_table=11 NC_009943.1 RefSeq gene 2384026 2385489 . - . ID=gene-DOLE_RS10115;Name=DOLE_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10115;old_locus_tag=Dole_1972 NC_009943.1 Protein Homology CDS 2384026 2385489 . - 0 ID=cds-WP_012175388.1;Parent=gene-DOLE_RS10115;Dbxref=Genbank:WP_012175388.1;Name=WP_012175388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019436.2;locus_tag=DOLE_RS10115;product=hypothetical protein;protein_id=WP_012175388.1;transl_table=11 NC_009943.1 RefSeq gene 2385796 2387526 . - . ID=gene-DOLE_RS10120;Name=DOLE_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10120;old_locus_tag=Dole_1973 NC_009943.1 Protein Homology CDS 2385796 2387526 . - 0 ID=cds-WP_012175389.1;Parent=gene-DOLE_RS10120;Dbxref=Genbank:WP_012175389.1;Name=WP_012175389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=DOLE_RS10120;product=AMP-binding protein;protein_id=WP_012175389.1;transl_table=11 NC_009943.1 RefSeq gene 2387523 2388560 . - . ID=gene-DOLE_RS10125;Name=DOLE_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10125;old_locus_tag=Dole_1974 NC_009943.1 Protein Homology CDS 2387523 2388560 . - 0 ID=cds-WP_012175390.1;Parent=gene-DOLE_RS10125;Dbxref=Genbank:WP_012175390.1;Name=WP_012175390.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013046.2;locus_tag=DOLE_RS10125;product=histone deacetylase;protein_id=WP_012175390.1;transl_table=11 NC_009943.1 RefSeq gene 2388720 2390684 . - . ID=gene-DOLE_RS10130;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=DOLE_RS10130;old_locus_tag=Dole_1975 NC_009943.1 Protein Homology CDS 2388720 2390684 . - 0 ID=cds-WP_012175391.1;Parent=gene-DOLE_RS10130;Dbxref=Genbank:WP_012175391.1;Name=WP_012175391.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956046.1;locus_tag=DOLE_RS10130;product=acetate--CoA ligase;protein_id=WP_012175391.1;transl_table=11 NC_009943.1 RefSeq gene 2390703 2392604 . - . ID=gene-DOLE_RS10135;Name=DOLE_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10135;old_locus_tag=Dole_1976 NC_009943.1 Protein Homology CDS 2390703 2392604 . - 0 ID=cds-WP_012175392.1;Parent=gene-DOLE_RS10135;Dbxref=Genbank:WP_012175392.1;Name=WP_012175392.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964799.1;locus_tag=DOLE_RS10135;product=bifunctional acetyl-CoA hydrolase/transferase family protein/GNAT family N-acetyltransferase;protein_id=WP_012175392.1;transl_table=11 NC_009943.1 RefSeq gene 2392862 2393659 . + . ID=gene-DOLE_RS17430;Name=DOLE_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17430;old_locus_tag=Dole_1977 NC_009943.1 Protein Homology CDS 2392862 2393659 . + 0 ID=cds-WP_012175393.1;Parent=gene-DOLE_RS17430;Dbxref=Genbank:WP_012175393.1;Name=WP_012175393.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS17430;product=response regulator;protein_id=WP_012175393.1;transl_table=11 NC_009943.1 RefSeq gene 2393733 2394740 . - . ID=gene-DOLE_RS10145;Name=DOLE_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10145;old_locus_tag=Dole_1978 NC_009943.1 GeneMarkS-2+ CDS 2393733 2394740 . - 0 ID=cds-WP_012175394.1;Parent=gene-DOLE_RS10145;Dbxref=Genbank:WP_012175394.1;Name=WP_012175394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10145;product=hypothetical protein;protein_id=WP_012175394.1;transl_table=11 NC_009943.1 RefSeq gene 2394859 2395788 . - . ID=gene-DOLE_RS10150;Name=DOLE_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10150;old_locus_tag=Dole_1979 NC_009943.1 Protein Homology CDS 2394859 2395788 . - 0 ID=cds-WP_153304409.1;Parent=gene-DOLE_RS10150;Dbxref=Genbank:WP_153304409.1;Name=WP_153304409.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: protein motif:HMM:NF004887.0;locus_tag=DOLE_RS10150;product=putative 2-dehydropantoate 2-reductase;protein_id=WP_153304409.1;transl_table=11 NC_009943.1 RefSeq gene 2395843 2396742 . - . ID=gene-DOLE_RS10155;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=DOLE_RS10155;old_locus_tag=Dole_1980 NC_009943.1 Protein Homology CDS 2395843 2396742 . - 0 ID=cds-WP_012175396.1;Parent=gene-DOLE_RS10155;Dbxref=Genbank:WP_012175396.1;Name=WP_012175396.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904337.1;locus_tag=DOLE_RS10155;product=signal peptide peptidase SppA;protein_id=WP_012175396.1;transl_table=11 NC_009943.1 RefSeq gene 2396865 2398679 . - . ID=gene-DOLE_RS10160;Name=DOLE_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10160;old_locus_tag=Dole_1981 NC_009943.1 Protein Homology CDS 2396865 2398679 . - 0 ID=cds-WP_012175397.1;Parent=gene-DOLE_RS10160;Dbxref=Genbank:WP_012175397.1;Name=WP_012175397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958492.1;locus_tag=DOLE_RS10160;product=30S ribosomal protein S1;protein_id=WP_012175397.1;transl_table=11 NC_009943.1 RefSeq gene 2398785 2399453 . - . ID=gene-DOLE_RS10165;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=DOLE_RS10165;old_locus_tag=Dole_1982 NC_009943.1 Protein Homology CDS 2398785 2399453 . - 0 ID=cds-WP_012175398.1;Parent=gene-DOLE_RS10165;Dbxref=Genbank:WP_012175398.1;Name=WP_012175398.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588995.1;locus_tag=DOLE_RS10165;product=(d)CMP kinase;protein_id=WP_012175398.1;transl_table=11 NC_009943.1 RefSeq gene 2399450 2400538 . - . ID=gene-DOLE_RS10170;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=DOLE_RS10170;old_locus_tag=Dole_1983 NC_009943.1 Protein Homology CDS 2399450 2400538 . - 0 ID=cds-WP_012175399.1;Parent=gene-DOLE_RS10170;Dbxref=Genbank:WP_012175399.1;Name=WP_012175399.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403344.1;locus_tag=DOLE_RS10170;product=histidinol-phosphate transaminase;protein_id=WP_012175399.1;transl_table=11 NC_009943.1 RefSeq gene 2400673 2401845 . + . ID=gene-DOLE_RS10175;Name=DOLE_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10175;old_locus_tag=Dole_1984 NC_009943.1 Protein Homology CDS 2400673 2401845 . + 0 ID=cds-WP_012175400.1;Parent=gene-DOLE_RS10175;Dbxref=Genbank:WP_012175400.1;Name=WP_012175400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004075216.1;locus_tag=DOLE_RS10175;product=DUF1343 domain-containing protein;protein_id=WP_012175400.1;transl_table=11 NC_009943.1 RefSeq gene 2401874 2402566 . + . ID=gene-DOLE_RS17435;Name=DOLE_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17435;old_locus_tag=Dole_1985 NC_009943.1 Protein Homology CDS 2401874 2402566 . + 0 ID=cds-WP_012175401.1;Parent=gene-DOLE_RS17435;Dbxref=Genbank:WP_012175401.1;Name=WP_012175401.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012304.2;locus_tag=DOLE_RS17435;product=ribonuclease H;protein_id=WP_012175401.1;transl_table=11 NC_009943.1 RefSeq gene 2402627 2402896 . - . ID=gene-DOLE_RS10185;Name=DOLE_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10185;old_locus_tag=Dole_1986 NC_009943.1 Protein Homology CDS 2402627 2402896 . - 0 ID=cds-WP_012175402.1;Parent=gene-DOLE_RS10185;Dbxref=Genbank:WP_012175402.1;Name=WP_012175402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610084.1;locus_tag=DOLE_RS10185;product=hypothetical protein;protein_id=WP_012175402.1;transl_table=11 NC_009943.1 RefSeq gene 2403171 2404019 . + . ID=gene-DOLE_RS17440;Name=DOLE_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17440;old_locus_tag=Dole_1987 NC_009943.1 GeneMarkS-2+ CDS 2403171 2404019 . + 0 ID=cds-WP_012175403.1;Parent=gene-DOLE_RS17440;Dbxref=Genbank:WP_012175403.1;Name=WP_012175403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17440;product=hypothetical protein;protein_id=WP_012175403.1;transl_table=11 NC_009943.1 RefSeq gene 2404484 2405449 . - . ID=gene-DOLE_RS10195;Name=DOLE_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10195;old_locus_tag=Dole_1988 NC_009943.1 Protein Homology CDS 2404484 2405449 . - 0 ID=cds-WP_012175404.1;Parent=gene-DOLE_RS10195;Dbxref=Genbank:WP_012175404.1;Name=WP_012175404.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF015325.2;locus_tag=DOLE_RS10195;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_012175404.1;transl_table=11 NC_009943.1 RefSeq gene 2405570 2406226 . - . ID=gene-DOLE_RS10200;Name=DOLE_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10200;old_locus_tag=Dole_1989 NC_009943.1 Protein Homology CDS 2405570 2406226 . - 0 ID=cds-WP_012175405.1;Parent=gene-DOLE_RS10200;Dbxref=Genbank:WP_012175405.1;Name=WP_012175405.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=DOLE_RS10200;product=class I SAM-dependent methyltransferase;protein_id=WP_012175405.1;transl_table=11 NC_009943.1 RefSeq gene 2406213 2406848 . - . ID=gene-DOLE_RS10205;Name=DOLE_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10205;old_locus_tag=Dole_1990 NC_009943.1 Protein Homology CDS 2406213 2406848 . - 0 ID=cds-WP_012175406.1;Parent=gene-DOLE_RS10205;Dbxref=Genbank:WP_012175406.1;Name=WP_012175406.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024067.2;locus_tag=DOLE_RS10205;product=DUF3786 domain-containing protein;protein_id=WP_012175406.1;transl_table=11 NC_009943.1 RefSeq gene 2406997 2409642 . + . ID=gene-DOLE_RS10210;Name=DOLE_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10210;old_locus_tag=Dole_1991 NC_009943.1 Protein Homology CDS 2406997 2409642 . + 0 ID=cds-WP_012175407.1;Parent=gene-DOLE_RS10210;Dbxref=Genbank:WP_012175407.1;Name=WP_012175407.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF039580.1;locus_tag=DOLE_RS10210;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_012175407.1;transl_table=11 NC_009943.1 RefSeq gene 2409639 2411384 . + . ID=gene-DOLE_RS10215;Name=DOLE_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10215;old_locus_tag=Dole_1992 NC_009943.1 Protein Homology CDS 2409639 2411384 . + 0 ID=cds-WP_012175408.1;Parent=gene-DOLE_RS10215;Dbxref=Genbank:WP_012175408.1;Name=WP_012175408.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013775.2;locus_tag=DOLE_RS10215;product=sugar phosphate nucleotidyltransferase;protein_id=WP_012175408.1;transl_table=11 NC_009943.1 RefSeq gene 2411498 2411905 . + . ID=gene-DOLE_RS10220;Name=DOLE_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10220;old_locus_tag=Dole_1993 NC_009943.1 Protein Homology CDS 2411498 2411905 . + 0 ID=cds-WP_012175409.1;Parent=gene-DOLE_RS10220;Dbxref=Genbank:WP_012175409.1;Name=WP_012175409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876341.1;locus_tag=DOLE_RS10220;product=TM2 domain-containing protein;protein_id=WP_012175409.1;transl_table=11 NC_009943.1 RefSeq gene 2411978 2415943 . - . ID=gene-DOLE_RS10225;Name=DOLE_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10225;old_locus_tag=Dole_1994 NC_009943.1 GeneMarkS-2+ CDS 2411978 2415943 . - 0 ID=cds-WP_012175410.1;Parent=gene-DOLE_RS10225;Dbxref=Genbank:WP_012175410.1;Name=WP_012175410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10225;product=thrombospondin type 3 repeat-containing protein;protein_id=WP_012175410.1;transl_table=11 NC_009943.1 RefSeq gene 2416307 2417383 . + . ID=gene-DOLE_RS17445;Name=DOLE_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17445;old_locus_tag=Dole_1995 NC_009943.1 Protein Homology CDS 2416307 2417383 . + 0 ID=cds-WP_052294289.1;Parent=gene-DOLE_RS17445;Dbxref=Genbank:WP_052294289.1;Name=WP_052294289.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017546.2;locus_tag=DOLE_RS17445;product=OmpA family protein;protein_id=WP_052294289.1;transl_table=11 NC_009943.1 RefSeq gene 2417784 2418224 . + . ID=gene-DOLE_RS10235;Name=DOLE_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10235;old_locus_tag=Dole_1996 NC_009943.1 Protein Homology CDS 2417784 2418224 . + 0 ID=cds-WP_012175412.1;Parent=gene-DOLE_RS10235;Dbxref=Genbank:WP_012175412.1;Name=WP_012175412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175414.1;locus_tag=DOLE_RS10235;product=hypothetical protein;protein_id=WP_012175412.1;transl_table=11 NC_009943.1 RefSeq gene 2418287 2419567 . + . ID=gene-DOLE_RS10240;Name=DOLE_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10240;old_locus_tag=Dole_1997 NC_009943.1 Protein Homology CDS 2418287 2419567 . + 0 ID=cds-WP_012175413.1;Parent=gene-DOLE_RS10240;Dbxref=Genbank:WP_012175413.1;Name=WP_012175413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175415.1;locus_tag=DOLE_RS10240;product=hypothetical protein;protein_id=WP_012175413.1;transl_table=11 NC_009943.1 RefSeq gene 2419640 2420080 . + . ID=gene-DOLE_RS10245;Name=DOLE_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10245;old_locus_tag=Dole_1998 NC_009943.1 Protein Homology CDS 2419640 2420080 . + 0 ID=cds-WP_012175414.1;Parent=gene-DOLE_RS10245;Dbxref=Genbank:WP_012175414.1;Name=WP_012175414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175412.1;locus_tag=DOLE_RS10245;product=hypothetical protein;protein_id=WP_012175414.1;transl_table=11 NC_009943.1 RefSeq gene 2420156 2421421 . + . ID=gene-DOLE_RS10250;Name=DOLE_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10250;old_locus_tag=Dole_1999 NC_009943.1 Protein Homology CDS 2420156 2421421 . + 0 ID=cds-WP_012175415.1;Parent=gene-DOLE_RS10250;Dbxref=Genbank:WP_012175415.1;Name=WP_012175415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175413.1;locus_tag=DOLE_RS10250;product=hypothetical protein;protein_id=WP_012175415.1;transl_table=11 NC_009943.1 RefSeq gene 2421552 2423231 . + . ID=gene-DOLE_RS17450;Name=DOLE_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17450;old_locus_tag=Dole_2000 NC_009943.1 Protein Homology CDS 2421552 2423231 . + 0 ID=cds-WP_012175416.1;Parent=gene-DOLE_RS17450;Dbxref=Genbank:WP_012175416.1;Name=WP_012175416.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=DOLE_RS17450;product=methyl-accepting chemotaxis protein;protein_id=WP_012175416.1;transl_table=11 NC_009943.1 RefSeq gene 2423382 2424683 . - . ID=gene-DOLE_RS10260;Name=DOLE_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10260;old_locus_tag=Dole_2001 NC_009943.1 Protein Homology CDS 2423382 2424683 . - 0 ID=cds-WP_012175417.1;Parent=gene-DOLE_RS10260;Dbxref=Genbank:WP_012175417.1;Name=WP_012175417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965646.1;locus_tag=DOLE_RS10260;product=TRAP transporter large permease;protein_id=WP_012175417.1;transl_table=11 NC_009943.1 RefSeq gene 2424680 2425168 . - . ID=gene-DOLE_RS10265;Name=DOLE_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10265;old_locus_tag=Dole_2002 NC_009943.1 Protein Homology CDS 2424680 2425168 . - 0 ID=cds-WP_012175418.1;Parent=gene-DOLE_RS10265;Dbxref=Genbank:WP_012175418.1;Name=WP_012175418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016200.2;locus_tag=DOLE_RS10265;product=TRAP transporter small permease;protein_id=WP_012175418.1;transl_table=11 NC_009943.1 RefSeq gene 2425210 2426280 . - . ID=gene-DOLE_RS10270;Name=DOLE_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10270;old_locus_tag=Dole_2003 NC_009943.1 Protein Homology CDS 2425210 2426280 . - 0 ID=cds-WP_012175419.1;Parent=gene-DOLE_RS10270;Dbxref=Genbank:WP_012175419.1;Name=WP_012175419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949153.1;locus_tag=DOLE_RS10270;product=TRAP transporter substrate-binding protein;protein_id=WP_012175419.1;transl_table=11 NC_009943.1 RefSeq gene 2426708 2428612 . + . ID=gene-DOLE_RS10275;Name=DOLE_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10275;old_locus_tag=Dole_2004 NC_009943.1 Protein Homology CDS 2426708 2428612 . + 0 ID=cds-WP_012175420.1;Parent=gene-DOLE_RS10275;Dbxref=Genbank:WP_012175420.1;Name=WP_012175420.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024883.2;locus_tag=DOLE_RS10275;product=GAF domain-containing protein;protein_id=WP_012175420.1;transl_table=11 NC_009943.1 RefSeq gene 2428854 2430287 . - . ID=gene-DOLE_RS17455;Name=DOLE_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17455;old_locus_tag=Dole_2005 NC_009943.1 Protein Homology CDS 2428854 2430287 . - 0 ID=cds-WP_012175421.1;Parent=gene-DOLE_RS17455;Dbxref=Genbank:WP_012175421.1;Name=WP_012175421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012862.2;locus_tag=DOLE_RS17455;product=caspase family protein;protein_id=WP_012175421.1;transl_table=11 NC_009943.1 RefSeq gene 2430943 2432034 . + . ID=gene-DOLE_RS10290;Name=DOLE_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10290;old_locus_tag=Dole_2006 NC_009943.1 Protein Homology CDS 2430943 2432034 . + 0 ID=cds-WP_012175422.1;Parent=gene-DOLE_RS10290;Dbxref=Genbank:WP_012175422.1;Name=WP_012175422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876667.1;locus_tag=DOLE_RS10290;product=AI-2E family transporter;protein_id=WP_012175422.1;transl_table=11 NC_009943.1 RefSeq gene 2432089 2433102 . + . ID=gene-DOLE_RS10295;Name=DOLE_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10295;old_locus_tag=Dole_2007 NC_009943.1 Protein Homology CDS 2432089 2433102 . + 0 ID=cds-WP_012175423.1;Parent=gene-DOLE_RS10295;Dbxref=Genbank:WP_012175423.1;Name=WP_012175423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877009.1;locus_tag=DOLE_RS10295;product=DUF368 domain-containing protein;protein_id=WP_012175423.1;transl_table=11 NC_009943.1 RefSeq gene 2433196 2434242 . + . ID=gene-DOLE_RS10300;Name=DOLE_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10300;old_locus_tag=Dole_2008 NC_009943.1 Protein Homology CDS 2433196 2434242 . + 0 ID=cds-WP_012175424.1;Parent=gene-DOLE_RS10300;Dbxref=Genbank:WP_012175424.1;Name=WP_012175424.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589018.1;locus_tag=DOLE_RS10300;product=3-oxoacyl-ACP synthase III;protein_id=WP_012175424.1;transl_table=11 NC_009943.1 RefSeq gene 2434242 2435141 . + . ID=gene-DOLE_RS10305;Name=DOLE_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10305;old_locus_tag=Dole_2009 NC_009943.1 Protein Homology CDS 2434242 2435141 . + 0 ID=cds-WP_012175425.1;Parent=gene-DOLE_RS10305;Dbxref=Genbank:WP_012175425.1;Name=WP_012175425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875141.1;locus_tag=DOLE_RS10305;product=alpha/beta fold hydrolase;protein_id=WP_012175425.1;transl_table=11 NC_009943.1 RefSeq gene 2435170 2436864 . + . ID=gene-DOLE_RS10310;Name=DOLE_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10310;old_locus_tag=Dole_2010 NC_009943.1 Protein Homology CDS 2435170 2436864 . + 0 ID=cds-WP_012175426.1;Parent=gene-DOLE_RS10310;Dbxref=Genbank:WP_012175426.1;Name=WP_012175426.1;Ontology_term=GO:0006631,GO:0031956;gbkey=CDS;go_function=medium-chain fatty acid-CoA ligase activity|0031956||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904050.1;locus_tag=DOLE_RS10310;product=fatty acid CoA ligase family protein;protein_id=WP_012175426.1;transl_table=11 NC_009943.1 RefSeq gene 2436867 2437859 . + . ID=gene-DOLE_RS10315;Name=DOLE_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10315;old_locus_tag=Dole_2011 NC_009943.1 Protein Homology CDS 2436867 2437859 . + 0 ID=cds-WP_012175427.1;Parent=gene-DOLE_RS10315;Dbxref=Genbank:WP_012175427.1;Name=WP_012175427.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071877.1;locus_tag=DOLE_RS10315;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012175427.1;transl_table=11 NC_009943.1 RefSeq gene 2437967 2438572 . - . ID=gene-DOLE_RS18680;Name=DOLE_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18680;old_locus_tag=Dole_2012 NC_009943.1 Protein Homology CDS 2437967 2438572 . - 0 ID=cds-WP_012175428.1;Parent=gene-DOLE_RS18680;Dbxref=Genbank:WP_012175428.1;Name=WP_012175428.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.2;locus_tag=DOLE_RS18680;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_012175428.1;transl_table=11 NC_009943.1 RefSeq gene 2438779 2439978 . + . ID=gene-DOLE_RS10325;Name=DOLE_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10325;old_locus_tag=Dole_2013 NC_009943.1 Protein Homology CDS 2438779 2439978 . + 0 ID=cds-WP_041280496.1;Parent=gene-DOLE_RS10325;Dbxref=Genbank:WP_041280496.1;Name=WP_041280496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947602.1;locus_tag=DOLE_RS10325;product=aminopeptidase;protein_id=WP_041280496.1;transl_table=11 NC_009943.1 RefSeq gene 2440159 2443143 . - . ID=gene-DOLE_RS10330;Name=DOLE_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10330;old_locus_tag=Dole_2014 NC_009943.1 Protein Homology CDS 2440159 2443143 . - 0 ID=cds-WP_012175430.1;Parent=gene-DOLE_RS10330;Dbxref=Genbank:WP_012175430.1;Name=WP_012175430.1;Ontology_term=GO:0006508,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013524.2;locus_tag=DOLE_RS10330;product=C25 family cysteine peptidase;protein_id=WP_012175430.1;transl_table=11 NC_009943.1 RefSeq gene 2443288 2444493 . - . ID=gene-DOLE_RS10335;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=DOLE_RS10335;old_locus_tag=Dole_2015 NC_009943.1 Protein Homology CDS 2443288 2444493 . - 0 ID=cds-WP_012175431.1;Parent=gene-DOLE_RS10335;Dbxref=Genbank:WP_012175431.1;Name=WP_012175431.1;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:TIGR00218.1;locus_tag=DOLE_RS10335;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_012175431.1;transl_table=11 NC_009943.1 RefSeq gene 2444654 2446975 . - . ID=gene-DOLE_RS10340;Name=DOLE_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10340;old_locus_tag=Dole_2016 NC_009943.1 Protein Homology CDS 2444654 2446975 . - 0 ID=cds-WP_012175432.1;Parent=gene-DOLE_RS10340;Dbxref=Genbank:WP_012175432.1;Name=WP_012175432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025030.2;locus_tag=DOLE_RS10340;product=SH3 domain-containing protein;protein_id=WP_012175432.1;transl_table=11 NC_009943.1 RefSeq gene 2447031 2447894 . - . ID=gene-DOLE_RS10345;Name=DOLE_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10345;old_locus_tag=Dole_2017 NC_009943.1 Protein Homology CDS 2447031 2447894 . - 0 ID=cds-WP_012175433.1;Parent=gene-DOLE_RS10345;Dbxref=Genbank:WP_012175433.1;Name=WP_012175433.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015722.2;locus_tag=DOLE_RS10345;product=formylglycine-generating enzyme family protein;protein_id=WP_012175433.1;transl_table=11 NC_009943.1 RefSeq gene 2448081 2448281 . - . ID=gene-DOLE_RS10350;Name=DOLE_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10350;old_locus_tag=Dole_2018 NC_009943.1 Protein Homology CDS 2448081 2448281 . - 0 ID=cds-WP_012175434.1;Parent=gene-DOLE_RS10350;Dbxref=Genbank:WP_012175434.1;Name=WP_012175434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609647.1;locus_tag=DOLE_RS10350;product=cold-shock protein;protein_id=WP_012175434.1;transl_table=11 NC_009943.1 RefSeq gene 2448470 2449198 . - . ID=gene-DOLE_RS10355;Name=DOLE_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10355;old_locus_tag=Dole_2019 NC_009943.1 Protein Homology CDS 2448470 2449198 . - 0 ID=cds-WP_012175435.1;Parent=gene-DOLE_RS10355;Dbxref=Genbank:WP_012175435.1;Name=WP_012175435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904186.1;locus_tag=DOLE_RS10355;product=ABC transporter ATP-binding protein;protein_id=WP_012175435.1;transl_table=11 NC_009943.1 RefSeq gene 2449191 2449949 . - . ID=gene-DOLE_RS10360;Name=cbiQ;gbkey=Gene;gene=cbiQ;gene_biotype=protein_coding;locus_tag=DOLE_RS10360;old_locus_tag=Dole_2020 NC_009943.1 Protein Homology CDS 2449191 2449949 . - 0 ID=cds-WP_012175436.1;Parent=gene-DOLE_RS10360;Dbxref=Genbank:WP_012175436.1;Name=WP_012175436.1;Ontology_term=GO:0006824,GO:0032778,GO:0005886,GO:0043190;gbkey=CDS;gene=cbiQ;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=P-type cobalt transporter activity|0032778||IEA;go_process=cobalt ion transport|0006824||IEA;inference=COORDINATES: protein motif:HMM:NF014420.2;locus_tag=DOLE_RS10360;product=cobalt ECF transporter T component CbiQ;protein_id=WP_012175436.1;transl_table=11 NC_009943.1 RefSeq gene 2449957 2450655 . - . ID=gene-DOLE_RS10365;Name=DOLE_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10365;old_locus_tag=Dole_2021 NC_009943.1 GeneMarkS-2+ CDS 2449957 2450655 . - 0 ID=cds-WP_012175437.1;Parent=gene-DOLE_RS10365;Dbxref=Genbank:WP_012175437.1;Name=WP_012175437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10365;product=hypothetical protein;protein_id=WP_012175437.1;transl_table=11 NC_009943.1 RefSeq gene 2450679 2451272 . - . ID=gene-DOLE_RS10370;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=DOLE_RS10370;old_locus_tag=Dole_2022 NC_009943.1 Protein Homology CDS 2450679 2451272 . - 0 ID=cds-WP_012175438.1;Parent=gene-DOLE_RS10370;Dbxref=Genbank:WP_012175438.1;Name=WP_012175438.1;gbkey=CDS;gene=cbiM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904183.1;locus_tag=DOLE_RS10370;product=cobalt transporter CbiM;protein_id=WP_012175438.1;transl_table=11 NC_009943.1 RefSeq gene 2451296 2452069 . - . ID=gene-DOLE_RS10375;Name=DOLE_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10375;old_locus_tag=Dole_2023 NC_009943.1 Protein Homology CDS 2451296 2452069 . - 0 ID=cds-WP_012175439.1;Parent=gene-DOLE_RS10375;Dbxref=Genbank:WP_012175439.1;Name=WP_012175439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072926.1;locus_tag=DOLE_RS10375;product=DUF4198 domain-containing protein;protein_id=WP_012175439.1;transl_table=11 NC_009943.1 RefSeq gene 2452252 2453580 . - . ID=gene-DOLE_RS10380;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=DOLE_RS10380;old_locus_tag=Dole_2024 NC_009943.1 Protein Homology CDS 2452252 2453580 . - 0 ID=cds-WP_012175440.1;Parent=gene-DOLE_RS10380;Dbxref=Genbank:WP_012175440.1;Name=WP_012175440.1;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609280.1;locus_tag=DOLE_RS10380;product=phosphoglucosamine mutase;protein_id=WP_012175440.1;transl_table=11 NC_009943.1 RefSeq gene 2453577 2454860 . - . ID=gene-DOLE_RS10385;Name=DOLE_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10385;old_locus_tag=Dole_2025 NC_009943.1 GeneMarkS-2+ CDS 2453577 2454860 . - 0 ID=cds-WP_012175441.1;Parent=gene-DOLE_RS10385;Dbxref=Genbank:WP_012175441.1;Name=WP_012175441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10385;product=UDP-N-acetylglucosamine pyrophosphorylase;protein_id=WP_012175441.1;transl_table=11 NC_009943.1 RefSeq gene 2455026 2456732 . + . ID=gene-DOLE_RS10390;Name=DOLE_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10390;old_locus_tag=Dole_2026 NC_009943.1 Protein Homology CDS 2455026 2456732 . + 0 ID=cds-WP_012175442.1;Parent=gene-DOLE_RS10390;Dbxref=Genbank:WP_012175442.1;Name=WP_012175442.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024583.2;locus_tag=DOLE_RS10390;product=HD family phosphohydrolase;protein_id=WP_012175442.1;transl_table=11 NC_009943.1 RefSeq gene 2456803 2457183 . - . ID=gene-DOLE_RS10395;Name=DOLE_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10395;old_locus_tag=Dole_2027 NC_009943.1 GeneMarkS-2+ CDS 2456803 2457183 . - 0 ID=cds-WP_041280499.1;Parent=gene-DOLE_RS10395;Dbxref=Genbank:WP_041280499.1;Name=WP_041280499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10395;product=hypothetical protein;protein_id=WP_041280499.1;transl_table=11 NC_009943.1 RefSeq gene 2457501 2458217 . - . ID=gene-DOLE_RS10400;Name=DOLE_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10400;old_locus_tag=Dole_2028 NC_009943.1 GeneMarkS-2+ CDS 2457501 2458217 . - 0 ID=cds-WP_052294292.1;Parent=gene-DOLE_RS10400;Dbxref=Genbank:WP_052294292.1;Name=WP_052294292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10400;product=hypothetical protein;protein_id=WP_052294292.1;transl_table=11 NC_009943.1 RefSeq gene 2458385 2458461 . - . ID=gene-DOLE_RS10405;Name=DOLE_RS10405;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS10405;old_locus_tag=Dole_R0029 NC_009943.1 tRNAscan-SE tRNA 2458385 2458461 . - . ID=rna-DOLE_RS10405;Parent=gene-DOLE_RS10405;anticodon=(pos:complement(2458425..2458427));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS10405;product=tRNA-Pro NC_009943.1 tRNAscan-SE exon 2458385 2458461 . - . ID=exon-DOLE_RS10405-1;Parent=rna-DOLE_RS10405;anticodon=(pos:complement(2458425..2458427));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS10405;product=tRNA-Pro NC_009943.1 RefSeq gene 2458610 2459899 . - . ID=gene-DOLE_RS10410;Name=DOLE_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10410;old_locus_tag=Dole_2029 NC_009943.1 Protein Homology CDS 2458610 2459899 . - 0 ID=cds-WP_012175445.1;Parent=gene-DOLE_RS10410;Dbxref=Genbank:WP_012175445.1;Name=WP_012175445.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175445.1;locus_tag=DOLE_RS10410;product=adenylosuccinate synthase;protein_id=WP_012175445.1;transl_table=11 NC_009943.1 RefSeq gene 2459928 2460389 . - . ID=gene-DOLE_RS10415;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=DOLE_RS10415;old_locus_tag=Dole_2030 NC_009943.1 Protein Homology CDS 2459928 2460389 . - 0 ID=cds-WP_269719165.1;Parent=gene-DOLE_RS10415;Dbxref=Genbank:WP_269719165.1;Name=WP_269719165.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903633.1;locus_tag=DOLE_RS10415;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_269719165.1;transl_table=11 NC_009943.1 RefSeq gene 2460389 2461825 . - . ID=gene-DOLE_RS10420;Name=DOLE_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10420;old_locus_tag=Dole_2031 NC_009943.1 Protein Homology CDS 2460389 2461825 . - 0 ID=cds-WP_012175447.1;Parent=gene-DOLE_RS10420;Dbxref=Genbank:WP_012175447.1;Name=WP_012175447.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957595.1;locus_tag=DOLE_RS10420;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_012175447.1;transl_table=11 NC_009943.1 RefSeq gene 2461822 2462673 . - . ID=gene-DOLE_RS10425;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=DOLE_RS10425;old_locus_tag=Dole_2032 NC_009943.1 Protein Homology CDS 2461822 2462673 . - 0 ID=cds-WP_012175448.1;Parent=gene-DOLE_RS10425;Dbxref=Genbank:WP_012175448.1;Name=WP_012175448.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: protein motif:HMM:TIGR01331.1;locus_tag=DOLE_RS10425;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_012175448.1;transl_table=11 NC_009943.1 RefSeq gene 2462736 2462810 . - . ID=gene-DOLE_RS10430;Name=DOLE_RS10430;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS10430;old_locus_tag=Dole_R0030 NC_009943.1 tRNAscan-SE tRNA 2462736 2462810 . - . ID=rna-DOLE_RS10430;Parent=gene-DOLE_RS10430;anticodon=(pos:complement(2462776..2462778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS10430;product=tRNA-Cys NC_009943.1 tRNAscan-SE exon 2462736 2462810 . - . ID=exon-DOLE_RS10430-1;Parent=rna-DOLE_RS10430;anticodon=(pos:complement(2462776..2462778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS10430;product=tRNA-Cys NC_009943.1 RefSeq gene 2462819 2462893 . - . ID=gene-DOLE_RS10435;Name=DOLE_RS10435;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS10435;old_locus_tag=Dole_R0031 NC_009943.1 tRNAscan-SE tRNA 2462819 2462893 . - . ID=rna-DOLE_RS10435;Parent=gene-DOLE_RS10435;anticodon=(pos:complement(2462859..2462861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS10435;product=tRNA-Gly NC_009943.1 tRNAscan-SE exon 2462819 2462893 . - . ID=exon-DOLE_RS10435-1;Parent=rna-DOLE_RS10435;anticodon=(pos:complement(2462859..2462861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS10435;product=tRNA-Gly NC_009943.1 RefSeq gene 2462998 2463909 . - . ID=gene-DOLE_RS10440;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=DOLE_RS10440;old_locus_tag=Dole_2033 NC_009943.1 Protein Homology CDS 2462998 2463909 . - 0 ID=cds-WP_012175449.1;Parent=gene-DOLE_RS10440;Dbxref=Genbank:WP_012175449.1;Name=WP_012175449.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175449.1;locus_tag=DOLE_RS10440;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_012175449.1;transl_table=11 NC_009943.1 RefSeq gene 2463999 2465051 . - . ID=gene-DOLE_RS10445;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=DOLE_RS10445;old_locus_tag=Dole_2034 NC_009943.1 Protein Homology CDS 2463999 2465051 . - 0 ID=cds-WP_012175450.1;Parent=gene-DOLE_RS10445;Dbxref=Genbank:WP_012175450.1;Name=WP_012175450.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947452.1;locus_tag=DOLE_RS10445;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_012175450.1;transl_table=11 NC_009943.1 RefSeq gene 2465365 2465697 . + . ID=gene-DOLE_RS10450;Name=DOLE_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10450 NC_009943.1 GeneMarkS-2+ CDS 2465365 2465697 . + 0 ID=cds-WP_041280500.1;Parent=gene-DOLE_RS10450;Dbxref=Genbank:WP_041280500.1;Name=WP_041280500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10450;product=hypothetical protein;protein_id=WP_041280500.1;transl_table=11 NC_009943.1 RefSeq gene 2465857 2467044 . + . ID=gene-DOLE_RS10455;Name=DOLE_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10455;old_locus_tag=Dole_2035 NC_009943.1 Protein Homology CDS 2465857 2467044 . + 0 ID=cds-WP_012175451.1;Parent=gene-DOLE_RS10455;Dbxref=Genbank:WP_012175451.1;Name=WP_012175451.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903729.1;locus_tag=DOLE_RS10455;product=THUMP domain-containing protein;protein_id=WP_012175451.1;transl_table=11 NC_009943.1 RefSeq gene 2467348 2469021 . + . ID=gene-DOLE_RS10460;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=DOLE_RS10460;old_locus_tag=Dole_2036 NC_009943.1 Protein Homology CDS 2467348 2469021 . + 0 ID=cds-WP_012175452.1;Parent=gene-DOLE_RS10460;Dbxref=Genbank:WP_012175452.1;Name=WP_012175452.1;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175452.1;locus_tag=DOLE_RS10460;product=dihydroxy-acid dehydratase;protein_id=WP_012175452.1;transl_table=11 NC_009943.1 RefSeq gene 2469037 2470731 . + . ID=gene-DOLE_RS10465;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=DOLE_RS10465;old_locus_tag=Dole_2037 NC_009943.1 Protein Homology CDS 2469037 2470731 . + 0 ID=cds-WP_012175453.1;Parent=gene-DOLE_RS10465;Dbxref=Genbank:WP_012175453.1;Name=WP_012175453.1;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvB;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586322.1;locus_tag=DOLE_RS10465;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_012175453.1;transl_table=11 NC_009943.1 RefSeq gene 2470747 2471247 . + . ID=gene-DOLE_RS10470;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=DOLE_RS10470;old_locus_tag=Dole_2038 NC_009943.1 Protein Homology CDS 2470747 2471247 . + 0 ID=cds-WP_012175454.1;Parent=gene-DOLE_RS10470;Dbxref=Genbank:WP_012175454.1;Name=WP_012175454.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903967.1;locus_tag=DOLE_RS10470;product=acetolactate synthase small subunit;protein_id=WP_012175454.1;transl_table=11 NC_009943.1 RefSeq gene 2471286 2472344 . + . ID=gene-DOLE_RS10475;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=DOLE_RS10475;old_locus_tag=Dole_2039 NC_009943.1 Protein Homology CDS 2471286 2472344 . + 0 ID=cds-WP_012175455.1;Parent=gene-DOLE_RS10475;Dbxref=Genbank:WP_012175455.1;Name=WP_012175455.1;Ontology_term=GO:0009097,GO:0009099,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875160.1;locus_tag=DOLE_RS10475;product=ketol-acid reductoisomerase;protein_id=WP_012175455.1;transl_table=11 NC_009943.1 RefSeq gene 2472529 2474157 . + . ID=gene-DOLE_RS10480;Name=cimA;gbkey=Gene;gene=cimA;gene_biotype=protein_coding;locus_tag=DOLE_RS10480;old_locus_tag=Dole_2040 NC_009943.1 Protein Homology CDS 2472529 2474157 . + 0 ID=cds-WP_012175456.1;Parent=gene-DOLE_RS10480;Dbxref=Genbank:WP_012175456.1;Name=WP_012175456.1;Ontology_term=GO:0009097,GO:0043714;gbkey=CDS;gene=cimA;go_function=(R)-citramalate synthase activity|0043714||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875161.1;locus_tag=DOLE_RS10480;product=citramalate synthase;protein_id=WP_012175456.1;transl_table=11 NC_009943.1 RefSeq gene 2474166 2475701 . + . ID=gene-DOLE_RS10485;Name=DOLE_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10485;old_locus_tag=Dole_2041 NC_009943.1 Protein Homology CDS 2474166 2475701 . + 0 ID=cds-WP_012175457.1;Parent=gene-DOLE_RS10485;Dbxref=Genbank:WP_012175457.1;Name=WP_012175457.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875162.1;locus_tag=DOLE_RS10485;product=2-isopropylmalate synthase;protein_id=WP_012175457.1;transl_table=11 NC_009943.1 RefSeq gene 2475751 2476269 . - . ID=gene-DOLE_RS10490;Name=DOLE_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10490;old_locus_tag=Dole_2042 NC_009943.1 GeneMarkS-2+ CDS 2475751 2476269 . - 0 ID=cds-WP_012175458.1;Parent=gene-DOLE_RS10490;Dbxref=Genbank:WP_012175458.1;Name=WP_012175458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10490;product=hypothetical protein;protein_id=WP_012175458.1;transl_table=11 NC_009943.1 RefSeq gene 2476378 2482473 . - . ID=gene-DOLE_RS10495;Name=DOLE_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10495;old_locus_tag=Dole_2043 NC_009943.1 Protein Homology CDS 2476378 2482473 . - 0 ID=cds-WP_012175459.1;Parent=gene-DOLE_RS10495;Dbxref=Genbank:WP_012175459.1;Name=WP_012175459.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039815.1;locus_tag=DOLE_RS10495;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_012175459.1;transl_table=11 NC_009943.1 RefSeq gene 2483012 2483884 . - . ID=gene-DOLE_RS10500;Name=DOLE_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10500;old_locus_tag=Dole_2044 NC_009943.1 GeneMarkS-2+ CDS 2483012 2483884 . - 0 ID=cds-WP_153304411.1;Parent=gene-DOLE_RS10500;Dbxref=Genbank:WP_153304411.1;Name=WP_153304411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10500;product=hypothetical protein;protein_id=WP_153304411.1;transl_table=11 NC_009943.1 RefSeq gene 2483895 2486117 . - . ID=gene-DOLE_RS10505;Name=DOLE_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10505;old_locus_tag=Dole_2045 NC_009943.1 Protein Homology CDS 2483895 2486117 . - 0 ID=cds-WP_012175461.1;Parent=gene-DOLE_RS10505;Dbxref=Genbank:WP_012175461.1;Name=WP_012175461.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=DOLE_RS10505;product=RHS repeat-associated core domain-containing protein;protein_id=WP_012175461.1;transl_table=11 NC_009943.1 RefSeq gene 2486249 2486455 . + . ID=gene-DOLE_RS10510;Name=DOLE_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10510 NC_009943.1 GeneMarkS-2+ CDS 2486249 2486455 . + 0 ID=cds-WP_041280502.1;Parent=gene-DOLE_RS10510;Dbxref=Genbank:WP_041280502.1;Name=WP_041280502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10510;product=hypothetical protein;protein_id=WP_041280502.1;transl_table=11 NC_009943.1 RefSeq gene 2486508 2486699 . - . ID=gene-DOLE_RS10515;Name=DOLE_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10515 NC_009943.1 GeneMarkS-2+ CDS 2486508 2486699 . - 0 ID=cds-WP_041280503.1;Parent=gene-DOLE_RS10515;Dbxref=Genbank:WP_041280503.1;Name=WP_041280503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10515;product=hypothetical protein;protein_id=WP_041280503.1;transl_table=11 NC_009943.1 RefSeq gene 2486741 2489470 . - . ID=gene-DOLE_RS10520;Name=DOLE_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10520;old_locus_tag=Dole_2046 NC_009943.1 Protein Homology CDS 2486741 2489470 . - 0 ID=cds-WP_012175462.1;Parent=gene-DOLE_RS10520;Dbxref=Genbank:WP_012175462.1;Name=WP_012175462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175464.1;locus_tag=DOLE_RS10520;product=RHS repeat-associated core domain-containing protein;protein_id=WP_012175462.1;transl_table=11 NC_009943.1 RefSeq gene 2489773 2490534 . - . ID=gene-DOLE_RS10525;Name=DOLE_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10525;old_locus_tag=Dole_2047 NC_009943.1 GeneMarkS-2+ CDS 2489773 2490534 . - 0 ID=cds-WP_012175463.1;Parent=gene-DOLE_RS10525;Dbxref=Genbank:WP_012175463.1;Name=WP_012175463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10525;product=hypothetical protein;protein_id=WP_012175463.1;transl_table=11 NC_009943.1 RefSeq gene 2490537 2493455 . - . ID=gene-DOLE_RS10530;Name=DOLE_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10530;old_locus_tag=Dole_2048 NC_009943.1 Protein Homology CDS 2490537 2493455 . - 0 ID=cds-WP_012175464.1;Parent=gene-DOLE_RS10530;Dbxref=Genbank:WP_012175464.1;Name=WP_012175464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175462.1;locus_tag=DOLE_RS10530;product=RHS repeat-associated core domain-containing protein;protein_id=WP_012175464.1;transl_table=11 NC_009943.1 RefSeq gene 2493795 2494235 . - . ID=gene-DOLE_RS10535;Name=DOLE_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10535;old_locus_tag=Dole_2049 NC_009943.1 GeneMarkS-2+ CDS 2493795 2494235 . - 0 ID=cds-WP_012175465.1;Parent=gene-DOLE_RS10535;Dbxref=Genbank:WP_012175465.1;Name=WP_012175465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10535;product=hypothetical protein;protein_id=WP_012175465.1;transl_table=11 NC_009943.1 RefSeq gene 2494250 2499526 . - . ID=gene-DOLE_RS10540;Name=DOLE_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10540;old_locus_tag=Dole_2050 NC_009943.1 Protein Homology CDS 2494250 2499526 . - 0 ID=cds-WP_041280505.1;Parent=gene-DOLE_RS10540;Dbxref=Genbank:WP_041280505.1;Name=WP_041280505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=DOLE_RS10540;product=RHS repeat-associated core domain-containing protein;protein_id=WP_041280505.1;transl_table=11 NC_009943.1 RefSeq gene 2500589 2501335 . - . ID=gene-DOLE_RS10545;Name=DOLE_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10545;old_locus_tag=Dole_2051 NC_009943.1 Protein Homology CDS 2500589 2501335 . - 0 ID=cds-WP_012175467.1;Parent=gene-DOLE_RS10545;Dbxref=Genbank:WP_012175467.1;Name=WP_012175467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016241.2;locus_tag=DOLE_RS10545;product=DUF481 domain-containing protein;protein_id=WP_012175467.1;transl_table=11 NC_009943.1 RefSeq gene 2501690 2502928 . - . ID=gene-DOLE_RS10550;Name=DOLE_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10550;old_locus_tag=Dole_2052 NC_009943.1 Protein Homology CDS 2501690 2502928 . - 0 ID=cds-WP_012175468.1;Parent=gene-DOLE_RS10550;Dbxref=Genbank:WP_012175468.1;Name=WP_012175468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.2;locus_tag=DOLE_RS10550;product=glycosyltransferase family 4 protein;protein_id=WP_012175468.1;transl_table=11 NC_009943.1 RefSeq gene 2503203 2503544 . + . ID=gene-DOLE_RS17460;Name=DOLE_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17460;old_locus_tag=Dole_2053 NC_009943.1 Protein Homology CDS 2503203 2503544 . + 0 ID=cds-WP_012175469.1;Parent=gene-DOLE_RS17460;Dbxref=Genbank:WP_012175469.1;Name=WP_012175469.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022841.2;locus_tag=DOLE_RS17460;product=DUF3192 domain-containing protein;protein_id=WP_012175469.1;transl_table=11 NC_009943.1 RefSeq gene 2504046 2505314 . + . ID=gene-DOLE_RS10560;Name=DOLE_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10560;old_locus_tag=Dole_2054 NC_009943.1 Protein Homology CDS 2504046 2505314 . + 0 ID=cds-WP_012175470.1;Parent=gene-DOLE_RS10560;Dbxref=Genbank:WP_012175470.1;Name=WP_012175470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966525.1;locus_tag=DOLE_RS10560;product=hemolysin family protein;protein_id=WP_012175470.1;transl_table=11 NC_009943.1 RefSeq gene 2505404 2506078 . + . ID=gene-DOLE_RS10565;Name=DOLE_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10565;old_locus_tag=Dole_2055 NC_009943.1 Protein Homology CDS 2505404 2506078 . + 0 ID=cds-WP_041281075.1;Parent=gene-DOLE_RS10565;Dbxref=Genbank:WP_041281075.1;Name=WP_041281075.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03302.1;locus_tag=DOLE_RS10565;product=outer membrane protein assembly factor BamD;protein_id=WP_041281075.1;transl_table=11 NC_009943.1 RefSeq gene 2506165 2506356 . + . ID=gene-DOLE_RS10570;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=DOLE_RS10570;old_locus_tag=Dole_2056 NC_009943.1 Protein Homology CDS 2506165 2506356 . + 0 ID=cds-WP_012175472.1;Parent=gene-DOLE_RS10570;Dbxref=Genbank:WP_012175472.1;Name=WP_012175472.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175472.1;locus_tag=DOLE_RS10570;product=50S ribosomal protein L28;protein_id=WP_012175472.1;transl_table=11 NC_009943.1 RefSeq gene 2506452 2508602 . - . ID=gene-DOLE_RS10575;Name=DOLE_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10575;old_locus_tag=Dole_2057 NC_009943.1 Protein Homology CDS 2506452 2508602 . - 0 ID=cds-WP_012175473.1;Parent=gene-DOLE_RS10575;Dbxref=Genbank:WP_012175473.1;Name=WP_012175473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875983.1;locus_tag=DOLE_RS10575;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_012175473.1;transl_table=11 NC_009943.1 RefSeq gene 2508682 2510208 . - . ID=gene-DOLE_RS10580;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=DOLE_RS10580;old_locus_tag=Dole_2058 NC_009943.1 Protein Homology CDS 2508682 2510208 . - 0 ID=cds-WP_012175474.1;Parent=gene-DOLE_RS10580;Dbxref=Genbank:WP_012175474.1;Name=WP_012175474.1;Ontology_term=GO:0006433,GO:0004827;gbkey=CDS;gene=proS;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070596.1;locus_tag=DOLE_RS10580;product=proline--tRNA ligase;protein_id=WP_012175474.1;transl_table=11 NC_009943.1 RefSeq gene 2510208 2511305 . - . ID=gene-DOLE_RS10585;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=DOLE_RS10585;old_locus_tag=Dole_2059 NC_009943.1 Protein Homology CDS 2510208 2511305 . - 0 ID=cds-WP_012175475.1;Parent=gene-DOLE_RS10585;Dbxref=Genbank:WP_012175475.1;Name=WP_012175475.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959329.1;locus_tag=DOLE_RS10585;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_012175475.1;transl_table=11 NC_009943.1 RefSeq gene 2511579 2512508 . + . ID=gene-DOLE_RS10590;Name=DOLE_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10590;old_locus_tag=Dole_2060 NC_009943.1 Protein Homology CDS 2511579 2512508 . + 0 ID=cds-WP_012175476.1;Parent=gene-DOLE_RS10590;Dbxref=Genbank:WP_012175476.1;Name=WP_012175476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905967.1;locus_tag=DOLE_RS10590;product=cobalamin-binding protein;protein_id=WP_012175476.1;transl_table=11 NC_009943.1 RefSeq gene 2512505 2513518 . + . ID=gene-DOLE_RS10595;Name=DOLE_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10595;old_locus_tag=Dole_2061 NC_009943.1 Protein Homology CDS 2512505 2513518 . + 0 ID=cds-WP_012175477.1;Parent=gene-DOLE_RS10595;Dbxref=Genbank:WP_012175477.1;Name=WP_012175477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905966.1;locus_tag=DOLE_RS10595;product=iron ABC transporter permease;protein_id=WP_012175477.1;transl_table=11 NC_009943.1 RefSeq gene 2513515 2514315 . + . ID=gene-DOLE_RS10600;Name=DOLE_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10600;old_locus_tag=Dole_2062 NC_009943.1 Protein Homology CDS 2513515 2514315 . + 0 ID=cds-WP_012175478.1;Parent=gene-DOLE_RS10600;Dbxref=Genbank:WP_012175478.1;Name=WP_012175478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905965.1;locus_tag=DOLE_RS10600;product=ABC transporter ATP-binding protein;protein_id=WP_012175478.1;transl_table=11 NC_009943.1 RefSeq gene 2514490 2515647 . + . ID=gene-DOLE_RS17465;Name=DOLE_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17465;old_locus_tag=Dole_2063 NC_009943.1 Protein Homology CDS 2514490 2515647 . + 0 ID=cds-WP_012175479.1;Parent=gene-DOLE_RS17465;Dbxref=Genbank:WP_012175479.1;Name=WP_012175479.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024634.2;locus_tag=DOLE_RS17465;product=4Fe-4S binding protein;protein_id=WP_012175479.1;transl_table=11 NC_009943.1 RefSeq gene 2515662 2516729 . + . ID=gene-DOLE_RS10610;Name=DOLE_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10610;old_locus_tag=Dole_2064 NC_009943.1 Protein Homology CDS 2515662 2516729 . + 0 ID=cds-WP_012175480.1;Parent=gene-DOLE_RS10610;Dbxref=Genbank:WP_012175480.1;Name=WP_012175480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947793.1;locus_tag=DOLE_RS10610;product=4Fe-4S binding protein;protein_id=WP_012175480.1;transl_table=11 NC_009943.1 cmsearch riboswitch 2517001 2517194 . + . ID=id-NC_009943.1:2517001..2517194;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NC_009943.1 RefSeq gene 2517238 2518368 . + . ID=gene-DOLE_RS10620;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=DOLE_RS10620;old_locus_tag=Dole_2065 NC_009943.1 Protein Homology CDS 2517238 2518368 . + 0 ID=cds-WP_012175481.1;Parent=gene-DOLE_RS10620;Dbxref=Genbank:WP_012175481.1;Name=WP_012175481.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: protein motif:HMM:NF000996.0;locus_tag=DOLE_RS10620;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_012175481.1;transl_table=11 NC_009943.1 RefSeq gene 2518386 2518586 . - . ID=gene-DOLE_RS10625;Name=DOLE_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10625;old_locus_tag=Dole_2066 NC_009943.1 GeneMarkS-2+ CDS 2518386 2518586 . - 0 ID=cds-WP_012175482.1;Parent=gene-DOLE_RS10625;Dbxref=Genbank:WP_012175482.1;Name=WP_012175482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10625;product=hypothetical protein;protein_id=WP_012175482.1;transl_table=11 NC_009943.1 RefSeq gene 2518593 2519528 . - . ID=gene-DOLE_RS10630;Name=DOLE_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10630;old_locus_tag=Dole_2067 NC_009943.1 Protein Homology CDS 2518593 2519528 . - 0 ID=cds-WP_012175483.1;Parent=gene-DOLE_RS10630;Dbxref=Genbank:WP_012175483.1;Name=WP_012175483.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025598.2;locus_tag=DOLE_RS10630;product=DUF4340 domain-containing protein;protein_id=WP_012175483.1;transl_table=11 NC_009943.1 RefSeq gene 2519625 2521814 . - . ID=gene-DOLE_RS10635;Name=DOLE_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10635;old_locus_tag=Dole_2068 NC_009943.1 Protein Homology CDS 2519625 2521814 . - 0 ID=cds-WP_012175484.1;Parent=gene-DOLE_RS10635;Dbxref=Genbank:WP_012175484.1;Name=WP_012175484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965883.1;locus_tag=DOLE_RS10635;product=Gldg family protein;protein_id=WP_012175484.1;transl_table=11 NC_009943.1 RefSeq gene 2521827 2522531 . - . ID=gene-DOLE_RS10640;Name=DOLE_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10640;old_locus_tag=Dole_2069 NC_009943.1 Protein Homology CDS 2521827 2522531 . - 0 ID=cds-WP_012175485.1;Parent=gene-DOLE_RS10640;Dbxref=Genbank:WP_012175485.1;Name=WP_012175485.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905101.1;locus_tag=DOLE_RS10640;product=ABC transporter permease subunit;protein_id=WP_012175485.1;transl_table=11 NC_009943.1 RefSeq gene 2522533 2523483 . - . ID=gene-DOLE_RS10645;Name=DOLE_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10645;old_locus_tag=Dole_2070 NC_009943.1 Protein Homology CDS 2522533 2523483 . - 0 ID=cds-WP_012175486.1;Parent=gene-DOLE_RS10645;Dbxref=Genbank:WP_012175486.1;Name=WP_012175486.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073603.1;locus_tag=DOLE_RS10645;product=ATP-binding cassette domain-containing protein;protein_id=WP_012175486.1;transl_table=11 NC_009943.1 RefSeq gene 2523794 2524684 . + . ID=gene-DOLE_RS10650;Name=DOLE_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10650;old_locus_tag=Dole_2071 NC_009943.1 Protein Homology CDS 2523794 2524684 . + 0 ID=cds-WP_012175487.1;Parent=gene-DOLE_RS10650;Dbxref=Genbank:WP_012175487.1;Name=WP_012175487.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025684.2;locus_tag=DOLE_RS10650;product=DUF4384 domain-containing protein;protein_id=WP_012175487.1;transl_table=11 NC_009943.1 RefSeq gene 2524923 2525549 . - . ID=gene-DOLE_RS10655;Name=DOLE_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10655;old_locus_tag=Dole_2072 NC_009943.1 Protein Homology CDS 2524923 2525549 . - 0 ID=cds-WP_041280509.1;Parent=gene-DOLE_RS10655;Dbxref=Genbank:WP_041280509.1;Name=WP_041280509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904967.1;locus_tag=DOLE_RS10655;product=MBL fold metallo-hydrolase;protein_id=WP_041280509.1;transl_table=11 NC_009943.1 RefSeq gene 2525586 2525846 . - . ID=gene-DOLE_RS10660;Name=DOLE_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10660;old_locus_tag=Dole_2073 NC_009943.1 GeneMarkS-2+ CDS 2525586 2525846 . - 0 ID=cds-WP_012175489.1;Parent=gene-DOLE_RS10660;Dbxref=Genbank:WP_012175489.1;Name=WP_012175489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10660;product=hypothetical protein;protein_id=WP_012175489.1;transl_table=11 NC_009943.1 RefSeq gene 2525989 2527365 . - . ID=gene-DOLE_RS10665;Name=DOLE_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10665;old_locus_tag=Dole_2074 NC_009943.1 Protein Homology CDS 2525989 2527365 . - 0 ID=cds-WP_012175490.1;Parent=gene-DOLE_RS10665;Dbxref=Genbank:WP_012175490.1;Name=WP_012175490.1;Ontology_term=GO:0000162,GO:0006568,GO:0004834,GO:0030170;gbkey=CDS;go_function=tryptophan synthase activity|0004834||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=tryptophan biosynthetic process|0000162||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948697.1;locus_tag=DOLE_RS10665;product=TrpB-like pyridoxal phosphate-dependent enzyme;protein_id=WP_012175490.1;transl_table=11 NC_009943.1 RefSeq gene 2527369 2527833 . - . ID=gene-DOLE_RS10670;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=DOLE_RS10670;old_locus_tag=Dole_2075 NC_009943.1 Protein Homology CDS 2527369 2527833 . - 0 ID=cds-WP_012175491.1;Parent=gene-DOLE_RS10670;Dbxref=Genbank:WP_012175491.1;Name=WP_012175491.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958712.1;locus_tag=DOLE_RS10670;product=transcription antitermination factor NusB;protein_id=WP_012175491.1;transl_table=11 NC_009943.1 RefSeq gene 2527840 2528313 . - . ID=gene-DOLE_RS10675;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=DOLE_RS10675;old_locus_tag=Dole_2076 NC_009943.1 Protein Homology CDS 2527840 2528313 . - 0 ID=cds-WP_012175492.1;Parent=gene-DOLE_RS10675;Dbxref=Genbank:WP_012175492.1;Name=WP_012175492.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175492.1;locus_tag=DOLE_RS10675;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_012175492.1;transl_table=11 NC_009943.1 RefSeq gene 2528432 2529646 . - . ID=gene-DOLE_RS10680;Name=DOLE_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10680;old_locus_tag=Dole_2077 NC_009943.1 Protein Homology CDS 2528432 2529646 . - 0 ID=cds-WP_012175493.1;Parent=gene-DOLE_RS10680;Dbxref=Genbank:WP_012175493.1;Name=WP_012175493.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904970.1;locus_tag=DOLE_RS10680;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_012175493.1;transl_table=11 NC_009943.1 RefSeq gene 2529708 2530358 . - . ID=gene-DOLE_RS10685;Name=DOLE_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10685;old_locus_tag=Dole_2078 NC_009943.1 Protein Homology CDS 2529708 2530358 . - 0 ID=cds-WP_012175494.1;Parent=gene-DOLE_RS10685;Dbxref=Genbank:WP_012175494.1;Name=WP_012175494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875974.1;locus_tag=DOLE_RS10685;product=riboflavin synthase;protein_id=WP_012175494.1;transl_table=11 NC_009943.1 RefSeq gene 2530358 2531449 . - . ID=gene-DOLE_RS10690;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=DOLE_RS10690;old_locus_tag=Dole_2079 NC_009943.1 Protein Homology CDS 2530358 2531449 . - 0 ID=cds-WP_012175495.1;Parent=gene-DOLE_RS10690;Dbxref=Genbank:WP_012175495.1;Name=WP_012175495.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958716.1;locus_tag=DOLE_RS10690;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_012175495.1;transl_table=11 NC_009943.1 RefSeq gene 2531521 2531976 . - . ID=gene-DOLE_RS10695;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=DOLE_RS10695;old_locus_tag=Dole_2080 NC_009943.1 Protein Homology CDS 2531521 2531976 . - 0 ID=cds-WP_012175496.1;Parent=gene-DOLE_RS10695;Dbxref=Genbank:WP_012175496.1;Name=WP_012175496.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175496.1;locus_tag=DOLE_RS10695;product=transcriptional regulator NrdR;protein_id=WP_012175496.1;transl_table=11 NC_009943.1 RefSeq gene 2531992 2532459 . - . ID=gene-DOLE_RS10700;Name=DOLE_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10700;old_locus_tag=Dole_2081 NC_009943.1 Protein Homology CDS 2531992 2532459 . - 0 ID=cds-WP_012175497.1;Parent=gene-DOLE_RS10700;Dbxref=Genbank:WP_012175497.1;Name=WP_012175497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958718.1;locus_tag=DOLE_RS10700;product=cytidine/deoxycytidylate deaminase family protein;protein_id=WP_012175497.1;transl_table=11 NC_009943.1 RefSeq gene 2532452 2533705 . - . ID=gene-DOLE_RS10705;Name=DOLE_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10705;old_locus_tag=Dole_2082 NC_009943.1 Protein Homology CDS 2532452 2533705 . - 0 ID=cds-WP_041281080.1;Parent=gene-DOLE_RS10705;Dbxref=Genbank:WP_041281080.1;Name=WP_041281080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175498.1;locus_tag=DOLE_RS10705;product=serine hydroxymethyltransferase;protein_id=WP_041281080.1;transl_table=11 NC_009943.1 RefSeq gene 2533770 2534000 . - . ID=gene-DOLE_RS10710;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=DOLE_RS10710;old_locus_tag=Dole_2083 NC_009943.1 Protein Homology CDS 2533770 2534000 . - 0 ID=cds-WP_012175499.1;Parent=gene-DOLE_RS10710;Dbxref=Genbank:WP_012175499.1;Name=WP_012175499.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175499.1;locus_tag=DOLE_RS10710;product=acyl carrier protein;protein_id=WP_012175499.1;transl_table=11 NC_009943.1 RefSeq gene 2534129 2534881 . - . ID=gene-DOLE_RS10715;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=DOLE_RS10715;old_locus_tag=Dole_2084 NC_009943.1 Protein Homology CDS 2534129 2534881 . - 0 ID=cds-WP_012175500.1;Parent=gene-DOLE_RS10715;Dbxref=Genbank:WP_012175500.1;Name=WP_012175500.1;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404791.1;locus_tag=DOLE_RS10715;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_012175500.1;transl_table=11 NC_009943.1 RefSeq gene 2534925 2535104 . - . ID=gene-DOLE_RS10720;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=DOLE_RS10720;old_locus_tag=Dole_2085 NC_009943.1 Protein Homology CDS 2534925 2535104 . - 0 ID=cds-WP_041280512.1;Parent=gene-DOLE_RS10720;Dbxref=Genbank:WP_041280512.1;Name=WP_041280512.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948053.1;locus_tag=DOLE_RS10720;product=50S ribosomal protein L32;protein_id=WP_041280512.1;transl_table=11 NC_009943.1 RefSeq gene 2535280 2535840 . - . ID=gene-DOLE_RS10725;Name=DOLE_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10725;old_locus_tag=Dole_2086 NC_009943.1 GeneMarkS-2+ CDS 2535280 2535840 . - 0 ID=cds-WP_012175502.1;Parent=gene-DOLE_RS10725;Dbxref=Genbank:WP_012175502.1;Name=WP_012175502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10725;product=hypothetical protein;protein_id=WP_012175502.1;transl_table=11 NC_009943.1 RefSeq gene 2535879 2537207 . - . ID=gene-DOLE_RS10730;Name=DOLE_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10730;old_locus_tag=Dole_2087 NC_009943.1 Protein Homology CDS 2535879 2537207 . - 0 ID=cds-WP_012175503.1;Parent=gene-DOLE_RS10730;Dbxref=Genbank:WP_012175503.1;Name=WP_012175503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071213.1;locus_tag=DOLE_RS10730;product=multiheme c-type cytochrome;protein_id=WP_012175503.1;transl_table=11 NC_009943.1 RefSeq gene 2537460 2538602 . - . ID=gene-DOLE_RS10735;Name=DOLE_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10735;old_locus_tag=Dole_2088 NC_009943.1 Protein Homology CDS 2537460 2538602 . - 0 ID=cds-WP_012175504.1;Parent=gene-DOLE_RS10735;Dbxref=Genbank:WP_012175504.1;Name=WP_012175504.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033611.0;locus_tag=DOLE_RS10735;product=SAVED domain-containing protein;protein_id=WP_012175504.1;transl_table=11 NC_009943.1 RefSeq gene 2539037 2540209 . - . ID=gene-DOLE_RS10745;Name=DOLE_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10745;old_locus_tag=Dole_2090 NC_009943.1 Protein Homology CDS 2539037 2540209 . - 0 ID=cds-WP_012175506.1;Parent=gene-DOLE_RS10745;Dbxref=Genbank:WP_012175506.1;Name=WP_012175506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037736.2;locus_tag=DOLE_RS10745;product=nucleotidyltransferase;protein_id=WP_012175506.1;transl_table=11 NC_009943.1 RefSeq gene 2540396 2541250 . + . ID=gene-DOLE_RS10750;Name=DOLE_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10750;old_locus_tag=Dole_2091 NC_009943.1 Protein Homology CDS 2540396 2541250 . + 0 ID=cds-WP_041280514.1;Parent=gene-DOLE_RS10750;Dbxref=Genbank:WP_041280514.1;Name=WP_041280514.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024676.2;locus_tag=DOLE_RS10750;product=WYL domain-containing protein;protein_id=WP_041280514.1;transl_table=11 NC_009943.1 RefSeq gene 2541255 2541914 . - . ID=gene-DOLE_RS10755;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=DOLE_RS10755;old_locus_tag=Dole_2092 NC_009943.1 Protein Homology CDS 2541255 2541914 . - 0 ID=cds-WP_041281083.1;Parent=gene-DOLE_RS10755;Dbxref=Genbank:WP_041281083.1;Name=WP_041281083.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589866.1;locus_tag=DOLE_RS10755;product=DNA repair protein RadC;protein_id=WP_041281083.1;transl_table=11 NC_009943.1 RefSeq gene 2542111 2543544 . - . ID=gene-DOLE_RS17470;Name=DOLE_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17470;old_locus_tag=Dole_2093 NC_009943.1 Protein Homology CDS 2542111 2543544 . - 0 ID=cds-WP_012175509.1;Parent=gene-DOLE_RS17470;Dbxref=Genbank:WP_012175509.1;Name=WP_012175509.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=DOLE_RS17470;product=restriction endonuclease subunit S;protein_id=WP_012175509.1;transl_table=11 NC_009943.1 RefSeq gene 2543541 2544569 . - . ID=gene-DOLE_RS10765;Name=DOLE_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10765;old_locus_tag=Dole_2094 NC_009943.1 Protein Homology CDS 2543541 2544569 . - 0 ID=cds-WP_012175510.1;Parent=gene-DOLE_RS10765;Dbxref=Genbank:WP_012175510.1;Name=WP_012175510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008798788.1;locus_tag=DOLE_RS10765;product=PDDEXK nuclease domain-containing protein;protein_id=WP_012175510.1;transl_table=11 NC_009943.1 RefSeq gene 2544566 2546011 . - . ID=gene-DOLE_RS10770;Name=DOLE_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10770;old_locus_tag=Dole_2095 NC_009943.1 Protein Homology CDS 2544566 2546011 . - 0 ID=cds-WP_012175511.1;Parent=gene-DOLE_RS10770;Dbxref=Genbank:WP_012175511.1;Name=WP_012175511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=DOLE_RS10770;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_012175511.1;transl_table=11 NC_009943.1 RefSeq gene 2546043 2548712 . - . ID=gene-DOLE_RS10775;Name=DOLE_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10775;old_locus_tag=Dole_2096 NC_009943.1 Protein Homology CDS 2546043 2548712 . - 0 ID=cds-WP_012175512.1;Parent=gene-DOLE_RS10775;Dbxref=Genbank:WP_012175512.1;Name=WP_012175512.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF037510.2;locus_tag=DOLE_RS10775;product=DEAD/DEAH box helicase family protein;protein_id=WP_012175512.1;transl_table=11 NC_009943.1 RefSeq gene 2548855 2549700 . - . ID=gene-DOLE_RS10780;Name=DOLE_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10780;old_locus_tag=Dole_2097 NC_009943.1 Protein Homology CDS 2548855 2549700 . - 0 ID=cds-WP_208596979.1;Parent=gene-DOLE_RS10780;Dbxref=Genbank:WP_208596979.1;Name=WP_208596979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013226.2;locus_tag=DOLE_RS10780;product=UbiA family prenyltransferase;protein_id=WP_208596979.1;transl_table=11 NC_009943.1 RefSeq gene 2550118 2550834 . + . ID=gene-DOLE_RS10785;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=DOLE_RS10785;old_locus_tag=Dole_2098 NC_009943.1 Protein Homology CDS 2550118 2550834 . + 0 ID=cds-WP_012175514.1;Parent=gene-DOLE_RS10785;Dbxref=Genbank:WP_012175514.1;Name=WP_012175514.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878487.1;locus_tag=DOLE_RS10785;product=DNA/RNA nuclease SfsA;protein_id=WP_012175514.1;transl_table=11 NC_009943.1 RefSeq gene 2550896 2551249 . + . ID=gene-DOLE_RS10790;Name=DOLE_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10790;old_locus_tag=Dole_2099 NC_009943.1 Protein Homology CDS 2550896 2551249 . + 0 ID=cds-WP_012175515.1;Parent=gene-DOLE_RS10790;Dbxref=Genbank:WP_012175515.1;Name=WP_012175515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877993.1;locus_tag=DOLE_RS10790;product=hypothetical protein;protein_id=WP_012175515.1;transl_table=11 NC_009943.1 RefSeq gene 2551255 2551914 . - . ID=gene-DOLE_RS10795;Name=DOLE_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10795;old_locus_tag=Dole_2100 NC_009943.1 GeneMarkS-2+ CDS 2551255 2551914 . - 0 ID=cds-WP_012175516.1;Parent=gene-DOLE_RS10795;Dbxref=Genbank:WP_012175516.1;Name=WP_012175516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10795;product=hypothetical protein;protein_id=WP_012175516.1;transl_table=11 NC_009943.1 RefSeq gene 2552019 2553911 . - . ID=gene-DOLE_RS10800;Name=DOLE_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10800;old_locus_tag=Dole_2101 NC_009943.1 Protein Homology CDS 2552019 2553911 . - 0 ID=cds-WP_232362697.1;Parent=gene-DOLE_RS10800;Dbxref=Genbank:WP_232362697.1;Name=WP_232362697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967081.1;locus_tag=DOLE_RS10800;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_232362697.1;transl_table=11 NC_009943.1 RefSeq gene 2553966 2554646 . - . ID=gene-DOLE_RS10805;Name=DOLE_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10805;old_locus_tag=Dole_2102 NC_009943.1 Protein Homology CDS 2553966 2554646 . - 0 ID=cds-WP_012175518.1;Parent=gene-DOLE_RS10805;Dbxref=Genbank:WP_012175518.1;Name=WP_012175518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875920.1;locus_tag=DOLE_RS10805;product=Crp/Fnr family transcriptional regulator;protein_id=WP_012175518.1;transl_table=11 NC_009943.1 RefSeq gene 2555051 2555785 . + . ID=gene-DOLE_RS10810;Name=DOLE_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10810;old_locus_tag=Dole_2103 NC_009943.1 Protein Homology CDS 2555051 2555785 . + 0 ID=cds-WP_012175519.1;Parent=gene-DOLE_RS10810;Dbxref=Genbank:WP_012175519.1;Name=WP_012175519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966852.1;locus_tag=DOLE_RS10810;product=HD domain-containing protein;protein_id=WP_012175519.1;transl_table=11 NC_009943.1 RefSeq gene 2555801 2556553 . + . ID=gene-DOLE_RS10815;Name=DOLE_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10815;old_locus_tag=Dole_2104 NC_009943.1 Protein Homology CDS 2555801 2556553 . + 0 ID=cds-WP_012175520.1;Parent=gene-DOLE_RS10815;Dbxref=Genbank:WP_012175520.1;Name=WP_012175520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905852.1;locus_tag=DOLE_RS10815;product=4Fe-4S binding protein;protein_id=WP_012175520.1;transl_table=11 NC_009943.1 RefSeq gene 2556736 2558502 . - . ID=gene-DOLE_RS10820;Name=DOLE_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10820;old_locus_tag=Dole_2105 NC_009943.1 Protein Homology CDS 2556736 2558502 . - 0 ID=cds-WP_012175521.1;Parent=gene-DOLE_RS10820;Dbxref=Genbank:WP_012175521.1;Name=WP_012175521.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025885.2;locus_tag=DOLE_RS10820;product=sigma 54-interacting transcriptional regulator;protein_id=WP_012175521.1;transl_table=11 NC_009943.1 RefSeq gene 2558731 2560452 . + . ID=gene-DOLE_RS10825;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=DOLE_RS10825;old_locus_tag=Dole_2106 NC_009943.1 Protein Homology CDS 2558731 2560452 . + 0 ID=cds-WP_012175522.1;Parent=gene-DOLE_RS10825;Dbxref=Genbank:WP_012175522.1;Name=WP_012175522.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR00644.1;locus_tag=DOLE_RS10825;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_012175522.1;transl_table=11 NC_009943.1 RefSeq gene 2560626 2561045 . + . ID=gene-DOLE_RS10830;Name=DOLE_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10830;old_locus_tag=Dole_2107 NC_009943.1 Protein Homology CDS 2560626 2561045 . + 0 ID=cds-WP_012175523.1;Parent=gene-DOLE_RS10830;Dbxref=Genbank:WP_012175523.1;Name=WP_012175523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949883.1;locus_tag=DOLE_RS10830;product=hypothetical protein;protein_id=WP_012175523.1;transl_table=11 NC_009943.1 RefSeq gene 2561118 2562119 . + . ID=gene-DOLE_RS10835;Name=DOLE_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10835;old_locus_tag=Dole_2108 NC_009943.1 Protein Homology CDS 2561118 2562119 . + 0 ID=cds-WP_012175524.1;Parent=gene-DOLE_RS10835;Dbxref=Genbank:WP_012175524.1;Name=WP_012175524.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002558.0;locus_tag=DOLE_RS10835;product=MBL fold metallo-hydrolase;protein_id=WP_012175524.1;transl_table=11 NC_009943.1 RefSeq gene 2562116 2562643 . + . ID=gene-DOLE_RS10840;Name=DOLE_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10840;old_locus_tag=Dole_2109 NC_009943.1 Protein Homology CDS 2562116 2562643 . + 0 ID=cds-WP_012175525.1;Parent=gene-DOLE_RS10840;Dbxref=Genbank:WP_012175525.1;Name=WP_012175525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012579.2;locus_tag=DOLE_RS10840;product=PTS sugar transporter subunit IIA;protein_id=WP_012175525.1;transl_table=11 NC_009943.1 RefSeq gene 2562757 2563755 . + . ID=gene-DOLE_RS10845;Name=DOLE_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10845;old_locus_tag=Dole_2110 NC_009943.1 Protein Homology CDS 2562757 2563755 . + 0 ID=cds-WP_012175526.1;Parent=gene-DOLE_RS10845;Dbxref=Genbank:WP_012175526.1;Name=WP_012175526.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948192.1;locus_tag=DOLE_RS10845;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_012175526.1;transl_table=11 NC_009943.1 RefSeq gene 2563963 2565297 . + . ID=gene-DOLE_RS10850;Name=DOLE_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10850;old_locus_tag=Dole_2111 NC_009943.1 Protein Homology CDS 2563963 2565297 . + 0 ID=cds-WP_012175527.1;Parent=gene-DOLE_RS10850;Dbxref=Genbank:WP_012175527.1;Name=WP_012175527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948193.1;locus_tag=DOLE_RS10850;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_012175527.1;transl_table=11 NC_009943.1 RefSeq gene 2565326 2565721 . + . ID=gene-DOLE_RS10855;Name=DOLE_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10855;old_locus_tag=Dole_2112 NC_009943.1 Protein Homology CDS 2565326 2565721 . + 0 ID=cds-WP_208597005.1;Parent=gene-DOLE_RS10855;Dbxref=Genbank:WP_208597005.1;Name=WP_208597005.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073591.1;locus_tag=DOLE_RS10855;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_208597005.1;transl_table=11 NC_009943.1 RefSeq gene 2566289 2567692 . + . ID=gene-DOLE_RS10860;Name=DOLE_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10860;old_locus_tag=Dole_2113 NC_009943.1 Protein Homology CDS 2566289 2567692 . + 0 ID=cds-WP_012175529.1;Parent=gene-DOLE_RS10860;Dbxref=Genbank:WP_012175529.1;Name=WP_012175529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956516.1;locus_tag=DOLE_RS10860;product=amidophosphoribosyltransferase;protein_id=WP_012175529.1;transl_table=11 NC_009943.1 RefSeq gene 2567849 2568457 . + . ID=gene-DOLE_RS10865;Name=DOLE_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10865;old_locus_tag=Dole_2114 NC_009943.1 Protein Homology CDS 2567849 2568457 . + 0 ID=cds-WP_012175530.1;Parent=gene-DOLE_RS10865;Dbxref=Genbank:WP_012175530.1;Name=WP_012175530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877549.1;locus_tag=DOLE_RS10865;product=cytidylate kinase-like family protein;protein_id=WP_012175530.1;transl_table=11 NC_009943.1 RefSeq gene 2568459 2570303 . - . ID=gene-DOLE_RS10870;Name=DOLE_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10870;old_locus_tag=Dole_2115 NC_009943.1 Protein Homology CDS 2568459 2570303 . - 0 ID=cds-WP_041281088.1;Parent=gene-DOLE_RS10870;Dbxref=Genbank:WP_041281088.1;Name=WP_041281088.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875839.1;locus_tag=DOLE_RS10870;product=UvrD-helicase domain-containing protein;protein_id=WP_041281088.1;transl_table=11 NC_009943.1 RefSeq gene 2570684 2571016 . + . ID=gene-DOLE_RS10875;Name=DOLE_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10875;old_locus_tag=Dole_2116 NC_009943.1 Protein Homology CDS 2570684 2571016 . + 0 ID=cds-WP_012175532.1;Parent=gene-DOLE_RS10875;Dbxref=Genbank:WP_012175532.1;Name=WP_012175532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020426.2;locus_tag=DOLE_RS10875;product=DUF1820 family protein;protein_id=WP_012175532.1;transl_table=11 NC_009943.1 RefSeq gene 2571066 2572307 . + . ID=gene-DOLE_RS10880;Name=DOLE_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10880;old_locus_tag=Dole_2117 NC_009943.1 Protein Homology CDS 2571066 2572307 . + 0 ID=cds-WP_012175533.1;Parent=gene-DOLE_RS10880;Dbxref=Genbank:WP_012175533.1;Name=WP_012175533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020590267.1;locus_tag=DOLE_RS10880;product=nucleoside:proton symporter;protein_id=WP_012175533.1;transl_table=11 NC_009943.1 RefSeq gene 2572650 2574491 . - . ID=gene-DOLE_RS10885;Name=DOLE_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10885;old_locus_tag=Dole_2118 NC_009943.1 Protein Homology CDS 2572650 2574491 . - 0 ID=cds-WP_012175534.1;Parent=gene-DOLE_RS10885;Dbxref=Genbank:WP_012175534.1;Name=WP_012175534.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=DOLE_RS10885;product=AMP-binding protein;protein_id=WP_012175534.1;transl_table=11 NC_009943.1 RefSeq gene 2574519 2574815 . - . ID=gene-DOLE_RS10890;Name=DOLE_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10890;old_locus_tag=Dole_2119 NC_009943.1 Protein Homology CDS 2574519 2574815 . - 0 ID=cds-WP_012175535.1;Parent=gene-DOLE_RS10890;Dbxref=Genbank:WP_012175535.1;Name=WP_012175535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404458.1;locus_tag=DOLE_RS10890;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012175535.1;transl_table=11 NC_009943.1 RefSeq gene 2574812 2575093 . - . ID=gene-DOLE_RS10895;Name=DOLE_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10895;old_locus_tag=Dole_2120 NC_009943.1 Protein Homology CDS 2574812 2575093 . - 0 ID=cds-WP_012175536.1;Parent=gene-DOLE_RS10895;Dbxref=Genbank:WP_012175536.1;Name=WP_012175536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404459.1;locus_tag=DOLE_RS10895;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_012175536.1;transl_table=11 NC_009943.1 RefSeq gene 2575505 2576485 . + . ID=gene-DOLE_RS10900;Name=DOLE_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10900;old_locus_tag=Dole_2121 NC_009943.1 GeneMarkS-2+ CDS 2575505 2576485 . + 0 ID=cds-WP_012175537.1;Parent=gene-DOLE_RS10900;Dbxref=Genbank:WP_012175537.1;Name=WP_012175537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10900;product=radical SAM domain-containing protein;protein_id=WP_012175537.1;transl_table=11 NC_009943.1 RefSeq gene 2576789 2578267 . + . ID=gene-DOLE_RS10905;Name=DOLE_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10905;old_locus_tag=Dole_2122 NC_009943.1 Protein Homology CDS 2576789 2578267 . + 0 ID=cds-WP_012175538.1;Parent=gene-DOLE_RS10905;Dbxref=Genbank:WP_012175538.1;Name=WP_012175538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876661.1;locus_tag=DOLE_RS10905;product=30S ribosomal protein S1;protein_id=WP_012175538.1;transl_table=11 NC_009943.1 RefSeq gene 2578326 2578805 . + . ID=gene-DOLE_RS10910;Name=DOLE_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10910;old_locus_tag=Dole_2123 NC_009943.1 Protein Homology CDS 2578326 2578805 . + 0 ID=cds-WP_012175539.1;Parent=gene-DOLE_RS10910;Dbxref=Genbank:WP_012175539.1;Name=WP_012175539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875034.1;locus_tag=DOLE_RS10910;product=CBS domain-containing protein;protein_id=WP_012175539.1;transl_table=11 NC_009943.1 RefSeq gene 2578812 2580332 . - . ID=gene-DOLE_RS10915;Name=DOLE_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10915;old_locus_tag=Dole_2124 NC_009943.1 Protein Homology CDS 2578812 2580332 . - 0 ID=cds-WP_041280516.1;Parent=gene-DOLE_RS10915;Dbxref=Genbank:WP_041280516.1;Name=WP_041280516.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03605.1;locus_tag=DOLE_RS10915;product=SagB/ThcOx family dehydrogenase;protein_id=WP_041280516.1;transl_table=11 NC_009943.1 RefSeq gene 2580507 2581943 . + . ID=gene-DOLE_RS10920;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=DOLE_RS10920;old_locus_tag=Dole_2125 NC_009943.1 Protein Homology CDS 2580507 2581943 . + 0 ID=cds-WP_012175541.1;Parent=gene-DOLE_RS10920;Dbxref=Genbank:WP_012175541.1;Name=WP_012175541.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: protein motif:HMM:NF004491.0;locus_tag=DOLE_RS10920;product=pyruvate kinase;protein_id=WP_012175541.1;transl_table=11 NC_009943.1 RefSeq gene 2582022 2582441 . - . ID=gene-DOLE_RS10925;Name=DOLE_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10925;old_locus_tag=Dole_2126 NC_009943.1 Protein Homology CDS 2582022 2582441 . - 0 ID=cds-WP_012175542.1;Parent=gene-DOLE_RS10925;Dbxref=Genbank:WP_012175542.1;Name=WP_012175542.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS10925;product=response regulator;protein_id=WP_012175542.1;transl_table=11 NC_009943.1 RefSeq gene 2582680 2584131 . - . ID=gene-DOLE_RS10930;Name=DOLE_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10930;old_locus_tag=Dole_2127 NC_009943.1 Protein Homology CDS 2582680 2584131 . - 0 ID=cds-WP_012175543.1;Parent=gene-DOLE_RS10930;Dbxref=Genbank:WP_012175543.1;Name=WP_012175543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS10930;product=ATP-binding protein;protein_id=WP_012175543.1;transl_table=11 NC_009943.1 RefSeq gene 2584314 2585639 . - . ID=gene-DOLE_RS10935;Name=DOLE_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10935;old_locus_tag=Dole_2128 NC_009943.1 Protein Homology CDS 2584314 2585639 . - 0 ID=cds-WP_012175544.1;Parent=gene-DOLE_RS10935;Dbxref=Genbank:WP_012175544.1;Name=WP_012175544.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015948.2;locus_tag=DOLE_RS10935;product=DUF362 domain-containing protein;protein_id=WP_012175544.1;transl_table=11 NC_009943.1 RefSeq gene 2585669 2586190 . - . ID=gene-DOLE_RS10940;Name=DOLE_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10940;old_locus_tag=Dole_2129 NC_009943.1 GeneMarkS-2+ CDS 2585669 2586190 . - 0 ID=cds-WP_012175545.1;Parent=gene-DOLE_RS10940;Dbxref=Genbank:WP_012175545.1;Name=WP_012175545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10940;product=hypothetical protein;protein_id=WP_012175545.1;transl_table=11 NC_009943.1 RefSeq gene 2586193 2586807 . - . ID=gene-DOLE_RS10945;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=DOLE_RS10945;old_locus_tag=Dole_2130 NC_009943.1 Protein Homology CDS 2586193 2586807 . - 0 ID=cds-WP_012175546.1;Parent=gene-DOLE_RS10945;Dbxref=Genbank:WP_012175546.1;Name=WP_012175546.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878189.1;locus_tag=DOLE_RS10945;product=recombination-associated protein RdgC;protein_id=WP_012175546.1;transl_table=11 NC_009943.1 RefSeq gene 2587140 2587766 . - . ID=gene-DOLE_RS10950;Name=DOLE_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10950;old_locus_tag=Dole_2131 NC_009943.1 Protein Homology CDS 2587140 2587766 . - 0 ID=cds-WP_012175547.1;Parent=gene-DOLE_RS10950;Dbxref=Genbank:WP_012175547.1;Name=WP_012175547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875383.1;locus_tag=DOLE_RS10950;product=MBL fold metallo-hydrolase;protein_id=WP_012175547.1;transl_table=11 NC_009943.1 RefSeq gene 2587981 2588718 . - . ID=gene-DOLE_RS10955;Name=DOLE_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10955;old_locus_tag=Dole_2132 NC_009943.1 Protein Homology CDS 2587981 2588718 . - 0 ID=cds-WP_012175548.1;Parent=gene-DOLE_RS10955;Dbxref=Genbank:WP_012175548.1;Name=WP_012175548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947646.1;locus_tag=DOLE_RS10955;product=ABC transporter ATP-binding protein;protein_id=WP_012175548.1;transl_table=11 NC_009943.1 RefSeq gene 2588693 2590072 . - . ID=gene-DOLE_RS10960;Name=DOLE_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10960;old_locus_tag=Dole_2133 NC_009943.1 Protein Homology CDS 2588693 2590072 . - 0 ID=cds-WP_012175549.1;Parent=gene-DOLE_RS10960;Dbxref=Genbank:WP_012175549.1;Name=WP_012175549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587392.1;locus_tag=DOLE_RS10960;product=replication-associated recombination protein A;protein_id=WP_012175549.1;transl_table=11 NC_009943.1 RefSeq gene 2590181 2591557 . - . ID=gene-DOLE_RS10965;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=DOLE_RS10965;old_locus_tag=Dole_2134 NC_009943.1 Protein Homology CDS 2590181 2591557 . - 0 ID=cds-WP_012175550.1;Parent=gene-DOLE_RS10965;Dbxref=Genbank:WP_012175550.1;Name=WP_012175550.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175550.1;locus_tag=DOLE_RS10965;product=ribosome biogenesis GTPase Der;protein_id=WP_012175550.1;transl_table=11 NC_009943.1 RefSeq gene 2591744 2593000 . - . ID=gene-DOLE_RS10970;Name=DOLE_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10970;old_locus_tag=Dole_2135 NC_009943.1 Protein Homology CDS 2591744 2593000 . - 0 ID=cds-WP_012175551.1;Parent=gene-DOLE_RS10970;Dbxref=Genbank:WP_012175551.1;Name=WP_012175551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725005.1;locus_tag=DOLE_RS10970;product=diaminopimelate decarboxylase;protein_id=WP_012175551.1;transl_table=11 NC_009943.1 RefSeq gene 2593168 2593641 . + . ID=gene-DOLE_RS10975;Name=DOLE_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10975;old_locus_tag=Dole_2136 NC_009943.1 Protein Homology CDS 2593168 2593641 . + 0 ID=cds-WP_012175552.1;Parent=gene-DOLE_RS10975;Dbxref=Genbank:WP_012175552.1;Name=WP_012175552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=DOLE_RS10975;product=GNAT family N-acetyltransferase;protein_id=WP_012175552.1;transl_table=11 NC_009943.1 RefSeq gene 2593645 2594526 . + . ID=gene-DOLE_RS10980;Name=DOLE_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10980;old_locus_tag=Dole_2137 NC_009943.1 Protein Homology CDS 2593645 2594526 . + 0 ID=cds-WP_012175553.1;Parent=gene-DOLE_RS10980;Dbxref=Genbank:WP_012175553.1;Name=WP_012175553.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017652.2;locus_tag=DOLE_RS10980;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_012175553.1;transl_table=11 NC_009943.1 RefSeq gene 2594549 2595172 . - . ID=gene-DOLE_RS10985;Name=DOLE_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10985;old_locus_tag=Dole_2138 NC_009943.1 GeneMarkS-2+ CDS 2594549 2595172 . - 0 ID=cds-WP_012175554.1;Parent=gene-DOLE_RS10985;Dbxref=Genbank:WP_012175554.1;Name=WP_012175554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS10985;product=hypothetical protein;protein_id=WP_012175554.1;transl_table=11 NC_009943.1 RefSeq gene 2595445 2598495 . + . ID=gene-DOLE_RS10990;Name=DOLE_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10990;old_locus_tag=Dole_2139 NC_009943.1 Protein Homology CDS 2595445 2598495 . + 0 ID=cds-WP_041280518.1;Parent=gene-DOLE_RS10990;Dbxref=Genbank:WP_041280518.1;Name=WP_041280518.1;Ontology_term=GO:0006508,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013524.2;locus_tag=DOLE_RS10990;product=C25 family cysteine peptidase;protein_id=WP_041280518.1;transl_table=11 NC_009943.1 RefSeq gene 2598604 2600394 . + . ID=gene-DOLE_RS10995;Name=DOLE_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS10995;old_locus_tag=Dole_2140 NC_009943.1 Protein Homology CDS 2598604 2600394 . + 0 ID=cds-WP_167320873.1;Parent=gene-DOLE_RS10995;Dbxref=Genbank:WP_167320873.1;Name=WP_167320873.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS10995;product=radical SAM protein;protein_id=WP_167320873.1;transl_table=11 NC_009943.1 RefSeq gene 2600421 2601026 . - . ID=gene-DOLE_RS11000;Name=DOLE_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11000;old_locus_tag=Dole_2141 NC_009943.1 Protein Homology CDS 2600421 2601026 . - 0 ID=cds-WP_012175557.1;Parent=gene-DOLE_RS11000;Dbxref=Genbank:WP_012175557.1;Name=WP_012175557.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013695.2;locus_tag=DOLE_RS11000;product=cation transporter;protein_id=WP_012175557.1;transl_table=11 NC_009943.1 RefSeq gene 2601043 2601699 . - . ID=gene-DOLE_RS11005;Name=DOLE_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11005;old_locus_tag=Dole_2142 NC_009943.1 Protein Homology CDS 2601043 2601699 . - 0 ID=cds-WP_012175558.1;Parent=gene-DOLE_RS11005;Dbxref=Genbank:WP_012175558.1;Name=WP_012175558.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024258.2;locus_tag=DOLE_RS11005;product=metallophosphoesterase family protein;protein_id=WP_012175558.1;transl_table=11 NC_009943.1 RefSeq gene 2601748 2603013 . - . ID=gene-DOLE_RS11010;Name=DOLE_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11010;old_locus_tag=Dole_2143 NC_009943.1 Protein Homology CDS 2601748 2603013 . - 0 ID=cds-WP_012175559.1;Parent=gene-DOLE_RS11010;Dbxref=Genbank:WP_012175559.1;Name=WP_012175559.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=DOLE_RS11010;product=NADH:flavin oxidoreductase/NADH oxidase family protein;protein_id=WP_012175559.1;transl_table=11 NC_009943.1 RefSeq gene 2603032 2603475 . - . ID=gene-DOLE_RS11015;Name=DOLE_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11015;old_locus_tag=Dole_2144 NC_009943.1 Protein Homology CDS 2603032 2603475 . - 0 ID=cds-WP_012175560.1;Parent=gene-DOLE_RS11015;Dbxref=Genbank:WP_012175560.1;Name=WP_012175560.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013412.2;locus_tag=DOLE_RS11015;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_012175560.1;transl_table=11 NC_009943.1 RefSeq gene 2603603 2604088 . + . ID=gene-DOLE_RS11020;Name=DOLE_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11020;old_locus_tag=Dole_2145 NC_009943.1 Protein Homology CDS 2603603 2604088 . + 0 ID=cds-WP_012175561.1;Parent=gene-DOLE_RS11020;Dbxref=Genbank:WP_012175561.1;Name=WP_012175561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875203.1;locus_tag=DOLE_RS11020;product=TIGR00725 family protein;protein_id=WP_012175561.1;transl_table=11 NC_009943.1 RefSeq gene 2604124 2605326 . - . ID=gene-DOLE_RS11025;Name=DOLE_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11025;old_locus_tag=Dole_2146 NC_009943.1 GeneMarkS-2+ CDS 2604124 2605326 . - 0 ID=cds-WP_012175562.1;Parent=gene-DOLE_RS11025;Dbxref=Genbank:WP_012175562.1;Name=WP_012175562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11025;product=hypothetical protein;protein_id=WP_012175562.1;transl_table=11 NC_009943.1 RefSeq gene 2605570 2606256 . - . ID=gene-DOLE_RS11030;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=DOLE_RS11030;old_locus_tag=Dole_2147 NC_009943.1 Protein Homology CDS 2605570 2606256 . - 0 ID=cds-WP_012175563.1;Parent=gene-DOLE_RS11030;Dbxref=Genbank:WP_012175563.1;Name=WP_012175563.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: protein motif:HMM:TIGR00453.1;locus_tag=DOLE_RS11030;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_012175563.1;transl_table=11 NC_009943.1 RefSeq gene 2606328 2607638 . - . ID=gene-DOLE_RS11035;Name=DOLE_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11035;old_locus_tag=Dole_2148 NC_009943.1 Protein Homology CDS 2606328 2607638 . - 0 ID=cds-WP_012175564.1;Parent=gene-DOLE_RS11035;Dbxref=Genbank:WP_012175564.1;Name=WP_012175564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904782.1;locus_tag=DOLE_RS11035;product=HPr family phosphocarrier protein;protein_id=WP_012175564.1;transl_table=11 NC_009943.1 RefSeq gene 2607688 2608080 . - . ID=gene-DOLE_RS17765;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=DOLE_RS17765;old_locus_tag=Dole_R0032 NC_009943.1 cmsearch RNase_P_RNA 2607688 2608080 . - . ID=rna-DOLE_RS17765;Parent=gene-DOLE_RS17765;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS17765;product=RNase P RNA component class A NC_009943.1 cmsearch exon 2607688 2608080 . - . ID=exon-DOLE_RS17765-1;Parent=rna-DOLE_RS17765;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DOLE_RS17765;product=RNase P RNA component class A NC_009943.1 RefSeq gene 2608097 2608828 . - . ID=gene-DOLE_RS11040;Name=DOLE_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11040;old_locus_tag=Dole_2149 NC_009943.1 Protein Homology CDS 2608097 2608828 . - 0 ID=cds-WP_012175565.1;Parent=gene-DOLE_RS11040;Dbxref=Genbank:WP_012175565.1;Name=WP_012175565.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014630.2;locus_tag=DOLE_RS11040;product=C4-type zinc ribbon domain-containing protein;protein_id=WP_012175565.1;transl_table=11 NC_009943.1 RefSeq gene 2608856 2609977 . - . ID=gene-DOLE_RS11045;Name=DOLE_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11045;old_locus_tag=Dole_2150 NC_009943.1 Protein Homology CDS 2608856 2609977 . - 0 ID=cds-WP_012175566.1;Parent=gene-DOLE_RS11045;Dbxref=Genbank:WP_012175566.1;Name=WP_012175566.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: protein motif:HMM:NF013909.2;locus_tag=DOLE_RS11045;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_012175566.1;transl_table=11 NC_009943.1 RefSeq gene 2610192 2610264 . - . ID=gene-DOLE_RS11050;Name=DOLE_RS11050;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS11050;old_locus_tag=Dole_R0033 NC_009943.1 tRNAscan-SE tRNA 2610192 2610264 . - . ID=rna-DOLE_RS11050;Parent=gene-DOLE_RS11050;anticodon=(pos:complement(2610229..2610231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS11050;product=tRNA-Ile NC_009943.1 tRNAscan-SE exon 2610192 2610264 . - . ID=exon-DOLE_RS11050-1;Parent=rna-DOLE_RS11050;anticodon=(pos:complement(2610229..2610231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS11050;product=tRNA-Ile NC_009943.1 RefSeq gene 2610400 2612616 . - . ID=gene-DOLE_RS11055;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=DOLE_RS11055;old_locus_tag=Dole_2151 NC_009943.1 Protein Homology CDS 2610400 2612616 . - 0 ID=cds-WP_012175567.1;Parent=gene-DOLE_RS11055;Dbxref=Genbank:WP_012175567.1;Name=WP_012175567.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=DOLE_RS11055;product=RNA polymerase sigma factor RpoD;protein_id=WP_012175567.1;transl_table=11 NC_009943.1 RefSeq gene 2612648 2613007 . - . ID=gene-DOLE_RS11065;Name=DOLE_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11065;old_locus_tag=Dole_2152 NC_009943.1 GeneMarkS-2+ CDS 2612648 2613007 . - 0 ID=cds-WP_012175568.1;Parent=gene-DOLE_RS11065;Dbxref=Genbank:WP_012175568.1;Name=WP_012175568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11065;product=hypothetical protein;protein_id=WP_012175568.1;transl_table=11 NC_009943.1 RefSeq gene 2613004 2614845 . - . ID=gene-DOLE_RS11070;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=DOLE_RS11070;old_locus_tag=Dole_2153 NC_009943.1 Protein Homology CDS 2613004 2614845 . - 0 ID=cds-WP_012175569.1;Parent=gene-DOLE_RS11070;Dbxref=Genbank:WP_012175569.1;Name=WP_012175569.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: protein motif:HMM:TIGR01391.1;locus_tag=DOLE_RS11070;product=DNA primase;protein_id=WP_012175569.1;transl_table=11 NC_009943.1 RefSeq gene 2614848 2615603 . - . ID=gene-DOLE_RS11075;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=DOLE_RS11075;old_locus_tag=Dole_2154 NC_009943.1 Protein Homology CDS 2614848 2615603 . - 0 ID=cds-WP_012175570.1;Parent=gene-DOLE_RS11075;Dbxref=Genbank:WP_012175570.1;Name=WP_012175570.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175570.1;locus_tag=DOLE_RS11075;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_012175570.1;transl_table=11 NC_009943.1 RefSeq gene 2615621 2616208 . - . ID=gene-DOLE_RS11080;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=DOLE_RS11080;old_locus_tag=Dole_2155 NC_009943.1 Protein Homology CDS 2615621 2616208 . - 0 ID=cds-WP_012175571.1;Parent=gene-DOLE_RS11080;Dbxref=Genbank:WP_012175571.1;Name=WP_012175571.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175571.1;locus_tag=DOLE_RS11080;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_012175571.1;transl_table=11 NC_009943.1 RefSeq gene 2616303 2616378 . - . ID=gene-DOLE_RS11085;Name=DOLE_RS11085;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS11085;old_locus_tag=Dole_R0034 NC_009943.1 tRNAscan-SE tRNA 2616303 2616378 . - . ID=rna-DOLE_RS11085;Parent=gene-DOLE_RS11085;anticodon=(pos:complement(2616343..2616345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS11085;product=tRNA-Ala NC_009943.1 tRNAscan-SE exon 2616303 2616378 . - . ID=exon-DOLE_RS11085-1;Parent=rna-DOLE_RS11085;anticodon=(pos:complement(2616343..2616345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS11085;product=tRNA-Ala NC_009943.1 RefSeq gene 2616755 2617873 . + . ID=gene-DOLE_RS11090;Name=DOLE_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11090;old_locus_tag=Dole_2157 NC_009943.1 Protein Homology CDS 2616755 2617873 . + 0 ID=cds-WP_012175573.1;Parent=gene-DOLE_RS11090;Dbxref=Genbank:WP_012175573.1;Name=WP_012175573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS11090;product=GGDEF domain-containing protein;protein_id=WP_012175573.1;transl_table=11 NC_009943.1 RefSeq gene 2617892 2618788 . - . ID=gene-DOLE_RS11095;Name=DOLE_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11095;old_locus_tag=Dole_2158 NC_009943.1 Protein Homology CDS 2617892 2618788 . - 0 ID=cds-WP_012175574.1;Parent=gene-DOLE_RS11095;Dbxref=Genbank:WP_012175574.1;Name=WP_012175574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877010.1;locus_tag=DOLE_RS11095;product=selenium metabolism-associated LysR family transcriptional regulator;protein_id=WP_012175574.1;transl_table=11 NC_009943.1 RefSeq gene 2618915 2619508 . + . ID=gene-DOLE_RS11100;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=DOLE_RS11100;old_locus_tag=Dole_2159 NC_009943.1 Protein Homology CDS 2618915 2619508 . + 0 ID=cds-WP_012175575.1;Parent=gene-DOLE_RS11100;Dbxref=Genbank:WP_012175575.1;Name=WP_012175575.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610810.1;locus_tag=DOLE_RS11100;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_012175575.1;transl_table=11 NC_009943.1 RefSeq gene 2619688 2620941 . + . ID=gene-DOLE_RS11105;Name=DOLE_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11105;old_locus_tag=Dole_2160 NC_009943.1 Protein Homology CDS 2619688 2620941 . + 0 ID=cds-WP_012175576.1;Parent=gene-DOLE_RS11105;Dbxref=Genbank:WP_012175576.1;Name=WP_012175576.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948364.1;locus_tag=DOLE_RS11105;product=acetyl-CoA C-acyltransferase;protein_id=WP_012175576.1;transl_table=11 NC_009943.1 RefSeq gene 2621259 2621981 . + . ID=gene-DOLE_RS18605;Name=prxU;gbkey=Gene;gene=prxU;gene_biotype=protein_coding;locus_tag=DOLE_RS18605 NC_009943.1 Protein Homology CDS 2621259 2621981 . + 0 ID=cds-WP_232362698.1;Parent=gene-DOLE_RS18605;Dbxref=Genbank:WP_232362698.1;Name=WP_232362698.1;Note=Most members of this family contain a selenocysteine.;Ontology_term=GO:0051920;gbkey=CDS;gene=prxU;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_232362698.1;locus_tag=DOLE_RS18605;product=thioredoxin-dependent peroxiredoxin;protein_id=WP_232362698.1;transl_except=(pos:2621511..2621513%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 2622124 2622669 . + . ID=gene-DOLE_RS17475;Name=DOLE_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17475;old_locus_tag=Dole_2163 NC_009943.1 Protein Homology CDS 2622124 2622669 . + 0 ID=cds-WP_012175579.1;Parent=gene-DOLE_RS17475;Dbxref=Genbank:WP_012175579.1;Name=WP_012175579.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021363.2;locus_tag=DOLE_RS17475;product=DUF2062 domain-containing protein;protein_id=WP_012175579.1;transl_table=11 NC_009943.1 RefSeq gene 2622866 2624683 . - . ID=gene-DOLE_RS11125;Name=DOLE_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11125;old_locus_tag=Dole_2164 NC_009943.1 Protein Homology CDS 2622866 2624683 . - 0 ID=cds-WP_012175580.1;Parent=gene-DOLE_RS11125;Dbxref=Genbank:WP_012175580.1;Name=WP_012175580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663239.1;locus_tag=DOLE_RS11125;product=acyl-CoA dehydrogenase;protein_id=WP_012175580.1;transl_table=11 NC_009943.1 RefSeq gene 2624973 2626049 . + . ID=gene-DOLE_RS17480;Name=DOLE_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17480;old_locus_tag=Dole_2165 NC_009943.1 Protein Homology CDS 2624973 2626049 . + 0 ID=cds-WP_052294296.1;Parent=gene-DOLE_RS17480;Dbxref=Genbank:WP_052294296.1;Name=WP_052294296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS17480;product=GGDEF domain-containing protein;protein_id=WP_052294296.1;transl_table=11 NC_009943.1 RefSeq gene 2626080 2626742 . + . ID=gene-DOLE_RS11135;Name=DOLE_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11135;old_locus_tag=Dole_2166 NC_009943.1 Protein Homology CDS 2626080 2626742 . + 0 ID=cds-WP_012175582.1;Parent=gene-DOLE_RS11135;Dbxref=Genbank:WP_012175582.1;Name=WP_012175582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074204.1;locus_tag=DOLE_RS11135;product=endonuclease III;protein_id=WP_012175582.1;transl_table=11 NC_009943.1 RefSeq gene 2626757 2628085 . + . ID=gene-DOLE_RS11140;Name=DOLE_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11140;old_locus_tag=Dole_2167 NC_009943.1 Protein Homology CDS 2626757 2628085 . + 0 ID=cds-WP_012175583.1;Parent=gene-DOLE_RS11140;Dbxref=Genbank:WP_012175583.1;Name=WP_012175583.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: protein motif:HMM:TIGR03026.1;locus_tag=DOLE_RS11140;product=nucleotide sugar dehydrogenase;protein_id=WP_012175583.1;transl_table=11 NC_009943.1 RefSeq gene 2628146 2628820 . + . ID=gene-DOLE_RS11145;Name=DOLE_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11145;old_locus_tag=Dole_2168 NC_009943.1 Protein Homology CDS 2628146 2628820 . + 0 ID=cds-WP_012175584.1;Parent=gene-DOLE_RS11145;Dbxref=Genbank:WP_012175584.1;Name=WP_012175584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948007.1;locus_tag=DOLE_RS11145;product=nitroreductase;protein_id=WP_012175584.1;transl_table=11 NC_009943.1 RefSeq gene 2628813 2629598 . + . ID=gene-DOLE_RS11150;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=DOLE_RS11150;old_locus_tag=Dole_2169 NC_009943.1 Protein Homology CDS 2628813 2629598 . + 0 ID=cds-WP_232362699.1;Parent=gene-DOLE_RS11150;Dbxref=Genbank:WP_232362699.1;Name=WP_232362699.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875837.1;locus_tag=DOLE_RS11150;product=peptidoglycan editing factor PgeF;protein_id=WP_232362699.1;transl_table=11 NC_009943.1 RefSeq gene 2629705 2630577 . + . ID=gene-DOLE_RS11155;Name=DOLE_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11155;old_locus_tag=Dole_2170 NC_009943.1 Protein Homology CDS 2629705 2630577 . + 0 ID=cds-WP_012175586.1;Parent=gene-DOLE_RS11155;Dbxref=Genbank:WP_012175586.1;Name=WP_012175586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948098.1;locus_tag=DOLE_RS11155;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_012175586.1;transl_table=11 NC_009943.1 RefSeq gene 2630753 2636998 . - . ID=gene-DOLE_RS11160;Name=DOLE_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11160;old_locus_tag=Dole_2171 NC_009943.1 Protein Homology CDS 2630753 2636998 . - 0 ID=cds-WP_083766591.1;Parent=gene-DOLE_RS11160;Dbxref=Genbank:WP_083766591.1;Name=WP_083766591.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019325.2;locus_tag=DOLE_RS11160;product=InlB B-repeat-containing protein;protein_id=WP_083766591.1;transl_table=11 NC_009943.1 RefSeq gene 2637053 2638006 . - . ID=gene-DOLE_RS11165;Name=DOLE_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11165;old_locus_tag=Dole_2172 NC_009943.1 GeneMarkS-2+ CDS 2637053 2638006 . - 0 ID=cds-WP_012175588.1;Parent=gene-DOLE_RS11165;Dbxref=Genbank:WP_012175588.1;Name=WP_012175588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11165;product=hypothetical protein;protein_id=WP_012175588.1;transl_table=11 NC_009943.1 RefSeq gene 2638218 2639027 . - . ID=gene-DOLE_RS17485;Name=DOLE_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17485;old_locus_tag=Dole_2173 NC_009943.1 Protein Homology CDS 2638218 2639027 . - 0 ID=cds-WP_012175589.1;Parent=gene-DOLE_RS17485;Dbxref=Genbank:WP_012175589.1;Name=WP_012175589.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=DOLE_RS17485;product=helix-turn-helix transcriptional regulator;protein_id=WP_012175589.1;transl_table=11 NC_009943.1 RefSeq gene 2639570 2640994 . + . ID=gene-DOLE_RS11175;Name=DOLE_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11175;old_locus_tag=Dole_2174 NC_009943.1 Protein Homology CDS 2639570 2640994 . + 0 ID=cds-WP_012175590.1;Parent=gene-DOLE_RS11175;Dbxref=Genbank:WP_012175590.1;Name=WP_012175590.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS11175;product=response regulator;protein_id=WP_012175590.1;transl_table=11 NC_009943.1 RefSeq gene 2641143 2641442 . + . ID=gene-DOLE_RS18220;Name=DOLE_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18220 NC_009943.1 GeneMarkS-2+ CDS 2641143 2641442 . + 0 ID=cds-WP_153304415.1;Parent=gene-DOLE_RS18220;Dbxref=Genbank:WP_153304415.1;Name=WP_153304415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18220;product=hypothetical protein;protein_id=WP_153304415.1;transl_table=11 NC_009943.1 RefSeq gene 2641546 2642202 . - . ID=gene-DOLE_RS17490;Name=DOLE_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17490;old_locus_tag=Dole_2175 NC_009943.1 Protein Homology CDS 2641546 2642202 . - 0 ID=cds-WP_012175591.1;Parent=gene-DOLE_RS17490;Dbxref=Genbank:WP_012175591.1;Name=WP_012175591.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS17490;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175591.1;transl_table=11 NC_009943.1 RefSeq gene 2642259 2644019 . - . ID=gene-DOLE_RS11185;Name=DOLE_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11185;old_locus_tag=Dole_2176 NC_009943.1 Protein Homology CDS 2642259 2644019 . - 0 ID=cds-WP_041280524.1;Parent=gene-DOLE_RS11185;Dbxref=Genbank:WP_041280524.1;Name=WP_041280524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947921.1;locus_tag=DOLE_RS11185;product=DUF1446 domain-containing protein;protein_id=WP_041280524.1;transl_table=11 NC_009943.1 RefSeq gene 2644053 2644820 . - . ID=gene-DOLE_RS11190;Name=DOLE_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11190;old_locus_tag=Dole_2177 NC_009943.1 Protein Homology CDS 2644053 2644820 . - 0 ID=cds-WP_012175593.1;Parent=gene-DOLE_RS11190;Dbxref=Genbank:WP_012175593.1;Name=WP_012175593.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946845.1;locus_tag=DOLE_RS11190;product=enoyl-CoA hydratase-related protein;protein_id=WP_012175593.1;transl_table=11 NC_009943.1 RefSeq gene 2644836 2645360 . - . ID=gene-DOLE_RS11195;Name=DOLE_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11195;old_locus_tag=Dole_2178 NC_009943.1 Protein Homology CDS 2644836 2645360 . - 0 ID=cds-WP_012175594.1;Parent=gene-DOLE_RS11195;Dbxref=Genbank:WP_012175594.1;Name=WP_012175594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012584.2;locus_tag=DOLE_RS11195;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_012175594.1;transl_table=11 NC_009943.1 RefSeq gene 2645555 2647054 . - . ID=gene-DOLE_RS11200;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=DOLE_RS11200;old_locus_tag=Dole_2179 NC_009943.1 Protein Homology CDS 2645555 2647054 . - 0 ID=cds-WP_012175595.1;Parent=gene-DOLE_RS11200;Dbxref=Genbank:WP_012175595.1;Name=WP_012175595.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163184.1;locus_tag=DOLE_RS11200;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_012175595.1;transl_table=11 NC_009943.1 RefSeq gene 2647237 2648853 . - . ID=gene-DOLE_RS11205;Name=DOLE_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11205;old_locus_tag=Dole_2180 NC_009943.1 Protein Homology CDS 2647237 2648853 . - 0 ID=cds-WP_012175596.1;Parent=gene-DOLE_RS11205;Dbxref=Genbank:WP_012175596.1;Name=WP_012175596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013225.2;locus_tag=DOLE_RS11205;product=acetyl-CoA carboxylase subunit beta;protein_id=WP_012175596.1;transl_table=11 NC_009943.1 RefSeq gene 2649066 2650181 . - . ID=gene-DOLE_RS11210;Name=DOLE_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11210;old_locus_tag=Dole_2181 NC_009943.1 Protein Homology CDS 2649066 2650181 . - 0 ID=cds-WP_012175597.1;Parent=gene-DOLE_RS11210;Dbxref=Genbank:WP_012175597.1;Name=WP_012175597.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012656.2;locus_tag=DOLE_RS11210;product=acyl-CoA dehydrogenase;protein_id=WP_012175597.1;transl_table=11 NC_009943.1 RefSeq gene 2650214 2651356 . - . ID=gene-DOLE_RS11215;Name=DOLE_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11215;old_locus_tag=Dole_2182 NC_009943.1 Protein Homology CDS 2650214 2651356 . - 0 ID=cds-WP_012175598.1;Parent=gene-DOLE_RS11215;Dbxref=Genbank:WP_012175598.1;Name=WP_012175598.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948097.1;locus_tag=DOLE_RS11215;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012175598.1;transl_table=11 NC_009943.1 RefSeq gene 2651774 2652277 . - . ID=gene-DOLE_RS11220;Name=DOLE_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11220;old_locus_tag=Dole_2183 NC_009943.1 Protein Homology CDS 2651774 2652277 . - 0 ID=cds-WP_012175599.1;Parent=gene-DOLE_RS11220;Dbxref=Genbank:WP_012175599.1;Name=WP_012175599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949150.1;locus_tag=DOLE_RS11220;product=rubrerythrin family protein;protein_id=WP_012175599.1;transl_table=11 NC_009943.1 RefSeq gene 2652520 2653137 . + . ID=gene-DOLE_RS11225;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=DOLE_RS11225;old_locus_tag=Dole_2184 NC_009943.1 Protein Homology CDS 2652520 2653137 . + 0 ID=cds-WP_012175600.1;Parent=gene-DOLE_RS11225;Dbxref=Genbank:WP_012175600.1;Name=WP_012175600.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877580.1;locus_tag=DOLE_RS11225;product=dephospho-CoA kinase;protein_id=WP_012175600.1;transl_table=11 NC_009943.1 RefSeq gene 2653191 2654474 . + . ID=gene-DOLE_RS11230;Name=DOLE_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11230;old_locus_tag=Dole_2185 NC_009943.1 Protein Homology CDS 2653191 2654474 . + 0 ID=cds-WP_012175601.1;Parent=gene-DOLE_RS11230;Dbxref=Genbank:WP_012175601.1;Name=WP_012175601.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.2;locus_tag=DOLE_RS11230;product=transglycosylase SLT domain-containing protein;protein_id=WP_012175601.1;transl_table=11 NC_009943.1 RefSeq gene 2654753 2655943 . - . ID=gene-DOLE_RS11235;Name=DOLE_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11235;old_locus_tag=Dole_2186 NC_009943.1 Protein Homology CDS 2654753 2655943 . - 0 ID=cds-WP_012175602.1;Parent=gene-DOLE_RS11235;Dbxref=Genbank:WP_012175602.1;Name=WP_012175602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956200.1;locus_tag=DOLE_RS11235;product=Xaa-Pro peptidase family protein;protein_id=WP_012175602.1;transl_table=11 NC_009943.1 RefSeq gene 2656266 2657444 . - . ID=gene-DOLE_RS11240;Name=DOLE_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11240;old_locus_tag=Dole_2187 NC_009943.1 Protein Homology CDS 2656266 2657444 . - 0 ID=cds-WP_012175603.1;Parent=gene-DOLE_RS11240;Dbxref=Genbank:WP_012175603.1;Name=WP_012175603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588337.1;locus_tag=DOLE_RS11240;product=acetyl-CoA C-acetyltransferase;protein_id=WP_012175603.1;transl_table=11 NC_009943.1 RefSeq gene 2657588 2660848 . - . ID=gene-DOLE_RS11245;Name=DOLE_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11245;old_locus_tag=Dole_2188 NC_009943.1 Protein Homology CDS 2657588 2660848 . - 0 ID=cds-WP_012175604.1;Parent=gene-DOLE_RS11245;Dbxref=Genbank:WP_012175604.1;Name=WP_012175604.1;Ontology_term=GO:0016866;gbkey=CDS;go_function=intramolecular transferase activity|0016866||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877082.1;locus_tag=DOLE_RS11245;product=methylmalonyl-CoA mutase family protein;protein_id=WP_012175604.1;transl_table=11 NC_009943.1 RefSeq gene 2660852 2661520 . - . ID=gene-DOLE_RS11250;Name=DOLE_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11250;old_locus_tag=Dole_2189 NC_009943.1 Protein Homology CDS 2660852 2661520 . - 0 ID=cds-WP_012175605.1;Parent=gene-DOLE_RS11250;Dbxref=Genbank:WP_012175605.1;Name=WP_012175605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015902903.1;locus_tag=DOLE_RS11250;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175605.1;transl_table=11 NC_009943.1 RefSeq gene 2661930 2662601 . + . ID=gene-DOLE_RS17495;Name=DOLE_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17495;old_locus_tag=Dole_2190 NC_009943.1 Protein Homology CDS 2661930 2662601 . + 0 ID=cds-WP_012175606.1;Parent=gene-DOLE_RS17495;Dbxref=Genbank:WP_012175606.1;Name=WP_012175606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024701.2;locus_tag=DOLE_RS17495;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175606.1;transl_table=11 NC_009943.1 RefSeq gene 2662702 2665665 . + . ID=gene-DOLE_RS11265;Name=DOLE_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11265;old_locus_tag=Dole_2191 NC_009943.1 Protein Homology CDS 2662702 2665665 . + 0 ID=cds-WP_012175607.1;Parent=gene-DOLE_RS11265;Dbxref=Genbank:WP_012175607.1;Name=WP_012175607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609972.1;locus_tag=DOLE_RS11265;product=pyruvate formate lyase family protein;protein_id=WP_012175607.1;transl_table=11 NC_009943.1 RefSeq gene 2665849 2666772 . + . ID=gene-DOLE_RS11270;Name=DOLE_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11270;old_locus_tag=Dole_2192 NC_009943.1 Protein Homology CDS 2665849 2666772 . + 0 ID=cds-WP_012175608.1;Parent=gene-DOLE_RS11270;Dbxref=Genbank:WP_012175608.1;Name=WP_012175608.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609973.1;locus_tag=DOLE_RS11270;product=glycyl-radical enzyme activating protein;protein_id=WP_012175608.1;transl_table=11 NC_009943.1 RefSeq gene 2666832 2667842 . + . ID=gene-DOLE_RS11275;Name=DOLE_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11275;old_locus_tag=Dole_2193 NC_009943.1 Protein Homology CDS 2666832 2667842 . + 0 ID=cds-WP_012175609.1;Parent=gene-DOLE_RS11275;Dbxref=Genbank:WP_012175609.1;Name=WP_012175609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027681.2;locus_tag=DOLE_RS11275;product=NAD(P)-dependent oxidoreductase;protein_id=WP_012175609.1;transl_table=11 NC_009943.1 RefSeq gene 2668160 2669002 . + . ID=gene-DOLE_RS11280;Name=DOLE_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11280;old_locus_tag=Dole_2194 NC_009943.1 Protein Homology CDS 2668160 2669002 . + 0 ID=cds-WP_012175610.1;Parent=gene-DOLE_RS11280;Dbxref=Genbank:WP_012175610.1;Name=WP_012175610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=DOLE_RS11280;product=SDR family oxidoreductase;protein_id=WP_012175610.1;transl_table=11 NC_009943.1 RefSeq gene 2669013 2670023 . - . ID=gene-DOLE_RS11285;Name=DOLE_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11285;old_locus_tag=Dole_2195 NC_009943.1 Protein Homology CDS 2669013 2670023 . - 0 ID=cds-WP_012175611.1;Parent=gene-DOLE_RS11285;Dbxref=Genbank:WP_012175611.1;Name=WP_012175611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587506.1;locus_tag=DOLE_RS11285;product=aldehyde dehydrogenase;protein_id=WP_012175611.1;transl_table=11 NC_009943.1 RefSeq gene 2670203 2670736 . + . ID=gene-DOLE_RS11290;Name=DOLE_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11290;old_locus_tag=Dole_2196 NC_009943.1 GeneMarkS-2+ CDS 2670203 2670736 . + 0 ID=cds-WP_012175612.1;Parent=gene-DOLE_RS11290;Dbxref=Genbank:WP_012175612.1;Name=WP_012175612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11290;product=hypothetical protein;protein_id=WP_012175612.1;transl_table=11 NC_009943.1 RefSeq gene 2670739 2671632 . - . ID=gene-DOLE_RS11295;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=DOLE_RS11295;old_locus_tag=Dole_2197 NC_009943.1 Protein Homology CDS 2670739 2671632 . - 0 ID=cds-WP_012175613.1;Parent=gene-DOLE_RS11295;Dbxref=Genbank:WP_012175613.1;Name=WP_012175613.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074845.1;locus_tag=DOLE_RS11295;product=type I methionyl aminopeptidase;protein_id=WP_012175613.1;transl_table=11 NC_009943.1 RefSeq gene 2671820 2672224 . + . ID=gene-DOLE_RS11300;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=DOLE_RS11300;old_locus_tag=Dole_2198 NC_009943.1 Protein Homology CDS 2671820 2672224 . + 0 ID=cds-WP_012175614.1;Parent=gene-DOLE_RS11300;Dbxref=Genbank:WP_012175614.1;Name=WP_012175614.1;Ontology_term=GO:0033739;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071384.1;locus_tag=DOLE_RS11300;product=preQ(1) synthase;protein_id=WP_012175614.1;transl_table=11 NC_009943.1 RefSeq gene 2672264 2673337 . + . ID=gene-DOLE_RS11305;Name=DOLE_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11305;old_locus_tag=Dole_2199 NC_009943.1 Protein Homology CDS 2672264 2673337 . + 0 ID=cds-WP_012175615.1;Parent=gene-DOLE_RS11305;Dbxref=Genbank:WP_012175615.1;Name=WP_012175615.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025690.2;locus_tag=DOLE_RS11305;product=DUF4388 domain-containing protein;protein_id=WP_012175615.1;transl_table=11 NC_009943.1 RefSeq gene 2673410 2673730 . - . ID=gene-DOLE_RS11310;Name=DOLE_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11310;old_locus_tag=Dole_2200 NC_009943.1 GeneMarkS-2+ CDS 2673410 2673730 . - 0 ID=cds-WP_012175616.1;Parent=gene-DOLE_RS11310;Dbxref=Genbank:WP_012175616.1;Name=WP_012175616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11310;product=hypothetical protein;protein_id=WP_012175616.1;transl_table=11 NC_009943.1 RefSeq gene 2673793 2674122 . - . ID=gene-DOLE_RS11315;Name=DOLE_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11315;old_locus_tag=Dole_2201 NC_009943.1 Protein Homology CDS 2673793 2674122 . - 0 ID=cds-WP_012175617.1;Parent=gene-DOLE_RS11315;Dbxref=Genbank:WP_012175617.1;Name=WP_012175617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016408.2;locus_tag=DOLE_RS11315;product=polymer-forming cytoskeletal protein;protein_id=WP_012175617.1;transl_table=11 NC_009943.1 RefSeq gene 2674115 2675968 . - . ID=gene-DOLE_RS11320;Name=DOLE_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11320;old_locus_tag=Dole_2202 NC_009943.1 Protein Homology CDS 2674115 2675968 . - 0 ID=cds-WP_012175618.1;Parent=gene-DOLE_RS11320;Dbxref=Genbank:WP_012175618.1;Name=WP_012175618.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028343.2;locus_tag=DOLE_RS11320;product=M14/M99 family metallopeptidase;protein_id=WP_012175618.1;transl_table=11 NC_009943.1 RefSeq gene 2676007 2676909 . - . ID=gene-DOLE_RS11325;Name=DOLE_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11325;old_locus_tag=Dole_2203 NC_009943.1 GeneMarkS-2+ CDS 2676007 2676909 . - 0 ID=cds-WP_153304416.1;Parent=gene-DOLE_RS11325;Dbxref=Genbank:WP_153304416.1;Name=WP_153304416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11325;product=hypothetical protein;protein_id=WP_153304416.1;transl_table=11 NC_009943.1 RefSeq gene 2676843 2678159 . - . ID=gene-DOLE_RS11330;Name=DOLE_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11330;old_locus_tag=Dole_2204 NC_009943.1 Protein Homology CDS 2676843 2678159 . - 0 ID=cds-WP_167320874.1;Parent=gene-DOLE_RS11330;Dbxref=Genbank:WP_167320874.1;Name=WP_167320874.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF015679.2;locus_tag=DOLE_RS11330;product=L%2CD-transpeptidase family protein;protein_id=WP_167320874.1;transl_table=11 NC_009943.1 RefSeq gene 2678231 2679262 . - . ID=gene-DOLE_RS11335;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=DOLE_RS11335;old_locus_tag=Dole_2205 NC_009943.1 Protein Homology CDS 2678231 2679262 . - 0 ID=cds-WP_012175621.1;Parent=gene-DOLE_RS11335;Dbxref=Genbank:WP_012175621.1;Name=WP_012175621.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175621.1;locus_tag=DOLE_RS11335;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_012175621.1;transl_table=11 NC_009943.1 RefSeq gene 2679259 2679876 . - . ID=gene-DOLE_RS11340;Name=DOLE_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11340;old_locus_tag=Dole_2206 NC_009943.1 Protein Homology CDS 2679259 2679876 . - 0 ID=cds-WP_012175622.1;Parent=gene-DOLE_RS11340;Dbxref=Genbank:WP_012175622.1;Name=WP_012175622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175622.1;locus_tag=DOLE_RS11340;product=Holliday junction DNA helicase RuvA;protein_id=WP_012175622.1;transl_table=11 NC_009943.1 RefSeq gene 2679860 2680345 . - . ID=gene-DOLE_RS11345;Name=DOLE_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11345;old_locus_tag=Dole_2207 NC_009943.1 Protein Homology CDS 2679860 2680345 . - 0 ID=cds-WP_012175623.1;Parent=gene-DOLE_RS11345;Dbxref=Genbank:WP_012175623.1;Name=WP_012175623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877189.1;locus_tag=DOLE_RS11345;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_012175623.1;transl_table=11 NC_009943.1 RefSeq gene 2680397 2681224 . - . ID=gene-DOLE_RS17500;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=DOLE_RS17500;old_locus_tag=Dole_2208 NC_009943.1 Protein Homology CDS 2680397 2681224 . - 0 ID=cds-WP_012175624.1;Parent=gene-DOLE_RS17500;Dbxref=Genbank:WP_012175624.1;Name=WP_012175624.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:TIGR02795.1;locus_tag=DOLE_RS17500;product=tol-pal system protein YbgF;protein_id=WP_012175624.1;transl_table=11 NC_009943.1 RefSeq gene 2681374 2681919 . - . ID=gene-DOLE_RS11355;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=DOLE_RS11355;old_locus_tag=Dole_2209 NC_009943.1 Protein Homology CDS 2681374 2681919 . - 0 ID=cds-WP_012175625.1;Parent=gene-DOLE_RS11355;Dbxref=Genbank:WP_012175625.1;Name=WP_012175625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904900.1;locus_tag=DOLE_RS11355;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_012175625.1;transl_table=11 NC_009943.1 RefSeq gene 2681946 2683262 . - . ID=gene-DOLE_RS11360;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=DOLE_RS11360;old_locus_tag=Dole_2210 NC_009943.1 Protein Homology CDS 2681946 2683262 . - 0 ID=cds-WP_012175626.1;Parent=gene-DOLE_RS11360;Dbxref=Genbank:WP_012175626.1;Name=WP_012175626.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175626.1;locus_tag=DOLE_RS11360;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_012175626.1;transl_table=11 NC_009943.1 RefSeq gene 2683291 2684115 . - . ID=gene-DOLE_RS17505;Name=DOLE_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17505;old_locus_tag=Dole_2211 NC_009943.1 Protein Homology CDS 2683291 2684115 . - 0 ID=cds-WP_012175627.1;Parent=gene-DOLE_RS17505;Dbxref=Genbank:WP_012175627.1;Name=WP_012175627.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:NF024503.2;locus_tag=DOLE_RS17505;product=TonB family protein;protein_id=WP_012175627.1;transl_table=11 NC_009943.1 RefSeq gene 2684159 2684581 . - . ID=gene-DOLE_RS11370;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=DOLE_RS11370;old_locus_tag=Dole_2212 NC_009943.1 Protein Homology CDS 2684159 2684581 . - 0 ID=cds-WP_012175628.1;Parent=gene-DOLE_RS11370;Dbxref=Genbank:WP_012175628.1;Name=WP_012175628.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947893.1;locus_tag=DOLE_RS11370;product=protein TolR;protein_id=WP_012175628.1;transl_table=11 NC_009943.1 RefSeq gene 2684578 2685300 . - . ID=gene-DOLE_RS11375;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=DOLE_RS11375;old_locus_tag=Dole_2213 NC_009943.1 Protein Homology CDS 2684578 2685300 . - 0 ID=cds-WP_012175629.1;Parent=gene-DOLE_RS11375;Dbxref=Genbank:WP_012175629.1;Name=WP_012175629.1;Ontology_term=GO:1902600,GO:0015078,GO:0005886;gbkey=CDS;gene=tolQ;go_component=plasma membrane|0005886||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877195.1;locus_tag=DOLE_RS11375;product=protein TolQ;protein_id=WP_012175629.1;transl_table=11 NC_009943.1 RefSeq gene 2685615 2687543 . - . ID=gene-DOLE_RS11380;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=DOLE_RS11380;old_locus_tag=Dole_2214 NC_009943.1 Protein Homology CDS 2685615 2687543 . - 0 ID=cds-WP_012175630.1;Parent=gene-DOLE_RS11380;Dbxref=Genbank:WP_012175630.1;Name=WP_012175630.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071011.1;locus_tag=DOLE_RS11380;product=molecular chaperone HtpG;protein_id=WP_012175630.1;transl_table=11 NC_009943.1 RefSeq gene 2687919 2689103 . - . ID=gene-DOLE_RS11385;Name=larC;gbkey=Gene;gene=larC;gene_biotype=protein_coding;locus_tag=DOLE_RS11385;old_locus_tag=Dole_2215 NC_009943.1 Protein Homology CDS 2687919 2689103 . - 0 ID=cds-WP_012175631.1;Parent=gene-DOLE_RS11385;Dbxref=Genbank:WP_012175631.1;Name=WP_012175631.1;gbkey=CDS;gene=larC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904591.1;locus_tag=DOLE_RS11385;product=nickel pincer cofactor biosynthesis protein LarC;protein_id=WP_012175631.1;transl_table=11 NC_009943.1 RefSeq gene 2689113 2690252 . - . ID=gene-DOLE_RS11390;Name=DOLE_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11390;old_locus_tag=Dole_2216 NC_009943.1 Protein Homology CDS 2689113 2690252 . - 0 ID=cds-WP_012175632.1;Parent=gene-DOLE_RS11390;Dbxref=Genbank:WP_012175632.1;Name=WP_012175632.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904592.1;locus_tag=DOLE_RS11390;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_012175632.1;transl_table=11 NC_009943.1 RefSeq gene 2690342 2690439 . + . ID=gene-DOLE_RS11395;Name=DOLE_RS11395;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS11395;old_locus_tag=Dole_R0035 NC_009943.1 tRNAscan-SE tRNA 2690342 2690439 . + . ID=rna-DOLE_RS11395;Parent=gene-DOLE_RS11395;anticodon=(pos:2690377..2690379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS11395;product=tRNA-Sec NC_009943.1 tRNAscan-SE exon 2690342 2690439 . + . ID=exon-DOLE_RS11395-1;Parent=rna-DOLE_RS11395;anticodon=(pos:2690377..2690379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS11395;product=tRNA-Sec NC_009943.1 RefSeq gene 2690624 2691298 . + . ID=gene-DOLE_RS11400;Name=DOLE_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11400;old_locus_tag=Dole_2217 NC_009943.1 Protein Homology CDS 2690624 2691298 . + 0 ID=cds-WP_012175633.1;Parent=gene-DOLE_RS11400;Dbxref=Genbank:WP_012175633.1;Name=WP_012175633.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876548.1;locus_tag=DOLE_RS11400;product=phosphatidylserine decarboxylase family protein;protein_id=WP_012175633.1;transl_table=11 NC_009943.1 RefSeq gene 2691295 2692134 . + . ID=gene-DOLE_RS11405;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=DOLE_RS11405;old_locus_tag=Dole_2218 NC_009943.1 Protein Homology CDS 2691295 2692134 . + 0 ID=cds-WP_012175634.1;Parent=gene-DOLE_RS11405;Dbxref=Genbank:WP_012175634.1;Name=WP_012175634.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:TIGR00473.1;locus_tag=DOLE_RS11405;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_012175634.1;transl_table=11 NC_009943.1 RefSeq gene 2692232 2693299 . + . ID=gene-DOLE_RS11410;Name=DOLE_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11410;old_locus_tag=Dole_2219 NC_009943.1 Protein Homology CDS 2692232 2693299 . + 0 ID=cds-WP_012175635.1;Parent=gene-DOLE_RS11410;Dbxref=Genbank:WP_012175635.1;Name=WP_012175635.1;Ontology_term=GO:0009098,GO:0000287,GO:0003862,GO:0051287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,3-isopropylmalate dehydrogenase activity|0003862||IEA,NAD binding|0051287||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610379.1;locus_tag=DOLE_RS11410;product=3-isopropylmalate dehydrogenase;protein_id=WP_012175635.1;transl_table=11 NC_009943.1 RefSeq gene 2693320 2694342 . + . ID=gene-DOLE_RS11415;Name=DOLE_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11415;old_locus_tag=Dole_2220 NC_009943.1 Protein Homology CDS 2693320 2694342 . + 0 ID=cds-WP_012175636.1;Parent=gene-DOLE_RS11415;Dbxref=Genbank:WP_012175636.1;Name=WP_012175636.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013162781.1;locus_tag=DOLE_RS11415;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_012175636.1;transl_table=11 NC_009943.1 RefSeq gene 2694402 2694872 . + . ID=gene-DOLE_RS11420;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=DOLE_RS11420;old_locus_tag=Dole_2221 NC_009943.1 Protein Homology CDS 2694402 2694872 . + 0 ID=cds-WP_232362700.1;Parent=gene-DOLE_RS11420;Dbxref=Genbank:WP_232362700.1;Name=WP_232362700.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405215.1;locus_tag=DOLE_RS11420;product=transcription elongation factor GreA;protein_id=WP_232362700.1;transl_table=11 NC_009943.1 RefSeq gene 2694890 2695270 . + . ID=gene-DOLE_RS18610;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=DOLE_RS18610;old_locus_tag=Dole_2222 NC_009943.1 Protein Homology CDS 2694890 2695270 . + 0 ID=cds-WP_232362701.1;Parent=gene-DOLE_RS18610;Dbxref=Genbank:WP_232362701.1;Name=WP_232362701.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:TIGR00690.1;locus_tag=DOLE_RS18610;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_232362701.1;transl_table=11 NC_009943.1 RefSeq gene 2695359 2696021 . + . ID=gene-DOLE_RS11430;Name=DOLE_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11430;old_locus_tag=Dole_2223 NC_009943.1 Protein Homology CDS 2695359 2696021 . + 0 ID=cds-WP_232362745.1;Parent=gene-DOLE_RS11430;Dbxref=Genbank:WP_232362745.1;Name=WP_232362745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074143.1;locus_tag=DOLE_RS11430;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_232362745.1;transl_table=11 NC_009943.1 RefSeq gene 2696128 2696910 . + . ID=gene-DOLE_RS11435;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=DOLE_RS11435;old_locus_tag=Dole_2224 NC_009943.1 Protein Homology CDS 2696128 2696910 . + 0 ID=cds-WP_012175640.1;Parent=gene-DOLE_RS11435;Dbxref=Genbank:WP_012175640.1;Name=WP_012175640.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175640.1;locus_tag=DOLE_RS11435;product=GTP cyclohydrolase FolE2;protein_id=WP_012175640.1;transl_table=11 NC_009943.1 RefSeq gene 2696900 2698168 . - . ID=gene-DOLE_RS11440;Name=DOLE_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11440;old_locus_tag=Dole_2225 NC_009943.1 Protein Homology CDS 2696900 2698168 . - 0 ID=cds-WP_167320875.1;Parent=gene-DOLE_RS11440;Dbxref=Genbank:WP_167320875.1;Name=WP_167320875.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF014200.2;locus_tag=DOLE_RS11440;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_167320875.1;transl_table=11 NC_009943.1 RefSeq gene 2698194 2699621 . - . ID=gene-DOLE_RS11445;Name=DOLE_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11445;old_locus_tag=Dole_2226 NC_009943.1 Protein Homology CDS 2698194 2699621 . - 0 ID=cds-WP_012175642.1;Parent=gene-DOLE_RS11445;Dbxref=Genbank:WP_012175642.1;Name=WP_012175642.1;Ontology_term=GO:0006508,GO:0004177,GO:0008270;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609952.1;locus_tag=DOLE_RS11445;product=aminopeptidase;protein_id=WP_012175642.1;transl_table=11 NC_009943.1 RefSeq gene 2699805 2700245 . - . ID=gene-DOLE_RS11450;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=DOLE_RS11450;old_locus_tag=Dole_2227 NC_009943.1 Protein Homology CDS 2699805 2700245 . - 0 ID=cds-WP_012175643.1;Parent=gene-DOLE_RS11450;Dbxref=Genbank:WP_012175643.1;Name=WP_012175643.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175643.1;locus_tag=DOLE_RS11450;product=D-aminoacyl-tRNA deacylase;protein_id=WP_012175643.1;transl_table=11 NC_009943.1 RefSeq gene 2700331 2700780 . - . ID=gene-DOLE_RS11455;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=DOLE_RS11455;old_locus_tag=Dole_2228 NC_009943.1 Protein Homology CDS 2700331 2700780 . - 0 ID=cds-WP_012175644.1;Parent=gene-DOLE_RS11455;Dbxref=Genbank:WP_012175644.1;Name=WP_012175644.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609703.1;locus_tag=DOLE_RS11455;product=type II 3-dehydroquinate dehydratase;protein_id=WP_012175644.1;transl_table=11 NC_009943.1 RefSeq gene 2700789 2701448 . - . ID=gene-DOLE_RS11460;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=DOLE_RS11460;old_locus_tag=Dole_2229 NC_009943.1 Protein Homology CDS 2700789 2701448 . - 0 ID=cds-WP_012175645.1;Parent=gene-DOLE_RS11460;Dbxref=Genbank:WP_012175645.1;Name=WP_012175645.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904557.1;locus_tag=DOLE_RS11460;product=ribulose-phosphate 3-epimerase;protein_id=WP_012175645.1;transl_table=11 NC_009943.1 RefSeq gene 2701491 2702462 . - . ID=gene-DOLE_RS11465;Name=DOLE_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11465;old_locus_tag=Dole_2230 NC_009943.1 Protein Homology CDS 2701491 2702462 . - 0 ID=cds-WP_012175646.1;Parent=gene-DOLE_RS11465;Dbxref=Genbank:WP_012175646.1;Name=WP_012175646.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015734.2;locus_tag=DOLE_RS11465;product=PASTA domain-containing protein;protein_id=WP_012175646.1;transl_table=11 NC_009943.1 RefSeq gene 2702455 2703861 . - . ID=gene-DOLE_RS11470;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=DOLE_RS11470;old_locus_tag=Dole_2231 NC_009943.1 Protein Homology CDS 2702455 2703861 . - 0 ID=cds-WP_012175647.1;Parent=gene-DOLE_RS11470;Dbxref=Genbank:WP_012175647.1;Name=WP_012175647.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF011494.0;locus_tag=DOLE_RS11470;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_012175647.1;transl_table=11 NC_009943.1 RefSeq gene 2703854 2704795 . - . ID=gene-DOLE_RS11475;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=DOLE_RS11475;old_locus_tag=Dole_2232 NC_009943.1 Protein Homology CDS 2703854 2704795 . - 0 ID=cds-WP_012175648.1;Parent=gene-DOLE_RS11475;Dbxref=Genbank:WP_012175648.1;Name=WP_012175648.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877528.1;locus_tag=DOLE_RS11475;product=methionyl-tRNA formyltransferase;protein_id=WP_012175648.1;transl_table=11 NC_009943.1 RefSeq gene 2704780 2705301 . - . ID=gene-DOLE_RS11480;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=DOLE_RS11480;old_locus_tag=Dole_2233 NC_009943.1 Protein Homology CDS 2704780 2705301 . - 0 ID=cds-WP_012175649.1;Parent=gene-DOLE_RS11480;Dbxref=Genbank:WP_012175649.1;Name=WP_012175649.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175649.1;locus_tag=DOLE_RS11480;product=peptide deformylase;protein_id=WP_012175649.1;transl_table=11 NC_009943.1 RefSeq gene 2705345 2706277 . - . ID=gene-DOLE_RS11485;Name=DOLE_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11485;old_locus_tag=Dole_2234 NC_009943.1 Protein Homology CDS 2705345 2706277 . - 0 ID=cds-WP_041280529.1;Parent=gene-DOLE_RS11485;Dbxref=Genbank:WP_041280529.1;Name=WP_041280529.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904553.1;locus_tag=DOLE_RS11485;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_041280529.1;transl_table=11 NC_009943.1 RefSeq gene 2706413 2706499 . + . ID=gene-DOLE_RS11490;Name=DOLE_RS11490;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS11490;old_locus_tag=Dole_R0036 NC_009943.1 tRNAscan-SE tRNA 2706413 2706499 . + . ID=rna-DOLE_RS11490;Parent=gene-DOLE_RS11490;anticodon=(pos:2706447..2706449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS11490;product=tRNA-Leu NC_009943.1 tRNAscan-SE exon 2706413 2706499 . + . ID=exon-DOLE_RS11490-1;Parent=rna-DOLE_RS11490;anticodon=(pos:2706447..2706449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS11490;product=tRNA-Leu NC_009943.1 RefSeq gene 2706627 2706983 . - . ID=gene-DOLE_RS11495;Name=DOLE_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11495;old_locus_tag=Dole_2235 NC_009943.1 Protein Homology CDS 2706627 2706983 . - 0 ID=cds-WP_012175651.1;Parent=gene-DOLE_RS11495;Dbxref=Genbank:WP_012175651.1;Name=WP_012175651.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS11495;product=response regulator;protein_id=WP_012175651.1;transl_table=11 NC_009943.1 RefSeq gene 2707311 2708897 . + . ID=gene-DOLE_RS11500;Name=DOLE_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11500;old_locus_tag=Dole_2236 NC_009943.1 Protein Homology CDS 2707311 2708897 . + 0 ID=cds-WP_012175652.1;Parent=gene-DOLE_RS11500;Dbxref=Genbank:WP_012175652.1;Name=WP_012175652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=DOLE_RS11500;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_012175652.1;transl_table=11 NC_009943.1 RefSeq gene 2708897 2710135 . + . ID=gene-DOLE_RS11505;Name=DOLE_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11505;old_locus_tag=Dole_2237 NC_009943.1 Protein Homology CDS 2708897 2710135 . + 0 ID=cds-WP_012175653.1;Parent=gene-DOLE_RS11505;Dbxref=Genbank:WP_012175653.1;Name=WP_012175653.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=DOLE_RS11505;product=restriction endonuclease subunit S;protein_id=WP_012175653.1;transl_table=11 NC_009943.1 RefSeq gene 2710132 2712246 . + . ID=gene-DOLE_RS11510;Name=DOLE_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11510;old_locus_tag=Dole_2238 NC_009943.1 Protein Homology CDS 2710132 2712246 . + 0 ID=cds-WP_012175654.1;Parent=gene-DOLE_RS11510;Dbxref=Genbank:WP_012175654.1;Name=WP_012175654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003160811.1;locus_tag=DOLE_RS11510;product=DUF262 domain-containing protein;protein_id=WP_012175654.1;transl_table=11 NC_009943.1 RefSeq gene 2712243 2715383 . + . ID=gene-DOLE_RS11515;Name=DOLE_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11515;old_locus_tag=Dole_2239 NC_009943.1 Protein Homology CDS 2712243 2715383 . + 0 ID=cds-WP_012175655.1;Parent=gene-DOLE_RS11515;Dbxref=Genbank:WP_012175655.1;Name=WP_012175655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00348.1;locus_tag=DOLE_RS11515;product=type I restriction endonuclease subunit R;protein_id=WP_012175655.1;transl_table=11 NC_009943.1 RefSeq gene 2715473 2715997 . + . ID=gene-DOLE_RS11520;Name=DOLE_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11520;old_locus_tag=Dole_2240 NC_009943.1 GeneMarkS-2+ CDS 2715473 2715997 . + 0 ID=cds-WP_012175656.1;Parent=gene-DOLE_RS11520;Dbxref=Genbank:WP_012175656.1;Name=WP_012175656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11520;product=hypothetical protein;protein_id=WP_012175656.1;transl_table=11 NC_009943.1 RefSeq gene 2716097 2716432 . + . ID=gene-DOLE_RS17980;Name=DOLE_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17980;old_locus_tag=Dole_2241 NC_009943.1 Protein Homology CDS 2716097 2716432 . + 0 ID=cds-WP_012175657.1;Parent=gene-DOLE_RS17980;Dbxref=Genbank:WP_012175657.1;Name=WP_012175657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956779.1;locus_tag=DOLE_RS17980;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012175657.1;transl_table=11 NC_009943.1 RefSeq gene 2716429 2716728 . + . ID=gene-DOLE_RS11530;Name=DOLE_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11530;old_locus_tag=Dole_2242 NC_009943.1 Protein Homology CDS 2716429 2716728 . + 0 ID=cds-WP_012175658.1;Parent=gene-DOLE_RS11530;Dbxref=Genbank:WP_012175658.1;Name=WP_012175658.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011798662.1;locus_tag=DOLE_RS11530;product=putative addiction module antidote protein;protein_id=WP_012175658.1;transl_table=11 NC_009943.1 RefSeq gene 2716853 2717995 . + . ID=gene-DOLE_RS11535;Name=DOLE_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11535;old_locus_tag=Dole_2243 NC_009943.1 Protein Homology CDS 2716853 2717995 . + 0 ID=cds-WP_012175659.1;Parent=gene-DOLE_RS11535;Dbxref=Genbank:WP_012175659.1;Name=WP_012175659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905310.1;locus_tag=DOLE_RS11535;product=cysteine desulfurase family protein;protein_id=WP_012175659.1;transl_table=11 NC_009943.1 RefSeq gene 2718022 2718468 . + . ID=gene-DOLE_RS11540;Name=DOLE_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11540;old_locus_tag=Dole_2244 NC_009943.1 Protein Homology CDS 2718022 2718468 . + 0 ID=cds-WP_012175660.1;Parent=gene-DOLE_RS11540;Dbxref=Genbank:WP_012175660.1;Name=WP_012175660.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039818.1;locus_tag=DOLE_RS11540;product=hypothetical protein;protein_id=WP_012175660.1;transl_table=11 NC_009943.1 RefSeq gene 2718534 2719799 . + . ID=gene-DOLE_RS11545;Name=DOLE_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11545;old_locus_tag=Dole_2245 NC_009943.1 Protein Homology CDS 2718534 2719799 . + 0 ID=cds-WP_012175661.1;Parent=gene-DOLE_RS11545;Dbxref=Genbank:WP_012175661.1;Name=WP_012175661.1;Ontology_term=GO:0008654,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:NF013250.2;locus_tag=DOLE_RS11545;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_012175661.1;transl_table=11 NC_009943.1 RefSeq gene 2719814 2720041 . + . ID=gene-DOLE_RS11550;Name=DOLE_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11550 NC_009943.1 GeneMarkS-2+ CDS 2719814 2720041 . + 0 ID=cds-WP_041280530.1;Parent=gene-DOLE_RS11550;Dbxref=Genbank:WP_041280530.1;Name=WP_041280530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11550;product=hypothetical protein;protein_id=WP_041280530.1;transl_table=11 NC_009943.1 RefSeq gene 2720233 2722527 . + . ID=gene-DOLE_RS17510;Name=DOLE_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17510;old_locus_tag=Dole_2246 NC_009943.1 Protein Homology CDS 2720233 2722527 . + 0 ID=cds-WP_012175662.1;Parent=gene-DOLE_RS17510;Dbxref=Genbank:WP_012175662.1;Name=WP_012175662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=DOLE_RS17510;product=EAL domain-containing protein;protein_id=WP_012175662.1;transl_table=11 NC_009943.1 RefSeq gene 2722631 2723914 . - . ID=gene-DOLE_RS11560;Name=DOLE_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11560;old_locus_tag=Dole_2247 NC_009943.1 Protein Homology CDS 2722631 2723914 . - 0 ID=cds-WP_012175663.1;Parent=gene-DOLE_RS11560;Dbxref=Genbank:WP_012175663.1;Name=WP_012175663.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024634.2;locus_tag=DOLE_RS11560;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012175663.1;transl_table=11 NC_009943.1 RefSeq gene 2724195 2725019 . + . ID=gene-DOLE_RS11565;Name=DOLE_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11565;old_locus_tag=Dole_2248 NC_009943.1 Protein Homology CDS 2724195 2725019 . + 0 ID=cds-WP_012175664.1;Parent=gene-DOLE_RS11565;Dbxref=Genbank:WP_012175664.1;Name=WP_012175664.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF012596.2;locus_tag=DOLE_RS11565;product=enoyl-CoA hydratase-related protein;protein_id=WP_012175664.1;transl_table=11 NC_009943.1 RefSeq gene 2725054 2726142 . + . ID=gene-DOLE_RS11570;Name=DOLE_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11570;old_locus_tag=Dole_2249 NC_009943.1 GeneMarkS-2+ CDS 2725054 2726142 . + 0 ID=cds-WP_012175665.1;Parent=gene-DOLE_RS11570;Dbxref=Genbank:WP_012175665.1;Name=WP_012175665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11570;product=hypothetical protein;protein_id=WP_012175665.1;transl_table=11 NC_009943.1 RefSeq gene 2726733 2728349 . + . ID=gene-DOLE_RS11575;Name=DOLE_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11575;old_locus_tag=Dole_2250 NC_009943.1 Protein Homology CDS 2726733 2728349 . + 0 ID=cds-WP_012175666.1;Parent=gene-DOLE_RS11575;Dbxref=Genbank:WP_012175666.1;Name=WP_012175666.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014176.2;locus_tag=DOLE_RS11575;product=cytochrome c class III;protein_id=WP_012175666.1;transl_table=11 NC_009943.1 RefSeq gene 2728370 2729431 . + . ID=gene-DOLE_RS11580;Name=DOLE_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11580;old_locus_tag=Dole_2251 NC_009943.1 Protein Homology CDS 2728370 2729431 . + 0 ID=cds-WP_012175667.1;Parent=gene-DOLE_RS11580;Dbxref=Genbank:WP_012175667.1;Name=WP_012175667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964477.1;locus_tag=DOLE_RS11580;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012175667.1;transl_table=11 NC_009943.1 RefSeq gene 2729431 2730639 . + . ID=gene-DOLE_RS11585;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=DOLE_RS11585;old_locus_tag=Dole_2252 NC_009943.1 Protein Homology CDS 2729431 2730639 . + 0 ID=cds-WP_012175668.1;Parent=gene-DOLE_RS11585;Dbxref=Genbank:WP_012175668.1;Name=WP_012175668.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964476.1;locus_tag=DOLE_RS11585;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_012175668.1;transl_table=11 NC_009943.1 RefSeq gene 2730684 2730818 . + . ID=gene-DOLE_RS18685;Name=DOLE_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18685;old_locus_tag=Dole_2253 NC_009943.1 GeneMarkS-2+ CDS 2730684 2730818 . + 0 ID=cds-WP_012175669.1;Parent=gene-DOLE_RS18685;Dbxref=Genbank:WP_012175669.1;Name=WP_012175669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18685;product=hypothetical protein;protein_id=WP_012175669.1;transl_table=11 NC_009943.1 RefSeq gene 2730882 2731559 . + . ID=gene-DOLE_RS11590;Name=DOLE_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11590;old_locus_tag=Dole_2254 NC_009943.1 Protein Homology CDS 2730882 2731559 . + 0 ID=cds-WP_012175670.1;Parent=gene-DOLE_RS11590;Dbxref=Genbank:WP_012175670.1;Name=WP_012175670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964474.1;locus_tag=DOLE_RS11590;product=hypothetical protein;protein_id=WP_012175670.1;transl_table=11 NC_009943.1 RefSeq gene 2731615 2732997 . + . ID=gene-DOLE_RS11595;Name=DOLE_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11595;old_locus_tag=Dole_2255 NC_009943.1 Protein Homology CDS 2731615 2732997 . + 0 ID=cds-WP_012175671.1;Parent=gene-DOLE_RS11595;Dbxref=Genbank:WP_012175671.1;Name=WP_012175671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959021.1;locus_tag=DOLE_RS11595;product=(Fe-S)-binding protein;protein_id=WP_012175671.1;transl_table=11 NC_009943.1 RefSeq gene 2733076 2734002 . + . ID=gene-DOLE_RS11600;Name=DOLE_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11600;old_locus_tag=Dole_2256 NC_009943.1 Protein Homology CDS 2733076 2734002 . + 0 ID=cds-WP_012175672.1;Parent=gene-DOLE_RS11600;Dbxref=Genbank:WP_012175672.1;Name=WP_012175672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876328.1;locus_tag=DOLE_RS11600;product=universal stress protein;protein_id=WP_012175672.1;transl_table=11 NC_009943.1 RefSeq gene 2734034 2734396 . + . ID=gene-DOLE_RS11605;Name=DOLE_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11605;old_locus_tag=Dole_2257 NC_009943.1 Protein Homology CDS 2734034 2734396 . + 0 ID=cds-WP_012175673.1;Parent=gene-DOLE_RS11605;Dbxref=Genbank:WP_012175673.1;Name=WP_012175673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964468.1;locus_tag=DOLE_RS11605;product=response regulator;protein_id=WP_012175673.1;transl_table=11 NC_009943.1 RefSeq gene 2734386 2735972 . + . ID=gene-DOLE_RS11610;Name=DOLE_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11610;old_locus_tag=Dole_2258 NC_009943.1 Protein Homology CDS 2734386 2735972 . + 0 ID=cds-WP_012175674.1;Parent=gene-DOLE_RS11610;Dbxref=Genbank:WP_012175674.1;Name=WP_012175674.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS11610;product=ATP-binding protein;protein_id=WP_012175674.1;transl_table=11 NC_009943.1 RefSeq gene 2736331 2736795 . + . ID=gene-DOLE_RS11615;Name=DOLE_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11615;old_locus_tag=Dole_2259 NC_009943.1 Protein Homology CDS 2736331 2736795 . + 0 ID=cds-WP_012175675.1;Parent=gene-DOLE_RS11615;Dbxref=Genbank:WP_012175675.1;Name=WP_012175675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964463.1;locus_tag=DOLE_RS11615;product=Rrf2 family transcriptional regulator;protein_id=WP_012175675.1;transl_table=11 NC_009943.1 RefSeq gene 2736850 2737554 . + . ID=gene-DOLE_RS11620;Name=DOLE_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11620;old_locus_tag=Dole_2260 NC_009943.1 Protein Homology CDS 2736850 2737554 . + 0 ID=cds-WP_012175676.1;Parent=gene-DOLE_RS11620;Dbxref=Genbank:WP_012175676.1;Name=WP_012175676.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS11620;product=hydroxyacylglutathione hydrolase family protein;protein_id=WP_012175676.1;transl_table=11 NC_009943.1 RefSeq gene 2737665 2738504 . + . ID=gene-DOLE_RS11625;Name=DOLE_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11625;old_locus_tag=Dole_2261 NC_009943.1 Protein Homology CDS 2737665 2738504 . + 0 ID=cds-WP_012175677.1;Parent=gene-DOLE_RS11625;Dbxref=Genbank:WP_012175677.1;Name=WP_012175677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588541.1;locus_tag=DOLE_RS11625;product=rhodanese-like domain-containing protein;protein_id=WP_012175677.1;transl_table=11 NC_009943.1 RefSeq gene 2738505 2739617 . + . ID=gene-DOLE_RS11630;Name=DOLE_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11630;old_locus_tag=Dole_2262 NC_009943.1 Protein Homology CDS 2738505 2739617 . + 0 ID=cds-WP_012175678.1;Parent=gene-DOLE_RS11630;Dbxref=Genbank:WP_012175678.1;Name=WP_012175678.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906447.1;locus_tag=DOLE_RS11630;product=FAD-dependent oxidoreductase;protein_id=WP_012175678.1;transl_table=11 NC_009943.1 RefSeq gene 2739619 2739981 . + . ID=gene-DOLE_RS11635;Name=DOLE_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11635;old_locus_tag=Dole_2263 NC_009943.1 GeneMarkS-2+ CDS 2739619 2739981 . + 0 ID=cds-WP_012175679.1;Parent=gene-DOLE_RS11635;Dbxref=Genbank:WP_012175679.1;Name=WP_012175679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11635;product=hypothetical protein;protein_id=WP_012175679.1;transl_table=11 NC_009943.1 RefSeq gene 2740103 2740813 . + . ID=gene-DOLE_RS11640;Name=DOLE_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11640;old_locus_tag=Dole_2264 NC_009943.1 Protein Homology CDS 2740103 2740813 . + 0 ID=cds-WP_012175680.1;Parent=gene-DOLE_RS11640;Dbxref=Genbank:WP_012175680.1;Name=WP_012175680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609669.1;locus_tag=DOLE_RS11640;product=GAF and ANTAR domain-containing protein;protein_id=WP_012175680.1;transl_table=11 NC_009943.1 RefSeq gene 2740978 2742279 . - . ID=gene-DOLE_RS11645;Name=DOLE_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11645;old_locus_tag=Dole_2265 NC_009943.1 Protein Homology CDS 2740978 2742279 . - 0 ID=cds-WP_012175681.1;Parent=gene-DOLE_RS11645;Dbxref=Genbank:WP_012175681.1;Name=WP_012175681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875085.1;locus_tag=DOLE_RS11645;product=helix-turn-helix domain-containing protein;protein_id=WP_012175681.1;transl_table=11 NC_009943.1 RefSeq gene 2742607 2744262 . + . ID=gene-DOLE_RS11650;Name=DOLE_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11650;old_locus_tag=Dole_2266 NC_009943.1 Protein Homology CDS 2742607 2744262 . + 0 ID=cds-WP_012175682.1;Parent=gene-DOLE_RS11650;Dbxref=Genbank:WP_012175682.1;Name=WP_012175682.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609668.1;locus_tag=DOLE_RS11650;product=glutamate synthase-related protein;protein_id=WP_012175682.1;transl_table=11 NC_009943.1 RefSeq gene 2744505 2745095 . + . ID=gene-DOLE_RS11655;Name=DOLE_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11655;old_locus_tag=Dole_2267 NC_009943.1 GeneMarkS-2+ CDS 2744505 2745095 . + 0 ID=cds-WP_041280531.1;Parent=gene-DOLE_RS11655;Dbxref=Genbank:WP_041280531.1;Name=WP_041280531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11655;product=hypothetical protein;protein_id=WP_041280531.1;transl_table=11 NC_009943.1 RefSeq gene 2745129 2745722 . + . ID=gene-DOLE_RS11660;Name=DOLE_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11660;old_locus_tag=Dole_2268 NC_009943.1 GeneMarkS-2+ CDS 2745129 2745722 . + 0 ID=cds-WP_012175684.1;Parent=gene-DOLE_RS11660;Dbxref=Genbank:WP_012175684.1;Name=WP_012175684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11660;product=hypothetical protein;protein_id=WP_012175684.1;transl_table=11 NC_009943.1 RefSeq gene 2746162 2747499 . + . ID=gene-DOLE_RS11665;Name=DOLE_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11665;old_locus_tag=Dole_2269 NC_009943.1 Protein Homology CDS 2746162 2747499 . + 0 ID=cds-WP_012175685.1;Parent=gene-DOLE_RS11665;Dbxref=Genbank:WP_012175685.1;Name=WP_012175685.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF037979.1;locus_tag=DOLE_RS11665;product=sodium-dependent transporter;protein_id=WP_012175685.1;transl_table=11 NC_009943.1 RefSeq gene 2747769 2747987 . + . ID=gene-DOLE_RS11670;Name=DOLE_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11670;old_locus_tag=Dole_2270 NC_009943.1 Protein Homology CDS 2747769 2747987 . + 0 ID=cds-WP_041281118.1;Parent=gene-DOLE_RS11670;Dbxref=Genbank:WP_041281118.1;Name=WP_041281118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968438.1;locus_tag=DOLE_RS11670;product=addiction module protein;protein_id=WP_041281118.1;transl_table=11 NC_009943.1 RefSeq gene 2748401 2750572 . - . ID=gene-DOLE_RS11680;Name=DOLE_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11680;old_locus_tag=Dole_2272 NC_009943.1 Protein Homology CDS 2748401 2750572 . - 0 ID=cds-WP_012175688.1;Parent=gene-DOLE_RS11680;Dbxref=Genbank:WP_012175688.1;Name=WP_012175688.1;Ontology_term=GO:0004356;gbkey=CDS;go_function=glutamate-ammonia ligase activity|0004356||IEA;inference=COORDINATES: protein motif:HMM:NF012348.2;locus_tag=DOLE_RS11680;product=glutamine synthetase III;protein_id=WP_012175688.1;transl_table=11 NC_009943.1 RefSeq gene 2751034 2752365 . + . ID=gene-DOLE_RS11685;Name=DOLE_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11685;old_locus_tag=Dole_2273 NC_009943.1 Protein Homology CDS 2751034 2752365 . + 0 ID=cds-WP_012175689.1;Parent=gene-DOLE_RS11685;Dbxref=Genbank:WP_012175689.1;Name=WP_012175689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723102.1;locus_tag=DOLE_RS11685;product=glutamine synthetase family protein;protein_id=WP_012175689.1;transl_table=11 NC_009943.1 RefSeq gene 2752960 2754090 . + . ID=gene-DOLE_RS11690;Name=DOLE_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11690;old_locus_tag=Dole_2274 NC_009943.1 Protein Homology CDS 2752960 2754090 . + 0 ID=cds-WP_012175690.1;Parent=gene-DOLE_RS11690;Dbxref=Genbank:WP_012175690.1;Name=WP_012175690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071655.1;locus_tag=DOLE_RS11690;product=glutamate synthase;protein_id=WP_012175690.1;transl_table=11 NC_009943.1 RefSeq gene 2754054 2755688 . + . ID=gene-DOLE_RS11695;Name=DOLE_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11695;old_locus_tag=Dole_2275 NC_009943.1 Protein Homology CDS 2754054 2755688 . + 0 ID=cds-WP_012175691.1;Parent=gene-DOLE_RS11695;Dbxref=Genbank:WP_012175691.1;Name=WP_012175691.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958577.1;locus_tag=DOLE_RS11695;product=glutamate synthase-related protein;protein_id=WP_012175691.1;transl_table=11 NC_009943.1 RefSeq gene 2755763 2758093 . + . ID=gene-DOLE_RS11700;Name=DOLE_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11700;old_locus_tag=Dole_2276 NC_009943.1 Protein Homology CDS 2755763 2758093 . + 0 ID=cds-WP_012175692.1;Parent=gene-DOLE_RS11700;Dbxref=Genbank:WP_012175692.1;Name=WP_012175692.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877480.1;locus_tag=DOLE_RS11700;product=FAD-dependent oxidoreductase;protein_id=WP_012175692.1;transl_table=11 NC_009943.1 RefSeq gene 2758339 2758896 . + . ID=gene-DOLE_RS11705;Name=DOLE_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11705;old_locus_tag=Dole_2277 NC_009943.1 GeneMarkS-2+ CDS 2758339 2758896 . + 0 ID=cds-WP_012175693.1;Parent=gene-DOLE_RS11705;Dbxref=Genbank:WP_012175693.1;Name=WP_012175693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11705;product=hypothetical protein;protein_id=WP_012175693.1;transl_table=11 NC_009943.1 RefSeq gene 2759173 2761680 . - . ID=gene-DOLE_RS11710;Name=DOLE_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11710;old_locus_tag=Dole_2278 NC_009943.1 Protein Homology CDS 2759173 2761680 . - 0 ID=cds-WP_012175694.1;Parent=gene-DOLE_RS11710;Dbxref=Genbank:WP_012175694.1;Name=WP_012175694.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957933.1;locus_tag=DOLE_RS11710;product=MMPL family transporter;protein_id=WP_012175694.1;transl_table=11 NC_009943.1 RefSeq gene 2761680 2762291 . - . ID=gene-DOLE_RS11715;Name=DOLE_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11715;old_locus_tag=Dole_2279 NC_009943.1 Protein Homology CDS 2761680 2762291 . - 0 ID=cds-WP_012175695.1;Parent=gene-DOLE_RS11715;Dbxref=Genbank:WP_012175695.1;Name=WP_012175695.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017319.2;locus_tag=DOLE_RS11715;product=ABC transporter substrate-binding protein;protein_id=WP_012175695.1;transl_table=11 NC_009943.1 RefSeq gene 2762295 2763242 . - . ID=gene-DOLE_RS11720;Name=DOLE_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11720;old_locus_tag=Dole_2280 NC_009943.1 Protein Homology CDS 2762295 2763242 . - 0 ID=cds-WP_012175696.1;Parent=gene-DOLE_RS11720;Dbxref=Genbank:WP_012175696.1;Name=WP_012175696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016236.2;locus_tag=DOLE_RS11720;product=VacJ family lipoprotein;protein_id=WP_012175696.1;transl_table=11 NC_009943.1 RefSeq gene 2763515 2763958 . + . ID=gene-DOLE_RS11725;Name=DOLE_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11725;old_locus_tag=Dole_2281 NC_009943.1 GeneMarkS-2+ CDS 2763515 2763958 . + 0 ID=cds-WP_012175697.1;Parent=gene-DOLE_RS11725;Dbxref=Genbank:WP_012175697.1;Name=WP_012175697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11725;product=hypothetical protein;protein_id=WP_012175697.1;transl_table=11 NC_009943.1 RefSeq gene 2763985 2765115 . + . ID=gene-DOLE_RS11730;Name=DOLE_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11730;old_locus_tag=Dole_2282 NC_009943.1 Protein Homology CDS 2763985 2765115 . + 0 ID=cds-WP_012175698.1;Parent=gene-DOLE_RS11730;Dbxref=Genbank:WP_012175698.1;Name=WP_012175698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585518.1;locus_tag=DOLE_RS11730;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_012175698.1;transl_table=11 NC_009943.1 RefSeq gene 2765269 2765826 . + . ID=gene-DOLE_RS11735;Name=DOLE_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11735;old_locus_tag=Dole_2283 NC_009943.1 Protein Homology CDS 2765269 2765826 . + 0 ID=cds-WP_012175699.1;Parent=gene-DOLE_RS11735;Dbxref=Genbank:WP_012175699.1;Name=WP_012175699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024901.2;locus_tag=DOLE_RS11735;product=DUF4124 domain-containing protein;protein_id=WP_012175699.1;transl_table=11 NC_009943.1 RefSeq gene 2765871 2767160 . + . ID=gene-DOLE_RS11740;Name=DOLE_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11740;old_locus_tag=Dole_2284 NC_009943.1 Protein Homology CDS 2765871 2767160 . + 0 ID=cds-WP_012175700.1;Parent=gene-DOLE_RS11740;Dbxref=Genbank:WP_012175700.1;Name=WP_012175700.1;Ontology_term=GO:0005975,GO:0008270,GO:0016832;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404734.1;locus_tag=DOLE_RS11740;product=class II fructose-bisphosphate aldolase;protein_id=WP_012175700.1;transl_table=11 NC_009943.1 RefSeq gene 2767434 2767856 . + . ID=gene-DOLE_RS11745;Name=DOLE_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11745;old_locus_tag=Dole_2285 NC_009943.1 Protein Homology CDS 2767434 2767856 . + 0 ID=cds-WP_232362702.1;Parent=gene-DOLE_RS11745;Dbxref=Genbank:WP_232362702.1;Name=WP_232362702.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012514.2;locus_tag=DOLE_RS11745;product=NUDIX domain-containing protein;protein_id=WP_232362702.1;transl_table=11 NC_009943.1 RefSeq gene 2768045 2772799 . - . ID=gene-DOLE_RS11750;Name=DOLE_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11750;old_locus_tag=Dole_2286 NC_009943.1 Protein Homology CDS 2768045 2772799 . - 0 ID=cds-WP_012175702.1;Parent=gene-DOLE_RS11750;Dbxref=Genbank:WP_012175702.1;Name=WP_012175702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.2;locus_tag=DOLE_RS11750;product=YadA-like family protein;protein_id=WP_012175702.1;transl_table=11 NC_009943.1 RefSeq gene 2772844 2773437 . - . ID=gene-DOLE_RS11755;Name=DOLE_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11755;old_locus_tag=Dole_2287 NC_009943.1 GeneMarkS-2+ CDS 2772844 2773437 . - 0 ID=cds-WP_153304420.1;Parent=gene-DOLE_RS11755;Dbxref=Genbank:WP_153304420.1;Name=WP_153304420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11755;product=hypothetical protein;protein_id=WP_153304420.1;transl_table=11 NC_009943.1 RefSeq gene 2773717 2774871 . - . ID=gene-DOLE_RS11760;Name=DOLE_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11760;old_locus_tag=Dole_2288 NC_009943.1 Protein Homology CDS 2773717 2774871 . - 0 ID=cds-WP_012175704.1;Parent=gene-DOLE_RS11760;Dbxref=Genbank:WP_012175704.1;Name=WP_012175704.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012678.2;locus_tag=DOLE_RS11760;product=iron-containing alcohol dehydrogenase;protein_id=WP_012175704.1;transl_table=11 NC_009943.1 RefSeq gene 2774901 2776760 . - . ID=gene-DOLE_RS11765;Name=DOLE_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11765;old_locus_tag=Dole_2289 NC_009943.1 Protein Homology CDS 2774901 2776760 . - 0 ID=cds-WP_012175705.1;Parent=gene-DOLE_RS11765;Dbxref=Genbank:WP_012175705.1;Name=WP_012175705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175191.1;locus_tag=DOLE_RS11765;product=aldehyde ferredoxin oxidoreductase family protein;protein_id=WP_012175705.1;transl_table=11 NC_009943.1 RefSeq gene 2776794 2777978 . - . ID=gene-DOLE_RS11770;Name=DOLE_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11770;old_locus_tag=Dole_2290 NC_009943.1 Protein Homology CDS 2776794 2777978 . - 0 ID=cds-WP_012175706.1;Parent=gene-DOLE_RS11770;Dbxref=Genbank:WP_012175706.1;Name=WP_012175706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949203.1;locus_tag=DOLE_RS11770;product=iron-containing alcohol dehydrogenase;protein_id=WP_012175706.1;transl_table=11 NC_009943.1 RefSeq gene 2778002 2778535 . - . ID=gene-DOLE_RS11775;Name=DOLE_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11775;old_locus_tag=Dole_2291 NC_009943.1 GeneMarkS-2+ CDS 2778002 2778535 . - 0 ID=cds-WP_012175707.1;Parent=gene-DOLE_RS11775;Dbxref=Genbank:WP_012175707.1;Name=WP_012175707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11775;product=hypothetical protein;protein_id=WP_012175707.1;transl_table=11 NC_009943.1 RefSeq gene 2778808 2780721 . + . ID=gene-DOLE_RS11780;Name=DOLE_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11780;old_locus_tag=Dole_2292 NC_009943.1 Protein Homology CDS 2778808 2780721 . + 0 ID=cds-WP_012175708.1;Parent=gene-DOLE_RS11780;Dbxref=Genbank:WP_012175708.1;Name=WP_012175708.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=DOLE_RS11780;product=cation:proton antiporter;protein_id=WP_012175708.1;transl_table=11 NC_009943.1 RefSeq gene 2780737 2781522 . - . ID=gene-DOLE_RS11785;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=DOLE_RS11785;old_locus_tag=Dole_2293 NC_009943.1 Protein Homology CDS 2780737 2781522 . - 0 ID=cds-WP_012175709.1;Parent=gene-DOLE_RS11785;Dbxref=Genbank:WP_012175709.1;Name=WP_012175709.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948928.1;locus_tag=DOLE_RS11785;product=acetolactate decarboxylase;protein_id=WP_012175709.1;transl_table=11 NC_009943.1 RefSeq gene 2781858 2783201 . - . ID=gene-DOLE_RS11790;Name=DOLE_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11790;old_locus_tag=Dole_2294 NC_009943.1 Protein Homology CDS 2781858 2783201 . - 0 ID=cds-WP_012175710.1;Parent=gene-DOLE_RS11790;Dbxref=Genbank:WP_012175710.1;Name=WP_012175710.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724064.1;locus_tag=DOLE_RS11790;product=FAD-dependent oxidoreductase;protein_id=WP_012175710.1;transl_table=11 NC_009943.1 RefSeq gene 2783256 2783810 . - . ID=gene-DOLE_RS11795;Name=DOLE_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11795;old_locus_tag=Dole_2295 NC_009943.1 Protein Homology CDS 2783256 2783810 . - 0 ID=cds-WP_012175711.1;Parent=gene-DOLE_RS11795;Dbxref=Genbank:WP_012175711.1;Name=WP_012175711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023696.2;locus_tag=DOLE_RS11795;product=DUF3617 family protein;protein_id=WP_012175711.1;transl_table=11 NC_009943.1 RefSeq gene 2783884 2784696 . - . ID=gene-DOLE_RS11800;Name=DOLE_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11800;old_locus_tag=Dole_2296 NC_009943.1 Protein Homology CDS 2783884 2784696 . - 0 ID=cds-WP_012175712.1;Parent=gene-DOLE_RS11800;Dbxref=Genbank:WP_012175712.1;Name=WP_012175712.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904149.1;locus_tag=DOLE_RS11800;product=mechanosensitive ion channel;protein_id=WP_012175712.1;transl_table=11 NC_009943.1 RefSeq gene 2784800 2785915 . - . ID=gene-DOLE_RS11805;Name=DOLE_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11805;old_locus_tag=Dole_2297 NC_009943.1 Protein Homology CDS 2784800 2785915 . - 0 ID=cds-WP_041281122.1;Parent=gene-DOLE_RS11805;Dbxref=Genbank:WP_041281122.1;Name=WP_041281122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876251.1;locus_tag=DOLE_RS11805;product=DUF362 domain-containing protein;protein_id=WP_041281122.1;transl_table=11 NC_009943.1 RefSeq gene 2786129 2786500 . - . ID=gene-DOLE_RS11810;Name=DOLE_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11810;old_locus_tag=Dole_2298 NC_009943.1 Protein Homology CDS 2786129 2786500 . - 0 ID=cds-WP_012175714.1;Parent=gene-DOLE_RS11810;Dbxref=Genbank:WP_012175714.1;Name=WP_012175714.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175714.1;locus_tag=DOLE_RS11810;product=YraN family protein;protein_id=WP_012175714.1;transl_table=11 NC_009943.1 RefSeq gene 2786616 2787962 . + . ID=gene-DOLE_RS11815;Name=DOLE_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11815;old_locus_tag=Dole_2299 NC_009943.1 Protein Homology CDS 2786616 2787962 . + 0 ID=cds-WP_012175715.1;Parent=gene-DOLE_RS11815;Dbxref=Genbank:WP_012175715.1;Name=WP_012175715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174624.1;locus_tag=DOLE_RS11815;product=phenylacetate--CoA ligase family protein;protein_id=WP_012175715.1;transl_table=11 NC_009943.1 RefSeq gene 2787973 2789409 . - . ID=gene-DOLE_RS11820;Name=DOLE_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11820;old_locus_tag=Dole_2300 NC_009943.1 Protein Homology CDS 2787973 2789409 . - 0 ID=cds-WP_167320876.1;Parent=gene-DOLE_RS11820;Dbxref=Genbank:WP_167320876.1;Name=WP_167320876.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014073.2;locus_tag=DOLE_RS11820;product=tripartite tricarboxylate transporter permease;protein_id=WP_167320876.1;transl_table=11 NC_009943.1 RefSeq gene 2789567 2790580 . - . ID=gene-DOLE_RS11825;Name=DOLE_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11825;old_locus_tag=Dole_2301 NC_009943.1 Protein Homology CDS 2789567 2790580 . - 0 ID=cds-WP_012175717.1;Parent=gene-DOLE_RS11825;Dbxref=Genbank:WP_012175717.1;Name=WP_012175717.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015366.2;locus_tag=DOLE_RS11825;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_012175717.1;transl_table=11 NC_009943.1 RefSeq gene 2790600 2791433 . - . ID=gene-DOLE_RS11830;Name=DOLE_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11830;old_locus_tag=Dole_2302 NC_009943.1 GeneMarkS-2+ CDS 2790600 2791433 . - 0 ID=cds-WP_012175718.1;Parent=gene-DOLE_RS11830;Dbxref=Genbank:WP_012175718.1;Name=WP_012175718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11830;product=class I SAM-dependent methyltransferase;protein_id=WP_012175718.1;transl_table=11 NC_009943.1 RefSeq gene 2791653 2792240 . - . ID=gene-DOLE_RS11835;Name=DOLE_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11835;old_locus_tag=Dole_2303 NC_009943.1 Protein Homology CDS 2791653 2792240 . - 0 ID=cds-WP_012175719.1;Parent=gene-DOLE_RS11835;Dbxref=Genbank:WP_012175719.1;Name=WP_012175719.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876554.1;locus_tag=DOLE_RS11835;product=ribonuclease HII;protein_id=WP_012175719.1;transl_table=11 NC_009943.1 RefSeq gene 2792298 2792651 . - . ID=gene-DOLE_RS11840;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=DOLE_RS11840;old_locus_tag=Dole_2304 NC_009943.1 Protein Homology CDS 2792298 2792651 . - 0 ID=cds-WP_012175720.1;Parent=gene-DOLE_RS11840;Dbxref=Genbank:WP_012175720.1;Name=WP_012175720.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175720.1;locus_tag=DOLE_RS11840;product=50S ribosomal protein L19;protein_id=WP_012175720.1;transl_table=11 NC_009943.1 RefSeq gene 2792717 2793289 . - . ID=gene-DOLE_RS11845;Name=DOLE_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11845;old_locus_tag=Dole_2305 NC_009943.1 Protein Homology CDS 2792717 2793289 . - 0 ID=cds-WP_012175721.1;Parent=gene-DOLE_RS11845;Dbxref=Genbank:WP_012175721.1;Name=WP_012175721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405556.1;locus_tag=DOLE_RS11845;product=RNA methyltransferase;protein_id=WP_012175721.1;transl_table=11 NC_009943.1 RefSeq gene 2793276 2794028 . - . ID=gene-DOLE_RS11850;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=DOLE_RS11850;old_locus_tag=Dole_2306 NC_009943.1 Protein Homology CDS 2793276 2794028 . - 0 ID=cds-WP_041280534.1;Parent=gene-DOLE_RS11850;Dbxref=Genbank:WP_041280534.1;Name=WP_041280534.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958699.1;locus_tag=DOLE_RS11850;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_041280534.1;transl_table=11 NC_009943.1 RefSeq gene 2794397 2794909 . - . ID=gene-DOLE_RS11855;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=DOLE_RS11855;old_locus_tag=Dole_2307 NC_009943.1 Protein Homology CDS 2794397 2794909 . - 0 ID=cds-WP_012175723.1;Parent=gene-DOLE_RS11855;Dbxref=Genbank:WP_012175723.1;Name=WP_012175723.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: protein motif:HMM:TIGR02273.1;locus_tag=DOLE_RS11855;product=ribosome maturation factor RimM;protein_id=WP_012175723.1;transl_table=11 NC_009943.1 RefSeq gene 2794918 2795148 . - . ID=gene-DOLE_RS11860;Name=DOLE_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11860;old_locus_tag=Dole_2308 NC_009943.1 Protein Homology CDS 2794918 2795148 . - 0 ID=cds-WP_041281124.1;Parent=gene-DOLE_RS11860;Dbxref=Genbank:WP_041281124.1;Name=WP_041281124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958697.1;locus_tag=DOLE_RS11860;product=KH domain-containing protein;protein_id=WP_041281124.1;transl_table=11 NC_009943.1 RefSeq gene 2795304 2795552 . - . ID=gene-DOLE_RS11865;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=DOLE_RS11865;old_locus_tag=Dole_2309 NC_009943.1 Protein Homology CDS 2795304 2795552 . - 0 ID=cds-WP_012175725.1;Parent=gene-DOLE_RS11865;Dbxref=Genbank:WP_012175725.1;Name=WP_012175725.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175725.1;locus_tag=DOLE_RS11865;product=30S ribosomal protein S16;protein_id=WP_012175725.1;transl_table=11 NC_009943.1 RefSeq gene 2795568 2796899 . - . ID=gene-DOLE_RS11870;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=DOLE_RS11870;old_locus_tag=Dole_2310 NC_009943.1 Protein Homology CDS 2795568 2796899 . - 0 ID=cds-WP_012175726.1;Parent=gene-DOLE_RS11870;Dbxref=Genbank:WP_012175726.1;Name=WP_012175726.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958695.1;locus_tag=DOLE_RS11870;product=signal recognition particle protein;protein_id=WP_012175726.1;transl_table=11 NC_009943.1 RefSeq gene 2797071 2798186 . + . ID=gene-DOLE_RS11875;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=DOLE_RS11875;old_locus_tag=Dole_2311 NC_009943.1 Protein Homology CDS 2797071 2798186 . + 0 ID=cds-WP_012175727.1;Parent=gene-DOLE_RS11875;Dbxref=Genbank:WP_012175727.1;Name=WP_012175727.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175727.1;locus_tag=DOLE_RS11875;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_012175727.1;transl_table=11 NC_009943.1 RefSeq gene 2798196 2798792 . + . ID=gene-DOLE_RS11880;Name=cyaB;gbkey=Gene;gene=cyaB;gene_biotype=protein_coding;locus_tag=DOLE_RS11880;old_locus_tag=Dole_2312 NC_009943.1 Protein Homology CDS 2798196 2798792 . + 0 ID=cds-WP_012175728.1;Parent=gene-DOLE_RS11880;Dbxref=Genbank:WP_012175728.1;Name=WP_012175728.1;gbkey=CDS;gene=cyaB;inference=COORDINATES: protein motif:HMM:NF014038.2;locus_tag=DOLE_RS11880;product=class IV adenylate cyclase;protein_id=WP_012175728.1;transl_table=11 NC_009943.1 RefSeq gene 2799019 2800551 . + . ID=gene-DOLE_RS11885;Name=DOLE_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11885;old_locus_tag=Dole_2313 NC_009943.1 Protein Homology CDS 2799019 2800551 . + 0 ID=cds-WP_012175729.1;Parent=gene-DOLE_RS11885;Dbxref=Genbank:WP_012175729.1;Name=WP_012175729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964589.1;locus_tag=DOLE_RS11885;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_012175729.1;transl_table=11 NC_009943.1 RefSeq gene 2800958 2801425 . + . ID=gene-DOLE_RS11890;Name=DOLE_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11890;old_locus_tag=Dole_2314 NC_009943.1 Protein Homology CDS 2800958 2801425 . + 0 ID=cds-WP_012175730.1;Parent=gene-DOLE_RS11890;Dbxref=Genbank:WP_012175730.1;Name=WP_012175730.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=DOLE_RS11890;product=response regulator;protein_id=WP_012175730.1;transl_table=11 NC_009943.1 RefSeq gene 2801764 2803140 . + . ID=gene-DOLE_RS11895;Name=DOLE_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11895;old_locus_tag=Dole_2315 NC_009943.1 Protein Homology CDS 2801764 2803140 . + 0 ID=cds-WP_012175731.1;Parent=gene-DOLE_RS11895;Dbxref=Genbank:WP_012175731.1;Name=WP_012175731.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS11895;product=diguanylate cyclase;protein_id=WP_012175731.1;transl_table=11 NC_009943.1 RefSeq gene 2803447 2803686 . + . ID=gene-DOLE_RS11900;Name=DOLE_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11900;old_locus_tag=Dole_2316 NC_009943.1 Protein Homology CDS 2803447 2803686 . + 0 ID=cds-WP_232362703.1;Parent=gene-DOLE_RS11900;Dbxref=Genbank:WP_232362703.1;Name=WP_232362703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017353.2;locus_tag=DOLE_RS11900;product=CsbD family protein;protein_id=WP_232362703.1;transl_table=11 NC_009943.1 RefSeq gene 2803778 2803927 . + . ID=gene-DOLE_RS18225;Name=DOLE_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18225;old_locus_tag=Dole_2317 NC_009943.1 Protein Homology CDS 2803778 2803927 . + 0 ID=cds-WP_153304421.1;Parent=gene-DOLE_RS18225;Dbxref=Genbank:WP_153304421.1;Name=WP_153304421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876731.1;locus_tag=DOLE_RS18225;product=lmo0937 family membrane protein;protein_id=WP_153304421.1;transl_table=11 NC_009943.1 RefSeq gene 2803972 2804193 . + . ID=gene-DOLE_RS11905;Name=DOLE_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11905;old_locus_tag=Dole_2318 NC_009943.1 Protein Homology CDS 2803972 2804193 . + 0 ID=cds-WP_012175734.1;Parent=gene-DOLE_RS11905;Dbxref=Genbank:WP_012175734.1;Name=WP_012175734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964350.1;locus_tag=DOLE_RS11905;product=hypothetical protein;protein_id=WP_012175734.1;transl_table=11 NC_009943.1 RefSeq gene 2804247 2804636 . + . ID=gene-DOLE_RS11910;Name=DOLE_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11910;old_locus_tag=Dole_2319 NC_009943.1 Protein Homology CDS 2804247 2804636 . + 0 ID=cds-WP_232362704.1;Parent=gene-DOLE_RS11910;Dbxref=Genbank:WP_232362704.1;Name=WP_232362704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968719.1;locus_tag=DOLE_RS11910;product=putative quinol monooxygenase;protein_id=WP_232362704.1;transl_table=11 NC_009943.1 RefSeq pseudogene 2804703 2804909 . + . ID=gene-DOLE_RS17985;Name=DOLE_RS17985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DOLE_RS17985;partial=true;pseudo=true;start_range=.,2804703 NC_009943.1 Protein Homology CDS 2804703 2804909 . + 0 ID=cds-DOLE_RS17985;Parent=gene-DOLE_RS17985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018439.2;locus_tag=DOLE_RS17985;partial=true;product=DUF1207 domain-containing protein;pseudo=true;start_range=.,2804703;transl_table=11 NC_009943.1 RefSeq gene 2805177 2805488 . + . ID=gene-DOLE_RS18450;Name=DOLE_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18450;old_locus_tag=Dole_2320 NC_009943.1 Protein Homology CDS 2805177 2805488 . + 0 ID=cds-WP_012175736.1;Parent=gene-DOLE_RS18450;Dbxref=Genbank:WP_012175736.1;Name=WP_012175736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662737.1;locus_tag=DOLE_RS18450;product=hypothetical protein;protein_id=WP_012175736.1;transl_table=11 NC_009943.1 RefSeq gene 2805504 2805797 . - . ID=gene-DOLE_RS11920;Name=DOLE_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11920;old_locus_tag=Dole_2321 NC_009943.1 Protein Homology CDS 2805504 2805797 . - 0 ID=cds-WP_012175737.1;Parent=gene-DOLE_RS11920;Dbxref=Genbank:WP_012175737.1;Name=WP_012175737.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028007.2;locus_tag=DOLE_RS11920;product=FHA domain-containing protein;protein_id=WP_012175737.1;transl_table=11 NC_009943.1 RefSeq gene 2805913 2806344 . - . ID=gene-DOLE_RS11925;Name=DOLE_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11925;old_locus_tag=Dole_2322 NC_009943.1 Protein Homology CDS 2805913 2806344 . - 0 ID=cds-WP_012175738.1;Parent=gene-DOLE_RS11925;Dbxref=Genbank:WP_012175738.1;Name=WP_012175738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875111.1;locus_tag=DOLE_RS11925;product=ACT domain-containing protein;protein_id=WP_012175738.1;transl_table=11 NC_009943.1 RefSeq gene 2806380 2807681 . - . ID=gene-DOLE_RS11930;Name=DOLE_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11930;old_locus_tag=Dole_2323 NC_009943.1 Protein Homology CDS 2806380 2807681 . - 0 ID=cds-WP_012175739.1;Parent=gene-DOLE_RS11930;Dbxref=Genbank:WP_012175739.1;Name=WP_012175739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875110.1;locus_tag=DOLE_RS11930;product=phenylacetate--CoA ligase;protein_id=WP_012175739.1;transl_table=11 NC_009943.1 RefSeq gene 2807965 2808972 . - . ID=gene-DOLE_RS11935;Name=DOLE_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11935;old_locus_tag=Dole_2324 NC_009943.1 Protein Homology CDS 2807965 2808972 . - 0 ID=cds-WP_012175740.1;Parent=gene-DOLE_RS11935;Dbxref=Genbank:WP_012175740.1;Name=WP_012175740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966353.1;locus_tag=DOLE_RS11935;product=NAD-dependent epimerase;protein_id=WP_012175740.1;transl_table=11 NC_009943.1 RefSeq gene 2809063 2809377 . - . ID=gene-DOLE_RS11940;Name=DOLE_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11940;old_locus_tag=Dole_2325 NC_009943.1 GeneMarkS-2+ CDS 2809063 2809377 . - 0 ID=cds-WP_012175741.1;Parent=gene-DOLE_RS11940;Dbxref=Genbank:WP_012175741.1;Name=WP_012175741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11940;product=hypothetical protein;protein_id=WP_012175741.1;transl_table=11 NC_009943.1 RefSeq gene 2809367 2809684 . - . ID=gene-DOLE_RS11945;Name=DOLE_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11945;old_locus_tag=Dole_2326 NC_009943.1 Protein Homology CDS 2809367 2809684 . - 0 ID=cds-WP_012175742.1;Parent=gene-DOLE_RS11945;Dbxref=Genbank:WP_012175742.1;Name=WP_012175742.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016839.2;locus_tag=DOLE_RS11945;product=septum formation initiator family protein;protein_id=WP_012175742.1;transl_table=11 NC_009943.1 RefSeq gene 2809662 2811248 . - . ID=gene-DOLE_RS11950;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=DOLE_RS11950;old_locus_tag=Dole_2327 NC_009943.1 Protein Homology CDS 2809662 2811248 . - 0 ID=cds-WP_012175743.1;Parent=gene-DOLE_RS11950;Dbxref=Genbank:WP_012175743.1;Name=WP_012175743.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949139.1;locus_tag=DOLE_RS11950;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_012175743.1;transl_table=11 NC_009943.1 RefSeq gene 2811433 2812875 . - . ID=gene-DOLE_RS11955;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=DOLE_RS11955;old_locus_tag=Dole_2328 NC_009943.1 Protein Homology CDS 2811433 2812875 . - 0 ID=cds-WP_012175744.1;Parent=gene-DOLE_RS11955;Dbxref=Genbank:WP_012175744.1;Name=WP_012175744.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662976.1;locus_tag=DOLE_RS11955;product=cardiolipin synthase;protein_id=WP_012175744.1;transl_table=11 NC_009943.1 RefSeq gene 2812885 2813631 . - . ID=gene-DOLE_RS11960;Name=DOLE_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11960;old_locus_tag=Dole_2329 NC_009943.1 Protein Homology CDS 2812885 2813631 . - 0 ID=cds-WP_012175745.1;Parent=gene-DOLE_RS11960;Dbxref=Genbank:WP_012175745.1;Name=WP_012175745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662975.1;locus_tag=DOLE_RS11960;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_012175745.1;transl_table=11 NC_009943.1 RefSeq gene 2813657 2814535 . - . ID=gene-DOLE_RS11965;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=DOLE_RS11965;old_locus_tag=Dole_2330 NC_009943.1 Protein Homology CDS 2813657 2814535 . - 0 ID=cds-WP_012175746.1;Parent=gene-DOLE_RS11965;Dbxref=Genbank:WP_012175746.1;Name=WP_012175746.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610910.1;locus_tag=DOLE_RS11965;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_012175746.1;transl_table=11 NC_009943.1 RefSeq gene 2814850 2815278 . - . ID=gene-DOLE_RS11970;Name=DOLE_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11970;old_locus_tag=Dole_2331 NC_009943.1 Protein Homology CDS 2814850 2815278 . - 0 ID=cds-WP_012175747.1;Parent=gene-DOLE_RS11970;Dbxref=Genbank:WP_012175747.1;Name=WP_012175747.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020590255.1;locus_tag=DOLE_RS11970;product=response regulator;protein_id=WP_012175747.1;transl_table=11 NC_009943.1 RefSeq gene 2815341 2816009 . - . ID=gene-DOLE_RS11975;Name=DOLE_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11975;old_locus_tag=Dole_2332 NC_009943.1 GeneMarkS-2+ CDS 2815341 2816009 . - 0 ID=cds-WP_012175748.1;Parent=gene-DOLE_RS11975;Dbxref=Genbank:WP_012175748.1;Name=WP_012175748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS11975;product=HAMP domain-containing histidine kinase;protein_id=WP_012175748.1;transl_table=11 NC_009943.1 RefSeq gene 2816021 2816374 . - . ID=gene-DOLE_RS11980;Name=DOLE_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11980;old_locus_tag=Dole_2333 NC_009943.1 Protein Homology CDS 2816021 2816374 . - 0 ID=cds-WP_012175749.1;Parent=gene-DOLE_RS11980;Dbxref=Genbank:WP_012175749.1;Name=WP_012175749.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878267.1;locus_tag=DOLE_RS11980;product=response regulator;protein_id=WP_012175749.1;transl_table=11 NC_009943.1 RefSeq gene 2816371 2818218 . - . ID=gene-DOLE_RS11985;Name=DOLE_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11985;old_locus_tag=Dole_2334 NC_009943.1 Protein Homology CDS 2816371 2818218 . - 0 ID=cds-WP_232362705.1;Parent=gene-DOLE_RS11985;Dbxref=Genbank:WP_232362705.1;Name=WP_232362705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878266.1;locus_tag=DOLE_RS11985;product=ATP-binding protein;protein_id=WP_232362705.1;transl_table=11 NC_009943.1 RefSeq gene 2818172 2819407 . - . ID=gene-DOLE_RS11990;Name=DOLE_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11990;old_locus_tag=Dole_2335 NC_009943.1 Protein Homology CDS 2818172 2819407 . - 0 ID=cds-WP_012175751.1;Parent=gene-DOLE_RS11990;Dbxref=Genbank:WP_012175751.1;Name=WP_012175751.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725510.1;locus_tag=DOLE_RS11990;product=response regulator;protein_id=WP_012175751.1;transl_table=11 NC_009943.1 RefSeq gene 2819441 2821552 . - . ID=gene-DOLE_RS11995;Name=DOLE_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS11995;old_locus_tag=Dole_2336 NC_009943.1 Protein Homology CDS 2819441 2821552 . - 0 ID=cds-WP_012175752.1;Parent=gene-DOLE_RS11995;Dbxref=Genbank:WP_012175752.1;Name=WP_012175752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905828.1;locus_tag=DOLE_RS11995;product=SulP family inorganic anion transporter;protein_id=WP_012175752.1;transl_table=11 NC_009943.1 RefSeq gene 2821753 2822328 . - . ID=gene-DOLE_RS12000;Name=DOLE_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12000;old_locus_tag=Dole_2337 NC_009943.1 Protein Homology CDS 2821753 2822328 . - 0 ID=cds-WP_012175753.1;Parent=gene-DOLE_RS12000;Dbxref=Genbank:WP_012175753.1;Name=WP_012175753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020590249.1;locus_tag=DOLE_RS12000;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175753.1;transl_table=11 NC_009943.1 RefSeq gene 2822594 2823199 . + . ID=gene-DOLE_RS12005;Name=DOLE_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12005;old_locus_tag=Dole_2338 NC_009943.1 Protein Homology CDS 2822594 2823199 . + 0 ID=cds-WP_012175754.1;Parent=gene-DOLE_RS12005;Dbxref=Genbank:WP_012175754.1;Name=WP_012175754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876996.1;locus_tag=DOLE_RS12005;product=CBS domain-containing protein;protein_id=WP_012175754.1;transl_table=11 NC_009943.1 RefSeq gene 2823196 2824617 . + . ID=gene-DOLE_RS12010;Name=DOLE_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12010;old_locus_tag=Dole_2339 NC_009943.1 Protein Homology CDS 2823196 2824617 . + 0 ID=cds-WP_012175755.1;Parent=gene-DOLE_RS12010;Dbxref=Genbank:WP_012175755.1;Name=WP_012175755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905818.1;locus_tag=DOLE_RS12010;product=transferase;protein_id=WP_012175755.1;transl_table=11 NC_009943.1 RefSeq gene 2825044 2825601 . + . ID=gene-DOLE_RS12015;Name=DOLE_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12015;old_locus_tag=Dole_2340 NC_009943.1 Protein Homology CDS 2825044 2825601 . + 0 ID=cds-WP_012175756.1;Parent=gene-DOLE_RS12015;Dbxref=Genbank:WP_012175756.1;Name=WP_012175756.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022018.2;locus_tag=DOLE_RS12015;product=ORF6N domain-containing protein;protein_id=WP_012175756.1;transl_table=11 NC_009943.1 RefSeq gene 2825704 2826036 . + . ID=gene-DOLE_RS12020;Name=DOLE_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12020;old_locus_tag=Dole_2341 NC_009943.1 Protein Homology CDS 2825704 2826036 . + 0 ID=cds-WP_012175757.1;Parent=gene-DOLE_RS12020;Dbxref=Genbank:WP_012175757.1;Name=WP_012175757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968007.1;locus_tag=DOLE_RS12020;product=cupin domain-containing protein;protein_id=WP_012175757.1;transl_table=11 NC_009943.1 RefSeq gene 2826090 2826323 . + . ID=gene-DOLE_RS12025;Name=DOLE_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12025;old_locus_tag=Dole_2342 NC_009943.1 Protein Homology CDS 2826090 2826323 . + 0 ID=cds-WP_012175758.1;Parent=gene-DOLE_RS12025;Dbxref=Genbank:WP_012175758.1;Name=WP_012175758.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024064.2;locus_tag=DOLE_RS12025;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_012175758.1;transl_table=11 NC_009943.1 RefSeq gene 2826326 2826709 . + . ID=gene-DOLE_RS12030;Name=DOLE_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12030;old_locus_tag=Dole_2343 NC_009943.1 Protein Homology CDS 2826326 2826709 . + 0 ID=cds-WP_041280537.1;Parent=gene-DOLE_RS12030;Dbxref=Genbank:WP_041280537.1;Name=WP_041280537.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=DOLE_RS12030;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_041280537.1;transl_table=11 NC_009943.1 RefSeq gene 2826697 2826843 . - . ID=gene-DOLE_RS18235;Name=DOLE_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18235;old_locus_tag=Dole_2344 NC_009943.1 GeneMarkS-2+ CDS 2826697 2826843 . - 0 ID=cds-WP_012175760.1;Parent=gene-DOLE_RS18235;Dbxref=Genbank:WP_012175760.1;Name=WP_012175760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18235;product=hypothetical protein;protein_id=WP_012175760.1;transl_table=11 NC_009943.1 RefSeq gene 2827238 2827879 . + . ID=gene-DOLE_RS17515;Name=DOLE_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17515;old_locus_tag=Dole_2345 NC_009943.1 GeneMarkS-2+ CDS 2827238 2827879 . + 0 ID=cds-WP_052294299.1;Parent=gene-DOLE_RS17515;Dbxref=Genbank:WP_052294299.1;Name=WP_052294299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17515;product=hypothetical protein;protein_id=WP_052294299.1;transl_table=11 NC_009943.1 RefSeq gene 2827869 2830457 . + . ID=gene-DOLE_RS12035;Name=DOLE_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12035;old_locus_tag=Dole_2346 NC_009943.1 GeneMarkS-2+ CDS 2827869 2830457 . + 0 ID=cds-WP_012175762.1;Parent=gene-DOLE_RS12035;Dbxref=Genbank:WP_012175762.1;Name=WP_012175762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12035;product=hypothetical protein;protein_id=WP_012175762.1;transl_table=11 NC_009943.1 RefSeq gene 2830606 2830923 . + . ID=gene-DOLE_RS12040;Name=DOLE_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12040;old_locus_tag=Dole_2347 NC_009943.1 Protein Homology CDS 2830606 2830923 . + 0 ID=cds-WP_012175763.1;Parent=gene-DOLE_RS12040;Dbxref=Genbank:WP_012175763.1;Name=WP_012175763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968007.1;locus_tag=DOLE_RS12040;product=cupin domain-containing protein;protein_id=WP_012175763.1;transl_table=11 NC_009943.1 RefSeq gene 2830942 2833110 . - . ID=gene-DOLE_RS12045;Name=DOLE_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12045;old_locus_tag=Dole_2348 NC_009943.1 Protein Homology CDS 2830942 2833110 . - 0 ID=cds-WP_012175764.1;Parent=gene-DOLE_RS12045;Dbxref=Genbank:WP_012175764.1;Name=WP_012175764.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877666.1;locus_tag=DOLE_RS12045;product=ATP-dependent RecD-like DNA helicase;protein_id=WP_012175764.1;transl_table=11 NC_009943.1 RefSeq gene 2833282 2834559 . - . ID=gene-DOLE_RS12050;Name=DOLE_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12050;old_locus_tag=Dole_2349 NC_009943.1 Protein Homology CDS 2833282 2834559 . - 0 ID=cds-WP_012175765.1;Parent=gene-DOLE_RS12050;Dbxref=Genbank:WP_012175765.1;Name=WP_012175765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947225.1;locus_tag=DOLE_RS12050;product=DEAD/DEAH box helicase;protein_id=WP_012175765.1;transl_table=11 NC_009943.1 RefSeq gene 2835249 2835812 . - . ID=gene-DOLE_RS12060;Name=DOLE_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12060;old_locus_tag=Dole_2350 NC_009943.1 Protein Homology CDS 2835249 2835812 . - 0 ID=cds-WP_012175766.1;Parent=gene-DOLE_RS12060;Dbxref=Genbank:WP_012175766.1;Name=WP_012175766.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014056.2;locus_tag=DOLE_RS12060;product=DUF99 family protein;protein_id=WP_012175766.1;transl_table=11 NC_009943.1 RefSeq gene 2836032 2836793 . + . ID=gene-DOLE_RS12065;Name=DOLE_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12065;old_locus_tag=Dole_2351 NC_009943.1 Protein Homology CDS 2836032 2836793 . + 0 ID=cds-WP_012175767.1;Parent=gene-DOLE_RS12065;Dbxref=Genbank:WP_012175767.1;Name=WP_012175767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875094.1;locus_tag=DOLE_RS12065;product=imidazole glycerol phosphate synthase cyclase subunit;protein_id=WP_012175767.1;transl_table=11 NC_009943.1 RefSeq gene 2836808 2838295 . + . ID=gene-DOLE_RS12070;Name=DOLE_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12070;old_locus_tag=Dole_2352 NC_009943.1 Protein Homology CDS 2836808 2838295 . + 0 ID=cds-WP_012175768.1;Parent=gene-DOLE_RS12070;Dbxref=Genbank:WP_012175768.1;Name=WP_012175768.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013739.2;locus_tag=DOLE_RS12070;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_012175768.1;transl_table=11 NC_009943.1 RefSeq gene 2838320 2838958 . - . ID=gene-DOLE_RS12075;Name=DOLE_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12075;old_locus_tag=Dole_2353 NC_009943.1 Protein Homology CDS 2838320 2838958 . - 0 ID=cds-WP_012175769.1;Parent=gene-DOLE_RS12075;Dbxref=Genbank:WP_012175769.1;Name=WP_012175769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163038.1;locus_tag=DOLE_RS12075;product=histidinol phosphate phosphatase domain-containing protein;protein_id=WP_012175769.1;transl_table=11 NC_009943.1 RefSeq gene 2838995 2839498 . - . ID=gene-DOLE_RS12080;Name=DOLE_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12080;old_locus_tag=Dole_2354 NC_009943.1 Protein Homology CDS 2838995 2839498 . - 0 ID=cds-WP_012175770.1;Parent=gene-DOLE_RS12080;Dbxref=Genbank:WP_012175770.1;Name=WP_012175770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875234.1;locus_tag=DOLE_RS12080;product=bifunctional nuclease family protein;protein_id=WP_012175770.1;transl_table=11 NC_009943.1 RefSeq gene 2839488 2840888 . - . ID=gene-DOLE_RS12085;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=DOLE_RS12085;old_locus_tag=Dole_2355 NC_009943.1 Protein Homology CDS 2839488 2840888 . - 0 ID=cds-WP_012175771.1;Parent=gene-DOLE_RS12085;Dbxref=Genbank:WP_012175771.1;Name=WP_012175771.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175771.1;locus_tag=DOLE_RS12085;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_012175771.1;transl_table=11 NC_009943.1 RefSeq gene 2840906 2841325 . - . ID=gene-DOLE_RS12090;Name=DOLE_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12090;old_locus_tag=Dole_2356 NC_009943.1 GeneMarkS-2+ CDS 2840906 2841325 . - 0 ID=cds-WP_012175772.1;Parent=gene-DOLE_RS12090;Dbxref=Genbank:WP_012175772.1;Name=WP_012175772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12090;product=hypothetical protein;protein_id=WP_012175772.1;transl_table=11 NC_009943.1 RefSeq gene 2841368 2841616 . - . ID=gene-DOLE_RS12095;Name=DOLE_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12095;old_locus_tag=Dole_2357 NC_009943.1 Protein Homology CDS 2841368 2841616 . - 0 ID=cds-WP_012175773.1;Parent=gene-DOLE_RS12095;Dbxref=Genbank:WP_012175773.1;Name=WP_012175773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875236.1;locus_tag=DOLE_RS12095;product=DUF4911 domain-containing protein;protein_id=WP_012175773.1;transl_table=11 NC_009943.1 RefSeq gene 2841662 2842225 . - . ID=gene-DOLE_RS12100;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=DOLE_RS12100;old_locus_tag=Dole_2358 NC_009943.1 Protein Homology CDS 2841662 2842225 . - 0 ID=cds-WP_012175774.1;Parent=gene-DOLE_RS12100;Dbxref=Genbank:WP_012175774.1;Name=WP_012175774.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175774.1;locus_tag=DOLE_RS12100;product=elongation factor P;protein_id=WP_012175774.1;transl_table=11 NC_009943.1 RefSeq gene 2842309 2843091 . - . ID=gene-DOLE_RS12105;Name=DOLE_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12105;old_locus_tag=Dole_2359 NC_009943.1 Protein Homology CDS 2842309 2843091 . - 0 ID=cds-WP_012175775.1;Parent=gene-DOLE_RS12105;Dbxref=Genbank:WP_012175775.1;Name=WP_012175775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012900.2;locus_tag=DOLE_RS12105;product=N-(5'-phosphoribosyl)anthranilate isomerase;protein_id=WP_012175775.1;transl_table=11 NC_009943.1 RefSeq gene 2843103 2845136 . - . ID=gene-DOLE_RS12110;Name=DOLE_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12110;old_locus_tag=Dole_2360 NC_009943.1 Protein Homology CDS 2843103 2845136 . - 0 ID=cds-WP_012175776.1;Parent=gene-DOLE_RS12110;Dbxref=Genbank:WP_012175776.1;Name=WP_012175776.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016612.2;locus_tag=DOLE_RS12110;product=neutral/alkaline non-lysosomal ceramidase N-terminal domain-containing protein;protein_id=WP_012175776.1;transl_table=11 NC_009943.1 RefSeq gene 2845120 2845902 . - . ID=gene-DOLE_RS17520;Name=DOLE_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17520;old_locus_tag=Dole_2361 NC_009943.1 Protein Homology CDS 2845120 2845902 . - 0 ID=cds-WP_052294300.1;Parent=gene-DOLE_RS17520;Dbxref=Genbank:WP_052294300.1;Name=WP_052294300.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:TIGR01444.1;locus_tag=DOLE_RS17520;product=FkbM family methyltransferase;protein_id=WP_052294300.1;transl_table=11 NC_009943.1 RefSeq gene 2846056 2846976 . + . ID=gene-DOLE_RS12120;Name=DOLE_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12120;old_locus_tag=Dole_2362 NC_009943.1 Protein Homology CDS 2846056 2846976 . + 0 ID=cds-WP_041280539.1;Parent=gene-DOLE_RS12120;Dbxref=Genbank:WP_041280539.1;Name=WP_041280539.1;Ontology_term=GO:0006508,GO:0004175,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=endopeptidase activity|0004175||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013446.2;locus_tag=DOLE_RS12120;product=omptin family outer membrane protease;protein_id=WP_041280539.1;transl_table=11 NC_009943.1 RefSeq gene 2847020 2847763 . - . ID=gene-DOLE_RS12125;Name=DOLE_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12125;old_locus_tag=Dole_2363 NC_009943.1 Protein Homology CDS 2847020 2847763 . - 0 ID=cds-WP_012175779.1;Parent=gene-DOLE_RS12125;Dbxref=Genbank:WP_012175779.1;Name=WP_012175779.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013972.2;locus_tag=DOLE_RS12125;product=START domain-containing protein;protein_id=WP_012175779.1;transl_table=11 NC_009943.1 RefSeq gene 2847979 2849040 . + . ID=gene-DOLE_RS12130;Name=DOLE_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12130;old_locus_tag=Dole_2364 NC_009943.1 Protein Homology CDS 2847979 2849040 . + 0 ID=cds-WP_012175780.1;Parent=gene-DOLE_RS12130;Dbxref=Genbank:WP_012175780.1;Name=WP_012175780.1;Ontology_term=GO:0098662,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: protein motif:HMM:TIGR00367.1;locus_tag=DOLE_RS12130;product=calcium/sodium antiporter;protein_id=WP_012175780.1;transl_table=11 NC_009943.1 RefSeq gene 2849207 2849977 . - . ID=gene-DOLE_RS12135;Name=DOLE_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12135;old_locus_tag=Dole_2365 NC_009943.1 Protein Homology CDS 2849207 2849977 . - 0 ID=cds-WP_012175781.1;Parent=gene-DOLE_RS12135;Dbxref=Genbank:WP_012175781.1;Name=WP_012175781.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609209.1;locus_tag=DOLE_RS12135;product=enoyl-CoA hydratase-related protein;protein_id=WP_012175781.1;transl_table=11 NC_009943.1 RefSeq gene 2850075 2851880 . - . ID=gene-DOLE_RS12140;Name=DOLE_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12140;old_locus_tag=Dole_2366 NC_009943.1 Protein Homology CDS 2850075 2851880 . - 0 ID=cds-WP_012175782.1;Parent=gene-DOLE_RS12140;Dbxref=Genbank:WP_012175782.1;Name=WP_012175782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906674.1;locus_tag=DOLE_RS12140;product=acyl-CoA dehydrogenase;protein_id=WP_012175782.1;transl_table=11 NC_009943.1 RefSeq gene 2851935 2852543 . - . ID=gene-DOLE_RS12145;Name=DOLE_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12145;old_locus_tag=Dole_2367 NC_009943.1 Protein Homology CDS 2851935 2852543 . - 0 ID=cds-WP_012175783.1;Parent=gene-DOLE_RS12145;Dbxref=Genbank:WP_012175783.1;Name=WP_012175783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905383.1;locus_tag=DOLE_RS12145;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175783.1;transl_table=11 NC_009943.1 RefSeq gene 2852753 2853805 . - . ID=gene-DOLE_RS12150;Name=DOLE_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12150;old_locus_tag=Dole_2368 NC_009943.1 Protein Homology CDS 2852753 2853805 . - 0 ID=cds-WP_041280540.1;Parent=gene-DOLE_RS12150;Dbxref=Genbank:WP_041280540.1;Name=WP_041280540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.2;locus_tag=DOLE_RS12150;product=ParB N-terminal domain-containing protein;protein_id=WP_041280540.1;transl_table=11 NC_009943.1 RefSeq gene 2853845 2854726 . - . ID=gene-DOLE_RS12155;Name=DOLE_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12155;old_locus_tag=Dole_2369 NC_009943.1 Protein Homology CDS 2853845 2854726 . - 0 ID=cds-WP_012175785.1;Parent=gene-DOLE_RS12155;Dbxref=Genbank:WP_012175785.1;Name=WP_012175785.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175785.1;locus_tag=DOLE_RS12155;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_012175785.1;transl_table=11 NC_009943.1 RefSeq gene 2854754 2855119 . - . ID=gene-DOLE_RS12160;Name=DOLE_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12160;old_locus_tag=Dole_2370 NC_009943.1 Protein Homology CDS 2854754 2855119 . - 0 ID=cds-WP_012175786.1;Parent=gene-DOLE_RS12160;Dbxref=Genbank:WP_012175786.1;Name=WP_012175786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS12160;product=PilZ domain-containing protein;protein_id=WP_012175786.1;transl_table=11 NC_009943.1 RefSeq gene 2855136 2856299 . - . ID=gene-DOLE_RS12165;Name=DOLE_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12165;old_locus_tag=Dole_2371 NC_009943.1 Protein Homology CDS 2855136 2856299 . - 0 ID=cds-WP_012175787.1;Parent=gene-DOLE_RS12165;Dbxref=Genbank:WP_012175787.1;Name=WP_012175787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025690.2;locus_tag=DOLE_RS12165;product=DUF4388 domain-containing protein;protein_id=WP_012175787.1;transl_table=11 NC_009943.1 RefSeq gene 2856319 2856933 . - . ID=gene-DOLE_RS12170;Name=DOLE_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12170;old_locus_tag=Dole_2372 NC_009943.1 Protein Homology CDS 2856319 2856933 . - 0 ID=cds-WP_012175788.1;Parent=gene-DOLE_RS12170;Dbxref=Genbank:WP_012175788.1;Name=WP_012175788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877557.1;locus_tag=DOLE_RS12170;product=GTPase domain-containing protein;protein_id=WP_012175788.1;transl_table=11 NC_009943.1 RefSeq gene 2857055 2857936 . - . ID=gene-DOLE_RS12175;Name=DOLE_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12175;old_locus_tag=Dole_2373 NC_009943.1 GeneMarkS-2+ CDS 2857055 2857936 . - 0 ID=cds-WP_012175789.1;Parent=gene-DOLE_RS12175;Dbxref=Genbank:WP_012175789.1;Name=WP_012175789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12175;product=hypothetical protein;protein_id=WP_012175789.1;transl_table=11 NC_009943.1 RefSeq gene 2858496 2859431 . + . ID=gene-DOLE_RS12180;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=DOLE_RS12180;old_locus_tag=Dole_2374 NC_009943.1 Protein Homology CDS 2858496 2859431 . + 0 ID=cds-WP_012175790.1;Parent=gene-DOLE_RS12180;Dbxref=Genbank:WP_012175790.1;Name=WP_012175790.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609962.1;locus_tag=DOLE_RS12180;product=malate dehydrogenase;protein_id=WP_012175790.1;transl_table=11 NC_009943.1 RefSeq gene 2859650 2861530 . - . ID=gene-DOLE_RS12185;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=DOLE_RS12185;old_locus_tag=Dole_2375 NC_009943.1 Protein Homology CDS 2859650 2861530 . - 0 ID=cds-WP_012175791.1;Parent=gene-DOLE_RS12185;Dbxref=Genbank:WP_012175791.1;Name=WP_012175791.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877560.1;locus_tag=DOLE_RS12185;product=excinuclease ABC subunit UvrC;protein_id=WP_012175791.1;transl_table=11 NC_009943.1 RefSeq gene 2861743 2863743 . - . ID=gene-DOLE_RS12190;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=DOLE_RS12190;old_locus_tag=Dole_2376 NC_009943.1 Protein Homology CDS 2861743 2863743 . - 0 ID=cds-WP_012175792.1;Parent=gene-DOLE_RS12190;Dbxref=Genbank:WP_012175792.1;Name=WP_012175792.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190006.1;locus_tag=DOLE_RS12190;product=excinuclease ABC subunit UvrB;protein_id=WP_012175792.1;transl_table=11 NC_009943.1 RefSeq gene 2863799 2864923 . - . ID=gene-DOLE_RS12195;Name=DOLE_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12195;old_locus_tag=Dole_2377 NC_009943.1 GeneMarkS-2+ CDS 2863799 2864923 . - 0 ID=cds-WP_012175793.1;Parent=gene-DOLE_RS12195;Dbxref=Genbank:WP_012175793.1;Name=WP_012175793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12195;product=hypothetical protein;protein_id=WP_012175793.1;transl_table=11 NC_009943.1 RefSeq gene 2864934 2866874 . - . ID=gene-DOLE_RS18240;Name=DOLE_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18240;old_locus_tag=Dole_2378 NC_009943.1 Protein Homology CDS 2864934 2866874 . - 0 ID=cds-WP_012175794.1;Parent=gene-DOLE_RS18240;Dbxref=Genbank:WP_012175794.1;Name=WP_012175794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019194.2;locus_tag=DOLE_RS18240;product=DUF1538 domain-containing protein;protein_id=WP_012175794.1;transl_table=11 NC_009943.1 RefSeq gene 2867073 2867480 . + . ID=gene-DOLE_RS12205;Name=DOLE_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12205;old_locus_tag=Dole_2379 NC_009943.1 Protein Homology CDS 2867073 2867480 . + 0 ID=cds-WP_012175795.1;Parent=gene-DOLE_RS12205;Dbxref=Genbank:WP_012175795.1;Name=WP_012175795.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021193.2;locus_tag=DOLE_RS12205;product=hypothetical protein;protein_id=WP_012175795.1;transl_table=11 NC_009943.1 RefSeq gene 2867502 2868734 . - . ID=gene-DOLE_RS12210;Name=DOLE_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12210;old_locus_tag=Dole_2380 NC_009943.1 Protein Homology CDS 2867502 2868734 . - 0 ID=cds-WP_012175796.1;Parent=gene-DOLE_RS12210;Dbxref=Genbank:WP_012175796.1;Name=WP_012175796.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS12210;product=diguanylate cyclase;protein_id=WP_012175796.1;transl_table=11 NC_009943.1 RefSeq gene 2868796 2870727 . - . ID=gene-DOLE_RS12215;Name=DOLE_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12215;old_locus_tag=Dole_2381 NC_009943.1 Protein Homology CDS 2868796 2870727 . - 0 ID=cds-WP_012175797.1;Parent=gene-DOLE_RS12215;Dbxref=Genbank:WP_012175797.1;Name=WP_012175797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00704.1;locus_tag=DOLE_RS12215;product=Na/Pi cotransporter family protein;protein_id=WP_012175797.1;transl_table=11 NC_009943.1 RefSeq gene 2870747 2872675 . - . ID=gene-DOLE_RS12220;Name=DOLE_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12220;old_locus_tag=Dole_2382 NC_009943.1 Protein Homology CDS 2870747 2872675 . - 0 ID=cds-WP_012175798.1;Parent=gene-DOLE_RS12220;Dbxref=Genbank:WP_012175798.1;Name=WP_012175798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.2;locus_tag=DOLE_RS12220;product=DUF4105 domain-containing protein;protein_id=WP_012175798.1;transl_table=11 NC_009943.1 RefSeq gene 2872703 2873176 . - . ID=gene-DOLE_RS12225;Name=DOLE_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12225;old_locus_tag=Dole_2383 NC_009943.1 Protein Homology CDS 2872703 2873176 . - 0 ID=cds-WP_012175799.1;Parent=gene-DOLE_RS12225;Dbxref=Genbank:WP_012175799.1;Name=WP_012175799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022666.2;locus_tag=DOLE_RS12225;product=DUF3015 family protein;protein_id=WP_012175799.1;transl_table=11 NC_009943.1 RefSeq gene 2873581 2876187 . + . ID=gene-DOLE_RS12230;Name=DOLE_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12230;old_locus_tag=Dole_2384 NC_009943.1 Protein Homology CDS 2873581 2876187 . + 0 ID=cds-WP_041280541.1;Parent=gene-DOLE_RS12230;Dbxref=Genbank:WP_041280541.1;Name=WP_041280541.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023167.2;locus_tag=DOLE_RS12230;product=YdbH domain-containing protein;protein_id=WP_041280541.1;transl_table=11 NC_009943.1 RefSeq gene 2876202 2876402 . + . ID=gene-DOLE_RS12235;Name=DOLE_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12235;old_locus_tag=Dole_2385 NC_009943.1 Protein Homology CDS 2876202 2876402 . + 0 ID=cds-WP_041280542.1;Parent=gene-DOLE_RS12235;Dbxref=Genbank:WP_041280542.1;Name=WP_041280542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949973.1;locus_tag=DOLE_RS12235;product=YnbE family lipoprotein;protein_id=WP_041280542.1;transl_table=11 NC_009943.1 RefSeq gene 2876441 2876818 . + . ID=gene-DOLE_RS12240;Name=DOLE_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12240;old_locus_tag=Dole_2386 NC_009943.1 Protein Homology CDS 2876441 2876818 . + 0 ID=cds-WP_012175802.1;Parent=gene-DOLE_RS12240;Dbxref=Genbank:WP_012175802.1;Name=WP_012175802.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018701.2;locus_tag=DOLE_RS12240;product=YdbL family protein;protein_id=WP_012175802.1;transl_table=11 NC_009943.1 RefSeq gene 2876992 2878149 . - . ID=gene-DOLE_RS12245;Name=DOLE_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12245;old_locus_tag=Dole_2387 NC_009943.1 Protein Homology CDS 2876992 2878149 . - 0 ID=cds-WP_167320877.1;Parent=gene-DOLE_RS12245;Dbxref=Genbank:WP_167320877.1;Name=WP_167320877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021134.2;locus_tag=DOLE_RS12245;product=glycosyltransferase family 87 protein;protein_id=WP_167320877.1;transl_table=11 NC_009943.1 RefSeq gene 2878373 2879773 . - . ID=gene-DOLE_RS12250;Name=DOLE_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12250;old_locus_tag=Dole_2388 NC_009943.1 Protein Homology CDS 2878373 2879773 . - 0 ID=cds-WP_167320878.1;Parent=gene-DOLE_RS12250;Dbxref=Genbank:WP_167320878.1;Name=WP_167320878.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021134.2;locus_tag=DOLE_RS12250;product=glycosyltransferase family 87 protein;protein_id=WP_167320878.1;transl_table=11 NC_009943.1 RefSeq gene 2880113 2880775 . + . ID=gene-DOLE_RS17525;Name=DOLE_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17525;old_locus_tag=Dole_2389 NC_009943.1 Protein Homology CDS 2880113 2880775 . + 0 ID=cds-WP_012175805.1;Parent=gene-DOLE_RS17525;Dbxref=Genbank:WP_012175805.1;Name=WP_012175805.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015786.2;locus_tag=DOLE_RS17525;product=class I SAM-dependent methyltransferase;protein_id=WP_012175805.1;transl_table=11 NC_009943.1 RefSeq gene 2880779 2880961 . + . ID=gene-DOLE_RS12260;Name=DOLE_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12260;old_locus_tag=Dole_2390 NC_009943.1 GeneMarkS-2+ CDS 2880779 2880961 . + 0 ID=cds-WP_012175806.1;Parent=gene-DOLE_RS12260;Dbxref=Genbank:WP_012175806.1;Name=WP_012175806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12260;product=hypothetical protein;protein_id=WP_012175806.1;transl_table=11 NC_009943.1 RefSeq gene 2880958 2881923 . + . ID=gene-DOLE_RS12265;Name=DOLE_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12265;old_locus_tag=Dole_2391 NC_009943.1 Protein Homology CDS 2880958 2881923 . + 0 ID=cds-WP_012175807.1;Parent=gene-DOLE_RS12265;Dbxref=Genbank:WP_012175807.1;Name=WP_012175807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013775.2;locus_tag=DOLE_RS12265;product=aminoglycoside phosphotransferase family protein;protein_id=WP_012175807.1;transl_table=11 NC_009943.1 RefSeq gene 2882031 2883539 . - . ID=gene-DOLE_RS12270;Name=DOLE_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12270;old_locus_tag=Dole_2392 NC_009943.1 Protein Homology CDS 2882031 2883539 . - 0 ID=cds-WP_012175808.1;Parent=gene-DOLE_RS12270;Dbxref=Genbank:WP_012175808.1;Name=WP_012175808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663081.1;locus_tag=DOLE_RS12270;product=sensor histidine kinase;protein_id=WP_012175808.1;transl_table=11 NC_009943.1 RefSeq gene 2883670 2886129 . - . ID=gene-DOLE_RS12275;Name=DOLE_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12275;old_locus_tag=Dole_2393 NC_009943.1 Protein Homology CDS 2883670 2886129 . - 0 ID=cds-WP_012175809.1;Parent=gene-DOLE_RS12275;Dbxref=Genbank:WP_012175809.1;Name=WP_012175809.1;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663080.1;locus_tag=DOLE_RS12275;product=PEP-utilizing enzyme;protein_id=WP_012175809.1;transl_table=11 NC_009943.1 RefSeq gene 2886165 2886545 . - . ID=gene-DOLE_RS12280;Name=DOLE_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12280;old_locus_tag=Dole_2394 NC_009943.1 Protein Homology CDS 2886165 2886545 . - 0 ID=cds-WP_012175810.1;Parent=gene-DOLE_RS12280;Dbxref=Genbank:WP_012175810.1;Name=WP_012175810.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663079.1;locus_tag=DOLE_RS12280;product=response regulator;protein_id=WP_012175810.1;transl_table=11 NC_009943.1 RefSeq gene 2886577 2887548 . - . ID=gene-DOLE_RS12285;Name=DOLE_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12285;old_locus_tag=Dole_2395 NC_009943.1 GeneMarkS-2+ CDS 2886577 2887548 . - 0 ID=cds-WP_012175811.1;Parent=gene-DOLE_RS12285;Dbxref=Genbank:WP_012175811.1;Name=WP_012175811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12285;product=hypothetical protein;protein_id=WP_012175811.1;transl_table=11 NC_009943.1 RefSeq gene 2887597 2888016 . - . ID=gene-DOLE_RS12290;Name=DOLE_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12290;old_locus_tag=Dole_2396 NC_009943.1 Protein Homology CDS 2887597 2888016 . - 0 ID=cds-WP_012175812.1;Parent=gene-DOLE_RS12290;Dbxref=Genbank:WP_012175812.1;Name=WP_012175812.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663077.1;locus_tag=DOLE_RS12290;product=response regulator;protein_id=WP_012175812.1;transl_table=11 NC_009943.1 RefSeq gene 2888109 2888921 . - . ID=gene-DOLE_RS12295;Name=DOLE_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12295;old_locus_tag=Dole_2397 NC_009943.1 Protein Homology CDS 2888109 2888921 . - 0 ID=cds-WP_012175813.1;Parent=gene-DOLE_RS12295;Dbxref=Genbank:WP_012175813.1;Name=WP_012175813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663076.1;locus_tag=DOLE_RS12295;product=cytidylate kinase family protein;protein_id=WP_012175813.1;transl_table=11 NC_009943.1 RefSeq gene 2888956 2889771 . - . ID=gene-DOLE_RS12300;Name=DOLE_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12300;old_locus_tag=Dole_2398 NC_009943.1 Protein Homology CDS 2888956 2889771 . - 0 ID=cds-WP_012175814.1;Parent=gene-DOLE_RS12300;Dbxref=Genbank:WP_012175814.1;Name=WP_012175814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663075.1;locus_tag=DOLE_RS12300;product=cytidylate kinase-like family protein;protein_id=WP_012175814.1;transl_table=11 NC_009943.1 RefSeq gene 2889799 2891625 . - . ID=gene-DOLE_RS12305;Name=DOLE_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12305;old_locus_tag=Dole_2399 NC_009943.1 Protein Homology CDS 2889799 2891625 . - 0 ID=cds-WP_012175815.1;Parent=gene-DOLE_RS12305;Dbxref=Genbank:WP_012175815.1;Name=WP_012175815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663074.1;locus_tag=DOLE_RS12305;product=SLC13 family permease;protein_id=WP_012175815.1;transl_table=11 NC_009943.1 RefSeq gene 2891688 2892134 . - . ID=gene-DOLE_RS12310;Name=DOLE_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12310;old_locus_tag=Dole_2400 NC_009943.1 Protein Homology CDS 2891688 2892134 . - 0 ID=cds-WP_012175816.1;Parent=gene-DOLE_RS12310;Dbxref=Genbank:WP_012175816.1;Name=WP_012175816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663073.1;locus_tag=DOLE_RS12310;product=universal stress protein;protein_id=WP_012175816.1;transl_table=11 NC_009943.1 RefSeq gene 2892349 2893698 . - . ID=gene-DOLE_RS12315;Name=DOLE_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12315;old_locus_tag=Dole_2401 NC_009943.1 Protein Homology CDS 2892349 2893698 . - 0 ID=cds-WP_012175817.1;Parent=gene-DOLE_RS12315;Dbxref=Genbank:WP_012175817.1;Name=WP_012175817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663072.1;locus_tag=DOLE_RS12315;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012175817.1;transl_table=11 NC_009943.1 RefSeq gene 2893793 2894179 . - . ID=gene-DOLE_RS12320;Name=DOLE_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12320;old_locus_tag=Dole_2402 NC_009943.1 Protein Homology CDS 2893793 2894179 . - 0 ID=cds-WP_269719166.1;Parent=gene-DOLE_RS12320;Dbxref=Genbank:WP_269719166.1;Name=WP_269719166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019349.2;locus_tag=DOLE_RS12320;product=FCD domain-containing protein;protein_id=WP_269719166.1;transl_table=11 NC_009943.1 RefSeq gene 2894180 2894470 . - . ID=gene-DOLE_RS12325;Name=DOLE_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12325;old_locus_tag=Dole_2403 NC_009943.1 Protein Homology CDS 2894180 2894470 . - 0 ID=cds-WP_012175819.1;Parent=gene-DOLE_RS12325;Dbxref=Genbank:WP_012175819.1;Name=WP_012175819.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012610.2;locus_tag=DOLE_RS12325;product=GntR family transcriptional regulator;protein_id=WP_012175819.1;transl_table=11 NC_009943.1 RefSeq gene 2894699 2896000 . + . ID=gene-DOLE_RS12330;Name=DOLE_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12330;old_locus_tag=Dole_2404 NC_009943.1 Protein Homology CDS 2894699 2896000 . + 0 ID=cds-WP_012175820.1;Parent=gene-DOLE_RS12330;Dbxref=Genbank:WP_012175820.1;Name=WP_012175820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949604.1;locus_tag=DOLE_RS12330;product=GMC family oxidoreductase;protein_id=WP_012175820.1;transl_table=11 NC_009943.1 RefSeq gene 2896051 2896797 . - . ID=gene-DOLE_RS12335;Name=DOLE_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12335;old_locus_tag=Dole_2405 NC_009943.1 Protein Homology CDS 2896051 2896797 . - 0 ID=cds-WP_012175821.1;Parent=gene-DOLE_RS12335;Dbxref=Genbank:WP_012175821.1;Name=WP_012175821.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS12335;product=glycosyltransferase family 2 protein;protein_id=WP_012175821.1;transl_table=11 NC_009943.1 RefSeq gene 2897208 2898344 . + . ID=gene-DOLE_RS17530;Name=DOLE_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17530;old_locus_tag=Dole_2406 NC_009943.1 Protein Homology CDS 2897208 2898344 . + 0 ID=cds-WP_012175822.1;Parent=gene-DOLE_RS17530;Dbxref=Genbank:WP_012175822.1;Name=WP_012175822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015190.2;locus_tag=DOLE_RS17530;product=hypothetical protein;protein_id=WP_012175822.1;transl_table=11 NC_009943.1 RefSeq gene 2898358 2899773 . - . ID=gene-DOLE_RS12345;Name=DOLE_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12345;old_locus_tag=Dole_2407 NC_009943.1 Protein Homology CDS 2898358 2899773 . - 0 ID=cds-WP_012175823.1;Parent=gene-DOLE_RS12345;Dbxref=Genbank:WP_012175823.1;Name=WP_012175823.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS12345;product=radical SAM protein;protein_id=WP_012175823.1;transl_table=11 NC_009943.1 RefSeq gene 2899888 2901468 . - . ID=gene-DOLE_RS12350;Name=DOLE_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12350;old_locus_tag=Dole_2408 NC_009943.1 Protein Homology CDS 2899888 2901468 . - 0 ID=cds-WP_012175824.1;Parent=gene-DOLE_RS12350;Dbxref=Genbank:WP_012175824.1;Name=WP_012175824.1;Ontology_term=GO:0006493,GO:0000030,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: protein motif:HMM:NF014425.2;locus_tag=DOLE_RS12350;product=phospholipid carrier-dependent glycosyltransferase;protein_id=WP_012175824.1;transl_table=11 NC_009943.1 RefSeq gene 2901477 2902241 . - . ID=gene-DOLE_RS12355;Name=DOLE_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12355;old_locus_tag=Dole_2409 NC_009943.1 Protein Homology CDS 2901477 2902241 . - 0 ID=cds-WP_153304423.1;Parent=gene-DOLE_RS12355;Dbxref=Genbank:WP_153304423.1;Name=WP_153304423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013509.2;locus_tag=DOLE_RS12355;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_153304423.1;transl_table=11 NC_009943.1 RefSeq gene 2902320 2904266 . + . ID=gene-DOLE_RS12360;Name=DOLE_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12360;old_locus_tag=Dole_2410 NC_009943.1 Protein Homology CDS 2902320 2904266 . + 0 ID=cds-WP_012175826.1;Parent=gene-DOLE_RS12360;Dbxref=Genbank:WP_012175826.1;Name=WP_012175826.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS12360;product=tetratricopeptide repeat protein;protein_id=WP_012175826.1;transl_table=11 NC_009943.1 RefSeq gene 2904305 2905792 . + . ID=gene-DOLE_RS12365;Name=DOLE_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12365;old_locus_tag=Dole_2411 NC_009943.1 Protein Homology CDS 2904305 2905792 . + 0 ID=cds-WP_041280545.1;Parent=gene-DOLE_RS12365;Dbxref=Genbank:WP_041280545.1;Name=WP_041280545.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.2;locus_tag=DOLE_RS12365;product=glycosyltransferase family 39 protein;protein_id=WP_041280545.1;transl_table=11 NC_009943.1 RefSeq gene 2905789 2906478 . + . ID=gene-DOLE_RS12370;Name=DOLE_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12370;old_locus_tag=Dole_2412 NC_009943.1 Protein Homology CDS 2905789 2906478 . + 0 ID=cds-WP_012175828.1;Parent=gene-DOLE_RS12370;Dbxref=Genbank:WP_012175828.1;Name=WP_012175828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS12370;product=glycosyltransferase family 2 protein;protein_id=WP_012175828.1;transl_table=11 NC_009943.1 RefSeq gene 2906556 2908337 . - . ID=gene-DOLE_RS12375;Name=DOLE_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12375;old_locus_tag=Dole_2413 NC_009943.1 Protein Homology CDS 2906556 2908337 . - 0 ID=cds-WP_012175829.1;Parent=gene-DOLE_RS12375;Dbxref=Genbank:WP_012175829.1;Name=WP_012175829.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024816.2;locus_tag=DOLE_RS12375;product=tetratricopeptide repeat protein;protein_id=WP_012175829.1;transl_table=11 NC_009943.1 RefSeq gene 2908334 2910103 . - . ID=gene-DOLE_RS12380;Name=DOLE_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12380;old_locus_tag=Dole_2414 NC_009943.1 Protein Homology CDS 2908334 2910103 . - 0 ID=cds-WP_012175830.1;Parent=gene-DOLE_RS12380;Dbxref=Genbank:WP_012175830.1;Name=WP_012175830.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS12380;product=tetratricopeptide repeat protein;protein_id=WP_012175830.1;transl_table=11 NC_009943.1 RefSeq gene 2910233 2912287 . - . ID=gene-DOLE_RS12385;Name=DOLE_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12385;old_locus_tag=Dole_2415 NC_009943.1 Protein Homology CDS 2910233 2912287 . - 0 ID=cds-WP_041280546.1;Parent=gene-DOLE_RS12385;Dbxref=Genbank:WP_041280546.1;Name=WP_041280546.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS12385;product=tetratricopeptide repeat protein;protein_id=WP_041280546.1;transl_table=11 NC_009943.1 RefSeq gene 2912298 2913707 . - . ID=gene-DOLE_RS12390;Name=DOLE_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12390;old_locus_tag=Dole_2416 NC_009943.1 Protein Homology CDS 2912298 2913707 . - 0 ID=cds-WP_012175832.1;Parent=gene-DOLE_RS12390;Dbxref=Genbank:WP_012175832.1;Name=WP_012175832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS12390;product=radical SAM protein;protein_id=WP_012175832.1;transl_table=11 NC_009943.1 RefSeq gene 2913887 2916175 . + . ID=gene-DOLE_RS12395;Name=DOLE_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12395;old_locus_tag=Dole_2417 NC_009943.1 Protein Homology CDS 2913887 2916175 . + 0 ID=cds-WP_012175833.1;Parent=gene-DOLE_RS12395;Dbxref=Genbank:WP_012175833.1;Name=WP_012175833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175835.1;locus_tag=DOLE_RS12395;product=tetratricopeptide repeat protein;protein_id=WP_012175833.1;transl_table=11 NC_009943.1 RefSeq gene 2916172 2918655 . + . ID=gene-DOLE_RS12400;Name=DOLE_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12400;old_locus_tag=Dole_2418 NC_009943.1 Protein Homology CDS 2916172 2918655 . + 0 ID=cds-WP_012175834.1;Parent=gene-DOLE_RS12400;Dbxref=Genbank:WP_012175834.1;Name=WP_012175834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175835.1;locus_tag=DOLE_RS12400;product=tetratricopeptide repeat protein;protein_id=WP_012175834.1;transl_table=11 NC_009943.1 RefSeq gene 2918652 2921030 . + . ID=gene-DOLE_RS12405;Name=DOLE_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12405;old_locus_tag=Dole_2419 NC_009943.1 Protein Homology CDS 2918652 2921030 . + 0 ID=cds-WP_012175835.1;Parent=gene-DOLE_RS12405;Dbxref=Genbank:WP_012175835.1;Name=WP_012175835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175834.1;locus_tag=DOLE_RS12405;product=tetratricopeptide repeat protein;protein_id=WP_012175835.1;transl_table=11 NC_009943.1 RefSeq gene 2921534 2922058 . + . ID=gene-DOLE_RS12410;Name=DOLE_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12410;old_locus_tag=Dole_2420 NC_009943.1 GeneMarkS-2+ CDS 2921534 2922058 . + 0 ID=cds-WP_012175836.1;Parent=gene-DOLE_RS12410;Dbxref=Genbank:WP_012175836.1;Name=WP_012175836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12410;product=hypothetical protein;protein_id=WP_012175836.1;transl_table=11 NC_009943.1 RefSeq gene 2922174 2922956 . + . ID=gene-DOLE_RS12415;Name=DOLE_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12415;old_locus_tag=Dole_2421 NC_009943.1 GeneMarkS-2+ CDS 2922174 2922956 . + 0 ID=cds-WP_012175837.1;Parent=gene-DOLE_RS12415;Dbxref=Genbank:WP_012175837.1;Name=WP_012175837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12415;product=hypothetical protein;protein_id=WP_012175837.1;transl_table=11 NC_009943.1 RefSeq gene 2923243 2923998 . + . ID=gene-DOLE_RS12420;Name=DOLE_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12420;old_locus_tag=Dole_2422 NC_009943.1 Protein Homology CDS 2923243 2923998 . + 0 ID=cds-WP_012175838.1;Parent=gene-DOLE_RS12420;Dbxref=Genbank:WP_012175838.1;Name=WP_012175838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015377.2;locus_tag=DOLE_RS12420;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_012175838.1;transl_table=11 NC_009943.1 RefSeq gene 2924030 2926063 . + . ID=gene-DOLE_RS12425;Name=DOLE_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12425;old_locus_tag=Dole_2423 NC_009943.1 Protein Homology CDS 2924030 2926063 . + 0 ID=cds-WP_041280548.1;Parent=gene-DOLE_RS12425;Dbxref=Genbank:WP_041280548.1;Name=WP_041280548.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016895.2;locus_tag=DOLE_RS12425;product=SH3 domain-containing protein;protein_id=WP_041280548.1;transl_table=11 NC_009943.1 RefSeq gene 2926088 2927830 . + . ID=gene-DOLE_RS12430;Name=DOLE_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12430;old_locus_tag=Dole_2424 NC_009943.1 Protein Homology CDS 2926088 2927830 . + 0 ID=cds-WP_012175840.1;Parent=gene-DOLE_RS12430;Dbxref=Genbank:WP_012175840.1;Name=WP_012175840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015316.2;locus_tag=DOLE_RS12430;product=outer membrane protein transport protein;protein_id=WP_012175840.1;transl_table=11 NC_009943.1 RefSeq gene 2928028 2929698 . + . ID=gene-DOLE_RS12435;Name=DOLE_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12435;old_locus_tag=Dole_2425 NC_009943.1 GeneMarkS-2+ CDS 2928028 2929698 . + 0 ID=cds-WP_012175841.1;Parent=gene-DOLE_RS12435;Dbxref=Genbank:WP_012175841.1;Name=WP_012175841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12435;product=WD40 repeat domain-containing protein;protein_id=WP_012175841.1;transl_table=11 NC_009943.1 RefSeq gene 2929790 2930566 . - . ID=gene-DOLE_RS12440;Name=DOLE_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12440;old_locus_tag=Dole_2426 NC_009943.1 Protein Homology CDS 2929790 2930566 . - 0 ID=cds-WP_012175842.1;Parent=gene-DOLE_RS12440;Dbxref=Genbank:WP_012175842.1;Name=WP_012175842.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175842.1;locus_tag=DOLE_RS12440;product=sulfide-dependent adenosine diphosphate thiazole synthase;protein_id=WP_012175842.1;transl_table=11 NC_009943.1 RefSeq gene 2930646 2931926 . - . ID=gene-DOLE_RS12445;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=DOLE_RS12445;old_locus_tag=Dole_2427 NC_009943.1 Protein Homology CDS 2930646 2931926 . - 0 ID=cds-WP_012175843.1;Parent=gene-DOLE_RS12445;Dbxref=Genbank:WP_012175843.1;Name=WP_012175843.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175843.1;locus_tag=DOLE_RS12445;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_012175843.1;transl_table=11 NC_009943.1 cmsearch riboswitch 2932039 2932133 . - . ID=id-NC_009943.1:2932039..2932133;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NC_009943.1 RefSeq gene 2932165 2932241 . - . ID=gene-DOLE_RS12450;Name=DOLE_RS12450;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS12450;old_locus_tag=Dole_R0037 NC_009943.1 tRNAscan-SE tRNA 2932165 2932241 . - . ID=rna-DOLE_RS12450;Parent=gene-DOLE_RS12450;anticodon=(pos:complement(2932205..2932207));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS12450;product=tRNA-Lys NC_009943.1 tRNAscan-SE exon 2932165 2932241 . - . ID=exon-DOLE_RS12450-1;Parent=rna-DOLE_RS12450;anticodon=(pos:complement(2932205..2932207));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS12450;product=tRNA-Lys NC_009943.1 RefSeq gene 2932506 2933906 . + . ID=gene-DOLE_RS12455;Name=DOLE_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12455;old_locus_tag=Dole_2428 NC_009943.1 Protein Homology CDS 2932506 2933906 . + 0 ID=cds-WP_041280549.1;Parent=gene-DOLE_RS12455;Dbxref=Genbank:WP_041280549.1;Name=WP_041280549.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS12455;product=radical SAM protein;protein_id=WP_041280549.1;transl_table=11 NC_009943.1 RefSeq gene 2934001 2935455 . + . ID=gene-DOLE_RS12460;Name=amrB;gbkey=Gene;gene=amrB;gene_biotype=protein_coding;locus_tag=DOLE_RS12460;old_locus_tag=Dole_2429 NC_009943.1 Protein Homology CDS 2934001 2935455 . + 0 ID=cds-WP_012175845.1;Parent=gene-DOLE_RS12460;Dbxref=Genbank:WP_012175845.1;Name=WP_012175845.1;gbkey=CDS;gene=amrB;inference=COORDINATES: protein motif:HMM:TIGR04336.1;locus_tag=DOLE_RS12460;product=AmmeMemoRadiSam system protein B;protein_id=WP_012175845.1;transl_table=11 NC_009943.1 RefSeq gene 2935439 2937553 . + . ID=gene-DOLE_RS12465;Name=DOLE_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12465;old_locus_tag=Dole_2430 NC_009943.1 GeneMarkS-2+ CDS 2935439 2937553 . + 0 ID=cds-WP_012175846.1;Parent=gene-DOLE_RS12465;Dbxref=Genbank:WP_012175846.1;Name=WP_012175846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12465;product=spermine synthase;protein_id=WP_012175846.1;transl_table=11 NC_009943.1 RefSeq gene 2937531 2938721 . + . ID=gene-DOLE_RS12470;Name=amrS;gbkey=Gene;gene=amrS;gene_biotype=protein_coding;locus_tag=DOLE_RS12470;old_locus_tag=Dole_2431 NC_009943.1 Protein Homology CDS 2937531 2938721 . + 0 ID=cds-WP_012175847.1;Parent=gene-DOLE_RS12470;Dbxref=Genbank:WP_012175847.1;Name=WP_012175847.1;Ontology_term=GO:0051536;gbkey=CDS;gene=amrS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:TIGR04337.1;locus_tag=DOLE_RS12470;product=AmmeMemoRadiSam system radical SAM enzyme;protein_id=WP_012175847.1;transl_table=11 NC_009943.1 RefSeq gene 2938865 2940472 . + . ID=gene-DOLE_RS12475;Name=DOLE_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12475;old_locus_tag=Dole_2432 NC_009943.1 GeneMarkS-2+ CDS 2938865 2940472 . + 0 ID=cds-WP_012175848.1;Parent=gene-DOLE_RS12475;Dbxref=Genbank:WP_012175848.1;Name=WP_012175848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12475;product=cobalamin-dependent protein;protein_id=WP_012175848.1;transl_table=11 NC_009943.1 RefSeq gene 2940502 2942010 . - . ID=gene-DOLE_RS12480;Name=DOLE_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12480;old_locus_tag=Dole_2433 NC_009943.1 Protein Homology CDS 2940502 2942010 . - 0 ID=cds-WP_012175849.1;Parent=gene-DOLE_RS12480;Dbxref=Genbank:WP_012175849.1;Name=WP_012175849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175850.1;locus_tag=DOLE_RS12480;product=radical SAM protein;protein_id=WP_012175849.1;transl_table=11 NC_009943.1 RefSeq gene 2942007 2943569 . - . ID=gene-DOLE_RS12485;Name=DOLE_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12485;old_locus_tag=Dole_2434 NC_009943.1 Protein Homology CDS 2942007 2943569 . - 0 ID=cds-WP_012175850.1;Parent=gene-DOLE_RS12485;Dbxref=Genbank:WP_012175850.1;Name=WP_012175850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175851.1;locus_tag=DOLE_RS12485;product=radical SAM protein;protein_id=WP_012175850.1;transl_table=11 NC_009943.1 RefSeq gene 2943570 2945090 . - . ID=gene-DOLE_RS12490;Name=DOLE_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12490;old_locus_tag=Dole_2435 NC_009943.1 Protein Homology CDS 2943570 2945090 . - 0 ID=cds-WP_232362706.1;Parent=gene-DOLE_RS12490;Dbxref=Genbank:WP_232362706.1;Name=WP_232362706.1;Note=Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself%2C in one of its several forms%2C or in some unusual lineages%2C dependence on a cobalamin-like analog.;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175850.1;locus_tag=DOLE_RS12490;product=cobalamin-dependent protein;protein_id=WP_232362706.1;transl_table=11 NC_009943.1 RefSeq gene 2945429 2945695 . + . ID=gene-DOLE_RS12495;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=DOLE_RS12495;old_locus_tag=Dole_2436 NC_009943.1 Protein Homology CDS 2945429 2945695 . + 0 ID=cds-WP_012175852.1;Parent=gene-DOLE_RS12495;Dbxref=Genbank:WP_012175852.1;Name=WP_012175852.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175852.1;locus_tag=DOLE_RS12495;product=30S ribosomal protein S20;protein_id=WP_012175852.1;transl_table=11 NC_009943.1 RefSeq gene 2945760 2946293 . - . ID=gene-DOLE_RS12500;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=DOLE_RS12500;old_locus_tag=Dole_2437 NC_009943.1 Protein Homology CDS 2945760 2946293 . - 0 ID=cds-WP_012175853.1;Parent=gene-DOLE_RS12500;Dbxref=Genbank:WP_012175853.1;Name=WP_012175853.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: protein motif:HMM:NF016290.2;locus_tag=DOLE_RS12500;product=LPS assembly lipoprotein LptE;protein_id=WP_012175853.1;transl_table=11 NC_009943.1 RefSeq gene 2946608 2949196 . - . ID=gene-DOLE_RS12505;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=DOLE_RS12505;old_locus_tag=Dole_2438 NC_009943.1 Protein Homology CDS 2946608 2949196 . - 0 ID=cds-WP_041281148.1;Parent=gene-DOLE_RS12505;Dbxref=Genbank:WP_041281148.1;Name=WP_041281148.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072956.1;locus_tag=DOLE_RS12505;product=leucine--tRNA ligase;protein_id=WP_041281148.1;transl_table=11 NC_009943.1 RefSeq gene 2949534 2951033 . + . ID=gene-DOLE_RS12510;Name=DOLE_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12510;old_locus_tag=Dole_2439 NC_009943.1 Protein Homology CDS 2949534 2951033 . + 0 ID=cds-WP_012175855.1;Parent=gene-DOLE_RS12510;Dbxref=Genbank:WP_012175855.1;Name=WP_012175855.1;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904575.1;locus_tag=DOLE_RS12510;product=Rne/Rng family ribonuclease;protein_id=WP_012175855.1;transl_table=11 NC_009943.1 RefSeq gene 2951123 2951905 . + . ID=gene-DOLE_RS12515;Name=DOLE_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12515;old_locus_tag=Dole_2440 NC_009943.1 GeneMarkS-2+ CDS 2951123 2951905 . + 0 ID=cds-WP_012175856.1;Parent=gene-DOLE_RS12515;Dbxref=Genbank:WP_012175856.1;Name=WP_012175856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12515;product=hypothetical protein;protein_id=WP_012175856.1;transl_table=11 NC_009943.1 RefSeq gene 2951933 2952292 . + . ID=gene-DOLE_RS12520;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=DOLE_RS12520;old_locus_tag=Dole_2441 NC_009943.1 Protein Homology CDS 2951933 2952292 . + 0 ID=cds-WP_232362707.1;Parent=gene-DOLE_RS12520;Dbxref=Genbank:WP_232362707.1;Name=WP_232362707.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588853.1;locus_tag=DOLE_RS12520;product=preprotein translocase subunit YajC;protein_id=WP_232362707.1;transl_table=11 NC_009943.1 RefSeq gene 2952318 2953892 . + . ID=gene-DOLE_RS12525;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=DOLE_RS12525;old_locus_tag=Dole_2442 NC_009943.1 Protein Homology CDS 2952318 2953892 . + 0 ID=cds-WP_012175858.1;Parent=gene-DOLE_RS12525;Dbxref=Genbank:WP_012175858.1;Name=WP_012175858.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588852.1;locus_tag=DOLE_RS12525;product=protein translocase subunit SecD;protein_id=WP_012175858.1;transl_table=11 NC_009943.1 RefSeq gene 2953917 2954960 . + . ID=gene-DOLE_RS12530;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=DOLE_RS12530;old_locus_tag=Dole_2443 NC_009943.1 Protein Homology CDS 2953917 2954960 . + 0 ID=cds-WP_012175859.1;Parent=gene-DOLE_RS12530;Dbxref=Genbank:WP_012175859.1;Name=WP_012175859.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956950.1;locus_tag=DOLE_RS12530;product=protein translocase subunit SecF;protein_id=WP_012175859.1;transl_table=11 NC_009943.1 RefSeq gene 2955310 2956479 . + . ID=gene-DOLE_RS12535;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=DOLE_RS12535;old_locus_tag=Dole_2444 NC_009943.1 Protein Homology CDS 2955310 2956479 . + 0 ID=cds-WP_012175860.1;Parent=gene-DOLE_RS12535;Dbxref=Genbank:WP_012175860.1;Name=WP_012175860.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610323.1;locus_tag=DOLE_RS12535;product=DNA-processing protein DprA;protein_id=WP_012175860.1;transl_table=11 NC_009943.1 RefSeq gene 2956710 2958986 . + . ID=gene-DOLE_RS12540;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=DOLE_RS12540;old_locus_tag=Dole_2445 NC_009943.1 Protein Homology CDS 2956710 2958986 . + 0 ID=cds-WP_012175861.1;Parent=gene-DOLE_RS12540;Dbxref=Genbank:WP_012175861.1;Name=WP_012175861.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966437.1;locus_tag=DOLE_RS12540;product=type I DNA topoisomerase;protein_id=WP_012175861.1;transl_table=11 NC_009943.1 RefSeq gene 2959008 2960819 . + . ID=gene-DOLE_RS12545;Name=DOLE_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12545;old_locus_tag=Dole_2446 NC_009943.1 Protein Homology CDS 2959008 2960819 . + 0 ID=cds-WP_012175862.1;Parent=gene-DOLE_RS12545;Dbxref=Genbank:WP_012175862.1;Name=WP_012175862.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012861.2;locus_tag=DOLE_RS12545;product=chloride channel protein;protein_id=WP_012175862.1;transl_table=11 NC_009943.1 RefSeq gene 2961221 2962543 . + . ID=gene-DOLE_RS12550;Name=DOLE_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12550;old_locus_tag=Dole_2447 NC_009943.1 Protein Homology CDS 2961221 2962543 . + 0 ID=cds-WP_083766606.1;Parent=gene-DOLE_RS12550;Dbxref=Genbank:WP_083766606.1;Name=WP_083766606.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=DOLE_RS12550;product=sensor domain-containing diguanylate cyclase;protein_id=WP_083766606.1;transl_table=11 NC_009943.1 RefSeq gene 2962653 2962991 . - . ID=gene-DOLE_RS12555;Name=DOLE_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12555;old_locus_tag=Dole_2448 NC_009943.1 Protein Homology CDS 2962653 2962991 . - 0 ID=cds-WP_012175864.1;Parent=gene-DOLE_RS12555;Dbxref=Genbank:WP_012175864.1;Name=WP_012175864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725552.1;locus_tag=DOLE_RS12555;product=histidine triad nucleotide-binding protein;protein_id=WP_012175864.1;transl_table=11 NC_009943.1 RefSeq gene 2963759 2964442 . + . ID=gene-DOLE_RS12565;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=DOLE_RS12565;old_locus_tag=Dole_2450 NC_009943.1 Protein Homology CDS 2963759 2964442 . + 0 ID=cds-WP_012175866.1;Parent=gene-DOLE_RS12565;Dbxref=Genbank:WP_012175866.1;Name=WP_012175866.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586936.1;locus_tag=DOLE_RS12565;product=cell division ATP-binding protein FtsE;protein_id=WP_012175866.1;transl_table=11 NC_009943.1 RefSeq gene 2964439 2965320 . + . ID=gene-DOLE_RS12570;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=DOLE_RS12570;old_locus_tag=Dole_2451 NC_009943.1 Protein Homology CDS 2964439 2965320 . + 0 ID=cds-WP_012175867.1;Parent=gene-DOLE_RS12570;Dbxref=Genbank:WP_012175867.1;Name=WP_012175867.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: protein motif:HMM:TIGR00439.2;locus_tag=DOLE_RS12570;product=permease-like cell division protein FtsX;protein_id=WP_012175867.1;transl_table=11 NC_009943.1 RefSeq gene 2965284 2966675 . + . ID=gene-DOLE_RS17535;Name=DOLE_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17535;old_locus_tag=Dole_2452 NC_009943.1 Protein Homology CDS 2965284 2966675 . + 0 ID=cds-WP_167320879.1;Parent=gene-DOLE_RS17535;Dbxref=Genbank:WP_167320879.1;Name=WP_167320879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.2;locus_tag=DOLE_RS17535;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_167320879.1;transl_table=11 NC_009943.1 RefSeq gene 2966725 2968092 . + . ID=gene-DOLE_RS12580;Name=DOLE_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12580;old_locus_tag=Dole_2453 NC_009943.1 Protein Homology CDS 2966725 2968092 . + 0 ID=cds-WP_012175869.1;Parent=gene-DOLE_RS12580;Dbxref=Genbank:WP_012175869.1;Name=WP_012175869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071073.1;locus_tag=DOLE_RS12580;product=S41 family peptidase;protein_id=WP_012175869.1;transl_table=11 NC_009943.1 RefSeq gene 2968117 2969064 . + . ID=gene-DOLE_RS12585;Name=DOLE_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12585;old_locus_tag=Dole_2454 NC_009943.1 Protein Homology CDS 2968117 2969064 . + 0 ID=cds-WP_012175870.1;Parent=gene-DOLE_RS12585;Dbxref=Genbank:WP_012175870.1;Name=WP_012175870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016623.2;locus_tag=DOLE_RS12585;product=divergent polysaccharide deacetylase family protein;protein_id=WP_012175870.1;transl_table=11 NC_009943.1 RefSeq gene 2969565 2970473 . - . ID=gene-DOLE_RS12590;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=DOLE_RS12590;old_locus_tag=Dole_2455 NC_009943.1 Protein Homology CDS 2969565 2970473 . - 0 ID=cds-WP_012175871.1;Parent=gene-DOLE_RS12590;Dbxref=Genbank:WP_012175871.1;Name=WP_012175871.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: protein motif:HMM:NF018076.2;locus_tag=DOLE_RS12590;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_012175871.1;transl_table=11 NC_009943.1 RefSeq gene 2970885 2971784 . + . ID=gene-DOLE_RS12595;Name=DOLE_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12595;old_locus_tag=Dole_2456 NC_009943.1 GeneMarkS-2+ CDS 2970885 2971784 . + 0 ID=cds-WP_012175872.1;Parent=gene-DOLE_RS12595;Dbxref=Genbank:WP_012175872.1;Name=WP_012175872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12595;product=hypothetical protein;protein_id=WP_012175872.1;transl_table=11 NC_009943.1 RefSeq gene 2971868 2972884 . - . ID=gene-DOLE_RS12600;Name=DOLE_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12600;old_locus_tag=Dole_2457 NC_009943.1 Protein Homology CDS 2971868 2972884 . - 0 ID=cds-WP_012175873.1;Parent=gene-DOLE_RS12600;Dbxref=Genbank:WP_012175873.1;Name=WP_012175873.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015722803.1;locus_tag=DOLE_RS12600;product=IS5 family transposase;protein_id=WP_012175873.1;transl_table=11 NC_009943.1 RefSeq gene 2973044 2977153 . + . ID=gene-DOLE_RS12605;Name=DOLE_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12605;old_locus_tag=Dole_2458 NC_009943.1 Protein Homology CDS 2973044 2977153 . + 0 ID=cds-WP_012175874.1;Parent=gene-DOLE_RS12605;Dbxref=Genbank:WP_012175874.1;Name=WP_012175874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=DOLE_RS12605;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_012175874.1;transl_table=11 NC_009943.1 RefSeq gene 2977358 2978479 . + . ID=gene-DOLE_RS12610;Name=DOLE_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12610;old_locus_tag=Dole_2459 NC_009943.1 Protein Homology CDS 2977358 2978479 . + 0 ID=cds-WP_012175875.1;Parent=gene-DOLE_RS12610;Dbxref=Genbank:WP_012175875.1;Name=WP_012175875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019239.2;locus_tag=DOLE_RS12610;product=DUF1570 domain-containing protein;protein_id=WP_012175875.1;transl_table=11 NC_009943.1 RefSeq gene 2978801 2979766 . + . ID=gene-DOLE_RS18455;Name=DOLE_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18455;old_locus_tag=Dole_2460 NC_009943.1 GeneMarkS-2+ CDS 2978801 2979766 . + 0 ID=cds-WP_167320880.1;Parent=gene-DOLE_RS18455;Dbxref=Genbank:WP_167320880.1;Name=WP_167320880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18455;product=SGNH/GDSL hydrolase family protein;protein_id=WP_167320880.1;transl_table=11 NC_009943.1 RefSeq gene 2979816 2981024 . + . ID=gene-DOLE_RS12620;Name=DOLE_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12620;old_locus_tag=Dole_2461 NC_009943.1 Protein Homology CDS 2979816 2981024 . + 0 ID=cds-WP_167320881.1;Parent=gene-DOLE_RS12620;Dbxref=Genbank:WP_167320881.1;Name=WP_167320881.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS12620;product=radical SAM protein;protein_id=WP_167320881.1;transl_table=11 NC_009943.1 RefSeq gene 2981067 2982737 . + . ID=gene-DOLE_RS12625;Name=DOLE_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12625;old_locus_tag=Dole_2462 NC_009943.1 GeneMarkS-2+ CDS 2981067 2982737 . + 0 ID=cds-WP_012175878.1;Parent=gene-DOLE_RS12625;Dbxref=Genbank:WP_012175878.1;Name=WP_012175878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12625;product=hypothetical protein;protein_id=WP_012175878.1;transl_table=11 NC_009943.1 RefSeq gene 2982820 2983767 . - . ID=gene-DOLE_RS12630;Name=DOLE_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12630;old_locus_tag=Dole_2463 NC_009943.1 Protein Homology CDS 2982820 2983767 . - 0 ID=cds-WP_012175879.1;Parent=gene-DOLE_RS12630;Dbxref=Genbank:WP_012175879.1;Name=WP_012175879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS12630;product=glycosyltransferase family 2 protein;protein_id=WP_012175879.1;transl_table=11 NC_009943.1 RefSeq gene 2983782 2984786 . - . ID=gene-DOLE_RS12635;Name=DOLE_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12635;old_locus_tag=Dole_2464 NC_009943.1 GeneMarkS-2+ CDS 2983782 2984786 . - 0 ID=cds-WP_012175880.1;Parent=gene-DOLE_RS12635;Dbxref=Genbank:WP_012175880.1;Name=WP_012175880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12635;product=GNAT family N-acetyltransferase;protein_id=WP_012175880.1;transl_table=11 NC_009943.1 RefSeq gene 2984965 2987139 . + . ID=gene-DOLE_RS18000;Name=DOLE_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18000;old_locus_tag=Dole_2465 NC_009943.1 Protein Homology CDS 2984965 2987139 . + 0 ID=cds-WP_012175881.1;Parent=gene-DOLE_RS18000;Dbxref=Genbank:WP_012175881.1;Name=WP_012175881.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013227.2;locus_tag=DOLE_RS18000;product=bifunctional SDR family oxidoreductase/aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_012175881.1;transl_table=11 NC_009943.1 RefSeq gene 2987225 2990023 . + . ID=gene-DOLE_RS12645;Name=DOLE_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12645;old_locus_tag=Dole_2466 NC_009943.1 GeneMarkS-2+ CDS 2987225 2990023 . + 0 ID=cds-WP_041280553.1;Parent=gene-DOLE_RS12645;Dbxref=Genbank:WP_041280553.1;Name=WP_041280553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12645;product=hypothetical protein;protein_id=WP_041280553.1;transl_table=11 NC_009943.1 RefSeq gene 2990007 2990762 . - . ID=gene-DOLE_RS12650;Name=DOLE_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12650;old_locus_tag=Dole_2467 NC_009943.1 Protein Homology CDS 2990007 2990762 . - 0 ID=cds-WP_012175883.1;Parent=gene-DOLE_RS12650;Dbxref=Genbank:WP_012175883.1;Name=WP_012175883.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS12650;product=polyprenol monophosphomannose synthase;protein_id=WP_012175883.1;transl_table=11 NC_009943.1 RefSeq gene 2991229 2992323 . + . ID=gene-DOLE_RS12660;Name=DOLE_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12660;old_locus_tag=Dole_2468 NC_009943.1 GeneMarkS-2+ CDS 2991229 2992323 . + 0 ID=cds-WP_041280555.1;Parent=gene-DOLE_RS12660;Dbxref=Genbank:WP_041280555.1;Name=WP_041280555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12660;product=hypothetical protein;protein_id=WP_041280555.1;transl_table=11 NC_009943.1 RefSeq gene 2992331 2993641 . + . ID=gene-DOLE_RS12665;Name=DOLE_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12665;old_locus_tag=Dole_2469 NC_009943.1 GeneMarkS-2+ CDS 2992331 2993641 . + 0 ID=cds-WP_041280556.1;Parent=gene-DOLE_RS12665;Dbxref=Genbank:WP_041280556.1;Name=WP_041280556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12665;product=hypothetical protein;protein_id=WP_041280556.1;transl_table=11 NC_009943.1 RefSeq gene 2993656 2995401 . + . ID=gene-DOLE_RS12670;Name=DOLE_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12670;old_locus_tag=Dole_2470 NC_009943.1 Protein Homology CDS 2993656 2995401 . + 0 ID=cds-WP_012175886.1;Parent=gene-DOLE_RS12670;Dbxref=Genbank:WP_012175886.1;Name=WP_012175886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS12670;product=tetratricopeptide repeat protein;protein_id=WP_012175886.1;transl_table=11 NC_009943.1 RefSeq gene 2995519 2997450 . + . ID=gene-DOLE_RS12675;Name=DOLE_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12675;old_locus_tag=Dole_2471 NC_009943.1 Protein Homology CDS 2995519 2997450 . + 0 ID=cds-WP_012175887.1;Parent=gene-DOLE_RS12675;Dbxref=Genbank:WP_012175887.1;Name=WP_012175887.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS12675;product=tetratricopeptide repeat protein;protein_id=WP_012175887.1;transl_table=11 NC_009943.1 RefSeq gene 2997559 2999082 . + . ID=gene-DOLE_RS12680;Name=DOLE_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12680;old_locus_tag=Dole_2472 NC_009943.1 Protein Homology CDS 2997559 2999082 . + 0 ID=cds-WP_012175888.1;Parent=gene-DOLE_RS12680;Dbxref=Genbank:WP_012175888.1;Name=WP_012175888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS12680;product=radical SAM protein;protein_id=WP_012175888.1;transl_table=11 NC_009943.1 RefSeq gene 2999088 3000494 . - . ID=gene-DOLE_RS12685;Name=DOLE_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12685;old_locus_tag=Dole_2473 NC_009943.1 Protein Homology CDS 2999088 3000494 . - 0 ID=cds-WP_012175889.1;Parent=gene-DOLE_RS12685;Dbxref=Genbank:WP_012175889.1;Name=WP_012175889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS12685;product=radical SAM protein;protein_id=WP_012175889.1;transl_table=11 NC_009943.1 RefSeq gene 3000661 3000737 . - . ID=gene-DOLE_RS12690;Name=DOLE_RS12690;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS12690;old_locus_tag=Dole_R0038 NC_009943.1 tRNAscan-SE tRNA 3000661 3000737 . - . ID=rna-DOLE_RS12690;Parent=gene-DOLE_RS12690;anticodon=(pos:complement(3000701..3000703));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS12690;product=tRNA-Arg NC_009943.1 tRNAscan-SE exon 3000661 3000737 . - . ID=exon-DOLE_RS12690-1;Parent=rna-DOLE_RS12690;anticodon=(pos:complement(3000701..3000703));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS12690;product=tRNA-Arg NC_009943.1 RefSeq gene 3001291 3002256 . + . ID=gene-DOLE_RS12695;Name=DOLE_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12695;old_locus_tag=Dole_2474 NC_009943.1 Protein Homology CDS 3001291 3002256 . + 0 ID=cds-WP_012175890.1;Parent=gene-DOLE_RS12695;Dbxref=Genbank:WP_012175890.1;Name=WP_012175890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609284.1;locus_tag=DOLE_RS12695;product=RNA polymerase factor sigma-32;protein_id=WP_012175890.1;transl_table=11 NC_009943.1 RefSeq gene 3002260 3004158 . + . ID=gene-DOLE_RS12700;Name=DOLE_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12700;old_locus_tag=Dole_2475 NC_009943.1 Protein Homology CDS 3002260 3004158 . + 0 ID=cds-WP_012175891.1;Parent=gene-DOLE_RS12700;Dbxref=Genbank:WP_012175891.1;Name=WP_012175891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024821.2;locus_tag=DOLE_RS12700;product=tetratricopeptide repeat protein;protein_id=WP_012175891.1;transl_table=11 NC_009943.1 RefSeq gene 3004155 3004937 . + . ID=gene-DOLE_RS12705;Name=DOLE_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12705;old_locus_tag=Dole_2476 NC_009943.1 GeneMarkS-2+ CDS 3004155 3004937 . + 0 ID=cds-WP_012175892.1;Parent=gene-DOLE_RS12705;Dbxref=Genbank:WP_012175892.1;Name=WP_012175892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12705;product=hypothetical protein;protein_id=WP_012175892.1;transl_table=11 NC_009943.1 RefSeq gene 3005456 3005896 . - . ID=gene-DOLE_RS12715;Name=DOLE_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12715;old_locus_tag=Dole_2477 NC_009943.1 Protein Homology CDS 3005456 3005896 . - 0 ID=cds-WP_167320882.1;Parent=gene-DOLE_RS12715;Dbxref=Genbank:WP_167320882.1;Name=WP_167320882.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012791.2;locus_tag=DOLE_RS12715;product=universal stress protein;protein_id=WP_167320882.1;transl_table=11 NC_009943.1 RefSeq gene 3005960 3006853 . - . ID=gene-DOLE_RS12720;Name=DOLE_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12720;old_locus_tag=Dole_2478 NC_009943.1 Protein Homology CDS 3005960 3006853 . - 0 ID=cds-WP_232362708.1;Parent=gene-DOLE_RS12720;Dbxref=Genbank:WP_232362708.1;Name=WP_232362708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877991.1;locus_tag=DOLE_RS12720;product=protein kinase;protein_id=WP_232362708.1;transl_table=11 NC_009943.1 RefSeq gene 3006878 3007447 . - . ID=gene-DOLE_RS12725;Name=DOLE_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12725;old_locus_tag=Dole_2479 NC_009943.1 Protein Homology CDS 3006878 3007447 . - 0 ID=cds-WP_012175895.1;Parent=gene-DOLE_RS12725;Dbxref=Genbank:WP_012175895.1;Name=WP_012175895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877992.1;locus_tag=DOLE_RS12725;product=GAF domain-containing protein;protein_id=WP_012175895.1;transl_table=11 NC_009943.1 RefSeq gene 3007444 3008208 . - . ID=gene-DOLE_RS12730;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=DOLE_RS12730;old_locus_tag=Dole_2480 NC_009943.1 Protein Homology CDS 3007444 3008208 . - 0 ID=cds-WP_083766613.1;Parent=gene-DOLE_RS12730;Dbxref=Genbank:WP_083766613.1;Name=WP_083766613.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946858.1;locus_tag=DOLE_RS12730;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_083766613.1;transl_table=11 NC_009943.1 RefSeq gene 3008228 3010483 . - . ID=gene-DOLE_RS12735;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=DOLE_RS12735;old_locus_tag=Dole_2481 NC_009943.1 Protein Homology CDS 3008228 3010483 . - 0 ID=cds-WP_012175897.1;Parent=gene-DOLE_RS12735;Dbxref=Genbank:WP_012175897.1;Name=WP_012175897.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013164666.1;locus_tag=DOLE_RS12735;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_012175897.1;transl_table=11 NC_009943.1 RefSeq gene 3010756 3011070 . - . ID=gene-DOLE_RS12740;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=DOLE_RS12740;old_locus_tag=Dole_2482 NC_009943.1 Protein Homology CDS 3010756 3011070 . - 0 ID=cds-WP_012175898.1;Parent=gene-DOLE_RS12740;Dbxref=Genbank:WP_012175898.1;Name=WP_012175898.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958370.1;locus_tag=DOLE_RS12740;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_012175898.1;transl_table=11 NC_009943.1 RefSeq gene 3011330 3013849 . - . ID=gene-DOLE_RS12745;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=DOLE_RS12745;old_locus_tag=Dole_2483 NC_009943.1 Protein Homology CDS 3011330 3013849 . - 0 ID=cds-WP_041281158.1;Parent=gene-DOLE_RS12745;Dbxref=Genbank:WP_041281158.1;Name=WP_041281158.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071896.1;locus_tag=DOLE_RS12745;product=preprotein translocase subunit SecA;protein_id=WP_041281158.1;transl_table=11 NC_009943.1 RefSeq gene 3014057 3014998 . - . ID=gene-DOLE_RS12750;Name=DOLE_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12750;old_locus_tag=Dole_2484 NC_009943.1 Protein Homology CDS 3014057 3014998 . - 0 ID=cds-WP_012175900.1;Parent=gene-DOLE_RS12750;Dbxref=Genbank:WP_012175900.1;Name=WP_012175900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.2;locus_tag=DOLE_RS12750;product=M23 family metallopeptidase;protein_id=WP_012175900.1;transl_table=11 NC_009943.1 RefSeq gene 3015129 3015692 . - . ID=gene-DOLE_RS12755;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=DOLE_RS12755;old_locus_tag=Dole_2485 NC_009943.1 Protein Homology CDS 3015129 3015692 . - 0 ID=cds-WP_012175901.1;Parent=gene-DOLE_RS12755;Dbxref=Genbank:WP_012175901.1;Name=WP_012175901.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875121.1;locus_tag=DOLE_RS12755;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_012175901.1;transl_table=11 NC_009943.1 RefSeq gene 3015753 3016397 . - . ID=gene-DOLE_RS12760;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=DOLE_RS12760;old_locus_tag=Dole_2486 NC_009943.1 Protein Homology CDS 3015753 3016397 . - 0 ID=cds-WP_012175902.1;Parent=gene-DOLE_RS12760;Dbxref=Genbank:WP_012175902.1;Name=WP_012175902.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175902.1;locus_tag=DOLE_RS12760;product=fructose-6-phosphate aldolase;protein_id=WP_012175902.1;transl_table=11 NC_009943.1 RefSeq gene 3016432 3016701 . - . ID=gene-DOLE_RS12765;Name=DOLE_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12765;old_locus_tag=Dole_2487 NC_009943.1 Protein Homology CDS 3016432 3016701 . - 0 ID=cds-WP_012175903.1;Parent=gene-DOLE_RS12765;Dbxref=Genbank:WP_012175903.1;Name=WP_012175903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016811.2;locus_tag=DOLE_RS12765;product=YHS domain-containing protein;protein_id=WP_012175903.1;transl_table=11 NC_009943.1 RefSeq gene 3016698 3017249 . - . ID=gene-DOLE_RS12770;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=DOLE_RS12770;old_locus_tag=Dole_2488 NC_009943.1 Protein Homology CDS 3016698 3017249 . - 0 ID=cds-WP_012175904.1;Parent=gene-DOLE_RS12770;Dbxref=Genbank:WP_012175904.1;Name=WP_012175904.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: protein motif:HMM:TIGR01498.1;locus_tag=DOLE_RS12770;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_012175904.1;transl_table=11 NC_009943.1 RefSeq gene 3017242 3017673 . - . ID=gene-DOLE_RS12775;Name=DOLE_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12775;old_locus_tag=Dole_2489 NC_009943.1 GeneMarkS-2+ CDS 3017242 3017673 . - 0 ID=cds-WP_012175905.1;Parent=gene-DOLE_RS12775;Dbxref=Genbank:WP_012175905.1;Name=WP_012175905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12775;product=hypothetical protein;protein_id=WP_012175905.1;transl_table=11 NC_009943.1 RefSeq gene 3017663 3019063 . - . ID=gene-DOLE_RS12780;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=DOLE_RS12780;old_locus_tag=Dole_2490 NC_009943.1 Protein Homology CDS 3017663 3019063 . - 0 ID=cds-WP_012175906.1;Parent=gene-DOLE_RS12780;Dbxref=Genbank:WP_012175906.1;Name=WP_012175906.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609559.1;locus_tag=DOLE_RS12780;product=argininosuccinate lyase;protein_id=WP_012175906.1;transl_table=11 NC_009943.1 RefSeq gene 3019377 3020576 . - . ID=gene-DOLE_RS12785;Name=DOLE_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12785;old_locus_tag=Dole_2491 NC_009943.1 Protein Homology CDS 3019377 3020576 . - 0 ID=cds-WP_012175907.1;Parent=gene-DOLE_RS12785;Dbxref=Genbank:WP_012175907.1;Name=WP_012175907.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402958.1;locus_tag=DOLE_RS12785;product=argininosuccinate synthase;protein_id=WP_012175907.1;transl_table=11 NC_009943.1 RefSeq gene 3020738 3021655 . - . ID=gene-DOLE_RS12790;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=DOLE_RS12790;old_locus_tag=Dole_2492 NC_009943.1 Protein Homology CDS 3020738 3021655 . - 0 ID=cds-WP_012175908.1;Parent=gene-DOLE_RS12790;Dbxref=Genbank:WP_012175908.1;Name=WP_012175908.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964871.1;locus_tag=DOLE_RS12790;product=ornithine carbamoyltransferase;protein_id=WP_012175908.1;transl_table=11 NC_009943.1 RefSeq gene 3021686 3022876 . - . ID=gene-DOLE_RS12795;Name=DOLE_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12795;old_locus_tag=Dole_2493 NC_009943.1 Protein Homology CDS 3021686 3022876 . - 0 ID=cds-WP_153304523.1;Parent=gene-DOLE_RS12795;Dbxref=Genbank:WP_153304523.1;Name=WP_153304523.1;Ontology_term=GO:0006525,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017866644.1;locus_tag=DOLE_RS12795;product=acetylornithine transaminase;protein_id=WP_153304523.1;transl_table=11 NC_009943.1 RefSeq gene 3023017 3023892 . - . ID=gene-DOLE_RS12800;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=DOLE_RS12800;old_locus_tag=Dole_2494 NC_009943.1 Protein Homology CDS 3023017 3023892 . - 0 ID=cds-WP_012175910.1;Parent=gene-DOLE_RS12800;Dbxref=Genbank:WP_012175910.1;Name=WP_012175910.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609555.1;locus_tag=DOLE_RS12800;product=acetylglutamate kinase;protein_id=WP_012175910.1;transl_table=11 NC_009943.1 RefSeq gene 3023953 3025323 . - . ID=gene-DOLE_RS12805;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=DOLE_RS12805;old_locus_tag=Dole_2495 NC_009943.1 Protein Homology CDS 3023953 3025323 . - 0 ID=cds-WP_012175911.1;Parent=gene-DOLE_RS12805;Dbxref=Genbank:WP_012175911.1;Name=WP_012175911.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175911.1;locus_tag=DOLE_RS12805;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_012175911.1;transl_table=11 NC_009943.1 RefSeq gene 3025358 3025915 . - . ID=gene-DOLE_RS12810;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=DOLE_RS12810;old_locus_tag=Dole_2496 NC_009943.1 Protein Homology CDS 3025358 3025915 . - 0 ID=cds-WP_012175912.1;Parent=gene-DOLE_RS12810;Dbxref=Genbank:WP_012175912.1;Name=WP_012175912.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725088.1;locus_tag=DOLE_RS12810;product=ATP-dependent protease subunit HslV;protein_id=WP_012175912.1;transl_table=11 NC_009943.1 RefSeq gene 3025896 3026822 . - . ID=gene-DOLE_RS12815;Name=DOLE_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12815;old_locus_tag=Dole_2497 NC_009943.1 Protein Homology CDS 3025896 3026822 . - 0 ID=cds-WP_012175913.1;Parent=gene-DOLE_RS12815;Dbxref=Genbank:WP_012175913.1;Name=WP_012175913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957928.1;locus_tag=DOLE_RS12815;product=tyrosine recombinase XerC;protein_id=WP_012175913.1;transl_table=11 NC_009943.1 RefSeq gene 3026854 3027243 . - . ID=gene-DOLE_RS12820;Name=DOLE_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12820;old_locus_tag=Dole_2498 NC_009943.1 Protein Homology CDS 3026854 3027243 . - 0 ID=cds-WP_012175914.1;Parent=gene-DOLE_RS12820;Dbxref=Genbank:WP_012175914.1;Name=WP_012175914.1;Ontology_term=GO:0006353;gbkey=CDS;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609550.1;locus_tag=DOLE_RS12820;product=Rho termination factor N-terminal domain-containing protein;protein_id=WP_012175914.1;transl_table=11 NC_009943.1 RefSeq gene 3027448 3028182 . - . ID=gene-DOLE_RS12825;Name=DOLE_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12825;old_locus_tag=Dole_2499 NC_009943.1 Protein Homology CDS 3027448 3028182 . - 0 ID=cds-WP_012175915.1;Parent=gene-DOLE_RS12825;Dbxref=Genbank:WP_012175915.1;Name=WP_012175915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610217.1;locus_tag=DOLE_RS12825;product=lysophospholipid acyltransferase family protein;protein_id=WP_012175915.1;transl_table=11 NC_009943.1 RefSeq gene 3028256 3029398 . - . ID=gene-DOLE_RS12830;Name=DOLE_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12830;old_locus_tag=Dole_2500 NC_009943.1 Protein Homology CDS 3028256 3029398 . - 0 ID=cds-WP_012175916.1;Parent=gene-DOLE_RS12830;Dbxref=Genbank:WP_012175916.1;Name=WP_012175916.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015902974.1;locus_tag=DOLE_RS12830;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012175916.1;transl_table=11 NC_009943.1 RefSeq gene 3030033 3031760 . + . ID=gene-DOLE_RS12840;Name=DOLE_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12840;old_locus_tag=Dole_2501 NC_009943.1 Protein Homology CDS 3030033 3031760 . + 0 ID=cds-WP_012175917.1;Parent=gene-DOLE_RS12840;Dbxref=Genbank:WP_012175917.1;Name=WP_012175917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587531.1;locus_tag=DOLE_RS12840;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_012175917.1;transl_table=11 NC_009943.1 RefSeq gene 3031950 3032243 . + . ID=gene-DOLE_RS12845;Name=DOLE_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12845;old_locus_tag=Dole_2502 NC_009943.1 Protein Homology CDS 3031950 3032243 . + 0 ID=cds-WP_041280561.1;Parent=gene-DOLE_RS12845;Dbxref=Genbank:WP_041280561.1;Name=WP_041280561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959681.1;locus_tag=DOLE_RS12845;product=MoaD/ThiS family protein;protein_id=WP_041280561.1;transl_table=11 NC_009943.1 RefSeq gene 3032233 3032472 . + . ID=gene-DOLE_RS12850;Name=DOLE_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12850;old_locus_tag=Dole_2503 NC_009943.1 Protein Homology CDS 3032233 3032472 . + 0 ID=cds-WP_012175919.1;Parent=gene-DOLE_RS12850;Dbxref=Genbank:WP_012175919.1;Name=WP_012175919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587533.1;locus_tag=DOLE_RS12850;product=MoaD/ThiS family protein;protein_id=WP_012175919.1;transl_table=11 NC_009943.1 RefSeq gene 3032472 3033329 . + . ID=gene-DOLE_RS12855;Name=DOLE_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12855;old_locus_tag=Dole_2504 NC_009943.1 Protein Homology CDS 3032472 3033329 . + 0 ID=cds-WP_012175920.1;Parent=gene-DOLE_RS12855;Dbxref=Genbank:WP_012175920.1;Name=WP_012175920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013094.2;locus_tag=DOLE_RS12855;product=HesA/MoeB/ThiF family protein;protein_id=WP_012175920.1;transl_table=11 NC_009943.1 RefSeq gene 3033723 3034718 . + . ID=gene-DOLE_RS12860;Name=DOLE_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12860;old_locus_tag=Dole_2505 NC_009943.1 GeneMarkS-2+ CDS 3033723 3034718 . + 0 ID=cds-WP_012175921.1;Parent=gene-DOLE_RS12860;Dbxref=Genbank:WP_012175921.1;Name=WP_012175921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12860;product=hypothetical protein;protein_id=WP_012175921.1;transl_table=11 NC_009943.1 RefSeq gene 3035321 3036562 . + . ID=gene-DOLE_RS12865;Name=DOLE_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12865;old_locus_tag=Dole_2506 NC_009943.1 Protein Homology CDS 3035321 3036562 . + 0 ID=cds-WP_012175922.1;Parent=gene-DOLE_RS12865;Dbxref=Genbank:WP_012175922.1;Name=WP_012175922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019334.2;locus_tag=DOLE_RS12865;product=serine/threonine-protein kinase;protein_id=WP_012175922.1;transl_table=11 NC_009943.1 RefSeq gene 3036845 3037465 . + . ID=gene-DOLE_RS12870;Name=DOLE_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12870 NC_009943.1 GeneMarkS-2+ CDS 3036845 3037465 . + 0 ID=cds-WP_041280562.1;Parent=gene-DOLE_RS12870;Dbxref=Genbank:WP_041280562.1;Name=WP_041280562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12870;product=hypothetical protein;protein_id=WP_041280562.1;transl_table=11 NC_009943.1 RefSeq gene 3037634 3038533 . + . ID=gene-DOLE_RS18245;Name=DOLE_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18245;old_locus_tag=Dole_2507 NC_009943.1 GeneMarkS-2+ CDS 3037634 3038533 . + 0 ID=cds-WP_153304425.1;Parent=gene-DOLE_RS18245;Dbxref=Genbank:WP_153304425.1;Name=WP_153304425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18245;product=hypothetical protein;protein_id=WP_153304425.1;transl_table=11 NC_009943.1 RefSeq gene 3038551 3039114 . + . ID=gene-DOLE_RS12875;Name=DOLE_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12875;old_locus_tag=Dole_2508 NC_009943.1 Protein Homology CDS 3038551 3039114 . + 0 ID=cds-WP_241392850.1;Parent=gene-DOLE_RS12875;Dbxref=Genbank:WP_241392850.1;Name=WP_241392850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_241392850.1;locus_tag=DOLE_RS12875;product=SelL-related redox protein;protein_id=WP_241392850.1;transl_except=(pos:3038674..3038676%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 3039213 3039896 . - . ID=gene-DOLE_RS12880;Name=DOLE_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12880;old_locus_tag=Dole_2509 NC_009943.1 Protein Homology CDS 3039213 3039896 . - 0 ID=cds-WP_012175925.1;Parent=gene-DOLE_RS12880;Dbxref=Genbank:WP_012175925.1;Name=WP_012175925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015146.2;locus_tag=DOLE_RS12880;product=uracil-DNA glycosylase;protein_id=WP_012175925.1;transl_table=11 NC_009943.1 RefSeq gene 3040080 3040853 . + . ID=gene-DOLE_RS12885;Name=DOLE_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12885;old_locus_tag=Dole_2510 NC_009943.1 Protein Homology CDS 3040080 3040853 . + 0 ID=cds-WP_012175926.1;Parent=gene-DOLE_RS12885;Dbxref=Genbank:WP_012175926.1;Name=WP_012175926.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013793.2;locus_tag=DOLE_RS12885;product=P-loop NTPase;protein_id=WP_012175926.1;transl_table=11 NC_009943.1 RefSeq gene 3040847 3042865 . + . ID=gene-DOLE_RS12890;Name=DOLE_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12890;old_locus_tag=Dole_2511 NC_009943.1 Protein Homology CDS 3040847 3042865 . + 0 ID=cds-WP_012175927.1;Parent=gene-DOLE_RS12890;Dbxref=Genbank:WP_012175927.1;Name=WP_012175927.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877988.1;locus_tag=DOLE_RS12890;product=RnfABCDGE type electron transport complex subunit B;protein_id=WP_012175927.1;transl_table=11 NC_009943.1 RefSeq gene 3042906 3043364 . + . ID=gene-DOLE_RS12895;Name=DOLE_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12895;old_locus_tag=Dole_2512 NC_009943.1 Protein Homology CDS 3042906 3043364 . + 0 ID=cds-WP_012175928.1;Parent=gene-DOLE_RS12895;Dbxref=Genbank:WP_012175928.1;Name=WP_012175928.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016160.2;locus_tag=DOLE_RS12895;product=SoxR reducing system RseC family protein;protein_id=WP_012175928.1;transl_table=11 NC_009943.1 RefSeq gene 3043377 3044453 . - . ID=gene-DOLE_RS12900;Name=DOLE_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12900;old_locus_tag=Dole_2513 NC_009943.1 Protein Homology CDS 3043377 3044453 . - 0 ID=cds-WP_012175929.1;Parent=gene-DOLE_RS12900;Dbxref=Genbank:WP_012175929.1;Name=WP_012175929.1;Ontology_term=GO:0008152,GO:0016853,GO:0051539,GO:1904047;gbkey=CDS;go_function=isomerase activity|0016853||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: protein motif:HMM:TIGR00238.1;locus_tag=DOLE_RS12900;product=KamA family radical SAM protein;protein_id=WP_012175929.1;transl_table=11 NC_009943.1 RefSeq gene 3044559 3045149 . + . ID=gene-DOLE_RS12905;Name=DOLE_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12905;old_locus_tag=Dole_2514 NC_009943.1 Protein Homology CDS 3044559 3045149 . + 0 ID=cds-WP_012175930.1;Parent=gene-DOLE_RS12905;Dbxref=Genbank:WP_012175930.1;Name=WP_012175930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904267.1;locus_tag=DOLE_RS12905;product=DNA-3-methyladenine glycosylase I;protein_id=WP_012175930.1;transl_table=11 NC_009943.1 RefSeq gene 3045146 3046423 . + . ID=gene-DOLE_RS12910;Name=DOLE_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12910;old_locus_tag=Dole_2515 NC_009943.1 Protein Homology CDS 3045146 3046423 . + 0 ID=cds-WP_012175931.1;Parent=gene-DOLE_RS12910;Dbxref=Genbank:WP_012175931.1;Name=WP_012175931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=DOLE_RS12910;product=glycosyltransferase family 4 protein;protein_id=WP_012175931.1;transl_table=11 NC_009943.1 RefSeq gene 3046440 3048158 . + . ID=gene-DOLE_RS12915;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=DOLE_RS12915;old_locus_tag=Dole_2516 NC_009943.1 Protein Homology CDS 3046440 3048158 . + 0 ID=cds-WP_012175932.1;Parent=gene-DOLE_RS12915;Dbxref=Genbank:WP_012175932.1;Name=WP_012175932.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0005737;gbkey=CDS;gene=recN;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR00634.1;locus_tag=DOLE_RS12915;product=DNA repair protein RecN;protein_id=WP_012175932.1;transl_table=11 NC_009943.1 RefSeq gene 3048489 3049271 . - . ID=gene-DOLE_RS12920;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=DOLE_RS12920;old_locus_tag=Dole_2517 NC_009943.1 Protein Homology CDS 3048489 3049271 . - 0 ID=cds-WP_012175933.1;Parent=gene-DOLE_RS12920;Dbxref=Genbank:WP_012175933.1;Name=WP_012175933.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876141.1;locus_tag=DOLE_RS12920;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_012175933.1;transl_table=11 NC_009943.1 RefSeq gene 3049349 3049942 . - . ID=gene-DOLE_RS12925;Name=DOLE_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12925;old_locus_tag=Dole_2518 NC_009943.1 Protein Homology CDS 3049349 3049942 . - 0 ID=cds-WP_012175934.1;Parent=gene-DOLE_RS12925;Dbxref=Genbank:WP_012175934.1;Name=WP_012175934.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021561.2;locus_tag=DOLE_RS12925;product=DUF2284 domain-containing protein;protein_id=WP_012175934.1;transl_table=11 NC_009943.1 RefSeq gene 3049939 3050349 . - . ID=gene-DOLE_RS12930;Name=DOLE_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12930;old_locus_tag=Dole_2519 NC_009943.1 GeneMarkS-2+ CDS 3049939 3050349 . - 0 ID=cds-WP_012175935.1;Parent=gene-DOLE_RS12930;Dbxref=Genbank:WP_012175935.1;Name=WP_012175935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12930;product=hypothetical protein;protein_id=WP_012175935.1;transl_table=11 NC_009943.1 RefSeq gene 3050504 3051202 . - . ID=gene-DOLE_RS12935;Name=DOLE_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12935;old_locus_tag=Dole_2520 NC_009943.1 Protein Homology CDS 3050504 3051202 . - 0 ID=cds-WP_012175936.1;Parent=gene-DOLE_RS12935;Dbxref=Genbank:WP_012175936.1;Name=WP_012175936.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015338.2;locus_tag=DOLE_RS12935;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_012175936.1;transl_table=11 NC_009943.1 RefSeq gene 3051216 3053360 . - . ID=gene-DOLE_RS12940;Name=DOLE_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12940;old_locus_tag=Dole_2521 NC_009943.1 Protein Homology CDS 3051216 3053360 . - 0 ID=cds-WP_012175937.1;Parent=gene-DOLE_RS12940;Dbxref=Genbank:WP_012175937.1;Name=WP_012175937.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024491.2;locus_tag=DOLE_RS12940;product=VTT domain-containing protein;protein_id=WP_012175937.1;transl_table=11 NC_009943.1 RefSeq gene 3053930 3054382 . + . ID=gene-DOLE_RS12945;Name=DOLE_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12945;old_locus_tag=Dole_2522 NC_009943.1 Protein Homology CDS 3053930 3054382 . + 0 ID=cds-WP_012175938.1;Parent=gene-DOLE_RS12945;Dbxref=Genbank:WP_012175938.1;Name=WP_012175938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012241.2;locus_tag=DOLE_RS12945;product=Hsp20/alpha crystallin family protein;protein_id=WP_012175938.1;transl_table=11 NC_009943.1 RefSeq gene 3054554 3055876 . + . ID=gene-DOLE_RS12950;Name=larA;gbkey=Gene;gene=larA;gene_biotype=protein_coding;locus_tag=DOLE_RS12950;old_locus_tag=Dole_2523 NC_009943.1 Protein Homology CDS 3054554 3055876 . + 0 ID=cds-WP_012175939.1;Parent=gene-DOLE_RS12950;Dbxref=Genbank:WP_012175939.1;Name=WP_012175939.1;Ontology_term=GO:0050043;gbkey=CDS;gene=larA;go_function=lactate racemase activity|0050043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905076.1;locus_tag=DOLE_RS12950;product=nickel-dependent lactate racemase;protein_id=WP_012175939.1;transl_table=11 NC_009943.1 RefSeq gene 3055916 3057514 . + . ID=gene-DOLE_RS12955;Name=DOLE_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12955;old_locus_tag=Dole_2524 NC_009943.1 Protein Homology CDS 3055916 3057514 . + 0 ID=cds-WP_012175940.1;Parent=gene-DOLE_RS12955;Dbxref=Genbank:WP_012175940.1;Name=WP_012175940.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025499.2;locus_tag=DOLE_RS12955;product=DUF4301 family protein;protein_id=WP_012175940.1;transl_table=11 NC_009943.1 RefSeq gene 3057514 3058410 . + . ID=gene-DOLE_RS12960;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=DOLE_RS12960;old_locus_tag=Dole_2525 NC_009943.1 Protein Homology CDS 3057514 3058410 . + 0 ID=cds-WP_012175941.1;Parent=gene-DOLE_RS12960;Dbxref=Genbank:WP_012175941.1;Name=WP_012175941.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904032.1;locus_tag=DOLE_RS12960;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_012175941.1;transl_table=11 NC_009943.1 RefSeq gene 3058737 3059549 . + . ID=gene-DOLE_RS12965;Name=DOLE_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12965;old_locus_tag=Dole_2526 NC_009943.1 Protein Homology CDS 3058737 3059549 . + 0 ID=cds-WP_041280564.1;Parent=gene-DOLE_RS12965;Dbxref=Genbank:WP_041280564.1;Name=WP_041280564.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012596.2;locus_tag=DOLE_RS12965;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_041280564.1;transl_table=11 NC_009943.1 RefSeq gene 3059725 3061179 . - . ID=gene-DOLE_RS12970;Name=DOLE_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12970;old_locus_tag=Dole_2527 NC_009943.1 GeneMarkS-2+ CDS 3059725 3061179 . - 0 ID=cds-WP_012175943.1;Parent=gene-DOLE_RS12970;Dbxref=Genbank:WP_012175943.1;Name=WP_012175943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12970;product=hypothetical protein;protein_id=WP_012175943.1;transl_table=11 NC_009943.1 RefSeq gene 3061251 3061865 . - . ID=gene-DOLE_RS12975;Name=DOLE_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12975;old_locus_tag=Dole_2528 NC_009943.1 Protein Homology CDS 3061251 3061865 . - 0 ID=cds-WP_012175944.1;Parent=gene-DOLE_RS12975;Dbxref=Genbank:WP_012175944.1;Name=WP_012175944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959407.1;locus_tag=DOLE_RS12975;product=transglutaminase family protein;protein_id=WP_012175944.1;transl_table=11 NC_009943.1 RefSeq gene 3062099 3062692 . + . ID=gene-DOLE_RS12980;Name=DOLE_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12980;old_locus_tag=Dole_2529 NC_009943.1 GeneMarkS-2+ CDS 3062099 3062692 . + 0 ID=cds-WP_012175945.1;Parent=gene-DOLE_RS12980;Dbxref=Genbank:WP_012175945.1;Name=WP_012175945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12980;product=hypothetical protein;protein_id=WP_012175945.1;transl_table=11 NC_009943.1 RefSeq gene 3062673 3063050 . + . ID=gene-DOLE_RS12985;Name=DOLE_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12985;old_locus_tag=Dole_2530 NC_009943.1 GeneMarkS-2+ CDS 3062673 3063050 . + 0 ID=cds-WP_012175946.1;Parent=gene-DOLE_RS12985;Dbxref=Genbank:WP_012175946.1;Name=WP_012175946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS12985;product=hypothetical protein;protein_id=WP_012175946.1;transl_table=11 NC_009943.1 RefSeq gene 3063132 3063569 . + . ID=gene-DOLE_RS12990;Name=DOLE_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12990;old_locus_tag=Dole_2531 NC_009943.1 Protein Homology CDS 3063132 3063569 . + 0 ID=cds-WP_012175947.1;Parent=gene-DOLE_RS12990;Dbxref=Genbank:WP_012175947.1;Name=WP_012175947.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=DOLE_RS12990;product=EamA family transporter;protein_id=WP_012175947.1;transl_table=11 NC_009943.1 RefSeq gene 3063635 3064585 . + . ID=gene-DOLE_RS12995;Name=DOLE_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS12995;old_locus_tag=Dole_2532 NC_009943.1 Protein Homology CDS 3063635 3064585 . + 0 ID=cds-WP_012175948.1;Parent=gene-DOLE_RS12995;Dbxref=Genbank:WP_012175948.1;Name=WP_012175948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013164783.1;locus_tag=DOLE_RS12995;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_012175948.1;transl_table=11 NC_009943.1 RefSeq gene 3065107 3066510 . + . ID=gene-DOLE_RS13000;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=DOLE_RS13000;old_locus_tag=Dole_2533 NC_009943.1 Protein Homology CDS 3065107 3066510 . + 0 ID=cds-WP_012175949.1;Parent=gene-DOLE_RS13000;Dbxref=Genbank:WP_012175949.1;Name=WP_012175949.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175949.1;locus_tag=DOLE_RS13000;product=glutamate--tRNA ligase;protein_id=WP_012175949.1;transl_table=11 NC_009943.1 RefSeq gene 3066548 3066621 . + . ID=gene-DOLE_RS13005;Name=DOLE_RS13005;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS13005;old_locus_tag=Dole_R0039 NC_009943.1 tRNAscan-SE tRNA 3066548 3066621 . + . ID=rna-DOLE_RS13005;Parent=gene-DOLE_RS13005;anticodon=(pos:3066580..3066582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13005;product=tRNA-Gln NC_009943.1 tRNAscan-SE exon 3066548 3066621 . + . ID=exon-DOLE_RS13005-1;Parent=rna-DOLE_RS13005;anticodon=(pos:3066580..3066582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13005;product=tRNA-Gln NC_009943.1 RefSeq gene 3066913 3069312 . - . ID=gene-DOLE_RS13010;Name=DOLE_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13010;old_locus_tag=Dole_2534 NC_009943.1 Protein Homology CDS 3066913 3069312 . - 0 ID=cds-WP_153304428.1;Parent=gene-DOLE_RS13010;Dbxref=Genbank:WP_153304428.1;Name=WP_153304428.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963807.1;locus_tag=DOLE_RS13010;product=PBP1A family penicillin-binding protein;protein_id=WP_153304428.1;transl_table=11 NC_009943.1 RefSeq gene 3069486 3070991 . - . ID=gene-DOLE_RS13015;Name=DOLE_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13015;old_locus_tag=Dole_2535 NC_009943.1 Protein Homology CDS 3069486 3070991 . - 0 ID=cds-WP_012175951.1;Parent=gene-DOLE_RS13015;Dbxref=Genbank:WP_012175951.1;Name=WP_012175951.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013584.2;locus_tag=DOLE_RS13015;product=amidase family protein;protein_id=WP_012175951.1;transl_table=11 NC_009943.1 RefSeq gene 3071258 3072598 . + . ID=gene-DOLE_RS13020;Name=DOLE_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13020;old_locus_tag=Dole_2536 NC_009943.1 Protein Homology CDS 3071258 3072598 . + 0 ID=cds-WP_012175952.1;Parent=gene-DOLE_RS13020;Dbxref=Genbank:WP_012175952.1;Name=WP_012175952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003761.0;locus_tag=DOLE_RS13020;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_012175952.1;transl_table=11 NC_009943.1 RefSeq gene 3072595 3073776 . + . ID=gene-DOLE_RS13025;Name=DOLE_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13025;old_locus_tag=Dole_2537 NC_009943.1 Protein Homology CDS 3072595 3073776 . + 0 ID=cds-WP_012175953.1;Parent=gene-DOLE_RS13025;Dbxref=Genbank:WP_012175953.1;Name=WP_012175953.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587318.1;locus_tag=DOLE_RS13025;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_012175953.1;transl_table=11 NC_009943.1 RefSeq gene 3073927 3074670 . + . ID=gene-DOLE_RS13030;Name=DOLE_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13030;old_locus_tag=Dole_2538 NC_009943.1 Protein Homology CDS 3073927 3074670 . + 0 ID=cds-WP_012175954.1;Parent=gene-DOLE_RS13030;Dbxref=Genbank:WP_012175954.1;Name=WP_012175954.1;Ontology_term=GO:0010181,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587317.1;locus_tag=DOLE_RS13030;product=FMN-binding protein;protein_id=WP_012175954.1;transl_table=11 NC_009943.1 RefSeq gene 3074700 3075317 . + . ID=gene-DOLE_RS13035;Name=DOLE_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13035;old_locus_tag=Dole_2539 NC_009943.1 Protein Homology CDS 3074700 3075317 . + 0 ID=cds-WP_012175955.1;Parent=gene-DOLE_RS13035;Dbxref=Genbank:WP_012175955.1;Name=WP_012175955.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070861.1;locus_tag=DOLE_RS13035;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_012175955.1;transl_table=11 NC_009943.1 RefSeq gene 3075319 3075927 . + . ID=gene-DOLE_RS13040;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=DOLE_RS13040;old_locus_tag=Dole_2540 NC_009943.1 Protein Homology CDS 3075319 3075927 . + 0 ID=cds-WP_012175956.1;Parent=gene-DOLE_RS13040;Dbxref=Genbank:WP_012175956.1;Name=WP_012175956.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663058.1;locus_tag=DOLE_RS13040;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_012175956.1;transl_table=11 NC_009943.1 RefSeq gene 3076021 3077241 . + . ID=gene-DOLE_RS13045;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=DOLE_RS13045;old_locus_tag=Dole_2541 NC_009943.1 Protein Homology CDS 3076021 3077241 . + 0 ID=cds-WP_012175957.1;Parent=gene-DOLE_RS13045;Dbxref=Genbank:WP_012175957.1;Name=WP_012175957.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968626.1;locus_tag=DOLE_RS13045;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_012175957.1;transl_table=11 NC_009943.1 RefSeq gene 3077521 3077961 . + . ID=gene-DOLE_RS13050;Name=DOLE_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13050;old_locus_tag=Dole_2542 NC_009943.1 Protein Homology CDS 3077521 3077961 . + 0 ID=cds-WP_012175958.1;Parent=gene-DOLE_RS13050;Dbxref=Genbank:WP_012175958.1;Name=WP_012175958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011188645.1;locus_tag=DOLE_RS13050;product=DUF1499 domain-containing protein;protein_id=WP_012175958.1;transl_table=11 NC_009943.1 RefSeq gene 3077958 3078830 . + . ID=gene-DOLE_RS13055;Name=DOLE_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13055;old_locus_tag=Dole_2543 NC_009943.1 Protein Homology CDS 3077958 3078830 . + 0 ID=cds-WP_012175959.1;Parent=gene-DOLE_RS13055;Dbxref=Genbank:WP_012175959.1;Name=WP_012175959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876845.1;locus_tag=DOLE_RS13055;product=YitT family protein;protein_id=WP_012175959.1;transl_table=11 NC_009943.1 RefSeq gene 3079075 3079695 . + . ID=gene-DOLE_RS17540;Name=DOLE_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17540;old_locus_tag=Dole_2544 NC_009943.1 Protein Homology CDS 3079075 3079695 . + 0 ID=cds-WP_012175960.1;Parent=gene-DOLE_RS17540;Dbxref=Genbank:WP_012175960.1;Name=WP_012175960.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS17540;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012175960.1;transl_table=11 NC_009943.1 RefSeq gene 3079775 3080899 . + . ID=gene-DOLE_RS13065;Name=DOLE_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13065;old_locus_tag=Dole_2545 NC_009943.1 Protein Homology CDS 3079775 3080899 . + 0 ID=cds-WP_041280565.1;Parent=gene-DOLE_RS13065;Dbxref=Genbank:WP_041280565.1;Name=WP_041280565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903321.1;locus_tag=DOLE_RS13065;product=HEAT repeat domain-containing protein;protein_id=WP_041280565.1;transl_table=11 NC_009943.1 RefSeq gene 3081108 3081770 . + . ID=gene-DOLE_RS13070;Name=DOLE_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13070;old_locus_tag=Dole_2546 NC_009943.1 Protein Homology CDS 3081108 3081770 . + 0 ID=cds-WP_012175962.1;Parent=gene-DOLE_RS13070;Dbxref=Genbank:WP_012175962.1;Name=WP_012175962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964807.1;locus_tag=DOLE_RS13070;product=cytochrome c3 family protein;protein_id=WP_012175962.1;transl_table=11 NC_009943.1 RefSeq gene 3081835 3083970 . + . ID=gene-DOLE_RS13075;Name=DOLE_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13075;old_locus_tag=Dole_2547 NC_009943.1 Protein Homology CDS 3081835 3083970 . + 0 ID=cds-WP_012175963.1;Parent=gene-DOLE_RS13075;Dbxref=Genbank:WP_012175963.1;Name=WP_012175963.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=DOLE_RS13075;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012175963.1;transl_table=11 NC_009943.1 RefSeq gene 3083990 3084808 . + . ID=gene-DOLE_RS13080;Name=DOLE_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13080;old_locus_tag=Dole_2548 NC_009943.1 Protein Homology CDS 3083990 3084808 . + 0 ID=cds-WP_012175964.1;Parent=gene-DOLE_RS13080;Dbxref=Genbank:WP_012175964.1;Name=WP_012175964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964809.1;locus_tag=DOLE_RS13080;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012175964.1;transl_table=11 NC_009943.1 RefSeq gene 3084875 3086107 . + . ID=gene-DOLE_RS13085;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=DOLE_RS13085;old_locus_tag=Dole_2549 NC_009943.1 Protein Homology CDS 3084875 3086107 . + 0 ID=cds-WP_012175965.1;Parent=gene-DOLE_RS13085;Dbxref=Genbank:WP_012175965.1;Name=WP_012175965.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875316.1;locus_tag=DOLE_RS13085;product=polysulfide reductase NrfD;protein_id=WP_012175965.1;transl_table=11 NC_009943.1 RefSeq gene 3086142 3086309 . + . ID=gene-DOLE_RS18460;Name=DOLE_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18460;old_locus_tag=Dole_2550 NC_009943.1 Protein Homology CDS 3086142 3086309 . + 0 ID=cds-WP_012175966.1;Parent=gene-DOLE_RS18460;Dbxref=Genbank:WP_012175966.1;Name=WP_012175966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074241.1;locus_tag=DOLE_RS18460;product=hypothetical protein;protein_id=WP_012175966.1;transl_table=11 NC_009943.1 RefSeq gene 3086565 3087818 . + . ID=gene-DOLE_RS13090;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=DOLE_RS13090;old_locus_tag=Dole_2551 NC_009943.1 Protein Homology CDS 3086565 3087818 . + 0 ID=cds-WP_012175967.1;Parent=gene-DOLE_RS13090;Dbxref=Genbank:WP_012175967.1;Name=WP_012175967.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175967.1;locus_tag=DOLE_RS13090;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_012175967.1;transl_table=11 NC_009943.1 RefSeq gene 3087898 3088593 . - . ID=gene-DOLE_RS13095;Name=DOLE_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13095;old_locus_tag=Dole_2552 NC_009943.1 Protein Homology CDS 3087898 3088593 . - 0 ID=cds-WP_012175968.1;Parent=gene-DOLE_RS13095;Dbxref=Genbank:WP_012175968.1;Name=WP_012175968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403599.1;locus_tag=DOLE_RS13095;product=TVP38/TMEM64 family protein;protein_id=WP_012175968.1;transl_table=11 NC_009943.1 RefSeq gene 3088806 3089000 . - . ID=gene-DOLE_RS18005;Name=DOLE_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18005 NC_009943.1 Protein Homology CDS 3088806 3089000 . - 0 ID=cds-WP_167320883.1;Parent=gene-DOLE_RS18005;Dbxref=Genbank:WP_167320883.1;Name=WP_167320883.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016777.2;locus_tag=DOLE_RS18005;product=amidohydrolase family protein;protein_id=WP_167320883.1;transl_table=11 NC_009943.1 RefSeq gene 3088987 3089796 . - . ID=gene-DOLE_RS13100;Name=DOLE_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13100;old_locus_tag=Dole_2553 NC_009943.1 Protein Homology CDS 3088987 3089796 . - 0 ID=cds-WP_012175969.1;Parent=gene-DOLE_RS13100;Dbxref=Genbank:WP_012175969.1;Name=WP_012175969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610767.1;locus_tag=DOLE_RS13100;product=DUF169 domain-containing protein;protein_id=WP_012175969.1;transl_table=11 NC_009943.1 RefSeq gene 3090023 3090880 . + . ID=gene-DOLE_RS13105;Name=DOLE_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13105;old_locus_tag=Dole_2554 NC_009943.1 Protein Homology CDS 3090023 3090880 . + 0 ID=cds-WP_012175970.1;Parent=gene-DOLE_RS13105;Dbxref=Genbank:WP_012175970.1;Name=WP_012175970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020227.2;locus_tag=DOLE_RS13105;product=SDR family oxidoreductase;protein_id=WP_012175970.1;transl_table=11 NC_009943.1 RefSeq gene 3090932 3091678 . + . ID=gene-DOLE_RS13110;Name=DOLE_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13110;old_locus_tag=Dole_2555 NC_009943.1 Protein Homology CDS 3090932 3091678 . + 0 ID=cds-WP_012175971.1;Parent=gene-DOLE_RS13110;Dbxref=Genbank:WP_012175971.1;Name=WP_012175971.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012596.2;locus_tag=DOLE_RS13110;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012175971.1;transl_table=11 NC_009943.1 RefSeq gene 3091694 3092665 . + . ID=gene-DOLE_RS13115;Name=DOLE_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13115;old_locus_tag=Dole_2556 NC_009943.1 Protein Homology CDS 3091694 3092665 . + 0 ID=cds-WP_012175972.1;Parent=gene-DOLE_RS13115;Dbxref=Genbank:WP_012175972.1;Name=WP_012175972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878248.1;locus_tag=DOLE_RS13115;product=MBL fold metallo-hydrolase;protein_id=WP_012175972.1;transl_table=11 NC_009943.1 RefSeq gene 3092957 3094624 . + . ID=gene-DOLE_RS13120;Name=DOLE_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13120;old_locus_tag=Dole_2557 NC_009943.1 Protein Homology CDS 3092957 3094624 . + 0 ID=cds-WP_012175973.1;Parent=gene-DOLE_RS13120;Dbxref=Genbank:WP_012175973.1;Name=WP_012175973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949835.1;locus_tag=DOLE_RS13120;product=long-chain-fatty-acid--CoA ligase;protein_id=WP_012175973.1;transl_table=11 NC_009943.1 RefSeq gene 3094636 3095424 . + . ID=gene-DOLE_RS13125;Name=DOLE_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13125;old_locus_tag=Dole_2558 NC_009943.1 Protein Homology CDS 3094636 3095424 . + 0 ID=cds-WP_012175974.1;Parent=gene-DOLE_RS13125;Dbxref=Genbank:WP_012175974.1;Name=WP_012175974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905889.1;locus_tag=DOLE_RS13125;product=exodeoxyribonuclease III;protein_id=WP_012175974.1;transl_table=11 NC_009943.1 RefSeq gene 3095386 3095544 . - . ID=gene-DOLE_RS18615;Name=DOLE_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18615 NC_009943.1 GeneMarkS-2+ CDS 3095386 3095544 . - 0 ID=cds-WP_232362751.1;Parent=gene-DOLE_RS18615;Dbxref=Genbank:WP_232362751.1;Name=WP_232362751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18615;product=hypothetical protein;protein_id=WP_232362751.1;transl_table=11 NC_009943.1 RefSeq pseudogene 3095644 3095724 . - . ID=gene-DOLE_RS18620;Name=DOLE_RS18620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DOLE_RS18620;partial=true;pseudo=true;start_range=.,3095644 NC_009943.1 Protein Homology CDS 3095644 3095724 . - 0 ID=cds-DOLE_RS18620;Parent=gene-DOLE_RS18620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=DOLE_RS18620;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3095644;transl_table=11 NC_009943.1 RefSeq pseudogene 3095925 3096248 . - . ID=gene-DOLE_RS18625;Name=rhuM;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=DOLE_RS18625;partial=true;pseudo=true;start_range=.,3095925 NC_009943.1 Protein Homology CDS 3095925 3096248 . - 0 ID=cds-DOLE_RS18625;Parent=gene-DOLE_RS18625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rhuM;inference=COORDINATES: protein motif:HMM:NF024706.2;locus_tag=DOLE_RS18625;partial=true;product=RhuM family protein;pseudo=true;start_range=.,3095925;transl_table=11 NC_009943.1 RefSeq gene 3096266 3096820 . - . ID=gene-DOLE_RS13135;Name=DOLE_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13135;old_locus_tag=Dole_2560 NC_009943.1 Protein Homology CDS 3096266 3096820 . - 0 ID=cds-WP_012175975.1;Parent=gene-DOLE_RS13135;Dbxref=Genbank:WP_012175975.1;Name=WP_012175975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174240.1;locus_tag=DOLE_RS13135;product=ORF6N domain-containing protein;protein_id=WP_012175975.1;transl_table=11 NC_009943.1 RefSeq gene 3097036 3097764 . - . ID=gene-DOLE_RS13140;Name=DOLE_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13140;old_locus_tag=Dole_2561 NC_009943.1 GeneMarkS-2+ CDS 3097036 3097764 . - 0 ID=cds-WP_153304429.1;Parent=gene-DOLE_RS13140;Dbxref=Genbank:WP_153304429.1;Name=WP_153304429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13140;product=DUF4136 domain-containing protein;protein_id=WP_153304429.1;transl_table=11 NC_009943.1 RefSeq gene 3098026 3098313 . - . ID=gene-DOLE_RS18630;Name=DOLE_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18630 NC_009943.1 GeneMarkS-2+ CDS 3098026 3098313 . - 0 ID=cds-WP_052294305.1;Parent=gene-DOLE_RS18630;Dbxref=Genbank:WP_052294305.1;Name=WP_052294305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18630;product=hypothetical protein;protein_id=WP_052294305.1;transl_table=11 NC_009943.1 RefSeq gene 3098493 3098699 . - . ID=gene-DOLE_RS18635;Name=DOLE_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18635;old_locus_tag=Dole_2562 NC_009943.1 Protein Homology CDS 3098493 3098699 . - 0 ID=cds-WP_012175977.1;Parent=gene-DOLE_RS18635;Dbxref=Genbank:WP_012175977.1;Name=WP_012175977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022018.2;locus_tag=DOLE_RS18635;product=ORF6N domain-containing protein;protein_id=WP_012175977.1;transl_table=11 NC_009943.1 RefSeq gene 3098991 3099905 . - . ID=gene-DOLE_RS13150;Name=DOLE_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13150;old_locus_tag=Dole_2563 NC_009943.1 Protein Homology CDS 3098991 3099905 . - 0 ID=cds-WP_012175978.1;Parent=gene-DOLE_RS13150;Dbxref=Genbank:WP_012175978.1;Name=WP_012175978.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022633.2;locus_tag=DOLE_RS13150;product=DUF2971 domain-containing protein;protein_id=WP_012175978.1;transl_table=11 NC_009943.1 RefSeq gene 3100242 3100592 . - . ID=gene-DOLE_RS18015;Name=DOLE_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18015;old_locus_tag=Dole_2564 NC_009943.1 Protein Homology CDS 3100242 3100592 . - 0 ID=cds-WP_012175979.1;Parent=gene-DOLE_RS18015;Dbxref=Genbank:WP_012175979.1;Name=WP_012175979.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071838.1;locus_tag=DOLE_RS18015;product=HigA family addiction module antitoxin;protein_id=WP_012175979.1;transl_table=11 NC_009943.1 RefSeq gene 3100688 3101359 . - . ID=gene-DOLE_RS13160;Name=DOLE_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13160;old_locus_tag=Dole_2565 NC_009943.1 GeneMarkS-2+ CDS 3100688 3101359 . - 0 ID=cds-WP_041280567.1;Parent=gene-DOLE_RS13160;Dbxref=Genbank:WP_041280567.1;Name=WP_041280567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13160;product=hypothetical protein;protein_id=WP_041280567.1;transl_table=11 NC_009943.1 RefSeq gene 3101714 3102994 . - . ID=gene-DOLE_RS13165;Name=DOLE_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13165;old_locus_tag=Dole_2566 NC_009943.1 Protein Homology CDS 3101714 3102994 . - 0 ID=cds-WP_012175981.1;Parent=gene-DOLE_RS13165;Dbxref=Genbank:WP_012175981.1;Name=WP_012175981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS13165;product=B12-binding domain-containing radical SAM protein;protein_id=WP_012175981.1;transl_table=11 NC_009943.1 RefSeq gene 3103195 3103644 . - . ID=gene-DOLE_RS13170;Name=DOLE_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13170;old_locus_tag=Dole_2567 NC_009943.1 GeneMarkS-2+ CDS 3103195 3103644 . - 0 ID=cds-WP_012175982.1;Parent=gene-DOLE_RS13170;Dbxref=Genbank:WP_012175982.1;Name=WP_012175982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13170;product=hypothetical protein;protein_id=WP_012175982.1;transl_table=11 NC_009943.1 RefSeq gene 3103755 3104504 . - . ID=gene-DOLE_RS13175;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=DOLE_RS13175;old_locus_tag=Dole_2568 NC_009943.1 Protein Homology CDS 3103755 3104504 . - 0 ID=cds-WP_012175983.1;Parent=gene-DOLE_RS13175;Dbxref=Genbank:WP_012175983.1;Name=WP_012175983.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175983.1;locus_tag=DOLE_RS13175;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_012175983.1;transl_table=11 NC_009943.1 RefSeq gene 3104519 3105208 . - . ID=gene-DOLE_RS13180;Name=DOLE_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13180;old_locus_tag=Dole_2569 NC_009943.1 Protein Homology CDS 3104519 3105208 . - 0 ID=cds-WP_012175984.1;Parent=gene-DOLE_RS13180;Dbxref=Genbank:WP_012175984.1;Name=WP_012175984.1;Ontology_term=GO:0009265,GO:0051353,GO:0051539;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA,positive regulation of oxidoreductase activity|0051353||IEA;inference=COORDINATES: protein motif:HMM:TIGR02495.1;locus_tag=DOLE_RS13180;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_012175984.1;transl_table=11 NC_009943.1 RefSeq gene 3105424 3107616 . - . ID=gene-DOLE_RS13185;Name=DOLE_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13185;old_locus_tag=Dole_2570 NC_009943.1 Protein Homology CDS 3105424 3107616 . - 0 ID=cds-WP_012175985.1;Parent=gene-DOLE_RS13185;Dbxref=Genbank:WP_012175985.1;Name=WP_012175985.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071004.1;locus_tag=DOLE_RS13185;product=ribonucleoside triphosphate reductase;protein_id=WP_012175985.1;transl_table=11 NC_009943.1 RefSeq gene 3107979 3109412 . - . ID=gene-DOLE_RS13190;Name=DOLE_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13190;old_locus_tag=Dole_2571 NC_009943.1 Protein Homology CDS 3107979 3109412 . - 0 ID=cds-WP_012175986.1;Parent=gene-DOLE_RS13190;Dbxref=Genbank:WP_012175986.1;Name=WP_012175986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948670.1;locus_tag=DOLE_RS13190;product=RtcB family protein;protein_id=WP_012175986.1;transl_table=11 NC_009943.1 RefSeq gene 3109550 3109726 . - . ID=gene-DOLE_RS18255;Name=DOLE_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18255 NC_009943.1 GeneMarkS-2+ CDS 3109550 3109726 . - 0 ID=cds-WP_153304430.1;Parent=gene-DOLE_RS18255;Dbxref=Genbank:WP_153304430.1;Name=WP_153304430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18255;product=hypothetical protein;protein_id=WP_153304430.1;transl_table=11 NC_009943.1 RefSeq gene 3109965 3112643 . - . ID=gene-DOLE_RS13200;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=DOLE_RS13200;old_locus_tag=Dole_2573 NC_009943.1 Protein Homology CDS 3109965 3112643 . - 0 ID=cds-WP_012175988.1;Parent=gene-DOLE_RS13200;Dbxref=Genbank:WP_012175988.1;Name=WP_012175988.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903138.1;locus_tag=DOLE_RS13200;product=DNA polymerase I;protein_id=WP_012175988.1;transl_table=11 NC_009943.1 RefSeq gene 3112831 3114876 . + . ID=gene-DOLE_RS17555;Name=DOLE_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17555;old_locus_tag=Dole_2574 NC_009943.1 Protein Homology CDS 3112831 3114876 . + 0 ID=cds-WP_153304431.1;Parent=gene-DOLE_RS17555;Dbxref=Genbank:WP_153304431.1;Name=WP_153304431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=DOLE_RS17555;product=methyl-accepting chemotaxis protein;protein_id=WP_153304431.1;transl_table=11 NC_009943.1 RefSeq gene 3114889 3115323 . + . ID=gene-DOLE_RS13210;Name=DOLE_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13210 NC_009943.1 GeneMarkS-2+ CDS 3114889 3115323 . + 0 ID=cds-WP_041280568.1;Parent=gene-DOLE_RS13210;Dbxref=Genbank:WP_041280568.1;Name=WP_041280568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13210;product=hypothetical protein;protein_id=WP_041280568.1;transl_table=11 NC_009943.1 RefSeq gene 3115379 3117622 . - . ID=gene-DOLE_RS17560;Name=DOLE_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17560;old_locus_tag=Dole_2575 NC_009943.1 Protein Homology CDS 3115379 3117622 . - 0 ID=cds-WP_083766617.1;Parent=gene-DOLE_RS17560;Dbxref=Genbank:WP_083766617.1;Name=WP_083766617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012437.2;locus_tag=DOLE_RS17560;product=hypothetical protein;protein_id=WP_083766617.1;transl_table=11 NC_009943.1 RefSeq gene 3117607 3118395 . - . ID=gene-DOLE_RS13220;Name=DOLE_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13220;old_locus_tag=Dole_2576 NC_009943.1 Protein Homology CDS 3117607 3118395 . - 0 ID=cds-WP_012175991.1;Parent=gene-DOLE_RS13220;Dbxref=Genbank:WP_012175991.1;Name=WP_012175991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877808.1;locus_tag=DOLE_RS13220;product=dihydropteroate synthase;protein_id=WP_012175991.1;transl_table=11 NC_009943.1 RefSeq gene 3118392 3119135 . - . ID=gene-DOLE_RS13225;Name=DOLE_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13225;old_locus_tag=Dole_2577 NC_009943.1 Protein Homology CDS 3118392 3119135 . - 0 ID=cds-WP_012175992.1;Parent=gene-DOLE_RS13225;Dbxref=Genbank:WP_012175992.1;Name=WP_012175992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878408.1;locus_tag=DOLE_RS13225;product=acetylpolyamine aminohydrolase;protein_id=WP_012175992.1;transl_table=11 NC_009943.1 RefSeq gene 3119316 3119816 . + . ID=gene-DOLE_RS13230;Name=DOLE_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13230;old_locus_tag=Dole_2578 NC_009943.1 GeneMarkS-2+ CDS 3119316 3119816 . + 0 ID=cds-WP_012175993.1;Parent=gene-DOLE_RS13230;Dbxref=Genbank:WP_012175993.1;Name=WP_012175993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13230;product=hypothetical protein;protein_id=WP_012175993.1;transl_table=11 NC_009943.1 RefSeq gene 3119829 3120506 . + . ID=gene-DOLE_RS13235;Name=DOLE_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13235;old_locus_tag=Dole_2579 NC_009943.1 Protein Homology CDS 3119829 3120506 . + 0 ID=cds-WP_232362710.1;Parent=gene-DOLE_RS13235;Dbxref=Genbank:WP_232362710.1;Name=WP_232362710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018696.2;locus_tag=DOLE_RS13235;product=class I SAM-dependent methyltransferase;protein_id=WP_232362710.1;transl_table=11 NC_009943.1 RefSeq gene 3120517 3122199 . - . ID=gene-DOLE_RS13240;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=DOLE_RS13240;old_locus_tag=Dole_2580 NC_009943.1 Protein Homology CDS 3120517 3122199 . - 0 ID=cds-WP_012175995.1;Parent=gene-DOLE_RS13240;Dbxref=Genbank:WP_012175995.1;Name=WP_012175995.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073422.1;locus_tag=DOLE_RS13240;product=energy-dependent translational throttle protein EttA;protein_id=WP_012175995.1;transl_table=11 NC_009943.1 RefSeq gene 3122463 3123236 . + . ID=gene-DOLE_RS13245;Name=DOLE_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13245;old_locus_tag=Dole_2581 NC_009943.1 Protein Homology CDS 3122463 3123236 . + 0 ID=cds-WP_012175996.1;Parent=gene-DOLE_RS13245;Dbxref=Genbank:WP_012175996.1;Name=WP_012175996.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013972.2;locus_tag=DOLE_RS13245;product=START domain-containing protein;protein_id=WP_012175996.1;transl_table=11 NC_009943.1 RefSeq gene 3123247 3124083 . - . ID=gene-DOLE_RS13250;Name=DOLE_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13250;old_locus_tag=Dole_2582 NC_009943.1 Protein Homology CDS 3123247 3124083 . - 0 ID=cds-WP_012175997.1;Parent=gene-DOLE_RS13250;Dbxref=Genbank:WP_012175997.1;Name=WP_012175997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175997.1;locus_tag=DOLE_RS13250;product=NAD(+)/NADH kinase;protein_id=WP_012175997.1;transl_table=11 NC_009943.1 RefSeq gene 3124273 3125391 . - . ID=gene-DOLE_RS13255;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=DOLE_RS13255;old_locus_tag=Dole_2583 NC_009943.1 Protein Homology CDS 3124273 3125391 . - 0 ID=cds-WP_012175998.1;Parent=gene-DOLE_RS13255;Dbxref=Genbank:WP_012175998.1;Name=WP_012175998.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: protein motif:HMM:NF008865.0;locus_tag=DOLE_RS13255;product=prephenate dehydratase;protein_id=WP_012175998.1;transl_table=11 NC_009943.1 RefSeq gene 3125462 3125794 . + . ID=gene-DOLE_RS13260;Name=DOLE_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13260;old_locus_tag=Dole_2584 NC_009943.1 Protein Homology CDS 3125462 3125794 . + 0 ID=cds-WP_012175999.1;Parent=gene-DOLE_RS13260;Dbxref=Genbank:WP_012175999.1;Name=WP_012175999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949102.1;locus_tag=DOLE_RS13260;product=hypothetical protein;protein_id=WP_012175999.1;transl_table=11 NC_009943.1 RefSeq gene 3125908 3127557 . + . ID=gene-DOLE_RS13265;Name=DOLE_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13265;old_locus_tag=Dole_2585 NC_009943.1 Protein Homology CDS 3125908 3127557 . + 0 ID=cds-WP_012176000.1;Parent=gene-DOLE_RS13265;Dbxref=Genbank:WP_012176000.1;Name=WP_012176000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588367.1;locus_tag=DOLE_RS13265;product=ribonuclease J;protein_id=WP_012176000.1;transl_table=11 NC_009943.1 RefSeq gene 3127628 3129778 . + . ID=gene-DOLE_RS13270;Name=DOLE_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13270;old_locus_tag=Dole_2586 NC_009943.1 Protein Homology CDS 3127628 3129778 . + 0 ID=cds-WP_012176001.1;Parent=gene-DOLE_RS13270;Dbxref=Genbank:WP_012176001.1;Name=WP_012176001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723489.1;locus_tag=DOLE_RS13270;product=DNA translocase FtsK;protein_id=WP_012176001.1;transl_table=11 NC_009943.1 RefSeq gene 3129775 3130389 . + . ID=gene-DOLE_RS13275;Name=DOLE_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13275;old_locus_tag=Dole_2587 NC_009943.1 Protein Homology CDS 3129775 3130389 . + 0 ID=cds-WP_012176002.1;Parent=gene-DOLE_RS13275;Dbxref=Genbank:WP_012176002.1;Name=WP_012176002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903590.1;locus_tag=DOLE_RS13275;product=class I SAM-dependent methyltransferase;protein_id=WP_012176002.1;transl_table=11 NC_009943.1 RefSeq gene 3130779 3131861 . + . ID=gene-DOLE_RS13280;Name=DOLE_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13280;old_locus_tag=Dole_2588 NC_009943.1 GeneMarkS-2+ CDS 3130779 3131861 . + 0 ID=cds-WP_153304432.1;Parent=gene-DOLE_RS13280;Dbxref=Genbank:WP_153304432.1;Name=WP_153304432.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13280;product=hypothetical protein;protein_id=WP_153304432.1;transl_table=11 NC_009943.1 RefSeq gene 3131862 3132665 . - . ID=gene-DOLE_RS17565;Name=DOLE_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17565;old_locus_tag=Dole_2589 NC_009943.1 GeneMarkS-2+ CDS 3131862 3132665 . - 0 ID=cds-WP_012176004.1;Parent=gene-DOLE_RS17565;Dbxref=Genbank:WP_012176004.1;Name=WP_012176004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17565;product=epoxyqueuosine reductase;protein_id=WP_012176004.1;transl_table=11 NC_009943.1 RefSeq gene 3132775 3133503 . - . ID=gene-DOLE_RS13290;Name=DOLE_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13290;old_locus_tag=Dole_2590 NC_009943.1 Protein Homology CDS 3132775 3133503 . - 0 ID=cds-WP_041280569.1;Parent=gene-DOLE_RS13290;Dbxref=Genbank:WP_041280569.1;Name=WP_041280569.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:NF013782.2;locus_tag=DOLE_RS13290;product=thioesterase;protein_id=WP_041280569.1;transl_table=11 NC_009943.1 RefSeq gene 3133773 3134090 . - . ID=gene-DOLE_RS13295;Name=DOLE_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13295;old_locus_tag=Dole_2591 NC_009943.1 GeneMarkS-2+ CDS 3133773 3134090 . - 0 ID=cds-WP_012176006.1;Parent=gene-DOLE_RS13295;Dbxref=Genbank:WP_012176006.1;Name=WP_012176006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13295;product=hypothetical protein;protein_id=WP_012176006.1;transl_table=11 NC_009943.1 RefSeq gene 3134080 3135534 . - . ID=gene-DOLE_RS13300;Name=DOLE_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13300;old_locus_tag=Dole_2592 NC_009943.1 Protein Homology CDS 3134080 3135534 . - 0 ID=cds-WP_012176007.1;Parent=gene-DOLE_RS13300;Dbxref=Genbank:WP_012176007.1;Name=WP_012176007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610354.1;locus_tag=DOLE_RS13300;product=4-hydroxyphenylacetate 3-hydroxylase family protein;protein_id=WP_012176007.1;transl_table=11 NC_009943.1 RefSeq gene 3135765 3136481 . - . ID=gene-DOLE_RS13305;Name=DOLE_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13305;old_locus_tag=Dole_2593 NC_009943.1 Protein Homology CDS 3135765 3136481 . - 0 ID=cds-WP_012176008.1;Parent=gene-DOLE_RS13305;Dbxref=Genbank:WP_012176008.1;Name=WP_012176008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965804.1;locus_tag=DOLE_RS13305;product=class I SAM-dependent methyltransferase;protein_id=WP_012176008.1;transl_table=11 NC_009943.1 RefSeq gene 3136453 3137718 . - . ID=gene-DOLE_RS13310;Name=DOLE_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13310;old_locus_tag=Dole_2594 NC_009943.1 Protein Homology CDS 3136453 3137718 . - 0 ID=cds-WP_012176009.1;Parent=gene-DOLE_RS13310;Dbxref=Genbank:WP_012176009.1;Name=WP_012176009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074473.1;locus_tag=DOLE_RS13310;product=glycosyltransferase family 4 protein;protein_id=WP_012176009.1;transl_table=11 NC_009943.1 RefSeq gene 3137973 3138176 . + . ID=gene-DOLE_RS13315;Name=DOLE_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13315;old_locus_tag=Dole_2595 NC_009943.1 Protein Homology CDS 3137973 3138176 . + 0 ID=cds-WP_012176010.1;Parent=gene-DOLE_RS13315;Dbxref=Genbank:WP_012176010.1;Name=WP_012176010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588137.1;locus_tag=DOLE_RS13315;product=DUF6485 family protein;protein_id=WP_012176010.1;transl_table=11 NC_009943.1 RefSeq gene 3138267 3139631 . - . ID=gene-DOLE_RS13320;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=DOLE_RS13320;old_locus_tag=Dole_2596 NC_009943.1 Protein Homology CDS 3138267 3139631 . - 0 ID=cds-WP_041280570.1;Parent=gene-DOLE_RS13320;Dbxref=Genbank:WP_041280570.1;Name=WP_041280570.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: protein motif:HMM:NF008112.0;locus_tag=DOLE_RS13320;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_041280570.1;transl_table=11 NC_009943.1 RefSeq gene 3139643 3140455 . - . ID=gene-DOLE_RS13325;Name=cbiR;gbkey=Gene;gene=cbiR;gene_biotype=protein_coding;locus_tag=DOLE_RS13325;old_locus_tag=Dole_2597 NC_009943.1 Protein Homology CDS 3139643 3140455 . - 0 ID=cds-WP_012176012.1;Parent=gene-DOLE_RS13325;Dbxref=Genbank:WP_012176012.1;Name=WP_012176012.1;gbkey=CDS;gene=cbiR;inference=COORDINATES: protein motif:HMM:NF041277.1;locus_tag=DOLE_RS13325;product=cobamide remodeling phosphodiesterase CbiR;protein_id=WP_012176012.1;transl_table=11 NC_009943.1 RefSeq gene 3140607 3141392 . + . ID=gene-DOLE_RS13330;Name=DOLE_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13330;old_locus_tag=Dole_2598 NC_009943.1 Protein Homology CDS 3140607 3141392 . + 0 ID=cds-WP_012176013.1;Parent=gene-DOLE_RS13330;Dbxref=Genbank:WP_012176013.1;Name=WP_012176013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013793.2;locus_tag=DOLE_RS13330;product=ParA family protein;protein_id=WP_012176013.1;transl_table=11 NC_009943.1 RefSeq gene 3141364 3141660 . + . ID=gene-DOLE_RS13335;Name=DOLE_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13335;old_locus_tag=Dole_2599 NC_009943.1 GeneMarkS-2+ CDS 3141364 3141660 . + 0 ID=cds-WP_012176014.1;Parent=gene-DOLE_RS13335;Dbxref=Genbank:WP_012176014.1;Name=WP_012176014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13335;product=hypothetical protein;protein_id=WP_012176014.1;transl_table=11 NC_009943.1 RefSeq gene 3141755 3142792 . + . ID=gene-DOLE_RS13340;Name=DOLE_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13340;old_locus_tag=Dole_2600 NC_009943.1 Protein Homology CDS 3141755 3142792 . + 0 ID=cds-WP_012176015.1;Parent=gene-DOLE_RS13340;Dbxref=Genbank:WP_012176015.1;Name=WP_012176015.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=DOLE_RS13340;product=MBL fold metallo-hydrolase;protein_id=WP_012176015.1;transl_table=11 NC_009943.1 RefSeq gene 3142953 3144377 . - . ID=gene-DOLE_RS13345;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=DOLE_RS13345;old_locus_tag=Dole_2601 NC_009943.1 Protein Homology CDS 3142953 3144377 . - 0 ID=cds-WP_012176016.1;Parent=gene-DOLE_RS13345;Dbxref=Genbank:WP_012176016.1;Name=WP_012176016.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877719.1;locus_tag=DOLE_RS13345;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_012176016.1;transl_table=11 NC_009943.1 RefSeq gene 3144854 3145897 . + . ID=gene-DOLE_RS13350;Name=DOLE_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13350;old_locus_tag=Dole_2602 NC_009943.1 GeneMarkS-2+ CDS 3144854 3145897 . + 0 ID=cds-WP_153304433.1;Parent=gene-DOLE_RS13350;Dbxref=Genbank:WP_153304433.1;Name=WP_153304433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13350;product=hypothetical protein;protein_id=WP_153304433.1;transl_table=11 NC_009943.1 RefSeq gene 3146491 3147264 . + . ID=gene-DOLE_RS13355;Name=DOLE_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13355;old_locus_tag=Dole_2603 NC_009943.1 Protein Homology CDS 3146491 3147264 . + 0 ID=cds-WP_012176018.1;Parent=gene-DOLE_RS13355;Dbxref=Genbank:WP_012176018.1;Name=WP_012176018.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025695.2;locus_tag=DOLE_RS13355;product=Abi-alpha family protein;protein_id=WP_012176018.1;transl_table=11 NC_009943.1 RefSeq gene 3147398 3147925 . + . ID=gene-DOLE_RS13360;Name=DOLE_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13360 NC_009943.1 GeneMarkS-2+ CDS 3147398 3147925 . + 0 ID=cds-WP_153304434.1;Parent=gene-DOLE_RS13360;Dbxref=Genbank:WP_153304434.1;Name=WP_153304434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13360;product=hypothetical protein;protein_id=WP_153304434.1;transl_table=11 NC_009943.1 RefSeq gene 3148007 3148312 . + . ID=gene-DOLE_RS13365;Name=DOLE_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13365 NC_009943.1 GeneMarkS-2+ CDS 3148007 3148312 . + 0 ID=cds-WP_041280573.1;Parent=gene-DOLE_RS13365;Dbxref=Genbank:WP_041280573.1;Name=WP_041280573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13365;product=hypothetical protein;protein_id=WP_041280573.1;transl_table=11 NC_009943.1 RefSeq gene 3149283 3149537 . + . ID=gene-DOLE_RS13375;Name=DOLE_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13375 NC_009943.1 GeneMarkS-2+ CDS 3149283 3149537 . + 0 ID=cds-WP_041280574.1;Parent=gene-DOLE_RS13375;Dbxref=Genbank:WP_041280574.1;Name=WP_041280574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13375;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_041280574.1;transl_table=11 NC_009943.1 RefSeq gene 3149531 3149860 . + . ID=gene-DOLE_RS13380;Name=DOLE_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13380;old_locus_tag=Dole_2605 NC_009943.1 Protein Homology CDS 3149531 3149860 . + 0 ID=cds-WP_012176020.1;Parent=gene-DOLE_RS13380;Dbxref=Genbank:WP_012176020.1;Name=WP_012176020.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014505.2;locus_tag=DOLE_RS13380;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_012176020.1;transl_table=11 NC_009943.1 RefSeq gene 3150001 3150243 . + . ID=gene-DOLE_RS13385;Name=DOLE_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13385;old_locus_tag=Dole_2606 NC_009943.1 Protein Homology CDS 3150001 3150243 . + 0 ID=cds-WP_012176021.1;Parent=gene-DOLE_RS13385;Dbxref=Genbank:WP_012176021.1;Name=WP_012176021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875559.1;locus_tag=DOLE_RS13385;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_012176021.1;transl_table=11 NC_009943.1 RefSeq gene 3150243 3150503 . + . ID=gene-DOLE_RS13390;Name=DOLE_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13390;old_locus_tag=Dole_2607 NC_009943.1 Protein Homology CDS 3150243 3150503 . + 0 ID=cds-WP_012176022.1;Parent=gene-DOLE_RS13390;Dbxref=Genbank:WP_012176022.1;Name=WP_012176022.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875560.1;locus_tag=DOLE_RS13390;product=Txe/YoeB family addiction module toxin;protein_id=WP_012176022.1;transl_table=11 NC_009943.1 RefSeq gene 3150666 3151655 . + . ID=gene-DOLE_RS13395;Name=DOLE_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13395;old_locus_tag=Dole_2608 NC_009943.1 Protein Homology CDS 3150666 3151655 . + 0 ID=cds-WP_012176023.1;Parent=gene-DOLE_RS13395;Dbxref=Genbank:WP_012176023.1;Name=WP_012176023.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF027681.2;locus_tag=DOLE_RS13395;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012176023.1;transl_table=11 NC_009943.1 RefSeq gene 3151631 3152140 . + . ID=gene-DOLE_RS13400;Name=DOLE_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13400;old_locus_tag=Dole_2609 NC_009943.1 Protein Homology CDS 3151631 3152140 . + 0 ID=cds-WP_208596980.1;Parent=gene-DOLE_RS13400;Dbxref=Genbank:WP_208596980.1;Name=WP_208596980.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022072.2;locus_tag=DOLE_RS13400;product=SRPBCC domain-containing protein;protein_id=WP_208596980.1;transl_table=11 NC_009943.1 RefSeq gene 3152159 3153100 . + . ID=gene-DOLE_RS13405;Name=DOLE_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13405;old_locus_tag=Dole_2610 NC_009943.1 GeneMarkS-2+ CDS 3152159 3153100 . + 0 ID=cds-WP_208596981.1;Parent=gene-DOLE_RS13405;Dbxref=Genbank:WP_208596981.1;Name=WP_208596981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13405;product=hypothetical protein;protein_id=WP_208596981.1;transl_table=11 NC_009943.1 RefSeq gene 3153181 3153525 . + . ID=gene-DOLE_RS13410;Name=DOLE_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13410;old_locus_tag=Dole_2611 NC_009943.1 Protein Homology CDS 3153181 3153525 . + 0 ID=cds-WP_012176026.1;Parent=gene-DOLE_RS13410;Dbxref=Genbank:WP_012176026.1;Name=WP_012176026.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016050.2;locus_tag=DOLE_RS13410;product=cyclophilin-like fold protein;protein_id=WP_012176026.1;transl_table=11 NC_009943.1 RefSeq gene 3153670 3153861 . + . ID=gene-DOLE_RS13415;Name=DOLE_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13415;old_locus_tag=Dole_2612 NC_009943.1 Protein Homology CDS 3153670 3153861 . + 0 ID=cds-WP_012176027.1;Parent=gene-DOLE_RS13415;Dbxref=Genbank:WP_012176027.1;Name=WP_012176027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948578.1;locus_tag=DOLE_RS13415;product=ferredoxin;protein_id=WP_012176027.1;transl_table=11 NC_009943.1 RefSeq gene 3153945 3154520 . + . ID=gene-DOLE_RS13420;Name=DOLE_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13420;old_locus_tag=Dole_2613 NC_009943.1 Protein Homology CDS 3153945 3154520 . + 0 ID=cds-WP_012176028.1;Parent=gene-DOLE_RS13420;Dbxref=Genbank:WP_012176028.1;Name=WP_012176028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176061.1;locus_tag=DOLE_RS13420;product=rubrerythrin family protein;protein_id=WP_012176028.1;transl_table=11 NC_009943.1 RefSeq gene 3154695 3156389 . - . ID=gene-DOLE_RS13425;Name=DOLE_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13425;old_locus_tag=Dole_2614 NC_009943.1 Protein Homology CDS 3154695 3156389 . - 0 ID=cds-WP_012176029.1;Parent=gene-DOLE_RS13425;Dbxref=Genbank:WP_012176029.1;Name=WP_012176029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014910.2;locus_tag=DOLE_RS13425;product=FAD-binding oxidoreductase;protein_id=WP_012176029.1;transl_table=11 NC_009943.1 RefSeq gene 3156522 3158084 . - . ID=gene-DOLE_RS13430;Name=DOLE_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13430;old_locus_tag=Dole_2615 NC_009943.1 Protein Homology CDS 3156522 3158084 . - 0 ID=cds-WP_012176030.1;Parent=gene-DOLE_RS13430;Dbxref=Genbank:WP_012176030.1;Name=WP_012176030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012589.2;locus_tag=DOLE_RS13430;product=FGGY-family carbohydrate kinase;protein_id=WP_012176030.1;transl_table=11 NC_009943.1 RefSeq gene 3158413 3160011 . - . ID=gene-DOLE_RS13435;Name=DOLE_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13435;old_locus_tag=Dole_2616 NC_009943.1 Protein Homology CDS 3158413 3160011 . - 0 ID=cds-WP_167320884.1;Parent=gene-DOLE_RS13435;Dbxref=Genbank:WP_167320884.1;Name=WP_167320884.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013434.2;locus_tag=DOLE_RS13435;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_167320884.1;transl_table=11 NC_009943.1 RefSeq gene 3159996 3160688 . - . ID=gene-DOLE_RS13440;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=DOLE_RS13440;old_locus_tag=Dole_2617 NC_009943.1 Protein Homology CDS 3159996 3160688 . - 0 ID=cds-WP_012176032.1;Parent=gene-DOLE_RS13440;Dbxref=Genbank:WP_012176032.1;Name=WP_012176032.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947929.1;locus_tag=DOLE_RS13440;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_012176032.1;transl_table=11 NC_009943.1 RefSeq gene 3160960 3161709 . + . ID=gene-DOLE_RS13445;Name=mtnP;gbkey=Gene;gene=mtnP;gene_biotype=protein_coding;locus_tag=DOLE_RS13445;old_locus_tag=Dole_2618 NC_009943.1 Protein Homology CDS 3160960 3161709 . + 0 ID=cds-WP_012176033.1;Parent=gene-DOLE_RS13445;Dbxref=Genbank:WP_012176033.1;Name=WP_012176033.1;Ontology_term=GO:0006168,GO:0019509,GO:0017061;gbkey=CDS;gene=mtnP;go_function=S-methyl-5-thioadenosine phosphorylase activity|0017061||IEA;go_process=adenine salvage|0006168||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587467.1;locus_tag=DOLE_RS13445;product=S-methyl-5'-thioadenosine phosphorylase;protein_id=WP_012176033.1;transl_table=11 NC_009943.1 RefSeq gene 3161756 3162277 . + . ID=gene-DOLE_RS13450;Name=DOLE_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13450;old_locus_tag=Dole_2619 NC_009943.1 Protein Homology CDS 3161756 3162277 . + 0 ID=cds-WP_012176034.1;Parent=gene-DOLE_RS13450;Dbxref=Genbank:WP_012176034.1;Name=WP_012176034.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176034.1;locus_tag=DOLE_RS13450;product=adenine phosphoribosyltransferase;protein_id=WP_012176034.1;transl_table=11 NC_009943.1 RefSeq gene 3162278 3163255 . + . ID=gene-DOLE_RS13455;Name=DOLE_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13455;old_locus_tag=Dole_2620 NC_009943.1 GeneMarkS-2+ CDS 3162278 3163255 . + 0 ID=cds-WP_012176035.1;Parent=gene-DOLE_RS13455;Dbxref=Genbank:WP_012176035.1;Name=WP_012176035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13455;product=hypothetical protein;protein_id=WP_012176035.1;transl_table=11 NC_009943.1 RefSeq gene 3163361 3164095 . + . ID=gene-DOLE_RS13460;Name=DOLE_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13460;old_locus_tag=Dole_2621 NC_009943.1 Protein Homology CDS 3163361 3164095 . + 0 ID=cds-WP_012176036.1;Parent=gene-DOLE_RS13460;Dbxref=Genbank:WP_012176036.1;Name=WP_012176036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877731.1;locus_tag=DOLE_RS13460;product=YkgJ family cysteine cluster protein;protein_id=WP_012176036.1;transl_table=11 NC_009943.1 RefSeq gene 3164124 3164948 . + . ID=gene-DOLE_RS13465;Name=DOLE_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13465;old_locus_tag=Dole_2622 NC_009943.1 Protein Homology CDS 3164124 3164948 . + 0 ID=cds-WP_012176037.1;Parent=gene-DOLE_RS13465;Dbxref=Genbank:WP_012176037.1;Name=WP_012176037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071469.1;locus_tag=DOLE_RS13465;product=SDR family oxidoreductase;protein_id=WP_012176037.1;transl_table=11 NC_009943.1 RefSeq gene 3164998 3166302 . + . ID=gene-DOLE_RS13470;Name=DOLE_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13470;old_locus_tag=Dole_2623 NC_009943.1 Protein Homology CDS 3164998 3166302 . + 0 ID=cds-WP_012176038.1;Parent=gene-DOLE_RS13470;Dbxref=Genbank:WP_012176038.1;Name=WP_012176038.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=DOLE_RS13470;product=MFS transporter;protein_id=WP_012176038.1;transl_table=11 NC_009943.1 RefSeq gene 3166404 3167171 . - . ID=gene-DOLE_RS13475;Name=DOLE_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13475;old_locus_tag=Dole_2624 NC_009943.1 Protein Homology CDS 3166404 3167171 . - 0 ID=cds-WP_041281186.1;Parent=gene-DOLE_RS13475;Dbxref=Genbank:WP_041281186.1;Name=WP_041281186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876864.1;locus_tag=DOLE_RS13475;product=RNA methyltransferase;protein_id=WP_041281186.1;transl_table=11 NC_009943.1 RefSeq gene 3167442 3167861 . - . ID=gene-DOLE_RS13480;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=DOLE_RS13480;old_locus_tag=Dole_2625 NC_009943.1 Protein Homology CDS 3167442 3167861 . - 0 ID=cds-WP_012176040.1;Parent=gene-DOLE_RS13480;Dbxref=Genbank:WP_012176040.1;Name=WP_012176040.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176040.1;locus_tag=DOLE_RS13480;product=nucleoside-diphosphate kinase;protein_id=WP_012176040.1;transl_table=11 NC_009943.1 RefSeq gene 3168004 3169488 . - . ID=gene-DOLE_RS13485;Name=DOLE_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13485;old_locus_tag=Dole_2626 NC_009943.1 Protein Homology CDS 3168004 3169488 . - 0 ID=cds-WP_167320885.1;Parent=gene-DOLE_RS13485;Dbxref=Genbank:WP_167320885.1;Name=WP_167320885.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS13485;product=tetratricopeptide repeat protein;protein_id=WP_167320885.1;transl_table=11 NC_009943.1 RefSeq gene 3169761 3170561 . - . ID=gene-DOLE_RS17570;Name=DOLE_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17570;old_locus_tag=Dole_2627 NC_009943.1 Protein Homology CDS 3169761 3170561 . - 0 ID=cds-WP_167320886.1;Parent=gene-DOLE_RS17570;Dbxref=Genbank:WP_167320886.1;Name=WP_167320886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=DOLE_RS17570;product=class I SAM-dependent methyltransferase;protein_id=WP_167320886.1;transl_table=11 NC_009943.1 RefSeq gene 3170701 3172314 . - . ID=gene-DOLE_RS13495;Name=DOLE_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13495;old_locus_tag=Dole_2628 NC_009943.1 Protein Homology CDS 3170701 3172314 . - 0 ID=cds-WP_012176043.1;Parent=gene-DOLE_RS13495;Dbxref=Genbank:WP_012176043.1;Name=WP_012176043.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS13495;product=radical SAM protein;protein_id=WP_012176043.1;transl_table=11 NC_009943.1 RefSeq gene 3172521 3173534 . - . ID=gene-DOLE_RS18025;Name=DOLE_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18025;old_locus_tag=Dole_2629 NC_009943.1 Protein Homology CDS 3172521 3173534 . - 0 ID=cds-WP_012176044.1;Parent=gene-DOLE_RS18025;Dbxref=Genbank:WP_012176044.1;Name=WP_012176044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=DOLE_RS18025;product=ABC transporter ATP-binding protein;protein_id=WP_012176044.1;transl_table=11 NC_009943.1 RefSeq gene 3173578 3174267 . - . ID=gene-DOLE_RS13505;Name=DOLE_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13505;old_locus_tag=Dole_2630 NC_009943.1 Protein Homology CDS 3173578 3174267 . - 0 ID=cds-WP_012176045.1;Parent=gene-DOLE_RS13505;Dbxref=Genbank:WP_012176045.1;Name=WP_012176045.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903651.1;locus_tag=DOLE_RS13505;product=ABC transporter permease;protein_id=WP_012176045.1;transl_table=11 NC_009943.1 RefSeq gene 3174508 3175341 . - . ID=gene-DOLE_RS13510;Name=DOLE_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13510;old_locus_tag=Dole_2631 NC_009943.1 Protein Homology CDS 3174508 3175341 . - 0 ID=cds-WP_012176046.1;Parent=gene-DOLE_RS13510;Dbxref=Genbank:WP_012176046.1;Name=WP_012176046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963663.1;locus_tag=DOLE_RS13510;product=substrate-binding domain-containing protein;protein_id=WP_012176046.1;transl_table=11 NC_009943.1 RefSeq gene 3175375 3176448 . - . ID=gene-DOLE_RS13515;Name=DOLE_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13515;old_locus_tag=Dole_2632 NC_009943.1 Protein Homology CDS 3175375 3176448 . - 0 ID=cds-WP_012176047.1;Parent=gene-DOLE_RS13515;Dbxref=Genbank:WP_012176047.1;Name=WP_012176047.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=DOLE_RS13515;product=ABC transporter ATP-binding protein;protein_id=WP_012176047.1;transl_table=11 NC_009943.1 RefSeq gene 3176430 3177239 . - . ID=gene-DOLE_RS13520;Name=DOLE_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13520;old_locus_tag=Dole_2633 NC_009943.1 Protein Homology CDS 3176430 3177239 . - 0 ID=cds-WP_232362711.1;Parent=gene-DOLE_RS13520;Dbxref=Genbank:WP_232362711.1;Name=WP_232362711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948819.1;locus_tag=DOLE_RS13520;product=ABC transporter permease;protein_id=WP_232362711.1;transl_table=11 NC_009943.1 RefSeq gene 3177277 3178224 . - . ID=gene-DOLE_RS13525;Name=wtpA;gbkey=Gene;gene=wtpA;gene_biotype=protein_coding;locus_tag=DOLE_RS13525;old_locus_tag=Dole_2634 NC_009943.1 Protein Homology CDS 3177277 3178224 . - 0 ID=cds-WP_052294348.1;Parent=gene-DOLE_RS13525;Dbxref=Genbank:WP_052294348.1;Name=WP_052294348.1;gbkey=CDS;gene=wtpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957767.1;locus_tag=DOLE_RS13525;product=tungstate ABC transporter substrate-binding protein WtpA;protein_id=WP_052294348.1;transl_table=11 NC_009943.1 RefSeq gene 3178575 3179753 . + . ID=gene-DOLE_RS13530;Name=DOLE_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13530;old_locus_tag=Dole_2635 NC_009943.1 Protein Homology CDS 3178575 3179753 . + 0 ID=cds-WP_012176050.1;Parent=gene-DOLE_RS13530;Dbxref=Genbank:WP_012176050.1;Name=WP_012176050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176532.1;locus_tag=DOLE_RS13530;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012176050.1;transl_table=11 NC_009943.1 RefSeq gene 3180428 3180793 . + . ID=gene-DOLE_RS13535;Name=DOLE_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13535;old_locus_tag=Dole_2636 NC_009943.1 Protein Homology CDS 3180428 3180793 . + 0 ID=cds-WP_012176051.1;Parent=gene-DOLE_RS13535;Dbxref=Genbank:WP_012176051.1;Name=WP_012176051.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024949.2;locus_tag=DOLE_RS13535;product=helix-turn-helix domain-containing protein;protein_id=WP_012176051.1;transl_table=11 NC_009943.1 RefSeq gene 3180807 3182087 . + . ID=gene-DOLE_RS13540;Name=DOLE_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13540;old_locus_tag=Dole_2637 NC_009943.1 Protein Homology CDS 3180807 3182087 . + 0 ID=cds-WP_269719167.1;Parent=gene-DOLE_RS13540;Dbxref=Genbank:WP_269719167.1;Name=WP_269719167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019421.2;locus_tag=DOLE_RS13540;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_269719167.1;transl_table=11 NC_009943.1 RefSeq gene 3182291 3183307 . + . ID=gene-DOLE_RS13545;Name=DOLE_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13545;old_locus_tag=Dole_2638 NC_009943.1 Protein Homology CDS 3182291 3183307 . + 0 ID=cds-WP_012175873.1-2;Parent=gene-DOLE_RS13545;Dbxref=Genbank:WP_012175873.1;Name=WP_012175873.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015722803.1;locus_tag=DOLE_RS13545;product=IS5 family transposase;protein_id=WP_012175873.1;transl_table=11 NC_009943.1 RefSeq gene 3183555 3183848 . + . ID=gene-DOLE_RS18030;Name=DOLE_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18030;old_locus_tag=Dole_2639 NC_009943.1 Protein Homology CDS 3183555 3183848 . + 0 ID=cds-WP_012176053.1;Parent=gene-DOLE_RS18030;Dbxref=Genbank:WP_012176053.1;Name=WP_012176053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964524.1;locus_tag=DOLE_RS18030;product=BrnT family toxin;protein_id=WP_012176053.1;transl_table=11 NC_009943.1 RefSeq gene 3183820 3184047 . + . ID=gene-DOLE_RS13550;Name=DOLE_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13550;old_locus_tag=Dole_2640 NC_009943.1 Protein Homology CDS 3183820 3184047 . + 0 ID=cds-WP_012176054.1;Parent=gene-DOLE_RS13550;Dbxref=Genbank:WP_012176054.1;Name=WP_012176054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964525.1;locus_tag=DOLE_RS13550;product=hypothetical protein;protein_id=WP_012176054.1;transl_table=11 NC_009943.1 RefSeq gene 3184612 3185061 . - . ID=gene-DOLE_RS18265;Name=DOLE_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18265 NC_009943.1 GeneMarkS-2+ CDS 3184612 3185061 . - 0 ID=cds-WP_153304437.1;Parent=gene-DOLE_RS18265;Dbxref=Genbank:WP_153304437.1;Name=WP_153304437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18265;product=hypothetical protein;protein_id=WP_153304437.1;transl_table=11 NC_009943.1 RefSeq gene 3185569 3186087 . - . ID=gene-DOLE_RS13560;Name=DOLE_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13560 NC_009943.1 GeneMarkS-2+ CDS 3185569 3186087 . - 0 ID=cds-WP_041280582.1;Parent=gene-DOLE_RS13560;Dbxref=Genbank:WP_041280582.1;Name=WP_041280582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13560;product=hypothetical protein;protein_id=WP_041280582.1;transl_table=11 NC_009943.1 RefSeq gene 3186242 3186646 . - . ID=gene-DOLE_RS13565;Name=DOLE_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13565;old_locus_tag=Dole_2642 NC_009943.1 Protein Homology CDS 3186242 3186646 . - 0 ID=cds-WP_012176056.1;Parent=gene-DOLE_RS13565;Dbxref=Genbank:WP_012176056.1;Name=WP_012176056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948426.1;locus_tag=DOLE_RS13565;product=Hsp20/alpha crystallin family protein;protein_id=WP_012176056.1;transl_table=11 NC_009943.1 RefSeq gene 3186700 3187155 . - . ID=gene-DOLE_RS13570;Name=DOLE_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13570;old_locus_tag=Dole_2643 NC_009943.1 Protein Homology CDS 3186700 3187155 . - 0 ID=cds-WP_012176057.1;Parent=gene-DOLE_RS13570;Dbxref=Genbank:WP_012176057.1;Name=WP_012176057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878846.1;locus_tag=DOLE_RS13570;product=Hsp20/alpha crystallin family protein;protein_id=WP_012176057.1;transl_table=11 NC_009943.1 RefSeq gene 3187578 3187757 . + . ID=gene-DOLE_RS13575;Name=DOLE_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13575;old_locus_tag=Dole_2644 NC_009943.1 Protein Homology CDS 3187578 3187757 . + 0 ID=cds-WP_012176058.1;Parent=gene-DOLE_RS13575;Dbxref=Genbank:WP_012176058.1;Name=WP_012176058.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402914.1;locus_tag=DOLE_RS13575;product=rubredoxin;protein_id=WP_012176058.1;transl_table=11 NC_009943.1 RefSeq gene 3187782 3188234 . + . ID=gene-DOLE_RS13580;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=DOLE_RS13580;old_locus_tag=Dole_2645 NC_009943.1 Protein Homology CDS 3187782 3188234 . + 0 ID=cds-WP_012176059.1;Parent=gene-DOLE_RS13580;Dbxref=Genbank:WP_012176059.1;Name=WP_012176059.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957240.1;locus_tag=DOLE_RS13580;product=thioredoxin;protein_id=WP_012176059.1;transl_table=11 NC_009943.1 RefSeq gene 3188579 3188788 . + . ID=gene-DOLE_RS13585;Name=DOLE_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13585;old_locus_tag=Dole_2646 NC_009943.1 Protein Homology CDS 3188579 3188788 . + 0 ID=cds-WP_012176060.1;Parent=gene-DOLE_RS13585;Dbxref=Genbank:WP_012176060.1;Name=WP_012176060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074429.1;locus_tag=DOLE_RS13585;product=hypothetical protein;protein_id=WP_012176060.1;transl_table=11 NC_009943.1 RefSeq gene 3188891 3189466 . + . ID=gene-DOLE_RS13590;Name=DOLE_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13590;old_locus_tag=Dole_2647 NC_009943.1 Protein Homology CDS 3188891 3189466 . + 0 ID=cds-WP_012176061.1;Parent=gene-DOLE_RS13590;Dbxref=Genbank:WP_012176061.1;Name=WP_012176061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966864.1;locus_tag=DOLE_RS13590;product=rubrerythrin family protein;protein_id=WP_012176061.1;transl_table=11 NC_009943.1 RefSeq gene 3189548 3189982 . + . ID=gene-DOLE_RS13595;Name=DOLE_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13595;old_locus_tag=Dole_2648 NC_009943.1 Protein Homology CDS 3189548 3189982 . + 0 ID=cds-WP_012176062.1;Parent=gene-DOLE_RS13595;Dbxref=Genbank:WP_012176062.1;Name=WP_012176062.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957239.1;locus_tag=DOLE_RS13595;product=flavodoxin domain-containing protein;protein_id=WP_012176062.1;transl_table=11 NC_009943.1 RefSeq gene 3190081 3191391 . + . ID=gene-DOLE_RS13600;Name=DOLE_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13600;old_locus_tag=Dole_2649 NC_009943.1 Protein Homology CDS 3190081 3191391 . + 0 ID=cds-WP_012176063.1;Parent=gene-DOLE_RS13600;Dbxref=Genbank:WP_012176063.1;Name=WP_012176063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947124.1;locus_tag=DOLE_RS13600;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_012176063.1;transl_table=11 NC_009943.1 RefSeq gene 3191403 3192416 . + . ID=gene-DOLE_RS13605;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=DOLE_RS13605;old_locus_tag=Dole_2650 NC_009943.1 Protein Homology CDS 3191403 3192416 . + 0 ID=cds-WP_012176064.1;Parent=gene-DOLE_RS13605;Dbxref=Genbank:WP_012176064.1;Name=WP_012176064.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905863.1;locus_tag=DOLE_RS13605;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_012176064.1;transl_table=11 NC_009943.1 RefSeq gene 3192744 3193085 . + . ID=gene-DOLE_RS13610;Name=DOLE_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13610;old_locus_tag=Dole_2651 NC_009943.1 Protein Homology CDS 3192744 3193085 . + 0 ID=cds-WP_012176065.1;Parent=gene-DOLE_RS13610;Dbxref=Genbank:WP_012176065.1;Name=WP_012176065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947138.1;locus_tag=DOLE_RS13610;product=cytochrome c3 family protein;protein_id=WP_012176065.1;transl_table=11 NC_009943.1 RefSeq gene 3193124 3193798 . + . ID=gene-DOLE_RS13615;Name=DOLE_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13615;old_locus_tag=Dole_2652 NC_009943.1 Protein Homology CDS 3193124 3193798 . + 0 ID=cds-WP_012176066.1;Parent=gene-DOLE_RS13615;Dbxref=Genbank:WP_012176066.1;Name=WP_012176066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965213.1;locus_tag=DOLE_RS13615;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_012176066.1;transl_table=11 NC_009943.1 RefSeq gene 3193884 3194045 . + . ID=gene-DOLE_RS13620;Name=DOLE_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13620;old_locus_tag=Dole_2653 NC_009943.1 Protein Homology CDS 3193884 3194045 . + 0 ID=cds-WP_012176067.1;Parent=gene-DOLE_RS13620;Dbxref=Genbank:WP_012176067.1;Name=WP_012176067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588140.1;locus_tag=DOLE_RS13620;product=rubredoxin;protein_id=WP_012176067.1;transl_table=11 NC_009943.1 RefSeq gene 3194155 3195345 . + . ID=gene-DOLE_RS13625;Name=DOLE_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13625;old_locus_tag=Dole_2654 NC_009943.1 Protein Homology CDS 3194155 3195345 . + 0 ID=cds-WP_012176068.1;Parent=gene-DOLE_RS13625;Dbxref=Genbank:WP_012176068.1;Name=WP_012176068.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947140.1;locus_tag=DOLE_RS13625;product=flavodoxin domain-containing protein;protein_id=WP_012176068.1;transl_table=11 NC_009943.1 RefSeq gene 3195348 3195533 . + . ID=gene-DOLE_RS13630;Name=DOLE_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13630;old_locus_tag=Dole_2655 NC_009943.1 Protein Homology CDS 3195348 3195533 . + 0 ID=cds-WP_012176069.1;Parent=gene-DOLE_RS13630;Dbxref=Genbank:WP_012176069.1;Name=WP_012176069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959411.1;locus_tag=DOLE_RS13630;product=ferredoxin;protein_id=WP_012176069.1;transl_table=11 NC_009943.1 RefSeq gene 3195622 3196125 . - . ID=gene-DOLE_RS13635;Name=DOLE_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13635;old_locus_tag=Dole_2656 NC_009943.1 GeneMarkS-2+ CDS 3195622 3196125 . - 0 ID=cds-WP_012176070.1;Parent=gene-DOLE_RS13635;Dbxref=Genbank:WP_012176070.1;Name=WP_012176070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13635;product=hypothetical protein;protein_id=WP_012176070.1;transl_table=11 NC_009943.1 RefSeq gene 3196172 3198922 . - . ID=gene-DOLE_RS13640;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=DOLE_RS13640;old_locus_tag=Dole_2657 NC_009943.1 Protein Homology CDS 3196172 3198922 . - 0 ID=cds-WP_012176071.1;Parent=gene-DOLE_RS13640;Dbxref=Genbank:WP_012176071.1;Name=WP_012176071.1;Ontology_term=GO:0015976,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014958200.1;locus_tag=DOLE_RS13640;product=pyruvate%2C phosphate dikinase;protein_id=WP_012176071.1;transl_table=11 NC_009943.1 RefSeq gene 3199148 3200125 . + . ID=gene-DOLE_RS13645;Name=DOLE_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13645;old_locus_tag=Dole_2658 NC_009943.1 Protein Homology CDS 3199148 3200125 . + 0 ID=cds-WP_012176072.1;Parent=gene-DOLE_RS13645;Dbxref=Genbank:WP_012176072.1;Name=WP_012176072.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906324.1;locus_tag=DOLE_RS13645;product=class I SAM-dependent methyltransferase;protein_id=WP_012176072.1;transl_table=11 NC_009943.1 RefSeq gene 3200116 3201090 . + . ID=gene-DOLE_RS13650;Name=DOLE_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13650;old_locus_tag=Dole_2659 NC_009943.1 Protein Homology CDS 3200116 3201090 . + 0 ID=cds-WP_012176073.1;Parent=gene-DOLE_RS13650;Dbxref=Genbank:WP_012176073.1;Name=WP_012176073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013380.2;locus_tag=DOLE_RS13650;product=tRNA-dihydrouridine synthase family protein;protein_id=WP_012176073.1;transl_table=11 NC_009943.1 RefSeq gene 3201077 3201271 . - . ID=gene-DOLE_RS13655;Name=DOLE_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13655;old_locus_tag=Dole_2660 NC_009943.1 GeneMarkS-2+ CDS 3201077 3201271 . - 0 ID=cds-WP_012176074.1;Parent=gene-DOLE_RS13655;Dbxref=Genbank:WP_012176074.1;Name=WP_012176074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13655;product=hypothetical protein;protein_id=WP_012176074.1;transl_table=11 NC_009943.1 RefSeq gene 3201521 3202516 . - . ID=gene-DOLE_RS13660;Name=DOLE_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13660;old_locus_tag=Dole_2661 NC_009943.1 Protein Homology CDS 3201521 3202516 . - 0 ID=cds-WP_012176075.1;Parent=gene-DOLE_RS13660;Dbxref=Genbank:WP_012176075.1;Name=WP_012176075.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: protein motif:HMM:NF013087.2;locus_tag=DOLE_RS13660;product=methyltransferase;protein_id=WP_012176075.1;transl_table=11 NC_009943.1 RefSeq gene 3202717 3203517 . - . ID=gene-DOLE_RS13665;Name=DOLE_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13665;old_locus_tag=Dole_2662 NC_009943.1 Protein Homology CDS 3202717 3203517 . - 0 ID=cds-WP_012176076.1;Parent=gene-DOLE_RS13665;Dbxref=Genbank:WP_012176076.1;Name=WP_012176076.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF005559.1;locus_tag=DOLE_RS13665;product=glucose 1-dehydrogenase;protein_id=WP_012176076.1;transl_table=11 NC_009943.1 RefSeq gene 3203517 3203900 . - . ID=gene-DOLE_RS18270;Name=DOLE_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18270 NC_009943.1 GeneMarkS-2+ CDS 3203517 3203900 . - 0 ID=cds-WP_153304438.1;Parent=gene-DOLE_RS18270;Dbxref=Genbank:WP_153304438.1;Name=WP_153304438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18270;product=hypothetical protein;protein_id=WP_153304438.1;transl_table=11 NC_009943.1 RefSeq gene 3203955 3205016 . - . ID=gene-DOLE_RS13670;Name=DOLE_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13670;old_locus_tag=Dole_2663 NC_009943.1 Protein Homology CDS 3203955 3205016 . - 0 ID=cds-WP_012176077.1;Parent=gene-DOLE_RS13670;Dbxref=Genbank:WP_012176077.1;Name=WP_012176077.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875407.1;locus_tag=DOLE_RS13670;product=branched-chain amino acid aminotransferase;protein_id=WP_012176077.1;transl_table=11 NC_009943.1 RefSeq gene 3205128 3205580 . - . ID=gene-DOLE_RS13675;Name=DOLE_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13675;old_locus_tag=Dole_2664 NC_009943.1 Protein Homology CDS 3205128 3205580 . - 0 ID=cds-WP_012176078.1;Parent=gene-DOLE_RS13675;Dbxref=Genbank:WP_012176078.1;Name=WP_012176078.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015444.2;locus_tag=DOLE_RS13675;product=DNA-binding protein;protein_id=WP_012176078.1;transl_table=11 NC_009943.1 RefSeq gene 3205834 3206631 . + . ID=gene-DOLE_RS13680;Name=DOLE_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13680;old_locus_tag=Dole_2665 NC_009943.1 Protein Homology CDS 3205834 3206631 . + 0 ID=cds-WP_012176079.1;Parent=gene-DOLE_RS13680;Dbxref=Genbank:WP_012176079.1;Name=WP_012176079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876633.1;locus_tag=DOLE_RS13680;product=YkgJ family cysteine cluster protein;protein_id=WP_012176079.1;transl_table=11 NC_009943.1 RefSeq gene 3206650 3207822 . - . ID=gene-DOLE_RS13685;Name=DOLE_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13685;old_locus_tag=Dole_2666 NC_009943.1 Protein Homology CDS 3206650 3207822 . - 0 ID=cds-WP_012176080.1;Parent=gene-DOLE_RS13685;Dbxref=Genbank:WP_012176080.1;Name=WP_012176080.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=DOLE_RS13685;product=EstA family serine hydrolase;protein_id=WP_012176080.1;transl_table=11 NC_009943.1 RefSeq gene 3207833 3208867 . - . ID=gene-DOLE_RS13690;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=DOLE_RS13690;old_locus_tag=Dole_2667 NC_009943.1 Protein Homology CDS 3207833 3208867 . - 0 ID=cds-WP_012176081.1;Parent=gene-DOLE_RS13690;Dbxref=Genbank:WP_012176081.1;Name=WP_012176081.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586016.1;locus_tag=DOLE_RS13690;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_012176081.1;transl_table=11 NC_009943.1 RefSeq gene 3209130 3209750 . + . ID=gene-DOLE_RS13695;Name=DOLE_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13695;old_locus_tag=Dole_2668 NC_009943.1 Protein Homology CDS 3209130 3209750 . + 0 ID=cds-WP_012176082.1;Parent=gene-DOLE_RS13695;Dbxref=Genbank:WP_012176082.1;Name=WP_012176082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876635.1;locus_tag=DOLE_RS13695;product=tetratricopeptide repeat protein;protein_id=WP_012176082.1;transl_table=11 NC_009943.1 RefSeq gene 3209852 3211165 . + . ID=gene-DOLE_RS13700;Name=dsrA;gbkey=Gene;gene=dsrA;gene_biotype=protein_coding;locus_tag=DOLE_RS13700;old_locus_tag=Dole_2669 NC_009943.1 Protein Homology CDS 3209852 3211165 . + 0 ID=cds-WP_012176083.1;Parent=gene-DOLE_RS13700;Dbxref=Genbank:WP_012176083.1;Name=WP_012176083.1;Ontology_term=GO:0019420,GO:0018551;gbkey=CDS;gene=dsrA;go_function=hydrogensulfite reductase activity|0018551||IEA;go_process=dissimilatory sulfate reduction|0019420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586018.1;locus_tag=DOLE_RS13700;product=dissimilatory-type sulfite reductase subunit alpha;protein_id=WP_012176083.1;transl_table=11 NC_009943.1 RefSeq gene 3211180 3212334 . + . ID=gene-DOLE_RS13705;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=DOLE_RS13705;old_locus_tag=Dole_2670 NC_009943.1 Protein Homology CDS 3211180 3212334 . + 0 ID=cds-WP_012176084.1;Parent=gene-DOLE_RS13705;Dbxref=Genbank:WP_012176084.1;Name=WP_012176084.1;Ontology_term=GO:0019420,GO:0018551;gbkey=CDS;gene=dsrB;go_function=hydrogensulfite reductase activity|0018551||IEA;go_process=dissimilatory sulfate reduction|0019420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956082.1;locus_tag=DOLE_RS13705;product=dissimilatory-type sulfite reductase subunit beta;protein_id=WP_012176084.1;transl_table=11 NC_009943.1 RefSeq gene 3212405 3212653 . + . ID=gene-DOLE_RS13710;Name=DOLE_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13710;old_locus_tag=Dole_2671 NC_009943.1 Protein Homology CDS 3212405 3212653 . + 0 ID=cds-WP_012176085.1;Parent=gene-DOLE_RS13710;Dbxref=Genbank:WP_012176085.1;Name=WP_012176085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966153.1;locus_tag=DOLE_RS13710;product=dissimilatory sulfite reductase D family protein;protein_id=WP_012176085.1;transl_table=11 NC_009943.1 RefSeq gene 3212714 3214117 . + . ID=gene-DOLE_RS13715;Name=DOLE_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13715;old_locus_tag=Dole_2672 NC_009943.1 Protein Homology CDS 3212714 3214117 . + 0 ID=cds-WP_012176086.1;Parent=gene-DOLE_RS13715;Dbxref=Genbank:WP_012176086.1;Name=WP_012176086.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949024.1;locus_tag=DOLE_RS13715;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_012176086.1;transl_table=11 NC_009943.1 RefSeq gene 3214361 3216571 . - . ID=gene-DOLE_RS13720;Name=DOLE_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13720;old_locus_tag=Dole_2673 NC_009943.1 Protein Homology CDS 3214361 3216571 . - 0 ID=cds-WP_012176087.1;Parent=gene-DOLE_RS13720;Dbxref=Genbank:WP_012176087.1;Name=WP_012176087.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:TIGR01448.1;locus_tag=DOLE_RS13720;product=ATP-dependent RecD-like DNA helicase;protein_id=WP_012176087.1;transl_table=11 NC_009943.1 RefSeq gene 3216568 3217152 . - . ID=gene-DOLE_RS13725;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=DOLE_RS13725;old_locus_tag=Dole_2674 NC_009943.1 Protein Homology CDS 3216568 3217152 . - 0 ID=cds-WP_041280583.1;Parent=gene-DOLE_RS13725;Dbxref=Genbank:WP_041280583.1;Name=WP_041280583.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966744.1;locus_tag=DOLE_RS13725;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_041280583.1;transl_table=11 NC_009943.1 RefSeq gene 3217152 3217847 . - . ID=gene-DOLE_RS13730;Name=DOLE_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13730;old_locus_tag=Dole_2675 NC_009943.1 Protein Homology CDS 3217152 3217847 . - 0 ID=cds-WP_041281192.1;Parent=gene-DOLE_RS13730;Dbxref=Genbank:WP_041281192.1;Name=WP_041281192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906694.1;locus_tag=DOLE_RS13730;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_041281192.1;transl_table=11 NC_009943.1 RefSeq gene 3218034 3219197 . + . ID=gene-DOLE_RS13735;Name=DOLE_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13735;old_locus_tag=Dole_2676 NC_009943.1 Protein Homology CDS 3218034 3219197 . + 0 ID=cds-WP_012176090.1;Parent=gene-DOLE_RS13735;Dbxref=Genbank:WP_012176090.1;Name=WP_012176090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071319.1;locus_tag=DOLE_RS13735;product=MFS transporter;protein_id=WP_012176090.1;transl_table=11 NC_009943.1 RefSeq gene 3219224 3220300 . + . ID=gene-DOLE_RS13740;Name=DOLE_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13740;old_locus_tag=Dole_2677 NC_009943.1 Protein Homology CDS 3219224 3220300 . + 0 ID=cds-WP_012176091.1;Parent=gene-DOLE_RS13740;Dbxref=Genbank:WP_012176091.1;Name=WP_012176091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724352.1;locus_tag=DOLE_RS13740;product=DUF2157 domain-containing protein;protein_id=WP_012176091.1;transl_table=11 NC_009943.1 RefSeq gene 3220297 3221172 . + . ID=gene-DOLE_RS13745;Name=DOLE_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13745;old_locus_tag=Dole_2678 NC_009943.1 Protein Homology CDS 3220297 3221172 . + 0 ID=cds-WP_012176092.1;Parent=gene-DOLE_RS13745;Dbxref=Genbank:WP_012176092.1;Name=WP_012176092.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027432.2;locus_tag=DOLE_RS13745;product=DUF4824 family protein;protein_id=WP_012176092.1;transl_table=11 NC_009943.1 RefSeq gene 3221169 3222380 . + . ID=gene-DOLE_RS13750;Name=DOLE_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13750;old_locus_tag=Dole_2679 NC_009943.1 Protein Homology CDS 3221169 3222380 . + 0 ID=cds-WP_012176093.1;Parent=gene-DOLE_RS13750;Dbxref=Genbank:WP_012176093.1;Name=WP_012176093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021127.2;locus_tag=DOLE_RS13750;product=CapA family protein;protein_id=WP_012176093.1;transl_table=11 NC_009943.1 RefSeq gene 3222477 3223445 . + . ID=gene-DOLE_RS13755;Name=DOLE_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13755;old_locus_tag=Dole_2680 NC_009943.1 Protein Homology CDS 3222477 3223445 . + 0 ID=cds-WP_012176094.1;Parent=gene-DOLE_RS13755;Dbxref=Genbank:WP_012176094.1;Name=WP_012176094.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875095.1;locus_tag=DOLE_RS13755;product=asparagine synthase-related protein;protein_id=WP_012176094.1;transl_table=11 NC_009943.1 RefSeq gene 3223461 3224144 . + . ID=gene-DOLE_RS13760;Name=DOLE_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13760;old_locus_tag=Dole_2681 NC_009943.1 Protein Homology CDS 3223461 3224144 . + 0 ID=cds-WP_012176095.1;Parent=gene-DOLE_RS13760;Dbxref=Genbank:WP_012176095.1;Name=WP_012176095.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016874.2;locus_tag=DOLE_RS13760;product=nucleoside 2-deoxyribosyltransferase;protein_id=WP_012176095.1;transl_table=11 NC_009943.1 RefSeq gene 3224153 3224584 . - . ID=gene-DOLE_RS13765;Name=DOLE_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13765;old_locus_tag=Dole_2682 NC_009943.1 GeneMarkS-2+ CDS 3224153 3224584 . - 0 ID=cds-WP_012176096.1;Parent=gene-DOLE_RS13765;Dbxref=Genbank:WP_012176096.1;Name=WP_012176096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13765;product=hypothetical protein;protein_id=WP_012176096.1;transl_table=11 NC_009943.1 RefSeq gene 3224789 3227530 . - . ID=gene-DOLE_RS17580;Name=DOLE_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17580;old_locus_tag=Dole_2683 NC_009943.1 Protein Homology CDS 3224789 3227530 . - 0 ID=cds-WP_012176097.1;Parent=gene-DOLE_RS17580;Dbxref=Genbank:WP_012176097.1;Name=WP_012176097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012321.2;locus_tag=DOLE_RS17580;product=VWA domain-containing protein;protein_id=WP_012176097.1;transl_table=11 NC_009943.1 RefSeq gene 3227718 3228539 . - . ID=gene-DOLE_RS13775;Name=DOLE_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13775;old_locus_tag=Dole_2684 NC_009943.1 Protein Homology CDS 3227718 3228539 . - 0 ID=cds-WP_232362712.1;Parent=gene-DOLE_RS13775;Dbxref=Genbank:WP_232362712.1;Name=WP_232362712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405637.1;locus_tag=DOLE_RS13775;product=CbbQ/NirQ/NorQ/GpvN family protein;protein_id=WP_232362712.1;transl_table=11 NC_009943.1 RefSeq gene 3228750 3229913 . + . ID=gene-DOLE_RS13780;Name=DOLE_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13780;old_locus_tag=Dole_2685 NC_009943.1 Protein Homology CDS 3228750 3229913 . + 0 ID=cds-WP_012176099.1;Parent=gene-DOLE_RS13780;Dbxref=Genbank:WP_012176099.1;Name=WP_012176099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968433.1;locus_tag=DOLE_RS13780;product=TraB/GumN family protein;protein_id=WP_012176099.1;transl_table=11 NC_009943.1 RefSeq gene 3230124 3232325 . + . ID=gene-DOLE_RS13785;Name=DOLE_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13785;old_locus_tag=Dole_2686 NC_009943.1 GeneMarkS-2+ CDS 3230124 3232325 . + 0 ID=cds-WP_012176100.1;Parent=gene-DOLE_RS13785;Dbxref=Genbank:WP_012176100.1;Name=WP_012176100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13785;product=hypothetical protein;protein_id=WP_012176100.1;transl_table=11 NC_009943.1 RefSeq gene 3232502 3232816 . + . ID=gene-DOLE_RS13790;Name=DOLE_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13790;old_locus_tag=Dole_2687 NC_009943.1 Protein Homology CDS 3232502 3232816 . + 0 ID=cds-WP_012176101.1;Parent=gene-DOLE_RS13790;Dbxref=Genbank:WP_012176101.1;Name=WP_012176101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071099.1;locus_tag=DOLE_RS13790;product=STAS domain-containing protein;protein_id=WP_012176101.1;transl_table=11 NC_009943.1 RefSeq gene 3232949 3234136 . - . ID=gene-DOLE_RS13795;Name=DOLE_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13795;old_locus_tag=Dole_2688 NC_009943.1 GeneMarkS-2+ CDS 3232949 3234136 . - 0 ID=cds-WP_012176102.1;Parent=gene-DOLE_RS13795;Dbxref=Genbank:WP_012176102.1;Name=WP_012176102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13795;product=hypothetical protein;protein_id=WP_012176102.1;transl_table=11 NC_009943.1 RefSeq gene 3234286 3236391 . + . ID=gene-DOLE_RS13800;Name=DOLE_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13800;old_locus_tag=Dole_2689 NC_009943.1 Protein Homology CDS 3234286 3236391 . + 0 ID=cds-WP_041280584.1;Parent=gene-DOLE_RS13800;Dbxref=Genbank:WP_041280584.1;Name=WP_041280584.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018662.2;locus_tag=DOLE_RS13800;product=SH3 domain-containing protein;protein_id=WP_041280584.1;transl_table=11 NC_009943.1 RefSeq gene 3236388 3240521 . - . ID=gene-DOLE_RS13805;Name=DOLE_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13805;old_locus_tag=Dole_2690 NC_009943.1 GeneMarkS-2+ CDS 3236388 3240521 . - 0 ID=cds-WP_012176104.1;Parent=gene-DOLE_RS13805;Dbxref=Genbank:WP_012176104.1;Name=WP_012176104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13805;product=hypothetical protein;protein_id=WP_012176104.1;transl_table=11 NC_009943.1 RefSeq gene 3240760 3240836 . - . ID=gene-DOLE_RS13810;Name=DOLE_RS13810;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS13810;old_locus_tag=Dole_R0040 NC_009943.1 tRNAscan-SE tRNA 3240760 3240836 . - . ID=rna-DOLE_RS13810;Parent=gene-DOLE_RS13810;anticodon=(pos:complement(3240800..3240802));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13810;product=tRNA-Pro NC_009943.1 tRNAscan-SE exon 3240760 3240836 . - . ID=exon-DOLE_RS13810-1;Parent=rna-DOLE_RS13810;anticodon=(pos:complement(3240800..3240802));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13810;product=tRNA-Pro NC_009943.1 RefSeq gene 3240939 3241685 . - . ID=gene-DOLE_RS13815;Name=DOLE_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13815;old_locus_tag=Dole_2691 NC_009943.1 Protein Homology CDS 3240939 3241685 . - 0 ID=cds-WP_041280585.1;Parent=gene-DOLE_RS13815;Dbxref=Genbank:WP_041280585.1;Name=WP_041280585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013670.2;locus_tag=DOLE_RS13815;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_041280585.1;transl_table=11 NC_009943.1 RefSeq gene 3241840 3241926 . + . ID=gene-DOLE_RS13820;Name=DOLE_RS13820;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS13820;old_locus_tag=Dole_R0041 NC_009943.1 tRNAscan-SE tRNA 3241840 3241926 . + . ID=rna-DOLE_RS13820;Parent=gene-DOLE_RS13820;anticodon=(pos:3241874..3241876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13820;product=tRNA-Leu NC_009943.1 tRNAscan-SE exon 3241840 3241926 . + . ID=exon-DOLE_RS13820-1;Parent=rna-DOLE_RS13820;anticodon=(pos:3241874..3241876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13820;product=tRNA-Leu NC_009943.1 RefSeq gene 3242028 3243359 . + . ID=gene-DOLE_RS13825;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=DOLE_RS13825;old_locus_tag=Dole_2692 NC_009943.1 Protein Homology CDS 3242028 3243359 . + 0 ID=cds-WP_012176106.1;Parent=gene-DOLE_RS13825;Dbxref=Genbank:WP_012176106.1;Name=WP_012176106.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176106.1;locus_tag=DOLE_RS13825;product=trigger factor;protein_id=WP_012176106.1;transl_table=11 NC_009943.1 RefSeq gene 3243387 3244004 . + . ID=gene-DOLE_RS13830;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=DOLE_RS13830;old_locus_tag=Dole_2693 NC_009943.1 Protein Homology CDS 3243387 3244004 . + 0 ID=cds-WP_012176107.1;Parent=gene-DOLE_RS13830;Dbxref=Genbank:WP_012176107.1;Name=WP_012176107.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176107.1;locus_tag=DOLE_RS13830;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_012176107.1;transl_table=11 NC_009943.1 RefSeq gene 3244007 3245260 . + . ID=gene-DOLE_RS13835;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=DOLE_RS13835;old_locus_tag=Dole_2694 NC_009943.1 Protein Homology CDS 3244007 3245260 . + 0 ID=cds-WP_012176108.1;Parent=gene-DOLE_RS13835;Dbxref=Genbank:WP_012176108.1;Name=WP_012176108.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176108.1;locus_tag=DOLE_RS13835;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_012176108.1;transl_table=11 NC_009943.1 RefSeq gene 3245324 3247759 . + . ID=gene-DOLE_RS13840;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=DOLE_RS13840;old_locus_tag=Dole_2695 NC_009943.1 Protein Homology CDS 3245324 3247759 . + 0 ID=cds-WP_012176109.1;Parent=gene-DOLE_RS13840;Dbxref=Genbank:WP_012176109.1;Name=WP_012176109.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878197.1;locus_tag=DOLE_RS13840;product=endopeptidase La;protein_id=WP_012176109.1;transl_table=11 NC_009943.1 RefSeq gene 3247831 3247906 . + . ID=gene-DOLE_RS13845;Name=DOLE_RS13845;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS13845;old_locus_tag=Dole_R0042 NC_009943.1 tRNAscan-SE tRNA 3247831 3247906 . + . ID=rna-DOLE_RS13845;Parent=gene-DOLE_RS13845;anticodon=(pos:3247864..3247866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13845;product=tRNA-Val NC_009943.1 tRNAscan-SE exon 3247831 3247906 . + . ID=exon-DOLE_RS13845-1;Parent=rna-DOLE_RS13845;anticodon=(pos:3247864..3247866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13845;product=tRNA-Val NC_009943.1 RefSeq gene 3247930 3248007 . + . ID=gene-DOLE_RS13850;Name=DOLE_RS13850;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS13850;old_locus_tag=Dole_R0043 NC_009943.1 tRNAscan-SE tRNA 3247930 3248007 . + . ID=rna-DOLE_RS13850;Parent=gene-DOLE_RS13850;anticodon=(pos:3247965..3247967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13850;product=tRNA-Asp NC_009943.1 tRNAscan-SE exon 3247930 3248007 . + . ID=exon-DOLE_RS13850-1;Parent=rna-DOLE_RS13850;anticodon=(pos:3247965..3247967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS13850;product=tRNA-Asp NC_009943.1 RefSeq gene 3248071 3250659 . - . ID=gene-DOLE_RS13855;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=DOLE_RS13855;old_locus_tag=Dole_2696 NC_009943.1 Protein Homology CDS 3248071 3250659 . - 0 ID=cds-WP_012176110.1;Parent=gene-DOLE_RS13855;Dbxref=Genbank:WP_012176110.1;Name=WP_012176110.1;Ontology_term=GO:0006457,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725258.1;locus_tag=DOLE_RS13855;product=ATP-dependent chaperone ClpB;protein_id=WP_012176110.1;transl_table=11 NC_009943.1 RefSeq gene 3250950 3251411 . - . ID=gene-DOLE_RS13860;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=DOLE_RS13860;old_locus_tag=Dole_2697 NC_009943.1 Protein Homology CDS 3250950 3251411 . - 0 ID=cds-WP_041280586.1;Parent=gene-DOLE_RS13860;Dbxref=Genbank:WP_041280586.1;Name=WP_041280586.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956962.1;locus_tag=DOLE_RS13860;product=SsrA-binding protein SmpB;protein_id=WP_041280586.1;transl_table=11 NC_009943.1 RefSeq gene 3251452 3253227 . - . ID=gene-DOLE_RS13865;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=DOLE_RS13865;old_locus_tag=Dole_2698 NC_009943.1 Protein Homology CDS 3251452 3253227 . - 0 ID=cds-WP_012176112.1;Parent=gene-DOLE_RS13865;Dbxref=Genbank:WP_012176112.1;Name=WP_012176112.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956961.1;locus_tag=DOLE_RS13865;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_012176112.1;transl_table=11 NC_009943.1 RefSeq gene 3253234 3253515 . - . ID=gene-DOLE_RS13870;Name=DOLE_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13870;old_locus_tag=Dole_2699 NC_009943.1 Protein Homology CDS 3253234 3253515 . - 0 ID=cds-WP_012176113.1;Parent=gene-DOLE_RS13870;Dbxref=Genbank:WP_012176113.1;Name=WP_012176113.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876147.1;locus_tag=DOLE_RS13870;product=HPr family phosphocarrier protein;protein_id=WP_012176113.1;transl_table=11 NC_009943.1 RefSeq gene 3253775 3257083 . + . ID=gene-DOLE_RS17585;Name=DOLE_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17585;old_locus_tag=Dole_2700 NC_009943.1 Protein Homology CDS 3253775 3257083 . + 0 ID=cds-WP_012176114.1;Parent=gene-DOLE_RS17585;Dbxref=Genbank:WP_012176114.1;Name=WP_012176114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=DOLE_RS17585;product=PAS domain S-box protein;protein_id=WP_012176114.1;transl_table=11 NC_009943.1 RefSeq gene 3257355 3260078 . + . ID=gene-DOLE_RS13880;Name=DOLE_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13880;old_locus_tag=Dole_2701 NC_009943.1 Protein Homology CDS 3257355 3260078 . + 0 ID=cds-WP_012176115.1;Parent=gene-DOLE_RS13880;Dbxref=Genbank:WP_012176115.1;Name=WP_012176115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070696.1;locus_tag=DOLE_RS13880;product=cation-transporting P-type ATPase;protein_id=WP_012176115.1;transl_table=11 NC_009943.1 RefSeq gene 3260130 3261524 . - . ID=gene-DOLE_RS13885;Name=DOLE_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13885;old_locus_tag=Dole_2702 NC_009943.1 Protein Homology CDS 3260130 3261524 . - 0 ID=cds-WP_153304439.1;Parent=gene-DOLE_RS13885;Dbxref=Genbank:WP_153304439.1;Name=WP_153304439.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.2;locus_tag=DOLE_RS13885;product=glycosyltransferase family 39 protein;protein_id=WP_153304439.1;transl_table=11 NC_009943.1 RefSeq gene 3262117 3262782 . + . ID=gene-DOLE_RS13890;Name=DOLE_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13890;old_locus_tag=Dole_2703 NC_009943.1 GeneMarkS-2+ CDS 3262117 3262782 . + 0 ID=cds-WP_012176117.1;Parent=gene-DOLE_RS13890;Dbxref=Genbank:WP_012176117.1;Name=WP_012176117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13890;product=hypothetical protein;protein_id=WP_012176117.1;transl_table=11 NC_009943.1 RefSeq gene 3262819 3265059 . + . ID=gene-DOLE_RS17590;Name=DOLE_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17590;old_locus_tag=Dole_2704 NC_009943.1 Protein Homology CDS 3262819 3265059 . + 0 ID=cds-WP_012176118.1;Parent=gene-DOLE_RS17590;Dbxref=Genbank:WP_012176118.1;Name=WP_012176118.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020811.2;locus_tag=DOLE_RS17590;product=bifunctional DNA primase/polymerase;protein_id=WP_012176118.1;transl_table=11 NC_009943.1 RefSeq gene 3265375 3265902 . - . ID=gene-DOLE_RS13900;Name=DOLE_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13900;old_locus_tag=Dole_2705 NC_009943.1 GeneMarkS-2+ CDS 3265375 3265902 . - 0 ID=cds-WP_012176119.1;Parent=gene-DOLE_RS13900;Dbxref=Genbank:WP_012176119.1;Name=WP_012176119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13900;product=hypothetical protein;protein_id=WP_012176119.1;transl_table=11 NC_009943.1 RefSeq gene 3265928 3266443 . - . ID=gene-DOLE_RS13905;Name=DOLE_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13905;old_locus_tag=Dole_2706 NC_009943.1 GeneMarkS-2+ CDS 3265928 3266443 . - 0 ID=cds-WP_012176120.1;Parent=gene-DOLE_RS13905;Dbxref=Genbank:WP_012176120.1;Name=WP_012176120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13905;product=hypothetical protein;protein_id=WP_012176120.1;transl_table=11 NC_009943.1 RefSeq gene 3266440 3266604 . - . ID=gene-DOLE_RS18275;Name=DOLE_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18275 NC_009943.1 GeneMarkS-2+ CDS 3266440 3266604 . - 0 ID=cds-WP_153304440.1;Parent=gene-DOLE_RS18275;Dbxref=Genbank:WP_153304440.1;Name=WP_153304440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18275;product=hypothetical protein;protein_id=WP_153304440.1;transl_table=11 NC_009943.1 RefSeq gene 3266606 3267139 . - . ID=gene-DOLE_RS13910;Name=DOLE_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13910;old_locus_tag=Dole_2707 NC_009943.1 GeneMarkS-2+ CDS 3266606 3267139 . - 0 ID=cds-WP_012176121.1;Parent=gene-DOLE_RS13910;Dbxref=Genbank:WP_012176121.1;Name=WP_012176121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13910;product=hypothetical protein;protein_id=WP_012176121.1;transl_table=11 NC_009943.1 RefSeq gene 3267150 3267467 . - . ID=gene-DOLE_RS13915;Name=DOLE_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13915 NC_009943.1 Protein Homology CDS 3267150 3267467 . - 0 ID=cds-WP_041280587.1;Parent=gene-DOLE_RS13915;Dbxref=Genbank:WP_041280587.1;Name=WP_041280587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967514.1;locus_tag=DOLE_RS13915;product=DUF2958 domain-containing protein;protein_id=WP_041280587.1;transl_table=11 NC_009943.1 RefSeq gene 3267778 3268410 . - . ID=gene-DOLE_RS13925;Name=DOLE_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13925;old_locus_tag=Dole_2709 NC_009943.1 Protein Homology CDS 3267778 3268410 . - 0 ID=cds-WP_012176123.1;Parent=gene-DOLE_RS13925;Dbxref=Genbank:WP_012176123.1;Name=WP_012176123.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967516.1;locus_tag=DOLE_RS13925;product=tyrosine-type recombinase/integrase;protein_id=WP_012176123.1;transl_table=11 NC_009943.1 RefSeq gene 3268768 3269823 . - . ID=gene-DOLE_RS18280;Name=DOLE_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18280;old_locus_tag=Dole_2710 NC_009943.1 GeneMarkS-2+ CDS 3268768 3269823 . - 0 ID=cds-WP_012176124.1;Parent=gene-DOLE_RS18280;Dbxref=Genbank:WP_012176124.1;Name=WP_012176124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18280;product=hypothetical protein;protein_id=WP_012176124.1;transl_table=11 NC_009943.1 RefSeq gene 3270159 3270497 . - . ID=gene-DOLE_RS13930;Name=DOLE_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13930;old_locus_tag=Dole_2711 NC_009943.1 Protein Homology CDS 3270159 3270497 . - 0 ID=cds-WP_012176125.1;Parent=gene-DOLE_RS13930;Dbxref=Genbank:WP_012176125.1;Name=WP_012176125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967504.1;locus_tag=DOLE_RS13930;product=helix-turn-helix transcriptional regulator;protein_id=WP_012176125.1;transl_table=11 NC_009943.1 RefSeq gene 3270688 3270957 . + . ID=gene-DOLE_RS13935;Name=DOLE_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13935;old_locus_tag=Dole_2712 NC_009943.1 GeneMarkS-2+ CDS 3270688 3270957 . + 0 ID=cds-WP_041280588.1;Parent=gene-DOLE_RS13935;Dbxref=Genbank:WP_041280588.1;Name=WP_041280588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13935;product=hypothetical protein;protein_id=WP_041280588.1;transl_table=11 NC_009943.1 RefSeq gene 3271028 3272623 . + . ID=gene-DOLE_RS13940;Name=DOLE_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13940;old_locus_tag=Dole_2713 NC_009943.1 GeneMarkS-2+ CDS 3271028 3272623 . + 0 ID=cds-WP_012176127.1;Parent=gene-DOLE_RS13940;Dbxref=Genbank:WP_012176127.1;Name=WP_012176127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13940;product=hypothetical protein;protein_id=WP_012176127.1;transl_table=11 NC_009943.1 RefSeq gene 3272746 3273123 . - . ID=gene-DOLE_RS13945;Name=DOLE_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13945;old_locus_tag=Dole_2714 NC_009943.1 Protein Homology CDS 3272746 3273123 . - 0 ID=cds-WP_041280589.1;Parent=gene-DOLE_RS13945;Dbxref=Genbank:WP_041280589.1;Name=WP_041280589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176286.1;locus_tag=DOLE_RS13945;product=hypothetical protein;protein_id=WP_041280589.1;transl_table=11 NC_009943.1 RefSeq gene 3273376 3274812 . + . ID=gene-DOLE_RS17595;Name=DOLE_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17595;old_locus_tag=Dole_2715 NC_009943.1 GeneMarkS-2+ CDS 3273376 3274812 . + 0 ID=cds-WP_012176129.1;Parent=gene-DOLE_RS17595;Dbxref=Genbank:WP_012176129.1;Name=WP_012176129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17595;product=hypothetical protein;protein_id=WP_012176129.1;transl_table=11 NC_009943.1 RefSeq gene 3275210 3275848 . + . ID=gene-DOLE_RS17600;Name=DOLE_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17600;old_locus_tag=Dole_2716 NC_009943.1 Protein Homology CDS 3275210 3275848 . + 0 ID=cds-WP_012176130.1;Parent=gene-DOLE_RS17600;Dbxref=Genbank:WP_012176130.1;Name=WP_012176130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176130.1;locus_tag=DOLE_RS17600;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012176130.1;transl_table=11 NC_009943.1 RefSeq gene 3276140 3276832 . + . ID=gene-DOLE_RS13960;Name=DOLE_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13960;old_locus_tag=Dole_2717 NC_009943.1 GeneMarkS-2+ CDS 3276140 3276832 . + 0 ID=cds-WP_041280590.1;Parent=gene-DOLE_RS13960;Dbxref=Genbank:WP_041280590.1;Name=WP_041280590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13960;product=hypothetical protein;protein_id=WP_041280590.1;transl_table=11 NC_009943.1 RefSeq gene 3277263 3278027 . + . ID=gene-DOLE_RS13965;Name=DOLE_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13965;old_locus_tag=Dole_2718 NC_009943.1 Protein Homology CDS 3277263 3278027 . + 0 ID=cds-WP_012176132.1;Parent=gene-DOLE_RS13965;Dbxref=Genbank:WP_012176132.1;Name=WP_012176132.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=DOLE_RS13965;product=tetratricopeptide repeat protein;protein_id=WP_012176132.1;transl_table=11 NC_009943.1 RefSeq gene 3278049 3278327 . + . ID=gene-DOLE_RS13970;Name=DOLE_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13970 NC_009943.1 GeneMarkS-2+ CDS 3278049 3278327 . + 0 ID=cds-WP_041280591.1;Parent=gene-DOLE_RS13970;Dbxref=Genbank:WP_041280591.1;Name=WP_041280591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13970;product=hypothetical protein;protein_id=WP_041280591.1;transl_table=11 NC_009943.1 RefSeq gene 3278371 3278652 . + . ID=gene-DOLE_RS18285;Name=DOLE_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18285 NC_009943.1 GeneMarkS-2+ CDS 3278371 3278652 . + 0 ID=cds-WP_153304441.1;Parent=gene-DOLE_RS18285;Dbxref=Genbank:WP_153304441.1;Name=WP_153304441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18285;product=hypothetical protein;protein_id=WP_153304441.1;transl_table=11 NC_009943.1 RefSeq gene 3279237 3280196 . - . ID=gene-DOLE_RS13980;Name=DOLE_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13980;old_locus_tag=Dole_2719 NC_009943.1 Protein Homology CDS 3279237 3280196 . - 0 ID=cds-WP_012176133.1;Parent=gene-DOLE_RS13980;Dbxref=Genbank:WP_012176133.1;Name=WP_012176133.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016887.2;locus_tag=DOLE_RS13980;product=hypothetical protein;protein_id=WP_012176133.1;transl_table=11 NC_009943.1 RefSeq gene 3280197 3281297 . - . ID=gene-DOLE_RS18520;Name=DOLE_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18520;old_locus_tag=Dole_2720 NC_009943.1 GeneMarkS-2+ CDS 3280197 3281297 . - 0 ID=cds-WP_012176134.1;Parent=gene-DOLE_RS18520;Dbxref=Genbank:WP_012176134.1;Name=WP_012176134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18520;product=hypothetical protein;protein_id=WP_012176134.1;transl_table=11 NC_009943.1 RefSeq gene 3281813 3282268 . + . ID=gene-DOLE_RS13990;Name=DOLE_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13990;old_locus_tag=Dole_2721 NC_009943.1 Protein Homology CDS 3281813 3282268 . + 0 ID=cds-WP_012176135.1;Parent=gene-DOLE_RS13990;Dbxref=Genbank:WP_012176135.1;Name=WP_012176135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176349.1;locus_tag=DOLE_RS13990;product=putative molybdenum carrier protein;protein_id=WP_012176135.1;transl_table=11 NC_009943.1 RefSeq gene 3282424 3283032 . + . ID=gene-DOLE_RS13995;Name=DOLE_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS13995;old_locus_tag=Dole_2722 NC_009943.1 GeneMarkS-2+ CDS 3282424 3283032 . + 0 ID=cds-WP_041280593.1;Parent=gene-DOLE_RS13995;Dbxref=Genbank:WP_041280593.1;Name=WP_041280593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS13995;product=hypothetical protein;protein_id=WP_041280593.1;transl_table=11 NC_009943.1 RefSeq gene 3283115 3283396 . - . ID=gene-DOLE_RS14000;Name=DOLE_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14000;old_locus_tag=Dole_2723 NC_009943.1 GeneMarkS-2+ CDS 3283115 3283396 . - 0 ID=cds-WP_012176137.1;Parent=gene-DOLE_RS14000;Dbxref=Genbank:WP_012176137.1;Name=WP_012176137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14000;product=hypothetical protein;protein_id=WP_012176137.1;transl_table=11 NC_009943.1 RefSeq gene 3284305 3287115 . + . ID=gene-DOLE_RS14005;Name=DOLE_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14005;old_locus_tag=Dole_2724 NC_009943.1 Protein Homology CDS 3284305 3287115 . + 0 ID=cds-WP_012176138.1;Parent=gene-DOLE_RS14005;Dbxref=Genbank:WP_012176138.1;Name=WP_012176138.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967731.1;locus_tag=DOLE_RS14005;product=DEAD/DEAH box helicase family protein;protein_id=WP_012176138.1;transl_table=11 NC_009943.1 RefSeq gene 3287159 3288823 . + . ID=gene-DOLE_RS14010;Name=DOLE_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14010;old_locus_tag=Dole_2725 NC_009943.1 Protein Homology CDS 3287159 3288823 . + 0 ID=cds-WP_012176139.1;Parent=gene-DOLE_RS14010;Dbxref=Genbank:WP_012176139.1;Name=WP_012176139.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014955706.1;locus_tag=DOLE_RS14010;product=type I restriction-modification system subunit M;protein_id=WP_012176139.1;transl_table=11 NC_009943.1 RefSeq gene 3288820 3290322 . + . ID=gene-DOLE_RS14015;Name=DOLE_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14015;old_locus_tag=Dole_2726 NC_009943.1 Protein Homology CDS 3288820 3290322 . + 0 ID=cds-WP_012176140.1;Parent=gene-DOLE_RS14015;Dbxref=Genbank:WP_012176140.1;Name=WP_012176140.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=DOLE_RS14015;product=restriction endonuclease subunit S;protein_id=WP_012176140.1;transl_table=11 NC_009943.1 RefSeq gene 3290335 3292140 . + . ID=gene-DOLE_RS14020;Name=DOLE_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14020;old_locus_tag=Dole_2727 NC_009943.1 Protein Homology CDS 3290335 3292140 . + 0 ID=cds-WP_012176141.1;Parent=gene-DOLE_RS14020;Dbxref=Genbank:WP_012176141.1;Name=WP_012176141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014955708.1;locus_tag=DOLE_RS14020;product=restriction system-associated AAA family ATPase;protein_id=WP_012176141.1;transl_table=11 NC_009943.1 RefSeq gene 3292140 3293225 . + . ID=gene-DOLE_RS14025;Name=DOLE_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14025;old_locus_tag=Dole_2728 NC_009943.1 GeneMarkS-2+ CDS 3292140 3293225 . + 0 ID=cds-WP_012176142.1;Parent=gene-DOLE_RS14025;Dbxref=Genbank:WP_012176142.1;Name=WP_012176142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14025;product=hypothetical protein;protein_id=WP_012176142.1;transl_table=11 NC_009943.1 RefSeq gene 3293339 3294010 . - . ID=gene-DOLE_RS14030;Name=DOLE_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14030;old_locus_tag=Dole_2729 NC_009943.1 Protein Homology CDS 3293339 3294010 . - 0 ID=cds-WP_052294309.1;Parent=gene-DOLE_RS14030;Dbxref=Genbank:WP_052294309.1;Name=WP_052294309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968784.1;locus_tag=DOLE_RS14030;product=ribonuclease H family protein;protein_id=WP_052294309.1;transl_table=11 NC_009943.1 RefSeq gene 3294063 3294638 . - . ID=gene-DOLE_RS18290;Name=DOLE_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18290 NC_009943.1 GeneMarkS-2+ CDS 3294063 3294638 . - 0 ID=cds-WP_153304442.1;Parent=gene-DOLE_RS18290;Dbxref=Genbank:WP_153304442.1;Name=WP_153304442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18290;product=hypothetical protein;protein_id=WP_153304442.1;transl_table=11 NC_009943.1 RefSeq gene 3294871 3295128 . - . ID=gene-DOLE_RS18295;Name=DOLE_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18295;old_locus_tag=Dole_2730 NC_009943.1 GeneMarkS-2+ CDS 3294871 3295128 . - 0 ID=cds-WP_012176144.1;Parent=gene-DOLE_RS18295;Dbxref=Genbank:WP_012176144.1;Name=WP_012176144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18295;product=hypothetical protein;protein_id=WP_012176144.1;transl_table=11 NC_009943.1 RefSeq gene 3295143 3295883 . - . ID=gene-DOLE_RS14035;Name=DOLE_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14035;old_locus_tag=Dole_2731 NC_009943.1 GeneMarkS-2+ CDS 3295143 3295883 . - 0 ID=cds-WP_041280594.1;Parent=gene-DOLE_RS14035;Dbxref=Genbank:WP_041280594.1;Name=WP_041280594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14035;product=hypothetical protein;protein_id=WP_041280594.1;transl_table=11 NC_009943.1 RefSeq gene 3296015 3296989 . - . ID=gene-DOLE_RS14040;Name=DOLE_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14040;old_locus_tag=Dole_2732 NC_009943.1 GeneMarkS-2+ CDS 3296015 3296989 . - 0 ID=cds-WP_012176146.1;Parent=gene-DOLE_RS14040;Dbxref=Genbank:WP_012176146.1;Name=WP_012176146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14040;product=hypothetical protein;protein_id=WP_012176146.1;transl_table=11 NC_009943.1 RefSeq gene 3297652 3298158 . + . ID=gene-DOLE_RS14045;Name=DOLE_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14045 NC_009943.1 GeneMarkS-2+ CDS 3297652 3298158 . + 0 ID=cds-WP_041280595.1;Parent=gene-DOLE_RS14045;Dbxref=Genbank:WP_041280595.1;Name=WP_041280595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14045;product=hypothetical protein;protein_id=WP_041280595.1;transl_table=11 NC_009943.1 RefSeq gene 3299028 3299780 . + . ID=gene-DOLE_RS14050;Name=DOLE_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14050;old_locus_tag=Dole_2733 NC_009943.1 GeneMarkS-2+ CDS 3299028 3299780 . + 0 ID=cds-WP_012176147.1;Parent=gene-DOLE_RS14050;Dbxref=Genbank:WP_012176147.1;Name=WP_012176147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14050;product=hypothetical protein;protein_id=WP_012176147.1;transl_table=11 NC_009943.1 RefSeq gene 3300371 3301465 . + . ID=gene-DOLE_RS14055;Name=DOLE_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14055;old_locus_tag=Dole_2734 NC_009943.1 Protein Homology CDS 3300371 3301465 . + 0 ID=cds-WP_012176148.1;Parent=gene-DOLE_RS14055;Dbxref=Genbank:WP_012176148.1;Name=WP_012176148.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=DOLE_RS14055;product=tyrosine-type recombinase/integrase;protein_id=WP_012176148.1;transl_table=11 NC_009943.1 RefSeq gene 3301470 3301544 . - . ID=gene-DOLE_RS14060;Name=DOLE_RS14060;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS14060;old_locus_tag=Dole_R0044 NC_009943.1 tRNAscan-SE tRNA 3301470 3301544 . - . ID=rna-DOLE_RS14060;Parent=gene-DOLE_RS14060;anticodon=(pos:complement(3301509..3301511));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS14060;product=tRNA-Glu NC_009943.1 tRNAscan-SE exon 3301470 3301544 . - . ID=exon-DOLE_RS14060-1;Parent=rna-DOLE_RS14060;anticodon=(pos:complement(3301509..3301511));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS14060;product=tRNA-Glu NC_009943.1 RefSeq gene 3301659 3303191 . - . ID=gene-DOLE_RS14065;Name=DOLE_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14065;old_locus_tag=Dole_2735 NC_009943.1 Protein Homology CDS 3301659 3303191 . - 0 ID=cds-WP_012176149.1;Parent=gene-DOLE_RS14065;Dbxref=Genbank:WP_012176149.1;Name=WP_012176149.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877017.1;locus_tag=DOLE_RS14065;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_012176149.1;transl_table=11 NC_009943.1 RefSeq gene 3303452 3304345 . + . ID=gene-DOLE_RS14070;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=DOLE_RS14070;old_locus_tag=Dole_2736 NC_009943.1 Protein Homology CDS 3303452 3304345 . + 0 ID=cds-WP_012176150.1;Parent=gene-DOLE_RS14070;Dbxref=Genbank:WP_012176150.1;Name=WP_012176150.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956132.1;locus_tag=DOLE_RS14070;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_012176150.1;transl_table=11 NC_009943.1 RefSeq gene 3304603 3305175 . + . ID=gene-DOLE_RS14075;Name=DOLE_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14075;old_locus_tag=Dole_2737 NC_009943.1 Protein Homology CDS 3304603 3305175 . + 0 ID=cds-WP_012176151.1;Parent=gene-DOLE_RS14075;Dbxref=Genbank:WP_012176151.1;Name=WP_012176151.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025692.2;locus_tag=DOLE_RS14075;product=DUF4390 domain-containing protein;protein_id=WP_012176151.1;transl_table=11 NC_009943.1 RefSeq gene 3305237 3307486 . + . ID=gene-DOLE_RS14080;Name=DOLE_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14080;old_locus_tag=Dole_2738 NC_009943.1 Protein Homology CDS 3305237 3307486 . + 0 ID=cds-WP_012176152.1;Parent=gene-DOLE_RS14080;Dbxref=Genbank:WP_012176152.1;Name=WP_012176152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877014.1;locus_tag=DOLE_RS14080;product=ATP-binding protein;protein_id=WP_012176152.1;transl_table=11 NC_009943.1 RefSeq gene 3307518 3308873 . + . ID=gene-DOLE_RS14085;Name=DOLE_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14085;old_locus_tag=Dole_2739 NC_009943.1 Protein Homology CDS 3307518 3308873 . + 0 ID=cds-WP_012176153.1;Parent=gene-DOLE_RS14085;Dbxref=Genbank:WP_012176153.1;Name=WP_012176153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723681.1;locus_tag=DOLE_RS14085;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012176153.1;transl_table=11 NC_009943.1 RefSeq gene 3308879 3309502 . + . ID=gene-DOLE_RS14090;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=DOLE_RS14090;old_locus_tag=Dole_2740 NC_009943.1 Protein Homology CDS 3308879 3309502 . + 0 ID=cds-WP_012176154.1;Parent=gene-DOLE_RS14090;Dbxref=Genbank:WP_012176154.1;Name=WP_012176154.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: protein motif:HMM:TIGR00095.1;locus_tag=DOLE_RS14090;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_012176154.1;transl_table=11 NC_009943.1 RefSeq gene 3309536 3310042 . + . ID=gene-DOLE_RS14095;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=DOLE_RS14095;old_locus_tag=Dole_2741 NC_009943.1 Protein Homology CDS 3309536 3310042 . + 0 ID=cds-WP_012176155.1;Parent=gene-DOLE_RS14095;Dbxref=Genbank:WP_012176155.1;Name=WP_012176155.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176155.1;locus_tag=DOLE_RS14095;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_012176155.1;transl_table=11 NC_009943.1 RefSeq gene 3310039 3310704 . - . ID=gene-DOLE_RS14100;Name=DOLE_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14100;old_locus_tag=Dole_2742 NC_009943.1 Protein Homology CDS 3310039 3310704 . - 0 ID=cds-WP_012176156.1;Parent=gene-DOLE_RS14100;Dbxref=Genbank:WP_012176156.1;Name=WP_012176156.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176156.1;locus_tag=DOLE_RS14100;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_012176156.1;transl_table=11 NC_009943.1 RefSeq gene 3310928 3311929 . + . ID=gene-DOLE_RS14105;Name=DOLE_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14105;old_locus_tag=Dole_2743 NC_009943.1 Protein Homology CDS 3310928 3311929 . + 0 ID=cds-WP_012176157.1;Parent=gene-DOLE_RS14105;Dbxref=Genbank:WP_012176157.1;Name=WP_012176157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877007.1;locus_tag=DOLE_RS14105;product=potassium channel protein;protein_id=WP_012176157.1;transl_table=11 NC_009943.1 RefSeq gene 3312037 3312624 . - . ID=gene-DOLE_RS14110;Name=DOLE_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14110;old_locus_tag=Dole_2744 NC_009943.1 Protein Homology CDS 3312037 3312624 . - 0 ID=cds-WP_012176158.1;Parent=gene-DOLE_RS14110;Dbxref=Genbank:WP_012176158.1;Name=WP_012176158.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: protein motif:HMM:NF013934.2;locus_tag=DOLE_RS14110;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_012176158.1;transl_table=11 NC_009943.1 RefSeq gene 3312836 3314113 . + . ID=gene-DOLE_RS14115;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=DOLE_RS14115;old_locus_tag=Dole_2745 NC_009943.1 Protein Homology CDS 3312836 3314113 . + 0 ID=cds-WP_012176159.1;Parent=gene-DOLE_RS14115;Dbxref=Genbank:WP_012176159.1;Name=WP_012176159.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176159.1;locus_tag=DOLE_RS14115;product=serine--tRNA ligase;protein_id=WP_012176159.1;transl_table=11 NC_009943.1 RefSeq gene 3314110 3315615 . + . ID=gene-DOLE_RS14120;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=DOLE_RS14120;old_locus_tag=Dole_2746 NC_009943.1 Protein Homology CDS 3314110 3315615 . + 0 ID=cds-WP_012176160.1;Parent=gene-DOLE_RS14120;Dbxref=Genbank:WP_012176160.1;Name=WP_012176160.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949122.1;locus_tag=DOLE_RS14120;product=threonine synthase;protein_id=WP_012176160.1;transl_table=11 NC_009943.1 RefSeq gene 3315612 3316358 . + . ID=gene-DOLE_RS14125;Name=DOLE_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14125;old_locus_tag=Dole_2747 NC_009943.1 Protein Homology CDS 3315612 3316358 . + 0 ID=cds-WP_012176161.1;Parent=gene-DOLE_RS14125;Dbxref=Genbank:WP_012176161.1;Name=WP_012176161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=DOLE_RS14125;product=tetratricopeptide repeat protein;protein_id=WP_012176161.1;transl_table=11 NC_009943.1 RefSeq gene 3316539 3317201 . - . ID=gene-DOLE_RS14130;Name=DOLE_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14130;old_locus_tag=Dole_2748 NC_009943.1 Protein Homology CDS 3316539 3317201 . - 0 ID=cds-WP_012176162.1;Parent=gene-DOLE_RS14130;Dbxref=Genbank:WP_012176162.1;Name=WP_012176162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=DOLE_RS14130;product=CPBP family intramembrane metalloprotease;protein_id=WP_012176162.1;transl_table=11 NC_009943.1 RefSeq gene 3317281 3318297 . - . ID=gene-DOLE_RS14135;Name=DOLE_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14135;old_locus_tag=Dole_2749 NC_009943.1 Protein Homology CDS 3317281 3318297 . - 0 ID=cds-WP_012176163.1;Parent=gene-DOLE_RS14135;Dbxref=Genbank:WP_012176163.1;Name=WP_012176163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019121.2;locus_tag=DOLE_RS14135;product=D-alanine--D-alanine ligase;protein_id=WP_012176163.1;transl_table=11 NC_009943.1 RefSeq gene 3318514 3318843 . - . ID=gene-DOLE_RS18045;Name=DOLE_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18045;old_locus_tag=Dole_2750 NC_009943.1 Protein Homology CDS 3318514 3318843 . - 0 ID=cds-WP_012176164.1;Parent=gene-DOLE_RS18045;Dbxref=Genbank:WP_012176164.1;Name=WP_012176164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586081.1;locus_tag=DOLE_RS18045;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_012176164.1;transl_table=11 NC_009943.1 RefSeq gene 3319575 3319871 . - . ID=gene-DOLE_RS14140;Name=DOLE_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14140;old_locus_tag=Dole_2752 NC_009943.1 Protein Homology CDS 3319575 3319871 . - 0 ID=cds-WP_012176166.1;Parent=gene-DOLE_RS14140;Dbxref=Genbank:WP_012176166.1;Name=WP_012176166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163245.1;locus_tag=DOLE_RS14140;product=antitoxin;protein_id=WP_012176166.1;transl_table=11 NC_009943.1 RefSeq gene 3319868 3320140 . - . ID=gene-DOLE_RS14145;Name=DOLE_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14145;old_locus_tag=Dole_2753 NC_009943.1 GeneMarkS-2+ CDS 3319868 3320140 . - 0 ID=cds-WP_012176167.1;Parent=gene-DOLE_RS14145;Dbxref=Genbank:WP_012176167.1;Name=WP_012176167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14145;product=toxin;protein_id=WP_012176167.1;transl_table=11 NC_009943.1 RefSeq gene 3320556 3321383 . - . ID=gene-DOLE_RS14150;Name=DOLE_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14150;old_locus_tag=Dole_2754 NC_009943.1 Protein Homology CDS 3320556 3321383 . - 0 ID=cds-WP_012176168.1;Parent=gene-DOLE_RS14150;Dbxref=Genbank:WP_012176168.1;Name=WP_012176168.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=DOLE_RS14150;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_012176168.1;transl_table=11 NC_009943.1 RefSeq gene 3321382 3321576 . + . ID=gene-DOLE_RS18300;Name=DOLE_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18300 NC_009943.1 GeneMarkS-2+ CDS 3321382 3321576 . + 0 ID=cds-WP_153304443.1;Parent=gene-DOLE_RS18300;Dbxref=Genbank:WP_153304443.1;Name=WP_153304443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18300;product=hypothetical protein;protein_id=WP_153304443.1;transl_table=11 NC_009943.1 RefSeq gene 3321610 3324300 . + . ID=gene-DOLE_RS14160;Name=DOLE_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14160;old_locus_tag=Dole_2755 NC_009943.1 Protein Homology CDS 3321610 3324300 . + 0 ID=cds-WP_012176169.1;Parent=gene-DOLE_RS14160;Dbxref=Genbank:WP_012176169.1;Name=WP_012176169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877070.1;locus_tag=DOLE_RS14160;product=CBS domain-containing protein;protein_id=WP_012176169.1;transl_table=11 NC_009943.1 RefSeq gene 3324311 3324535 . + . ID=gene-DOLE_RS18305;Name=DOLE_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18305 NC_009943.1 GeneMarkS-2+ CDS 3324311 3324535 . + 0 ID=cds-WP_153304445.1;Parent=gene-DOLE_RS18305;Dbxref=Genbank:WP_153304445.1;Name=WP_153304445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18305;product=hypothetical protein;protein_id=WP_153304445.1;transl_table=11 NC_009943.1 RefSeq gene 3324679 3325377 . + . ID=gene-DOLE_RS18525;Name=DOLE_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18525;old_locus_tag=Dole_2756 NC_009943.1 GeneMarkS-2+ CDS 3324679 3325377 . + 0 ID=cds-WP_012176170.1;Parent=gene-DOLE_RS18525;Dbxref=Genbank:WP_012176170.1;Name=WP_012176170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18525;product=site-2 protease family protein;protein_id=WP_012176170.1;transl_table=11 NC_009943.1 RefSeq gene 3325403 3326392 . + . ID=gene-DOLE_RS14170;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=DOLE_RS14170;old_locus_tag=Dole_2757 NC_009943.1 Protein Homology CDS 3325403 3326392 . + 0 ID=cds-WP_012176171.1;Parent=gene-DOLE_RS14170;Dbxref=Genbank:WP_012176171.1;Name=WP_012176171.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877928.1;locus_tag=DOLE_RS14170;product=tryptophan--tRNA ligase;protein_id=WP_012176171.1;transl_table=11 NC_009943.1 RefSeq gene 3326389 3327135 . + . ID=gene-DOLE_RS14175;Name=DOLE_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14175;old_locus_tag=Dole_2758 NC_009943.1 Protein Homology CDS 3326389 3327135 . + 0 ID=cds-WP_012176172.1;Parent=gene-DOLE_RS14175;Dbxref=Genbank:WP_012176172.1;Name=WP_012176172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949930.1;locus_tag=DOLE_RS14175;product=segregation/condensation protein A;protein_id=WP_012176172.1;transl_table=11 NC_009943.1 RefSeq gene 3327132 3328031 . + . ID=gene-DOLE_RS18055;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=DOLE_RS18055;old_locus_tag=Dole_2759 NC_009943.1 Protein Homology CDS 3327132 3328031 . + 0 ID=cds-WP_012176173.1;Parent=gene-DOLE_RS18055;Dbxref=Genbank:WP_012176173.1;Name=WP_012176173.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: protein motif:HMM:TIGR00281.1;locus_tag=DOLE_RS18055;product=SMC-Scp complex subunit ScpB;protein_id=WP_012176173.1;transl_table=11 NC_009943.1 RefSeq gene 3328138 3328212 . + . ID=gene-DOLE_RS14185;Name=DOLE_RS14185;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS14185;old_locus_tag=Dole_R0045 NC_009943.1 tRNAscan-SE tRNA 3328138 3328212 . + . ID=rna-DOLE_RS14185;Parent=gene-DOLE_RS14185;anticodon=(pos:3328170..3328172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS14185;product=tRNA-Val NC_009943.1 tRNAscan-SE exon 3328138 3328212 . + . ID=exon-DOLE_RS14185-1;Parent=rna-DOLE_RS14185;anticodon=(pos:3328170..3328172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS14185;product=tRNA-Val NC_009943.1 RefSeq gene 3328268 3328792 . + . ID=gene-DOLE_RS14190;Name=DOLE_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14190;old_locus_tag=Dole_2760 NC_009943.1 Protein Homology CDS 3328268 3328792 . + 0 ID=cds-WP_012176174.1;Parent=gene-DOLE_RS14190;Dbxref=Genbank:WP_012176174.1;Name=WP_012176174.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012257.2;locus_tag=DOLE_RS14190;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_012176174.1;transl_table=11 NC_009943.1 RefSeq gene 3328834 3329868 . + . ID=gene-DOLE_RS14195;Name=DOLE_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14195;old_locus_tag=Dole_2761 NC_009943.1 Protein Homology CDS 3328834 3329868 . + 0 ID=cds-WP_232362713.1;Parent=gene-DOLE_RS14195;Dbxref=Genbank:WP_232362713.1;Name=WP_232362713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610086.1;locus_tag=DOLE_RS14195;product=radical SAM protein;protein_id=WP_232362713.1;transl_table=11 NC_009943.1 RefSeq gene 3330001 3331224 . - . ID=gene-DOLE_RS14200;Name=DOLE_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14200;old_locus_tag=Dole_2762 NC_009943.1 Protein Homology CDS 3330001 3331224 . - 0 ID=cds-WP_012176176.1;Parent=gene-DOLE_RS14200;Dbxref=Genbank:WP_012176176.1;Name=WP_012176176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163282.1;locus_tag=DOLE_RS14200;product=hypothetical protein;protein_id=WP_012176176.1;transl_table=11 NC_009943.1 RefSeq gene 3331280 3332134 . - . ID=gene-DOLE_RS14205;Name=DOLE_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14205;old_locus_tag=Dole_2763 NC_009943.1 Protein Homology CDS 3331280 3332134 . - 0 ID=cds-WP_012176177.1;Parent=gene-DOLE_RS14205;Dbxref=Genbank:WP_012176177.1;Name=WP_012176177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015995.2;locus_tag=DOLE_RS14205;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_012176177.1;transl_table=11 NC_009943.1 RefSeq gene 3332247 3333083 . - . ID=gene-DOLE_RS14210;Name=DOLE_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14210;old_locus_tag=Dole_2764 NC_009943.1 Protein Homology CDS 3332247 3333083 . - 0 ID=cds-WP_012176178.1;Parent=gene-DOLE_RS14210;Dbxref=Genbank:WP_012176178.1;Name=WP_012176178.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=DOLE_RS14210;product=proline/glycine betaine ABC transporter permease;protein_id=WP_012176178.1;transl_table=11 NC_009943.1 RefSeq gene 3333076 3334275 . - . ID=gene-DOLE_RS14215;Name=DOLE_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14215;old_locus_tag=Dole_2765 NC_009943.1 Protein Homology CDS 3333076 3334275 . - 0 ID=cds-WP_012176179.1;Parent=gene-DOLE_RS14215;Dbxref=Genbank:WP_012176179.1;Name=WP_012176179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011187451.1;locus_tag=DOLE_RS14215;product=glycine betaine/L-proline ABC transporter ATP-binding protein;protein_id=WP_012176179.1;transl_table=11 NC_009943.1 RefSeq gene 3334858 3338178 . - . ID=gene-DOLE_RS14220;Name=DOLE_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14220;old_locus_tag=Dole_2766 NC_009943.1 Protein Homology CDS 3334858 3338178 . - 0 ID=cds-WP_012176180.1;Parent=gene-DOLE_RS14220;Dbxref=Genbank:WP_012176180.1;Name=WP_012176180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016906.2;locus_tag=DOLE_RS14220;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_012176180.1;transl_table=11 NC_009943.1 RefSeq gene 3338733 3339518 . + . ID=gene-DOLE_RS17610;Name=DOLE_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17610;old_locus_tag=Dole_2767 NC_009943.1 Protein Homology CDS 3338733 3339518 . + 0 ID=cds-WP_012176181.1;Parent=gene-DOLE_RS17610;Dbxref=Genbank:WP_012176181.1;Name=WP_012176181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019349.2;locus_tag=DOLE_RS17610;product=GntR family transcriptional regulator;protein_id=WP_012176181.1;transl_table=11 NC_009943.1 RefSeq gene 3339515 3340978 . + . ID=gene-DOLE_RS14235;Name=DOLE_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14235;old_locus_tag=Dole_2768 NC_009943.1 GeneMarkS-2+ CDS 3339515 3340978 . + 0 ID=cds-WP_012176182.1;Parent=gene-DOLE_RS14235;Dbxref=Genbank:WP_012176182.1;Name=WP_012176182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14235;product=hypothetical protein;protein_id=WP_012176182.1;transl_table=11 NC_009943.1 RefSeq gene 3340980 3342119 . + . ID=gene-DOLE_RS14240;Name=DOLE_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14240;old_locus_tag=Dole_2769 NC_009943.1 Protein Homology CDS 3340980 3342119 . + 0 ID=cds-WP_012176183.1;Parent=gene-DOLE_RS14240;Dbxref=Genbank:WP_012176183.1;Name=WP_012176183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949607.1;locus_tag=DOLE_RS14240;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012176183.1;transl_table=11 NC_009943.1 RefSeq gene 3342147 3343547 . + . ID=gene-DOLE_RS14245;Name=DOLE_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14245;old_locus_tag=Dole_2770 NC_009943.1 Protein Homology CDS 3342147 3343547 . + 0 ID=cds-WP_012176184.1;Parent=gene-DOLE_RS14245;Dbxref=Genbank:WP_012176184.1;Name=WP_012176184.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017828.2;locus_tag=DOLE_RS14245;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012176184.1;transl_table=11 NC_009943.1 RefSeq gene 3343544 3344347 . + . ID=gene-DOLE_RS14250;Name=DOLE_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14250;old_locus_tag=Dole_2771 NC_009943.1 Protein Homology CDS 3343544 3344347 . + 0 ID=cds-WP_012176185.1;Parent=gene-DOLE_RS14250;Dbxref=Genbank:WP_012176185.1;Name=WP_012176185.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949610.1;locus_tag=DOLE_RS14250;product=acyl-CoA dehydratase activase;protein_id=WP_012176185.1;transl_table=11 NC_009943.1 RefSeq gene 3344344 3345126 . + . ID=gene-DOLE_RS14255;Name=DOLE_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14255;old_locus_tag=Dole_2772 NC_009943.1 Protein Homology CDS 3344344 3345126 . + 0 ID=cds-WP_012176186.1;Parent=gene-DOLE_RS14255;Dbxref=Genbank:WP_012176186.1;Name=WP_012176186.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949611.1;locus_tag=DOLE_RS14255;product=acyl-CoA dehydratase activase;protein_id=WP_012176186.1;transl_table=11 NC_009943.1 RefSeq gene 3345538 3346281 . + . ID=gene-DOLE_RS14260;Name=DOLE_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14260;old_locus_tag=Dole_2773 NC_009943.1 Protein Homology CDS 3345538 3346281 . + 0 ID=cds-WP_012176187.1;Parent=gene-DOLE_RS14260;Dbxref=Genbank:WP_012176187.1;Name=WP_012176187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015555.2;locus_tag=DOLE_RS14260;product=hypothetical protein;protein_id=WP_012176187.1;transl_table=11 NC_009943.1 RefSeq gene 3346281 3347411 . + . ID=gene-DOLE_RS14265;Name=DOLE_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14265;old_locus_tag=Dole_2774 NC_009943.1 Protein Homology CDS 3346281 3347411 . + 0 ID=cds-WP_012176188.1;Parent=gene-DOLE_RS14265;Dbxref=Genbank:WP_012176188.1;Name=WP_012176188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017828.2;locus_tag=DOLE_RS14265;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012176188.1;transl_table=11 NC_009943.1 RefSeq gene 3347414 3348823 . + . ID=gene-DOLE_RS14270;Name=DOLE_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14270;old_locus_tag=Dole_2775 NC_009943.1 Protein Homology CDS 3347414 3348823 . + 0 ID=cds-WP_012176189.1;Parent=gene-DOLE_RS14270;Dbxref=Genbank:WP_012176189.1;Name=WP_012176189.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017828.2;locus_tag=DOLE_RS14270;product=2-hydroxyacyl-CoA dehydratase family protein;protein_id=WP_012176189.1;transl_table=11 NC_009943.1 RefSeq gene 3349139 3349957 . + . ID=gene-DOLE_RS14275;Name=DOLE_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14275;old_locus_tag=Dole_2776 NC_009943.1 Protein Homology CDS 3349139 3349957 . + 0 ID=cds-WP_012176190.1;Parent=gene-DOLE_RS14275;Dbxref=Genbank:WP_012176190.1;Name=WP_012176190.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947972.1;locus_tag=DOLE_RS14275;product=acyl-CoA dehydratase activase;protein_id=WP_012176190.1;transl_table=11 NC_009943.1 RefSeq gene 3350176 3350958 . + . ID=gene-DOLE_RS14280;Name=DOLE_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14280;old_locus_tag=Dole_2777 NC_009943.1 Protein Homology CDS 3350176 3350958 . + 0 ID=cds-WP_012176191.1;Parent=gene-DOLE_RS14280;Dbxref=Genbank:WP_012176191.1;Name=WP_012176191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013793.2;locus_tag=DOLE_RS14280;product=AAA family ATPase;protein_id=WP_012176191.1;transl_table=11 NC_009943.1 RefSeq gene 3351527 3352012 . + . ID=gene-DOLE_RS14285;Name=DOLE_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14285 NC_009943.1 Protein Homology CDS 3351527 3352012 . + 0 ID=cds-WP_041280598.1;Parent=gene-DOLE_RS14285;Dbxref=Genbank:WP_041280598.1;Name=WP_041280598.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014244.2;locus_tag=DOLE_RS14285;product=M50 family metallopeptidase;protein_id=WP_041280598.1;transl_table=11 NC_009943.1 RefSeq gene 3352172 3352675 . - . ID=gene-DOLE_RS14290;Name=DOLE_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14290;old_locus_tag=Dole_2778 NC_009943.1 GeneMarkS-2+ CDS 3352172 3352675 . - 0 ID=cds-WP_012176192.1;Parent=gene-DOLE_RS14290;Dbxref=Genbank:WP_012176192.1;Name=WP_012176192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14290;product=hypothetical protein;protein_id=WP_012176192.1;transl_table=11 NC_009943.1 RefSeq gene 3353790 3355019 . - . ID=gene-DOLE_RS14300;Name=DOLE_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14300;old_locus_tag=Dole_2779 NC_009943.1 Protein Homology CDS 3353790 3355019 . - 0 ID=cds-WP_012176193.1;Parent=gene-DOLE_RS14300;Dbxref=Genbank:WP_012176193.1;Name=WP_012176193.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176193.1;locus_tag=DOLE_RS14300;product=LL-diaminopimelate aminotransferase;protein_id=WP_012176193.1;transl_table=11 NC_009943.1 RefSeq gene 3355012 3355398 . + . ID=gene-DOLE_RS18310;Name=DOLE_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18310;old_locus_tag=Dole_2780 NC_009943.1 GeneMarkS-2+ CDS 3355012 3355398 . + 0 ID=cds-WP_153304447.1;Parent=gene-DOLE_RS18310;Dbxref=Genbank:WP_153304447.1;Name=WP_153304447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18310;product=hypothetical protein;protein_id=WP_153304447.1;transl_table=11 NC_009943.1 RefSeq gene 3355450 3356121 . + . ID=gene-DOLE_RS14305;Name=DOLE_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14305;old_locus_tag=Dole_2781 NC_009943.1 GeneMarkS-2+ CDS 3355450 3356121 . + 0 ID=cds-WP_012176195.1;Parent=gene-DOLE_RS14305;Dbxref=Genbank:WP_012176195.1;Name=WP_012176195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14305;product=hypothetical protein;protein_id=WP_012176195.1;transl_table=11 NC_009943.1 RefSeq gene 3356393 3357568 . - . ID=gene-DOLE_RS14310;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=DOLE_RS14310;old_locus_tag=Dole_2782 NC_009943.1 Protein Homology CDS 3356393 3357568 . - 0 ID=cds-WP_012176196.1;Parent=gene-DOLE_RS14310;Dbxref=Genbank:WP_012176196.1;Name=WP_012176196.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903175.1;locus_tag=DOLE_RS14310;product=cell division protein FtsZ;protein_id=WP_012176196.1;transl_table=11 NC_009943.1 RefSeq gene 3357634 3358857 . - . ID=gene-DOLE_RS14315;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=DOLE_RS14315;old_locus_tag=Dole_2783 NC_009943.1 Protein Homology CDS 3357634 3358857 . - 0 ID=cds-WP_012176197.1;Parent=gene-DOLE_RS14315;Dbxref=Genbank:WP_012176197.1;Name=WP_012176197.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903174.1;locus_tag=DOLE_RS14315;product=cell division protein FtsA;protein_id=WP_012176197.1;transl_table=11 NC_009943.1 RefSeq gene 3358839 3359735 . - . ID=gene-DOLE_RS14320;Name=DOLE_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14320;old_locus_tag=Dole_2784 NC_009943.1 Protein Homology CDS 3358839 3359735 . - 0 ID=cds-WP_012176198.1;Parent=gene-DOLE_RS14320;Dbxref=Genbank:WP_012176198.1;Name=WP_012176198.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015739.2;locus_tag=DOLE_RS14320;product=FtsQ-type POTRA domain-containing protein;protein_id=WP_012176198.1;transl_table=11 NC_009943.1 RefSeq gene 3359722 3360663 . - . ID=gene-DOLE_RS14325;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=DOLE_RS14325;old_locus_tag=Dole_2785 NC_009943.1 Protein Homology CDS 3359722 3360663 . - 0 ID=cds-WP_012176199.1;Parent=gene-DOLE_RS14325;Dbxref=Genbank:WP_012176199.1;Name=WP_012176199.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: protein motif:HMM:NF010480.0;locus_tag=DOLE_RS14325;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_012176199.1;transl_table=11 NC_009943.1 RefSeq gene 3360683 3362056 . - . ID=gene-DOLE_RS14330;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=DOLE_RS14330;old_locus_tag=Dole_2786 NC_009943.1 Protein Homology CDS 3360683 3362056 . - 0 ID=cds-WP_012176200.1;Parent=gene-DOLE_RS14330;Dbxref=Genbank:WP_012176200.1;Name=WP_012176200.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176200.1;locus_tag=DOLE_RS14330;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_012176200.1;transl_table=11 NC_009943.1 RefSeq gene 3362047 3363204 . - . ID=gene-DOLE_RS14335;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=DOLE_RS14335;old_locus_tag=Dole_2787 NC_009943.1 Protein Homology CDS 3362047 3363204 . - 0 ID=cds-WP_012176201.1;Parent=gene-DOLE_RS14335;Dbxref=Genbank:WP_012176201.1;Name=WP_012176201.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: protein motif:HMM:TIGR01133.1;locus_tag=DOLE_RS14335;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_012176201.1;transl_table=11 NC_009943.1 RefSeq gene 3363197 3364312 . - . ID=gene-DOLE_RS14340;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=DOLE_RS14340;old_locus_tag=Dole_2788 NC_009943.1 Protein Homology CDS 3363197 3364312 . - 0 ID=cds-WP_012176202.1;Parent=gene-DOLE_RS14340;Dbxref=Genbank:WP_012176202.1;Name=WP_012176202.1;Ontology_term=GO:0009252,GO:0051301,GO:0003674,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965899.1;locus_tag=DOLE_RS14340;product=putative lipid II flippase FtsW;protein_id=WP_012176202.1;transl_table=11 NC_009943.1 RefSeq gene 3364299 3365678 . - . ID=gene-DOLE_RS14345;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=DOLE_RS14345;old_locus_tag=Dole_2789 NC_009943.1 Protein Homology CDS 3364299 3365678 . - 0 ID=cds-WP_012176203.1;Parent=gene-DOLE_RS14345;Dbxref=Genbank:WP_012176203.1;Name=WP_012176203.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176203.1;locus_tag=DOLE_RS14345;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_012176203.1;transl_table=11 NC_009943.1 RefSeq gene 3365678 3366757 . - . ID=gene-DOLE_RS14350;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=DOLE_RS14350;old_locus_tag=Dole_2790 NC_009943.1 Protein Homology CDS 3365678 3366757 . - 0 ID=cds-WP_012176204.1;Parent=gene-DOLE_RS14350;Dbxref=Genbank:WP_012176204.1;Name=WP_012176204.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176204.1;locus_tag=DOLE_RS14350;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_012176204.1;transl_table=11 NC_009943.1 RefSeq gene 3366760 3368178 . - . ID=gene-DOLE_RS14355;Name=DOLE_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14355;old_locus_tag=Dole_2791 NC_009943.1 Protein Homology CDS 3366760 3368178 . - 0 ID=cds-WP_012176205.1;Parent=gene-DOLE_RS14355;Dbxref=Genbank:WP_012176205.1;Name=WP_012176205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01143.1;locus_tag=DOLE_RS14355;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_012176205.1;transl_table=11 NC_009943.1 RefSeq gene 3368209 3369798 . - . ID=gene-DOLE_RS14360;Name=DOLE_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14360;old_locus_tag=Dole_2792 NC_009943.1 Protein Homology CDS 3368209 3369798 . - 0 ID=cds-WP_012176206.1;Parent=gene-DOLE_RS14360;Dbxref=Genbank:WP_012176206.1;Name=WP_012176206.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878544.1;locus_tag=DOLE_RS14360;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_012176206.1;transl_table=11 NC_009943.1 RefSeq gene 3369795 3371555 . - . ID=gene-DOLE_RS14365;Name=DOLE_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14365;old_locus_tag=Dole_2793 NC_009943.1 Protein Homology CDS 3369795 3371555 . - 0 ID=cds-WP_012176207.1;Parent=gene-DOLE_RS14365;Dbxref=Genbank:WP_012176207.1;Name=WP_012176207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015903164.1;locus_tag=DOLE_RS14365;product=penicillin-binding protein 2;protein_id=WP_012176207.1;transl_table=11 NC_009943.1 RefSeq gene 3371552 3371848 . - . ID=gene-DOLE_RS14370;Name=DOLE_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14370;old_locus_tag=Dole_2794 NC_009943.1 Protein Homology CDS 3371552 3371848 . - 0 ID=cds-WP_012176208.1;Parent=gene-DOLE_RS14370;Dbxref=Genbank:WP_012176208.1;Name=WP_012176208.1;Ontology_term=GO:0051301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF016860.2;locus_tag=DOLE_RS14370;product=cell division protein FtsL;protein_id=WP_012176208.1;transl_table=11 NC_009943.1 RefSeq gene 3371865 3372803 . - . ID=gene-DOLE_RS14375;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=DOLE_RS14375;old_locus_tag=Dole_2795 NC_009943.1 Protein Homology CDS 3371865 3372803 . - 0 ID=cds-WP_012176209.1;Parent=gene-DOLE_RS14375;Dbxref=Genbank:WP_012176209.1;Name=WP_012176209.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176209.1;locus_tag=DOLE_RS14375;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_012176209.1;transl_table=11 NC_009943.1 RefSeq gene 3372805 3373245 . - . ID=gene-DOLE_RS14380;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=DOLE_RS14380;old_locus_tag=Dole_2796 NC_009943.1 Protein Homology CDS 3372805 3373245 . - 0 ID=cds-WP_012176210.1;Parent=gene-DOLE_RS14380;Dbxref=Genbank:WP_012176210.1;Name=WP_012176210.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176210.1;locus_tag=DOLE_RS14380;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_012176210.1;transl_table=11 NC_009943.1 RefSeq gene 3373488 3374483 . + . ID=gene-DOLE_RS14385;Name=DOLE_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14385;old_locus_tag=Dole_2797 NC_009943.1 Protein Homology CDS 3373488 3374483 . + 0 ID=cds-WP_012176211.1;Parent=gene-DOLE_RS14385;Dbxref=Genbank:WP_012176211.1;Name=WP_012176211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904949.1;locus_tag=DOLE_RS14385;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_012176211.1;transl_table=11 NC_009943.1 RefSeq gene 3374604 3377150 . + . ID=gene-DOLE_RS14390;Name=DOLE_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14390;old_locus_tag=Dole_2798 NC_009943.1 Protein Homology CDS 3374604 3377150 . + 0 ID=cds-WP_012176212.1;Parent=gene-DOLE_RS14390;Dbxref=Genbank:WP_012176212.1;Name=WP_012176212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013927.2;locus_tag=DOLE_RS14390;product=penicillin acylase family protein;protein_id=WP_012176212.1;transl_table=11 NC_009943.1 RefSeq gene 3377449 3378303 . + . ID=gene-DOLE_RS14395;Name=DOLE_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14395;old_locus_tag=Dole_2799 NC_009943.1 Protein Homology CDS 3377449 3378303 . + 0 ID=cds-WP_012176213.1;Parent=gene-DOLE_RS14395;Dbxref=Genbank:WP_012176213.1;Name=WP_012176213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023568.2;locus_tag=DOLE_RS14395;product=alpha/beta hydrolase;protein_id=WP_012176213.1;transl_table=11 NC_009943.1 RefSeq gene 3378320 3379390 . - . ID=gene-DOLE_RS14400;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=DOLE_RS14400;old_locus_tag=Dole_2800 NC_009943.1 Protein Homology CDS 3378320 3379390 . - 0 ID=cds-WP_012176214.1;Parent=gene-DOLE_RS14400;Dbxref=Genbank:WP_012176214.1;Name=WP_012176214.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00157.1;locus_tag=DOLE_RS14400;product=ribosome small subunit-dependent GTPase A;protein_id=WP_012176214.1;transl_table=11 NC_009943.1 RefSeq gene 3379784 3381721 . - . ID=gene-DOLE_RS14405;Name=DOLE_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14405;old_locus_tag=Dole_2801 NC_009943.1 Protein Homology CDS 3379784 3381721 . - 0 ID=cds-WP_041280601.1;Parent=gene-DOLE_RS14405;Dbxref=Genbank:WP_041280601.1;Name=WP_041280601.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: protein motif:HMM:TIGR01511.1;locus_tag=DOLE_RS14405;product=heavy metal translocating P-type ATPase;protein_id=WP_041280601.1;transl_table=11 NC_009943.1 RefSeq gene 3381731 3381955 . + . ID=gene-DOLE_RS18315;Name=DOLE_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18315 NC_009943.1 GeneMarkS-2+ CDS 3381731 3381955 . + 0 ID=cds-WP_153304448.1;Parent=gene-DOLE_RS18315;Dbxref=Genbank:WP_153304448.1;Name=WP_153304448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18315;product=hypothetical protein;protein_id=WP_153304448.1;transl_table=11 NC_009943.1 RefSeq gene 3382148 3382783 . - . ID=gene-DOLE_RS14420;Name=DOLE_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14420;old_locus_tag=Dole_2802 NC_009943.1 Protein Homology CDS 3382148 3382783 . - 0 ID=cds-WP_012176216.1;Parent=gene-DOLE_RS14420;Dbxref=Genbank:WP_012176216.1;Name=WP_012176216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876436.1;locus_tag=DOLE_RS14420;product=hypothetical protein;protein_id=WP_012176216.1;transl_table=11 NC_009943.1 RefSeq gene 3382767 3383318 . - . ID=gene-DOLE_RS14425;Name=DOLE_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14425;old_locus_tag=Dole_2803 NC_009943.1 Protein Homology CDS 3382767 3383318 . - 0 ID=cds-WP_012176217.1;Parent=gene-DOLE_RS14425;Dbxref=Genbank:WP_012176217.1;Name=WP_012176217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876437.1;locus_tag=DOLE_RS14425;product=YeeE/YedE thiosulfate transporter family protein;protein_id=WP_012176217.1;transl_table=11 NC_009943.1 RefSeq gene 3383315 3383857 . - . ID=gene-DOLE_RS14430;Name=DOLE_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14430;old_locus_tag=Dole_2804 NC_009943.1 Protein Homology CDS 3383315 3383857 . - 0 ID=cds-WP_012176218.1;Parent=gene-DOLE_RS14430;Dbxref=Genbank:WP_012176218.1;Name=WP_012176218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876438.1;locus_tag=DOLE_RS14430;product=YeeE/YedE thiosulfate transporter family protein;protein_id=WP_012176218.1;transl_table=11 NC_009943.1 RefSeq gene 3383860 3384948 . - . ID=gene-DOLE_RS14435;Name=DOLE_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14435;old_locus_tag=Dole_2805 NC_009943.1 Protein Homology CDS 3383860 3384948 . - 0 ID=cds-WP_012176219.1;Parent=gene-DOLE_RS14435;Dbxref=Genbank:WP_012176219.1;Name=WP_012176219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964561.1;locus_tag=DOLE_RS14435;product=sulfurtransferase;protein_id=WP_012176219.1;transl_table=11 NC_009943.1 RefSeq gene 3384964 3385437 . - . ID=gene-DOLE_RS14440;Name=DOLE_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14440;old_locus_tag=Dole_2806 NC_009943.1 Protein Homology CDS 3384964 3385437 . - 0 ID=cds-WP_012176220.1;Parent=gene-DOLE_RS14440;Dbxref=Genbank:WP_012176220.1;Name=WP_012176220.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF020123.2;locus_tag=DOLE_RS14440;product=redoxin domain-containing protein;protein_id=WP_012176220.1;transl_table=11 NC_009943.1 RefSeq gene 3386458 3387834 . - . ID=gene-DOLE_RS14445;Name=DOLE_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14445;old_locus_tag=Dole_2807 NC_009943.1 Protein Homology CDS 3386458 3387834 . - 0 ID=cds-WP_041281221.1;Parent=gene-DOLE_RS14445;Dbxref=Genbank:WP_041281221.1;Name=WP_041281221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072348.1;locus_tag=DOLE_RS14445;product=sigma-54 dependent transcriptional regulator;protein_id=WP_041281221.1;transl_table=11 NC_009943.1 RefSeq gene 3387855 3389642 . - . ID=gene-DOLE_RS14450;Name=DOLE_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14450;old_locus_tag=Dole_2808 NC_009943.1 Protein Homology CDS 3387855 3389642 . - 0 ID=cds-WP_012176222.1;Parent=gene-DOLE_RS14450;Dbxref=Genbank:WP_012176222.1;Name=WP_012176222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS14450;product=ATP-binding protein;protein_id=WP_012176222.1;transl_table=11 NC_009943.1 RefSeq gene 3390075 3390557 . + . ID=gene-DOLE_RS14455;Name=DOLE_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14455;old_locus_tag=Dole_2809 NC_009943.1 Protein Homology CDS 3390075 3390557 . + 0 ID=cds-WP_012176223.1;Parent=gene-DOLE_RS14455;Dbxref=Genbank:WP_012176223.1;Name=WP_012176223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025173.2;locus_tag=DOLE_RS14455;product=periplasmic heavy metal sensor;protein_id=WP_012176223.1;transl_table=11 NC_009943.1 RefSeq gene 3391049 3391432 . + . ID=gene-DOLE_RS14460;Name=DOLE_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14460;old_locus_tag=Dole_2810 NC_009943.1 Protein Homology CDS 3391049 3391432 . + 0 ID=cds-WP_012176224.1;Parent=gene-DOLE_RS14460;Dbxref=Genbank:WP_012176224.1;Name=WP_012176224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959559.1;locus_tag=DOLE_RS14460;product=response regulator;protein_id=WP_012176224.1;transl_table=11 NC_009943.1 RefSeq gene 3391485 3392981 . - . ID=gene-DOLE_RS14465;Name=DOLE_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14465;old_locus_tag=Dole_2811 NC_009943.1 Protein Homology CDS 3391485 3392981 . - 0 ID=cds-WP_012176225.1;Parent=gene-DOLE_RS14465;Dbxref=Genbank:WP_012176225.1;Name=WP_012176225.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959558.1;locus_tag=DOLE_RS14465;product=response regulator;protein_id=WP_012176225.1;transl_table=11 NC_009943.1 RefSeq gene 3392971 3394458 . - . ID=gene-DOLE_RS14470;Name=DOLE_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14470;old_locus_tag=Dole_2812 NC_009943.1 Protein Homology CDS 3392971 3394458 . - 0 ID=cds-WP_012176226.1;Parent=gene-DOLE_RS14470;Dbxref=Genbank:WP_012176226.1;Name=WP_012176226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877615.1;locus_tag=DOLE_RS14470;product=ATP-binding protein;protein_id=WP_012176226.1;transl_table=11 NC_009943.1 RefSeq gene 3394650 3396242 . + . ID=gene-DOLE_RS14475;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=DOLE_RS14475;old_locus_tag=Dole_2813 NC_009943.1 Protein Homology CDS 3394650 3396242 . + 0 ID=cds-WP_041280605.1;Parent=gene-DOLE_RS14475;Dbxref=Genbank:WP_041280605.1;Name=WP_041280605.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589938.1;locus_tag=DOLE_RS14475;product=phosphoglycerate dehydrogenase;protein_id=WP_041280605.1;transl_table=11 NC_009943.1 RefSeq gene 3396365 3396691 . + . ID=gene-DOLE_RS14480;Name=DOLE_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14480;old_locus_tag=Dole_2814 NC_009943.1 Protein Homology CDS 3396365 3396691 . + 0 ID=cds-WP_012176228.1;Parent=gene-DOLE_RS14480;Dbxref=Genbank:WP_012176228.1;Name=WP_012176228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004074415.1;locus_tag=DOLE_RS14480;product=DUF1844 domain-containing protein;protein_id=WP_012176228.1;transl_table=11 NC_009943.1 RefSeq gene 3396688 3398145 . + . ID=gene-DOLE_RS14485;Name=DOLE_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14485;old_locus_tag=Dole_2815 NC_009943.1 Protein Homology CDS 3396688 3398145 . + 0 ID=cds-WP_012176229.1;Parent=gene-DOLE_RS14485;Dbxref=Genbank:WP_012176229.1;Name=WP_012176229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02037.1;locus_tag=DOLE_RS14485;product=DegQ family serine endoprotease;protein_id=WP_012176229.1;transl_table=11 NC_009943.1 RefSeq gene 3398264 3399121 . + . ID=gene-DOLE_RS14490;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=DOLE_RS14490;old_locus_tag=Dole_2816 NC_009943.1 Protein Homology CDS 3398264 3399121 . + 0 ID=cds-WP_012176230.1;Parent=gene-DOLE_RS14490;Dbxref=Genbank:WP_012176230.1;Name=WP_012176230.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: protein motif:HMM:NF011202.0;locus_tag=DOLE_RS14490;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_012176230.1;transl_table=11 NC_009943.1 RefSeq gene 3399144 3399219 . + . ID=gene-DOLE_RS14495;Name=DOLE_RS14495;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS14495;old_locus_tag=Dole_R0046 NC_009943.1 tRNAscan-SE tRNA 3399144 3399219 . + . ID=rna-DOLE_RS14495;Parent=gene-DOLE_RS14495;anticodon=(pos:3399177..3399179);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS14495;product=tRNA-Gln NC_009943.1 tRNAscan-SE exon 3399144 3399219 . + . ID=exon-DOLE_RS14495-1;Parent=rna-DOLE_RS14495;anticodon=(pos:3399177..3399179);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS14495;product=tRNA-Gln NC_009943.1 RefSeq gene 3399258 3400211 . + . ID=gene-DOLE_RS14500;Name=DOLE_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14500;old_locus_tag=Dole_2817 NC_009943.1 Protein Homology CDS 3399258 3400211 . + 0 ID=cds-WP_012176231.1;Parent=gene-DOLE_RS14500;Dbxref=Genbank:WP_012176231.1;Name=WP_012176231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013162837.1;locus_tag=DOLE_RS14500;product=ribose-phosphate pyrophosphokinase;protein_id=WP_012176231.1;transl_table=11 NC_009943.1 RefSeq gene 3400263 3400916 . + . ID=gene-DOLE_RS14505;Name=DOLE_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14505;old_locus_tag=Dole_2818 NC_009943.1 Protein Homology CDS 3400263 3400916 . + 0 ID=cds-WP_012176232.1;Parent=gene-DOLE_RS14505;Dbxref=Genbank:WP_012176232.1;Name=WP_012176232.1;Ontology_term=GO:0006412,GO:0006950,GO:0003735,GO:0008097,GO:0000315,GO:0022625;gbkey=CDS;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: protein motif:HMM:TIGR00731.1;locus_tag=DOLE_RS14505;product=50S ribosomal protein L25;protein_id=WP_012176232.1;transl_table=11 NC_009943.1 RefSeq gene 3400956 3401537 . + . ID=gene-DOLE_RS14510;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=DOLE_RS14510;old_locus_tag=Dole_2819 NC_009943.1 Protein Homology CDS 3400956 3401537 . + 0 ID=cds-WP_012176233.1;Parent=gene-DOLE_RS14510;Dbxref=Genbank:WP_012176233.1;Name=WP_012176233.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587513.1;locus_tag=DOLE_RS14510;product=aminoacyl-tRNA hydrolase;protein_id=WP_012176233.1;transl_table=11 NC_009943.1 RefSeq gene 3401596 3403668 . + . ID=gene-DOLE_RS14515;Name=DOLE_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14515;old_locus_tag=Dole_2820 NC_009943.1 Protein Homology CDS 3401596 3403668 . + 0 ID=cds-WP_012176234.1;Parent=gene-DOLE_RS14515;Dbxref=Genbank:WP_012176234.1;Name=WP_012176234.1;Ontology_term=GO:1902600,GO:0009678;gbkey=CDS;go_function=pyrophosphate hydrolysis-driven proton transmembrane transporter activity|0009678||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878521.1;locus_tag=DOLE_RS14515;product=sodium-translocating pyrophosphatase;protein_id=WP_012176234.1;transl_table=11 NC_009943.1 RefSeq gene 3403803 3404369 . + . ID=gene-DOLE_RS14520;Name=DOLE_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14520;old_locus_tag=Dole_2821 NC_009943.1 Protein Homology CDS 3403803 3404369 . + 0 ID=cds-WP_012176235.1;Parent=gene-DOLE_RS14520;Dbxref=Genbank:WP_012176235.1;Name=WP_012176235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878522.1;locus_tag=DOLE_RS14520;product=CarD family transcriptional regulator;protein_id=WP_012176235.1;transl_table=11 NC_009943.1 RefSeq gene 3404383 3405345 . + . ID=gene-DOLE_RS14525;Name=DOLE_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14525;old_locus_tag=Dole_2822 NC_009943.1 Protein Homology CDS 3404383 3405345 . + 0 ID=cds-WP_041281230.1;Parent=gene-DOLE_RS14525;Dbxref=Genbank:WP_041281230.1;Name=WP_041281230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00005.1;locus_tag=DOLE_RS14525;product=RluA family pseudouridine synthase;protein_id=WP_041281230.1;transl_table=11 NC_009943.1 RefSeq gene 3405389 3406267 . + . ID=gene-DOLE_RS14530;Name=DOLE_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14530;old_locus_tag=Dole_2823 NC_009943.1 Protein Homology CDS 3405389 3406267 . + 0 ID=cds-WP_012176237.1;Parent=gene-DOLE_RS14530;Dbxref=Genbank:WP_012176237.1;Name=WP_012176237.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF005881.0;locus_tag=DOLE_RS14530;product=SDR family oxidoreductase;protein_id=WP_012176237.1;transl_table=11 NC_009943.1 RefSeq gene 3406264 3407340 . + . ID=gene-DOLE_RS14535;Name=DOLE_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14535;old_locus_tag=Dole_2824 NC_009943.1 Protein Homology CDS 3406264 3407340 . + 0 ID=cds-WP_012176238.1;Parent=gene-DOLE_RS14535;Dbxref=Genbank:WP_012176238.1;Name=WP_012176238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609359.1;locus_tag=DOLE_RS14535;product=hypothetical protein;protein_id=WP_012176238.1;transl_table=11 NC_009943.1 RefSeq gene 3407431 3409530 . - . ID=gene-DOLE_RS14540;Name=DOLE_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14540;old_locus_tag=Dole_2825 NC_009943.1 Protein Homology CDS 3407431 3409530 . - 0 ID=cds-WP_012176239.1;Parent=gene-DOLE_RS14540;Dbxref=Genbank:WP_012176239.1;Name=WP_012176239.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905054.1;locus_tag=DOLE_RS14540;product=FAD-dependent oxidoreductase;protein_id=WP_012176239.1;transl_table=11 NC_009943.1 RefSeq gene 3409567 3410142 . - . ID=gene-DOLE_RS14545;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=DOLE_RS14545;old_locus_tag=Dole_2826 NC_009943.1 Protein Homology CDS 3409567 3410142 . - 0 ID=cds-WP_012176240.1;Parent=gene-DOLE_RS14545;Dbxref=Genbank:WP_012176240.1;Name=WP_012176240.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073279.1;locus_tag=DOLE_RS14545;product=electron transport complex subunit RsxA;protein_id=WP_012176240.1;transl_table=11 NC_009943.1 RefSeq gene 3410152 3410754 . - . ID=gene-DOLE_RS14550;Name=DOLE_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14550;old_locus_tag=Dole_2827 NC_009943.1 Protein Homology CDS 3410152 3410754 . - 0 ID=cds-WP_012176241.1;Parent=gene-DOLE_RS14550;Dbxref=Genbank:WP_012176241.1;Name=WP_012176241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073280.1;locus_tag=DOLE_RS14550;product=electron transport complex subunit E;protein_id=WP_012176241.1;transl_table=11 NC_009943.1 RefSeq gene 3410770 3411360 . - . ID=gene-DOLE_RS14555;Name=DOLE_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14555;old_locus_tag=Dole_2828 NC_009943.1 Protein Homology CDS 3410770 3411360 . - 0 ID=cds-WP_012176242.1;Parent=gene-DOLE_RS14555;Dbxref=Genbank:WP_012176242.1;Name=WP_012176242.1;Ontology_term=GO:0010181,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905051.1;locus_tag=DOLE_RS14555;product=FMN-binding protein;protein_id=WP_012176242.1;transl_table=11 NC_009943.1 RefSeq gene 3411360 3412322 . - . ID=gene-DOLE_RS14560;Name=DOLE_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14560;old_locus_tag=Dole_2829 NC_009943.1 Protein Homology CDS 3411360 3412322 . - 0 ID=cds-WP_012176243.1;Parent=gene-DOLE_RS14560;Dbxref=Genbank:WP_012176243.1;Name=WP_012176243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878528.1;locus_tag=DOLE_RS14560;product=RnfABCDGE type electron transport complex subunit D;protein_id=WP_012176243.1;transl_table=11 NC_009943.1 RefSeq gene 3412312 3413595 . - . ID=gene-DOLE_RS14565;Name=DOLE_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14565;old_locus_tag=Dole_2830 NC_009943.1 Protein Homology CDS 3412312 3413595 . - 0 ID=cds-WP_012176244.1;Parent=gene-DOLE_RS14565;Dbxref=Genbank:WP_012176244.1;Name=WP_012176244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024634.2;locus_tag=DOLE_RS14565;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_012176244.1;transl_table=11 NC_009943.1 RefSeq gene 3413659 3414213 . - . ID=gene-DOLE_RS17615;Name=DOLE_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17615;old_locus_tag=Dole_2831 NC_009943.1 Protein Homology CDS 3413659 3414213 . - 0 ID=cds-WP_012176245.1;Parent=gene-DOLE_RS17615;Dbxref=Genbank:WP_012176245.1;Name=WP_012176245.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014176.2;locus_tag=DOLE_RS17615;product=cytochrome c3 family protein;protein_id=WP_012176245.1;transl_table=11 NC_009943.1 RefSeq gene 3414425 3415120 . - . ID=gene-DOLE_RS14580;Name=DOLE_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14580;old_locus_tag=Dole_2832 NC_009943.1 Protein Homology CDS 3414425 3415120 . - 0 ID=cds-WP_012176246.1;Parent=gene-DOLE_RS14580;Dbxref=Genbank:WP_012176246.1;Name=WP_012176246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163100.1;locus_tag=DOLE_RS14580;product=transglycosylase SLT domain-containing protein;protein_id=WP_012176246.1;transl_table=11 NC_009943.1 RefSeq gene 3415265 3415540 . - . ID=gene-DOLE_RS14585;Name=DOLE_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14585;old_locus_tag=Dole_2833 NC_009943.1 Protein Homology CDS 3415265 3415540 . - 0 ID=cds-WP_012176247.1;Parent=gene-DOLE_RS14585;Dbxref=Genbank:WP_012176247.1;Name=WP_012176247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949045.1;locus_tag=DOLE_RS14585;product=PxxKW family cysteine-rich protein;protein_id=WP_012176247.1;transl_table=11 NC_009943.1 RefSeq gene 3415758 3415979 . + . ID=gene-DOLE_RS18690;Name=DOLE_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18690;old_locus_tag=Dole_2834 NC_009943.1 Protein Homology CDS 3415758 3415979 . + 0 ID=cds-WP_083766625.1;Parent=gene-DOLE_RS18690;Dbxref=Genbank:WP_083766625.1;Name=WP_083766625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_258313616.1;locus_tag=DOLE_RS18690;product=UXX-star (seleno)protein family 1;protein_id=WP_083766625.1;transl_except=(pos:3415794..3415796%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 3416047 3416697 . + . ID=gene-DOLE_RS14590;Name=DOLE_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14590;old_locus_tag=Dole_2835 NC_009943.1 Protein Homology CDS 3416047 3416697 . + 0 ID=cds-WP_012176249.1;Parent=gene-DOLE_RS14590;Dbxref=Genbank:WP_012176249.1;Name=WP_012176249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947455.1;locus_tag=DOLE_RS14590;product=TIGR00730 family Rossman fold protein;protein_id=WP_012176249.1;transl_table=11 NC_009943.1 RefSeq gene 3417413 3419170 . - . ID=gene-DOLE_RS14600;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=DOLE_RS14600;old_locus_tag=Dole_2836 NC_009943.1 Protein Homology CDS 3417413 3419170 . - 0 ID=cds-WP_012176250.1;Parent=gene-DOLE_RS14600;Dbxref=Genbank:WP_012176250.1;Name=WP_012176250.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878236.1;locus_tag=DOLE_RS14600;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_012176250.1;transl_table=11 NC_009943.1 RefSeq gene 3419170 3420339 . - . ID=gene-DOLE_RS14605;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=DOLE_RS14605;old_locus_tag=Dole_2837 NC_009943.1 Protein Homology CDS 3419170 3420339 . - 0 ID=cds-WP_012176251.1;Parent=gene-DOLE_RS14605;Dbxref=Genbank:WP_012176251.1;Name=WP_012176251.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: protein motif:HMM:TIGR00215.1;locus_tag=DOLE_RS14605;product=lipid-A-disaccharide synthase;protein_id=WP_012176251.1;transl_table=11 NC_009943.1 RefSeq gene 3420332 3421288 . - . ID=gene-DOLE_RS14610;Name=DOLE_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14610;old_locus_tag=Dole_2838 NC_009943.1 Protein Homology CDS 3420332 3421288 . - 0 ID=cds-WP_012176252.1;Parent=gene-DOLE_RS14610;Dbxref=Genbank:WP_012176252.1;Name=WP_012176252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405450.1;locus_tag=DOLE_RS14610;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_012176252.1;transl_table=11 NC_009943.1 RefSeq gene 3421307 3422128 . - . ID=gene-DOLE_RS14615;Name=lpxI;gbkey=Gene;gene=lpxI;gene_biotype=protein_coding;locus_tag=DOLE_RS14615;old_locus_tag=Dole_2839 NC_009943.1 Protein Homology CDS 3421307 3422128 . - 0 ID=cds-WP_012176253.1;Parent=gene-DOLE_RS14615;Dbxref=Genbank:WP_012176253.1;Name=WP_012176253.1;Note=LpxI%2C functionally equivalent to LpxH%2C replaces it in LPS biosynthesis in a minority of bacteria.;gbkey=CDS;gene=lpxI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904112.1;locus_tag=DOLE_RS14615;product=UDP-2%2C3-diacylglucosamine diphosphatase LpxI;protein_id=WP_012176253.1;transl_table=11 NC_009943.1 RefSeq gene 3422247 3423017 . - . ID=gene-DOLE_RS14620;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=DOLE_RS14620;old_locus_tag=Dole_2840 NC_009943.1 Protein Homology CDS 3422247 3423017 . - 0 ID=cds-WP_012176254.1;Parent=gene-DOLE_RS14620;Dbxref=Genbank:WP_012176254.1;Name=WP_012176254.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878232.1;locus_tag=DOLE_RS14620;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_012176254.1;transl_table=11 NC_009943.1 RefSeq gene 3423034 3423486 . - . ID=gene-DOLE_RS14625;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=DOLE_RS14625;old_locus_tag=Dole_2841 NC_009943.1 Protein Homology CDS 3423034 3423486 . - 0 ID=cds-WP_012176255.1;Parent=gene-DOLE_RS14625;Dbxref=Genbank:WP_012176255.1;Name=WP_012176255.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405705.1;locus_tag=DOLE_RS14625;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_012176255.1;transl_table=11 NC_009943.1 RefSeq gene 3423509 3424531 . - . ID=gene-DOLE_RS14630;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=DOLE_RS14630;old_locus_tag=Dole_2842 NC_009943.1 Protein Homology CDS 3423509 3424531 . - 0 ID=cds-WP_012176256.1;Parent=gene-DOLE_RS14630;Dbxref=Genbank:WP_012176256.1;Name=WP_012176256.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176256.1;locus_tag=DOLE_RS14630;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_012176256.1;transl_table=11 NC_009943.1 RefSeq gene 3424565 3425101 . - . ID=gene-DOLE_RS14635;Name=DOLE_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14635;old_locus_tag=Dole_2843 NC_009943.1 Protein Homology CDS 3424565 3425101 . - 0 ID=cds-WP_012176257.1;Parent=gene-DOLE_RS14635;Dbxref=Genbank:WP_012176257.1;Name=WP_012176257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015871.2;locus_tag=DOLE_RS14635;product=OmpH family outer membrane protein;protein_id=WP_012176257.1;transl_table=11 NC_009943.1 RefSeq gene 3425190 3427931 . - . ID=gene-DOLE_RS14640;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=DOLE_RS14640;old_locus_tag=Dole_2844 NC_009943.1 Protein Homology CDS 3425190 3427931 . - 0 ID=cds-WP_012176258.1;Parent=gene-DOLE_RS14640;Dbxref=Genbank:WP_012176258.1;Name=WP_012176258.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: protein motif:HMM:TIGR03303.1;locus_tag=DOLE_RS14640;product=outer membrane protein assembly factor BamA;protein_id=WP_012176258.1;transl_table=11 NC_009943.1 RefSeq gene 3427933 3428637 . - . ID=gene-DOLE_RS14645;Name=DOLE_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14645;old_locus_tag=Dole_2845 NC_009943.1 Protein Homology CDS 3427933 3428637 . - 0 ID=cds-WP_041281239.1;Parent=gene-DOLE_RS14645;Dbxref=Genbank:WP_041281239.1;Name=WP_041281239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878227.1;locus_tag=DOLE_RS14645;product=ABC transporter ATP-binding protein;protein_id=WP_041281239.1;transl_table=11 NC_009943.1 RefSeq gene 3428666 3429892 . - . ID=gene-DOLE_RS14650;Name=DOLE_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14650;old_locus_tag=Dole_2846 NC_009943.1 Protein Homology CDS 3428666 3429892 . - 0 ID=cds-WP_012176260.1;Parent=gene-DOLE_RS14650;Dbxref=Genbank:WP_012176260.1;Name=WP_012176260.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904106.1;locus_tag=DOLE_RS14650;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_012176260.1;transl_table=11 NC_009943.1 RefSeq gene 3429935 3431431 . - . ID=gene-DOLE_RS14655;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=DOLE_RS14655;old_locus_tag=Dole_2847 NC_009943.1 Protein Homology CDS 3429935 3431431 . - 0 ID=cds-WP_041280608.1;Parent=gene-DOLE_RS14655;Dbxref=Genbank:WP_041280608.1;Name=WP_041280608.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163529.1;locus_tag=DOLE_RS14655;product=lysine--tRNA ligase;protein_id=WP_041280608.1;transl_table=11 NC_009943.1 RefSeq gene 3431522 3432916 . - . ID=gene-DOLE_RS14660;Name=DOLE_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14660;old_locus_tag=Dole_2848 NC_009943.1 Protein Homology CDS 3431522 3432916 . - 0 ID=cds-WP_167320888.1;Parent=gene-DOLE_RS14660;Dbxref=Genbank:WP_167320888.1;Name=WP_167320888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS14660;product=ATP-binding protein;protein_id=WP_167320888.1;transl_table=11 NC_009943.1 RefSeq gene 3433011 3434222 . - . ID=gene-DOLE_RS14665;Name=DOLE_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14665;old_locus_tag=Dole_2849 NC_009943.1 Protein Homology CDS 3433011 3434222 . - 0 ID=cds-WP_012176263.1;Parent=gene-DOLE_RS14665;Dbxref=Genbank:WP_012176263.1;Name=WP_012176263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610913.1;locus_tag=DOLE_RS14665;product=type II secretion system F family protein;protein_id=WP_012176263.1;transl_table=11 NC_009943.1 RefSeq gene 3434703 3435869 . - . ID=gene-DOLE_RS14670;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=DOLE_RS14670;old_locus_tag=Dole_2850 NC_009943.1 Protein Homology CDS 3434703 3435869 . - 0 ID=cds-WP_012176264.1;Parent=gene-DOLE_RS14670;Dbxref=Genbank:WP_012176264.1;Name=WP_012176264.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176264.1;locus_tag=DOLE_RS14670;product=methionine adenosyltransferase;protein_id=WP_012176264.1;transl_table=11 NC_009943.1 RefSeq gene 3436284 3437621 . + . ID=gene-DOLE_RS14675;Name=DOLE_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14675;old_locus_tag=Dole_2851 NC_009943.1 Protein Homology CDS 3436284 3437621 . + 0 ID=cds-WP_012176265.1;Parent=gene-DOLE_RS14675;Dbxref=Genbank:WP_012176265.1;Name=WP_012176265.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018004.2;locus_tag=DOLE_RS14675;product=DUF1015 domain-containing protein;protein_id=WP_012176265.1;transl_table=11 NC_009943.1 RefSeq gene 3437647 3439230 . + . ID=gene-DOLE_RS14680;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=DOLE_RS14680;old_locus_tag=Dole_2852 NC_009943.1 Protein Homology CDS 3437647 3439230 . + 0 ID=cds-WP_012176266.1;Parent=gene-DOLE_RS14680;Dbxref=Genbank:WP_012176266.1;Name=WP_012176266.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589938.1;locus_tag=DOLE_RS14680;product=phosphoglycerate dehydrogenase;protein_id=WP_012176266.1;transl_table=11 NC_009943.1 RefSeq gene 3439220 3439492 . - . ID=gene-DOLE_RS14685;Name=DOLE_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14685 NC_009943.1 GeneMarkS-2+ CDS 3439220 3439492 . - 0 ID=cds-WP_153304450.1;Parent=gene-DOLE_RS14685;Dbxref=Genbank:WP_153304450.1;Name=WP_153304450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14685;product=hypothetical protein;protein_id=WP_153304450.1;transl_table=11 NC_009943.1 RefSeq gene 3439491 3440291 . + . ID=gene-DOLE_RS14690;Name=DOLE_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14690;old_locus_tag=Dole_2853 NC_009943.1 Protein Homology CDS 3439491 3440291 . + 0 ID=cds-WP_012176267.1;Parent=gene-DOLE_RS14690;Dbxref=Genbank:WP_012176267.1;Name=WP_012176267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878040.1;locus_tag=DOLE_RS14690;product=methyltetrahydrofolate cobalamin methyltransferase;protein_id=WP_012176267.1;transl_table=11 NC_009943.1 RefSeq gene 3440333 3441319 . + . ID=gene-DOLE_RS14695;Name=DOLE_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14695;old_locus_tag=Dole_2854 NC_009943.1 Protein Homology CDS 3440333 3441319 . + 0 ID=cds-WP_012176268.1;Parent=gene-DOLE_RS14695;Dbxref=Genbank:WP_012176268.1;Name=WP_012176268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904189.1;locus_tag=DOLE_RS14695;product=adenosine kinase;protein_id=WP_012176268.1;transl_table=11 NC_009943.1 RefSeq gene 3441341 3442009 . + . ID=gene-DOLE_RS14700;Name=DOLE_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14700;old_locus_tag=Dole_2855 NC_009943.1 Protein Homology CDS 3441341 3442009 . + 0 ID=cds-WP_012176269.1;Parent=gene-DOLE_RS14700;Dbxref=Genbank:WP_012176269.1;Name=WP_012176269.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024572.2;locus_tag=DOLE_RS14700;product=tetratricopeptide repeat protein;protein_id=WP_012176269.1;transl_table=11 NC_009943.1 RefSeq gene 3442041 3443954 . - . ID=gene-DOLE_RS14705;Name=DOLE_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14705;old_locus_tag=Dole_2856 NC_009943.1 Protein Homology CDS 3442041 3443954 . - 0 ID=cds-WP_012176270.1;Parent=gene-DOLE_RS14705;Dbxref=Genbank:WP_012176270.1;Name=WP_012176270.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725215.1;locus_tag=DOLE_RS14705;product=MFS transporter;protein_id=WP_012176270.1;transl_table=11 NC_009943.1 RefSeq gene 3444203 3444475 . - . ID=gene-DOLE_RS14710;Name=DOLE_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14710;old_locus_tag=Dole_2857 NC_009943.1 Protein Homology CDS 3444203 3444475 . - 0 ID=cds-WP_012176271.1;Parent=gene-DOLE_RS14710;Dbxref=Genbank:WP_012176271.1;Name=WP_012176271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175137.1;locus_tag=DOLE_RS14710;product=HU family DNA-binding protein;protein_id=WP_012176271.1;transl_table=11 NC_009943.1 RefSeq gene 3444657 3445445 . - . ID=gene-DOLE_RS14715;Name=DOLE_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14715;old_locus_tag=Dole_2858 NC_009943.1 Protein Homology CDS 3444657 3445445 . - 0 ID=cds-WP_153304451.1;Parent=gene-DOLE_RS14715;Dbxref=Genbank:WP_153304451.1;Name=WP_153304451.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DOLE_RS14715;product=HD domain-containing protein;protein_id=WP_153304451.1;transl_table=11 NC_009943.1 RefSeq gene 3445438 3446430 . - . ID=gene-DOLE_RS14720;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=DOLE_RS14720;old_locus_tag=Dole_2859 NC_009943.1 Protein Homology CDS 3445438 3446430 . - 0 ID=cds-WP_012176273.1;Parent=gene-DOLE_RS14720;Dbxref=Genbank:WP_012176273.1;Name=WP_012176273.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905412.1;locus_tag=DOLE_RS14720;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_012176273.1;transl_table=11 NC_009943.1 RefSeq gene 3446440 3447417 . - . ID=gene-DOLE_RS14725;Name=DOLE_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14725;old_locus_tag=Dole_2860 NC_009943.1 Protein Homology CDS 3446440 3447417 . - 0 ID=cds-WP_012176274.1;Parent=gene-DOLE_RS14725;Dbxref=Genbank:WP_012176274.1;Name=WP_012176274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010496.0;locus_tag=DOLE_RS14725;product=glucosyl-3-phosphoglycerate synthase;protein_id=WP_012176274.1;transl_table=11 NC_009943.1 RefSeq gene 3447398 3448567 . - . ID=gene-DOLE_RS14730;Name=DOLE_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14730;old_locus_tag=Dole_2861 NC_009943.1 GeneMarkS-2+ CDS 3447398 3448567 . - 0 ID=cds-WP_012176275.1;Parent=gene-DOLE_RS14730;Dbxref=Genbank:WP_012176275.1;Name=WP_012176275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14730;product=hypothetical protein;protein_id=WP_012176275.1;transl_table=11 NC_009943.1 RefSeq gene 3448677 3449369 . + . ID=gene-DOLE_RS14735;Name=DOLE_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14735;old_locus_tag=Dole_2862 NC_009943.1 Protein Homology CDS 3448677 3449369 . + 0 ID=cds-WP_012176276.1;Parent=gene-DOLE_RS14735;Dbxref=Genbank:WP_012176276.1;Name=WP_012176276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=DOLE_RS14735;product=histidine phosphatase family protein;protein_id=WP_012176276.1;transl_table=11 NC_009943.1 RefSeq gene 3449425 3449859 . + . ID=gene-DOLE_RS14740;Name=DOLE_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14740;old_locus_tag=Dole_2863 NC_009943.1 GeneMarkS-2+ CDS 3449425 3449859 . + 0 ID=cds-WP_012176277.1;Parent=gene-DOLE_RS14740;Dbxref=Genbank:WP_012176277.1;Name=WP_012176277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14740;product=hypothetical protein;protein_id=WP_012176277.1;transl_table=11 NC_009943.1 RefSeq gene 3449874 3450647 . + . ID=gene-DOLE_RS14745;Name=DOLE_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14745;old_locus_tag=Dole_2864 NC_009943.1 Protein Homology CDS 3449874 3450647 . + 0 ID=cds-WP_012176278.1;Parent=gene-DOLE_RS14745;Dbxref=Genbank:WP_012176278.1;Name=WP_012176278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012596.2;locus_tag=DOLE_RS14745;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012176278.1;transl_table=11 NC_009943.1 RefSeq gene 3451427 3451849 . - . ID=gene-DOLE_RS14750;Name=DOLE_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14750;old_locus_tag=Dole_2865 NC_009943.1 GeneMarkS-2+ CDS 3451427 3451849 . - 0 ID=cds-WP_012176279.1;Parent=gene-DOLE_RS14750;Dbxref=Genbank:WP_012176279.1;Name=WP_012176279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14750;product=hypothetical protein;protein_id=WP_012176279.1;transl_table=11 NC_009943.1 RefSeq gene 3452103 3453083 . - . ID=gene-DOLE_RS14755;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=DOLE_RS14755;old_locus_tag=Dole_2866 NC_009943.1 Protein Homology CDS 3452103 3453083 . - 0 ID=cds-WP_012176280.1;Parent=gene-DOLE_RS14755;Dbxref=Genbank:WP_012176280.1;Name=WP_012176280.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963799.1;locus_tag=DOLE_RS14755;product=tRNA dihydrouridine synthase DusB;protein_id=WP_012176280.1;transl_table=11 NC_009943.1 RefSeq gene 3453121 3453798 . - . ID=gene-DOLE_RS14760;Name=DOLE_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14760;old_locus_tag=Dole_2867 NC_009943.1 GeneMarkS-2+ CDS 3453121 3453798 . - 0 ID=cds-WP_012176281.1;Parent=gene-DOLE_RS14760;Dbxref=Genbank:WP_012176281.1;Name=WP_012176281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14760;product=hypothetical protein;protein_id=WP_012176281.1;transl_table=11 NC_009943.1 RefSeq gene 3453953 3454402 . + . ID=gene-DOLE_RS14765;Name=DOLE_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14765;old_locus_tag=Dole_2868 NC_009943.1 Protein Homology CDS 3453953 3454402 . + 0 ID=cds-WP_012176282.1;Parent=gene-DOLE_RS14765;Dbxref=Genbank:WP_012176282.1;Name=WP_012176282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403077.1;locus_tag=DOLE_RS14765;product=CoA-binding protein;protein_id=WP_012176282.1;transl_table=11 NC_009943.1 RefSeq gene 3454833 3455018 . - . ID=gene-DOLE_RS14770;Name=DOLE_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14770;old_locus_tag=Dole_2869 NC_009943.1 Protein Homology CDS 3454833 3455018 . - 0 ID=cds-WP_012176283.1;Parent=gene-DOLE_RS14770;Dbxref=Genbank:WP_012176283.1;Name=WP_012176283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877057.1;locus_tag=DOLE_RS14770;product=hypothetical protein;protein_id=WP_012176283.1;transl_table=11 NC_009943.1 RefSeq gene 3455072 3455452 . - . ID=gene-DOLE_RS14775;Name=DOLE_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14775;old_locus_tag=Dole_2870 NC_009943.1 Protein Homology CDS 3455072 3455452 . - 0 ID=cds-WP_012176284.1;Parent=gene-DOLE_RS14775;Dbxref=Genbank:WP_012176284.1;Name=WP_012176284.1;Ontology_term=GO:0019430,GO:0004784;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017866204.1;locus_tag=DOLE_RS14775;product=desulfoferrodoxin;protein_id=WP_012176284.1;transl_table=11 NC_009943.1 RefSeq gene 3455605 3458568 . - . ID=gene-DOLE_RS14780;Name=DOLE_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14780;old_locus_tag=Dole_2871 NC_009943.1 Protein Homology CDS 3455605 3458568 . - 0 ID=cds-WP_012176285.1;Parent=gene-DOLE_RS14780;Dbxref=Genbank:WP_012176285.1;Name=WP_012176285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947870.1;locus_tag=DOLE_RS14780;product=insulinase family protein;protein_id=WP_012176285.1;transl_table=11 NC_009943.1 RefSeq gene 3458625 3459005 . - . ID=gene-DOLE_RS14785;Name=DOLE_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14785;old_locus_tag=Dole_2872 NC_009943.1 Protein Homology CDS 3458625 3459005 . - 0 ID=cds-WP_012176286.1;Parent=gene-DOLE_RS14785;Dbxref=Genbank:WP_012176286.1;Name=WP_012176286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176128.1;locus_tag=DOLE_RS14785;product=hypothetical protein;protein_id=WP_012176286.1;transl_table=11 NC_009943.1 RefSeq gene 3459259 3460821 . - . ID=gene-DOLE_RS14790;Name=DOLE_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14790;old_locus_tag=Dole_2873 NC_009943.1 Protein Homology CDS 3459259 3460821 . - 0 ID=cds-WP_012176287.1;Parent=gene-DOLE_RS14790;Dbxref=Genbank:WP_012176287.1;Name=WP_012176287.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS14790;product=radical SAM protein;protein_id=WP_012176287.1;transl_table=11 NC_009943.1 RefSeq gene 3461139 3461516 . + . ID=gene-DOLE_RS14800;Name=DOLE_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14800;old_locus_tag=Dole_2874 NC_009943.1 Protein Homology CDS 3461139 3461516 . + 0 ID=cds-WP_012176288.1;Parent=gene-DOLE_RS14800;Dbxref=Genbank:WP_012176288.1;Name=WP_012176288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876354.1;locus_tag=DOLE_RS14800;product=VOC family protein;protein_id=WP_012176288.1;transl_table=11 NC_009943.1 RefSeq gene 3461635 3463281 . + . ID=gene-DOLE_RS14805;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=DOLE_RS14805;old_locus_tag=Dole_2875 NC_009943.1 Protein Homology CDS 3461635 3463281 . + 0 ID=cds-WP_012176289.1;Parent=gene-DOLE_RS14805;Dbxref=Genbank:WP_012176289.1;Name=WP_012176289.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176289.1;locus_tag=DOLE_RS14805;product=hydroxylamine reductase;protein_id=WP_012176289.1;transl_table=11 NC_009943.1 RefSeq gene 3463565 3463921 . - . ID=gene-DOLE_RS18320;Name=DOLE_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18320 NC_009943.1 GeneMarkS-2+ CDS 3463565 3463921 . - 0 ID=cds-WP_153304452.1;Parent=gene-DOLE_RS18320;Dbxref=Genbank:WP_153304452.1;Name=WP_153304452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18320;product=hypothetical protein;protein_id=WP_153304452.1;transl_table=11 NC_009943.1 RefSeq gene 3463956 3464360 . + . ID=gene-DOLE_RS14810;Name=DOLE_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14810;old_locus_tag=Dole_2876 NC_009943.1 Protein Homology CDS 3463956 3464360 . + 0 ID=cds-WP_012176290.1;Parent=gene-DOLE_RS14810;Dbxref=Genbank:WP_012176290.1;Name=WP_012176290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876458.1;locus_tag=DOLE_RS14810;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_012176290.1;transl_table=11 NC_009943.1 RefSeq gene 3464659 3465831 . + . ID=gene-DOLE_RS14815;Name=DOLE_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14815;old_locus_tag=Dole_2877 NC_009943.1 Protein Homology CDS 3464659 3465831 . + 0 ID=cds-WP_012176291.1;Parent=gene-DOLE_RS14815;Dbxref=Genbank:WP_012176291.1;Name=WP_012176291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073261.1;locus_tag=DOLE_RS14815;product=permease;protein_id=WP_012176291.1;transl_table=11 NC_009943.1 RefSeq gene 3465867 3466100 . + . ID=gene-DOLE_RS14820;Name=DOLE_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14820;old_locus_tag=Dole_2878 NC_009943.1 Protein Homology CDS 3465867 3466100 . + 0 ID=cds-WP_012176292.1;Parent=gene-DOLE_RS14820;Dbxref=Genbank:WP_012176292.1;Name=WP_012176292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967096.1;locus_tag=DOLE_RS14820;product=thioredoxin family protein;protein_id=WP_012176292.1;transl_table=11 NC_009943.1 RefSeq pseudogene 3466185 3466343 . + . ID=gene-DOLE_RS14825;Name=DOLE_RS14825;end_range=3466343,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DOLE_RS14825;old_locus_tag=Dole_2879;partial=true;pseudo=true NC_009943.1 Protein Homology CDS 3466185 3466343 . + 0 ID=cds-DOLE_RS14825;Parent=gene-DOLE_RS14825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3466343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_240162627.1;locus_tag=DOLE_RS14825;partial=true;product=(2Fe-2S)-binding protein;pseudo=true;transl_table=11 NC_009943.1 RefSeq gene 3466416 3466937 . + . ID=gene-DOLE_RS14830;Name=DOLE_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14830;old_locus_tag=Dole_2880 NC_009943.1 Protein Homology CDS 3466416 3466937 . + 0 ID=cds-WP_012176294.1;Parent=gene-DOLE_RS14830;Dbxref=Genbank:WP_012176294.1;Name=WP_012176294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949444.1;locus_tag=DOLE_RS14830;product=Fe-S cluster protein;protein_id=WP_012176294.1;transl_table=11 NC_009943.1 RefSeq gene 3466956 3467393 . + . ID=gene-DOLE_RS14835;Name=DOLE_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14835;old_locus_tag=Dole_2881 NC_009943.1 Protein Homology CDS 3466956 3467393 . + 0 ID=cds-WP_012176295.1;Parent=gene-DOLE_RS14835;Dbxref=Genbank:WP_012176295.1;Name=WP_012176295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878702.1;locus_tag=DOLE_RS14835;product=arsenate reductase ArsC;protein_id=WP_012176295.1;transl_table=11 NC_009943.1 RefSeq gene 3467409 3468599 . + . ID=gene-DOLE_RS14840;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=DOLE_RS14840;old_locus_tag=Dole_2882 NC_009943.1 Protein Homology CDS 3467409 3468599 . + 0 ID=cds-WP_012176296.1;Parent=gene-DOLE_RS14840;Dbxref=Genbank:WP_012176296.1;Name=WP_012176296.1;Ontology_term=GO:0008490;gbkey=CDS;gene=arsB;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967079.1;locus_tag=DOLE_RS14840;product=ACR3 family arsenite efflux transporter;protein_id=WP_012176296.1;transl_table=11 NC_009943.1 RefSeq gene 3468663 3469181 . + . ID=gene-DOLE_RS14845;Name=DOLE_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14845;old_locus_tag=Dole_2883 NC_009943.1 Protein Homology CDS 3468663 3469181 . + 0 ID=cds-WP_012176297.1;Parent=gene-DOLE_RS14845;Dbxref=Genbank:WP_012176297.1;Name=WP_012176297.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012790.2;locus_tag=DOLE_RS14845;product=rhodanese-like domain-containing protein;protein_id=WP_012176297.1;transl_table=11 NC_009943.1 RefSeq gene 3469171 3470094 . + . ID=gene-DOLE_RS14850;Name=DOLE_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14850;old_locus_tag=Dole_2884 NC_009943.1 Protein Homology CDS 3469171 3470094 . + 0 ID=cds-WP_012176298.1;Parent=gene-DOLE_RS14850;Dbxref=Genbank:WP_012176298.1;Name=WP_012176298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01297.1;locus_tag=DOLE_RS14850;product=cation diffusion facilitator family transporter;protein_id=WP_012176298.1;transl_table=11 NC_009943.1 RefSeq gene 3470099 3470584 . + . ID=gene-DOLE_RS14855;Name=DOLE_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14855;old_locus_tag=Dole_2885 NC_009943.1 Protein Homology CDS 3470099 3470584 . + 0 ID=cds-WP_012176299.1;Parent=gene-DOLE_RS14855;Dbxref=Genbank:WP_012176299.1;Name=WP_012176299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878705.1;locus_tag=DOLE_RS14855;product=DoxX family membrane protein;protein_id=WP_012176299.1;transl_table=11 NC_009943.1 RefSeq gene 3470581 3470982 . + . ID=gene-DOLE_RS14860;Name=DOLE_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14860;old_locus_tag=Dole_2886 NC_009943.1 Protein Homology CDS 3470581 3470982 . + 0 ID=cds-WP_012176300.1;Parent=gene-DOLE_RS14860;Dbxref=Genbank:WP_012176300.1;Name=WP_012176300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878710.1;locus_tag=DOLE_RS14860;product=thioredoxin family protein;protein_id=WP_012176300.1;transl_table=11 NC_009943.1 RefSeq gene 3470979 3471689 . + . ID=gene-DOLE_RS14865;Name=DOLE_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14865;old_locus_tag=Dole_2887 NC_009943.1 Protein Homology CDS 3470979 3471689 . + 0 ID=cds-WP_012176301.1;Parent=gene-DOLE_RS14865;Dbxref=Genbank:WP_012176301.1;Name=WP_012176301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723962.1;locus_tag=DOLE_RS14865;product=cytochrome c biosynthesis protein;protein_id=WP_012176301.1;transl_table=11 NC_009943.1 RefSeq gene 3471784 3472122 . - . ID=gene-DOLE_RS14870;Name=DOLE_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14870;old_locus_tag=Dole_2888 NC_009943.1 Protein Homology CDS 3471784 3472122 . - 0 ID=cds-WP_012176302.1;Parent=gene-DOLE_RS14870;Dbxref=Genbank:WP_012176302.1;Name=WP_012176302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015639.2;locus_tag=DOLE_RS14870;product=YkgJ family cysteine cluster protein;protein_id=WP_012176302.1;transl_table=11 NC_009943.1 RefSeq gene 3472273 3472587 . - . ID=gene-DOLE_RS18065;Name=DOLE_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18065;old_locus_tag=Dole_2889 NC_009943.1 Protein Homology CDS 3472273 3472587 . - 0 ID=cds-WP_012176303.1;Parent=gene-DOLE_RS18065;Dbxref=Genbank:WP_012176303.1;Name=WP_012176303.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964762.1;locus_tag=DOLE_RS18065;product=HigA family addiction module antitoxin;protein_id=WP_012176303.1;transl_table=11 NC_009943.1 RefSeq gene 3472599 3472877 . - . ID=gene-DOLE_RS18070;Name=DOLE_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18070;old_locus_tag=Dole_2890 NC_009943.1 Protein Homology CDS 3472599 3472877 . - 0 ID=cds-WP_012176304.1;Parent=gene-DOLE_RS18070;Dbxref=Genbank:WP_012176304.1;Name=WP_012176304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586078.1;locus_tag=DOLE_RS18070;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012176304.1;transl_table=11 NC_009943.1 RefSeq gene 3473501 3474400 . - . ID=gene-DOLE_RS14875;Name=DOLE_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14875;old_locus_tag=Dole_2891 NC_009943.1 Protein Homology CDS 3473501 3474400 . - 0 ID=cds-WP_012176305.1;Parent=gene-DOLE_RS14875;Dbxref=Genbank:WP_012176305.1;Name=WP_012176305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020586731.1;locus_tag=DOLE_RS14875;product=sulfite exporter TauE/SafE family protein;protein_id=WP_012176305.1;transl_table=11 NC_009943.1 RefSeq gene 3474572 3475255 . + . ID=gene-DOLE_RS14880;Name=DOLE_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14880;old_locus_tag=Dole_2892 NC_009943.1 Protein Homology CDS 3474572 3475255 . + 0 ID=cds-WP_012176306.1;Parent=gene-DOLE_RS14880;Dbxref=Genbank:WP_012176306.1;Name=WP_012176306.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020771.2;locus_tag=DOLE_RS14880;product=CerR family C-terminal domain-containing protein;protein_id=WP_012176306.1;transl_table=11 NC_009943.1 RefSeq gene 3475243 3476061 . + . ID=gene-DOLE_RS14885;Name=DOLE_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14885;old_locus_tag=Dole_2893 NC_009943.1 Protein Homology CDS 3475243 3476061 . + 0 ID=cds-WP_012176307.1;Parent=gene-DOLE_RS14885;Dbxref=Genbank:WP_012176307.1;Name=WP_012176307.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014635.2;locus_tag=DOLE_RS14885;product=DUF169 domain-containing protein;protein_id=WP_012176307.1;transl_table=11 NC_009943.1 RefSeq gene 3476132 3477325 . + . ID=gene-DOLE_RS14890;Name=DOLE_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14890;old_locus_tag=Dole_2894 NC_009943.1 Protein Homology CDS 3476132 3477325 . + 0 ID=cds-WP_012176308.1;Parent=gene-DOLE_RS14890;Dbxref=Genbank:WP_012176308.1;Name=WP_012176308.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967234.1;locus_tag=DOLE_RS14890;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012176308.1;transl_table=11 NC_009943.1 RefSeq gene 3477338 3480517 . + . ID=gene-DOLE_RS14895;Name=DOLE_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14895;old_locus_tag=Dole_2895 NC_009943.1 Protein Homology CDS 3477338 3480517 . + 0 ID=cds-WP_012176309.1;Parent=gene-DOLE_RS14895;Dbxref=Genbank:WP_012176309.1;Name=WP_012176309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724027.1;locus_tag=DOLE_RS14895;product=efflux RND transporter permease subunit;protein_id=WP_012176309.1;transl_table=11 NC_009943.1 RefSeq gene 3480522 3481952 . + . ID=gene-DOLE_RS14900;Name=DOLE_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14900;old_locus_tag=Dole_2896 NC_009943.1 Protein Homology CDS 3480522 3481952 . + 0 ID=cds-WP_153304531.1;Parent=gene-DOLE_RS14900;Dbxref=Genbank:WP_153304531.1;Name=WP_153304531.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875685.1;locus_tag=DOLE_RS14900;product=efflux transporter outer membrane subunit;protein_id=WP_153304531.1;transl_table=11 NC_009943.1 RefSeq gene 3481973 3482878 . + . ID=gene-DOLE_RS14905;Name=DOLE_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14905;old_locus_tag=Dole_2897 NC_009943.1 Protein Homology CDS 3481973 3482878 . + 0 ID=cds-WP_012176311.1;Parent=gene-DOLE_RS14905;Dbxref=Genbank:WP_012176311.1;Name=WP_012176311.1;Ontology_term=GO:0006629,GO:0004620,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF014324.2;locus_tag=DOLE_RS14905;product=phospholipase A;protein_id=WP_012176311.1;transl_table=11 NC_009943.1 RefSeq gene 3483494 3484780 . + . ID=gene-DOLE_RS14910;Name=DOLE_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14910;old_locus_tag=Dole_2898 NC_009943.1 Protein Homology CDS 3483494 3484780 . + 0 ID=cds-WP_012176312.1;Parent=gene-DOLE_RS14910;Dbxref=Genbank:WP_012176312.1;Name=WP_012176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176313.1;locus_tag=DOLE_RS14910;product=ankyrin repeat domain-containing protein;protein_id=WP_012176312.1;transl_table=11 NC_009943.1 RefSeq gene 3484989 3486179 . + . ID=gene-DOLE_RS18075;Name=DOLE_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18075;old_locus_tag=Dole_2899 NC_009943.1 Protein Homology CDS 3484989 3486179 . + 0 ID=cds-WP_153304532.1;Parent=gene-DOLE_RS18075;Dbxref=Genbank:WP_153304532.1;Name=WP_153304532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012862.2;locus_tag=DOLE_RS18075;product=ankyrin repeat domain-containing protein;protein_id=WP_153304532.1;transl_table=11 NC_009943.1 RefSeq gene 3486197 3487579 . + . ID=gene-DOLE_RS14920;Name=DOLE_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14920;old_locus_tag=Dole_2900 NC_009943.1 Protein Homology CDS 3486197 3487579 . + 0 ID=cds-WP_041280613.1;Parent=gene-DOLE_RS14920;Dbxref=Genbank:WP_041280613.1;Name=WP_041280613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012862.2;locus_tag=DOLE_RS14920;product=ankyrin repeat domain-containing protein;protein_id=WP_041280613.1;transl_table=11 NC_009943.1 RefSeq gene 3487607 3488431 . + . ID=gene-DOLE_RS14925;Name=DOLE_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14925;old_locus_tag=Dole_2901 NC_009943.1 Protein Homology CDS 3487607 3488431 . + 0 ID=cds-WP_012176315.1;Parent=gene-DOLE_RS14925;Dbxref=Genbank:WP_012176315.1;Name=WP_012176315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025684.2;locus_tag=DOLE_RS14925;product=DUF4384 domain-containing protein;protein_id=WP_012176315.1;transl_table=11 NC_009943.1 RefSeq gene 3488449 3488922 . + . ID=gene-DOLE_RS14930;Name=DOLE_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14930;old_locus_tag=Dole_2902 NC_009943.1 Protein Homology CDS 3488449 3488922 . + 0 ID=cds-WP_012176316.1;Parent=gene-DOLE_RS14930;Dbxref=Genbank:WP_012176316.1;Name=WP_012176316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012601.2;locus_tag=DOLE_RS14930;product=nucleoside deaminase;protein_id=WP_012176316.1;transl_table=11 NC_009943.1 RefSeq gene 3489235 3490743 . + . ID=gene-DOLE_RS14935;Name=DOLE_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14935;old_locus_tag=Dole_2903 NC_009943.1 Protein Homology CDS 3489235 3490743 . + 0 ID=cds-WP_012176317.1;Parent=gene-DOLE_RS14935;Dbxref=Genbank:WP_012176317.1;Name=WP_012176317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173470.1;locus_tag=DOLE_RS14935;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012176317.1;transl_table=11 NC_009943.1 RefSeq gene 3490762 3491904 . + . ID=gene-DOLE_RS14940;Name=DOLE_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14940;old_locus_tag=Dole_2904 NC_009943.1 Protein Homology CDS 3490762 3491904 . + 0 ID=cds-WP_012176318.1;Parent=gene-DOLE_RS14940;Dbxref=Genbank:WP_012176318.1;Name=WP_012176318.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948572.1;locus_tag=DOLE_RS14940;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012176318.1;transl_table=11 NC_009943.1 RefSeq gene 3492082 3492969 . + . ID=gene-DOLE_RS14945;Name=DOLE_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14945;old_locus_tag=Dole_2905 NC_009943.1 Protein Homology CDS 3492082 3492969 . + 0 ID=cds-WP_012176319.1;Parent=gene-DOLE_RS14945;Dbxref=Genbank:WP_012176319.1;Name=WP_012176319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949149.1;locus_tag=DOLE_RS14945;product=alpha/beta fold hydrolase;protein_id=WP_012176319.1;transl_table=11 NC_009943.1 RefSeq gene 3493320 3493395 . + . ID=gene-DOLE_RS14950;Name=DOLE_RS14950;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS14950;old_locus_tag=Dole_R0047 NC_009943.1 tRNAscan-SE tRNA 3493320 3493395 . + . ID=rna-DOLE_RS14950;Parent=gene-DOLE_RS14950;anticodon=(pos:3493353..3493355);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS14950;product=tRNA-Ala NC_009943.1 tRNAscan-SE exon 3493320 3493395 . + . ID=exon-DOLE_RS14950-1;Parent=rna-DOLE_RS14950;anticodon=(pos:3493353..3493355);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS14950;product=tRNA-Ala NC_009943.1 RefSeq gene 3493451 3494524 . - . ID=gene-DOLE_RS14955;Name=DOLE_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14955;old_locus_tag=Dole_2906 NC_009943.1 Protein Homology CDS 3493451 3494524 . - 0 ID=cds-WP_012176320.1;Parent=gene-DOLE_RS14955;Dbxref=Genbank:WP_012176320.1;Name=WP_012176320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588945.1;locus_tag=DOLE_RS14955;product=site-specific integrase;protein_id=WP_012176320.1;transl_table=11 NC_009943.1 RefSeq gene 3494906 3495424 . + . ID=gene-DOLE_RS14960;Name=DOLE_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14960;old_locus_tag=Dole_2907 NC_009943.1 GeneMarkS-2+ CDS 3494906 3495424 . + 0 ID=cds-WP_041280615.1;Parent=gene-DOLE_RS14960;Dbxref=Genbank:WP_041280615.1;Name=WP_041280615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14960;product=hypothetical protein;protein_id=WP_041280615.1;transl_table=11 NC_009943.1 RefSeq gene 3495421 3496332 . + . ID=gene-DOLE_RS14965;Name=DOLE_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14965;old_locus_tag=Dole_2908 NC_009943.1 GeneMarkS-2+ CDS 3495421 3496332 . + 0 ID=cds-WP_012176322.1;Parent=gene-DOLE_RS14965;Dbxref=Genbank:WP_012176322.1;Name=WP_012176322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14965;product=hypothetical protein;protein_id=WP_012176322.1;transl_table=11 NC_009943.1 RefSeq gene 3496626 3497768 . + . ID=gene-DOLE_RS14970;Name=DOLE_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14970;old_locus_tag=Dole_2909 NC_009943.1 GeneMarkS-2+ CDS 3496626 3497768 . + 0 ID=cds-WP_012176323.1;Parent=gene-DOLE_RS14970;Dbxref=Genbank:WP_012176323.1;Name=WP_012176323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14970;product=hypothetical protein;protein_id=WP_012176323.1;transl_table=11 NC_009943.1 RefSeq gene 3497834 3498718 . + . ID=gene-DOLE_RS14975;Name=DOLE_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14975 NC_009943.1 GeneMarkS-2+ CDS 3497834 3498718 . + 0 ID=cds-WP_041280617.1;Parent=gene-DOLE_RS14975;Dbxref=Genbank:WP_041280617.1;Name=WP_041280617.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14975;product=hypothetical protein;protein_id=WP_041280617.1;transl_table=11 NC_009943.1 RefSeq gene 3499120 3501429 . + . ID=gene-DOLE_RS14980;Name=DOLE_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14980;old_locus_tag=Dole_2911 NC_009943.1 Protein Homology CDS 3499120 3501429 . + 0 ID=cds-WP_012176325.1;Parent=gene-DOLE_RS14980;Dbxref=Genbank:WP_012176325.1;Name=WP_012176325.1;Ontology_term=GO:0006260,GO:0003896;gbkey=CDS;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR01613.1;locus_tag=DOLE_RS14980;product=phage/plasmid primase%2C P4 family;protein_id=WP_012176325.1;transl_table=11 NC_009943.1 RefSeq gene 3501931 3502155 . + . ID=gene-DOLE_RS14985;Name=DOLE_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14985;old_locus_tag=Dole_2912 NC_009943.1 GeneMarkS-2+ CDS 3501931 3502155 . + 0 ID=cds-WP_041280618.1;Parent=gene-DOLE_RS14985;Dbxref=Genbank:WP_041280618.1;Name=WP_041280618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14985;product=hypothetical protein;protein_id=WP_041280618.1;transl_table=11 NC_009943.1 RefSeq gene 3502213 3502476 . - . ID=gene-DOLE_RS14990;Name=DOLE_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14990;old_locus_tag=Dole_2913 NC_009943.1 GeneMarkS-2+ CDS 3502213 3502476 . - 0 ID=cds-WP_012176327.1;Parent=gene-DOLE_RS14990;Dbxref=Genbank:WP_012176327.1;Name=WP_012176327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14990;product=hypothetical protein;protein_id=WP_012176327.1;transl_table=11 NC_009943.1 RefSeq gene 3502457 3502921 . - . ID=gene-DOLE_RS14995;Name=DOLE_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS14995;old_locus_tag=Dole_2914 NC_009943.1 GeneMarkS-2+ CDS 3502457 3502921 . - 0 ID=cds-WP_012176328.1;Parent=gene-DOLE_RS14995;Dbxref=Genbank:WP_012176328.1;Name=WP_012176328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS14995;product=hypothetical protein;protein_id=WP_012176328.1;transl_table=11 NC_009943.1 RefSeq gene 3502933 3503133 . - . ID=gene-DOLE_RS15000;Name=DOLE_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15000;old_locus_tag=Dole_2915 NC_009943.1 Protein Homology CDS 3502933 3503133 . - 0 ID=cds-WP_041280619.1;Parent=gene-DOLE_RS15000;Dbxref=Genbank:WP_041280619.1;Name=WP_041280619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967508.1;locus_tag=DOLE_RS15000;product=hypothetical protein;protein_id=WP_041280619.1;transl_table=11 NC_009943.1 RefSeq gene 3503163 3503666 . - . ID=gene-DOLE_RS15005;Name=DOLE_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15005;old_locus_tag=Dole_2916 NC_009943.1 Protein Homology CDS 3503163 3503666 . - 0 ID=cds-WP_012176330.1;Parent=gene-DOLE_RS15005;Dbxref=Genbank:WP_012176330.1;Name=WP_012176330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015935.2;locus_tag=DOLE_RS15005;product=DNA repair protein RadC;protein_id=WP_012176330.1;transl_table=11 NC_009943.1 RefSeq gene 3503677 3504603 . - . ID=gene-DOLE_RS15010;Name=DOLE_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15010;old_locus_tag=Dole_2917 NC_009943.1 Protein Homology CDS 3503677 3504603 . - 0 ID=cds-WP_012176331.1;Parent=gene-DOLE_RS15010;Dbxref=Genbank:WP_012176331.1;Name=WP_012176331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610484.1;locus_tag=DOLE_RS15010;product=DUF932 domain-containing protein;protein_id=WP_012176331.1;transl_table=11 NC_009943.1 RefSeq gene 3504732 3505295 . - . ID=gene-DOLE_RS15015;Name=DOLE_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15015;old_locus_tag=Dole_2918 NC_009943.1 GeneMarkS-2+ CDS 3504732 3505295 . - 0 ID=cds-WP_012176332.1;Parent=gene-DOLE_RS15015;Dbxref=Genbank:WP_012176332.1;Name=WP_012176332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15015;product=hypothetical protein;protein_id=WP_012176332.1;transl_table=11 NC_009943.1 RefSeq gene 3505433 3507298 . - . ID=gene-DOLE_RS15020;Name=DOLE_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15020;old_locus_tag=Dole_2919 NC_009943.1 Protein Homology CDS 3505433 3507298 . - 0 ID=cds-WP_012176333.1;Parent=gene-DOLE_RS15020;Dbxref=Genbank:WP_012176333.1;Name=WP_012176333.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF024754.2;locus_tag=DOLE_RS15020;product=UvrD-helicase domain-containing protein;protein_id=WP_012176333.1;transl_table=11 NC_009943.1 RefSeq gene 3507295 3507588 . - . ID=gene-DOLE_RS15025;Name=DOLE_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15025;old_locus_tag=Dole_2920 NC_009943.1 GeneMarkS-2+ CDS 3507295 3507588 . - 0 ID=cds-WP_012176334.1;Parent=gene-DOLE_RS15025;Dbxref=Genbank:WP_012176334.1;Name=WP_012176334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15025;product=hypothetical protein;protein_id=WP_012176334.1;transl_table=11 NC_009943.1 RefSeq gene 3507569 3508393 . - . ID=gene-DOLE_RS15030;Name=DOLE_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15030;old_locus_tag=Dole_2921 NC_009943.1 Protein Homology CDS 3507569 3508393 . - 0 ID=cds-WP_012176335.1;Parent=gene-DOLE_RS15030;Dbxref=Genbank:WP_012176335.1;Name=WP_012176335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024117.2;locus_tag=DOLE_RS15030;product=PD-(D/E)XK nuclease family protein;protein_id=WP_012176335.1;transl_table=11 NC_009943.1 RefSeq gene 3508490 3509455 . - . ID=gene-DOLE_RS17620;Name=DOLE_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17620;old_locus_tag=Dole_2922 NC_009943.1 GeneMarkS-2+ CDS 3508490 3509455 . - 0 ID=cds-WP_012176336.1;Parent=gene-DOLE_RS17620;Dbxref=Genbank:WP_012176336.1;Name=WP_012176336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17620;product=SWIM zinc finger domain-containing protein;protein_id=WP_012176336.1;transl_table=11 NC_009943.1 RefSeq gene 3509424 3509555 . - . ID=gene-DOLE_RS18695;Name=DOLE_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18695 NC_009943.1 GeneMarkS-2+ CDS 3509424 3509555 . - 0 ID=cds-WP_269719149.1;Parent=gene-DOLE_RS18695;Dbxref=Genbank:WP_269719149.1;Name=WP_269719149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18695;product=hypothetical protein;protein_id=WP_269719149.1;transl_table=11 NC_009943.1 RefSeq gene 3509568 3509930 . - . ID=gene-DOLE_RS15040;Name=DOLE_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15040;old_locus_tag=Dole_2923 NC_009943.1 Protein Homology CDS 3509568 3509930 . - 0 ID=cds-WP_012176337.1;Parent=gene-DOLE_RS15040;Dbxref=Genbank:WP_012176337.1;Name=WP_012176337.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00621.2;locus_tag=DOLE_RS15040;product=single-stranded DNA-binding protein;protein_id=WP_012176337.1;transl_table=11 NC_009943.1 RefSeq gene 3510163 3510423 . + . ID=gene-DOLE_RS15045;Name=DOLE_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15045;old_locus_tag=Dole_2924 NC_009943.1 GeneMarkS-2+ CDS 3510163 3510423 . + 0 ID=cds-WP_012176338.1;Parent=gene-DOLE_RS15045;Dbxref=Genbank:WP_012176338.1;Name=WP_012176338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15045;product=hypothetical protein;protein_id=WP_012176338.1;transl_table=11 NC_009943.1 RefSeq gene 3510579 3512621 . + . ID=gene-DOLE_RS15050;Name=DOLE_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15050;old_locus_tag=Dole_2925 NC_009943.1 Protein Homology CDS 3510579 3512621 . + 0 ID=cds-WP_012176339.1;Parent=gene-DOLE_RS15050;Dbxref=Genbank:WP_012176339.1;Name=WP_012176339.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=DOLE_RS15050;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_012176339.1;transl_table=11 NC_009943.1 RefSeq gene 3512623 3513927 . + . ID=gene-DOLE_RS15055;Name=DOLE_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15055;old_locus_tag=Dole_2926 NC_009943.1 Protein Homology CDS 3512623 3513927 . + 0 ID=cds-WP_012176340.1;Parent=gene-DOLE_RS15055;Dbxref=Genbank:WP_012176340.1;Name=WP_012176340.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=DOLE_RS15055;product=restriction endonuclease subunit S;protein_id=WP_012176340.1;transl_table=11 NC_009943.1 RefSeq gene 3513931 3516993 . + . ID=gene-DOLE_RS15060;Name=DOLE_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15060;old_locus_tag=Dole_2927 NC_009943.1 Protein Homology CDS 3513931 3516993 . + 0 ID=cds-WP_012176341.1;Parent=gene-DOLE_RS15060;Dbxref=Genbank:WP_012176341.1;Name=WP_012176341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00348.1;locus_tag=DOLE_RS15060;product=type I restriction endonuclease subunit R;protein_id=WP_012176341.1;transl_table=11 NC_009943.1 RefSeq gene 3516993 3517649 . + . ID=gene-DOLE_RS15065;Name=DOLE_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15065;old_locus_tag=Dole_2928 NC_009943.1 Protein Homology CDS 3516993 3517649 . + 0 ID=cds-WP_153304453.1;Parent=gene-DOLE_RS15065;Dbxref=Genbank:WP_153304453.1;Name=WP_153304453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013980.2;locus_tag=DOLE_RS15065;product=SprT family zinc-dependent metalloprotease;protein_id=WP_153304453.1;transl_table=11 NC_009943.1 RefSeq gene 3517786 3518991 . - . ID=gene-DOLE_RS15070;Name=DOLE_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15070;old_locus_tag=Dole_2929 NC_009943.1 GeneMarkS-2+ CDS 3517786 3518991 . - 0 ID=cds-WP_012176343.1;Parent=gene-DOLE_RS15070;Dbxref=Genbank:WP_012176343.1;Name=WP_012176343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15070;product=hypothetical protein;protein_id=WP_012176343.1;transl_table=11 NC_009943.1 RefSeq gene 3518996 3524839 . - . ID=gene-DOLE_RS15075;Name=DOLE_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15075;old_locus_tag=Dole_2930 NC_009943.1 Protein Homology CDS 3518996 3524839 . - 0 ID=cds-WP_041280621.1;Parent=gene-DOLE_RS15075;Dbxref=Genbank:WP_041280621.1;Name=WP_041280621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024793.2;locus_tag=DOLE_RS15075;product=ATP-binding protein;protein_id=WP_041280621.1;transl_table=11 NC_009943.1 RefSeq gene 3524887 3525639 . - . ID=gene-DOLE_RS15080;Name=DOLE_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15080;old_locus_tag=Dole_2931 NC_009943.1 GeneMarkS-2+ CDS 3524887 3525639 . - 0 ID=cds-WP_012176345.1;Parent=gene-DOLE_RS15080;Dbxref=Genbank:WP_012176345.1;Name=WP_012176345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15080;product=hypothetical protein;protein_id=WP_012176345.1;transl_table=11 NC_009943.1 RefSeq gene 3525957 3526691 . - . ID=gene-DOLE_RS15085;Name=DOLE_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15085;old_locus_tag=Dole_2932 NC_009943.1 Protein Homology CDS 3525957 3526691 . - 0 ID=cds-WP_012176346.1;Parent=gene-DOLE_RS15085;Dbxref=Genbank:WP_012176346.1;Name=WP_012176346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967482.1;locus_tag=DOLE_RS15085;product=thermonuclease family protein;protein_id=WP_012176346.1;transl_table=11 NC_009943.1 RefSeq gene 3526849 3528018 . - . ID=gene-DOLE_RS17625;Name=DOLE_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17625;old_locus_tag=Dole_2933 NC_009943.1 Protein Homology CDS 3526849 3528018 . - 0 ID=cds-WP_012176347.1;Parent=gene-DOLE_RS17625;Dbxref=Genbank:WP_012176347.1;Name=WP_012176347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014825.2;locus_tag=DOLE_RS17625;product=SEC-C domain-containing protein;protein_id=WP_012176347.1;transl_table=11 NC_009943.1 RefSeq gene 3528143 3528679 . - . ID=gene-DOLE_RS15095;Name=DOLE_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15095 NC_009943.1 GeneMarkS-2+ CDS 3528143 3528679 . - 0 ID=cds-WP_041280622.1;Parent=gene-DOLE_RS15095;Dbxref=Genbank:WP_041280622.1;Name=WP_041280622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15095;product=hypothetical protein;protein_id=WP_041280622.1;transl_table=11 NC_009943.1 RefSeq gene 3528729 3529097 . - . ID=gene-DOLE_RS17630;Name=DOLE_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17630;old_locus_tag=Dole_2934 NC_009943.1 GeneMarkS-2+ CDS 3528729 3529097 . - 0 ID=cds-WP_052294313.1;Parent=gene-DOLE_RS17630;Dbxref=Genbank:WP_052294313.1;Name=WP_052294313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17630;product=hypothetical protein;protein_id=WP_052294313.1;transl_table=11 NC_009943.1 RefSeq gene 3529097 3529582 . - . ID=gene-DOLE_RS15105;Name=DOLE_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15105;old_locus_tag=Dole_2935 NC_009943.1 Protein Homology CDS 3529097 3529582 . - 0 ID=cds-WP_012176349.1;Parent=gene-DOLE_RS15105;Dbxref=Genbank:WP_012176349.1;Name=WP_012176349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176135.1;locus_tag=DOLE_RS15105;product=putative molybdenum carrier protein;protein_id=WP_012176349.1;transl_table=11 NC_009943.1 RefSeq gene 3529858 3532356 . + . ID=gene-DOLE_RS15110;Name=DOLE_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15110;old_locus_tag=Dole_2936 NC_009943.1 GeneMarkS-2+ CDS 3529858 3532356 . + 0 ID=cds-WP_012176350.1;Parent=gene-DOLE_RS15110;Dbxref=Genbank:WP_012176350.1;Name=WP_012176350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15110;product=hypothetical protein;protein_id=WP_012176350.1;transl_table=11 NC_009943.1 RefSeq gene 3532380 3533195 . + . ID=gene-DOLE_RS15115;Name=DOLE_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15115;old_locus_tag=Dole_2937 NC_009943.1 GeneMarkS-2+ CDS 3532380 3533195 . + 0 ID=cds-WP_012176351.1;Parent=gene-DOLE_RS15115;Dbxref=Genbank:WP_012176351.1;Name=WP_012176351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15115;product=hypothetical protein;protein_id=WP_012176351.1;transl_table=11 NC_009943.1 RefSeq gene 3533219 3533905 . + . ID=gene-DOLE_RS15120;Name=DOLE_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15120;old_locus_tag=Dole_2938 NC_009943.1 Protein Homology CDS 3533219 3533905 . + 0 ID=cds-WP_041280623.1;Parent=gene-DOLE_RS15120;Dbxref=Genbank:WP_041280623.1;Name=WP_041280623.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02098.1;locus_tag=DOLE_RS15120;product=hypothetical protein;protein_id=WP_041280623.1;transl_table=11 NC_009943.1 RefSeq gene 3533928 3534713 . - . ID=gene-DOLE_RS15125;Name=DOLE_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15125;old_locus_tag=Dole_2939 NC_009943.1 GeneMarkS-2+ CDS 3533928 3534713 . - 0 ID=cds-WP_012176353.1;Parent=gene-DOLE_RS15125;Dbxref=Genbank:WP_012176353.1;Name=WP_012176353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15125;product=hypothetical protein;protein_id=WP_012176353.1;transl_table=11 NC_009943.1 RefSeq gene 3534753 3534953 . - . ID=gene-DOLE_RS15130;Name=DOLE_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15130;old_locus_tag=Dole_2940 NC_009943.1 GeneMarkS-2+ CDS 3534753 3534953 . - 0 ID=cds-WP_012176354.1;Parent=gene-DOLE_RS15130;Dbxref=Genbank:WP_012176354.1;Name=WP_012176354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15130;product=hypothetical protein;protein_id=WP_012176354.1;transl_table=11 NC_009943.1 RefSeq gene 3535211 3535519 . - . ID=gene-DOLE_RS15135;Name=DOLE_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15135;old_locus_tag=Dole_2942 NC_009943.1 Protein Homology CDS 3535211 3535519 . - 0 ID=cds-WP_012176356.1;Parent=gene-DOLE_RS15135;Dbxref=Genbank:WP_012176356.1;Name=WP_012176356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174678.1;locus_tag=DOLE_RS15135;product=PQ-loop repeat-containing protein;protein_id=WP_012176356.1;transl_table=11 NC_009943.1 RefSeq gene 3535535 3535810 . - . ID=gene-DOLE_RS15140;Name=DOLE_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15140;old_locus_tag=Dole_2943 NC_009943.1 Protein Homology CDS 3535535 3535810 . - 0 ID=cds-WP_232362714.1;Parent=gene-DOLE_RS15140;Dbxref=Genbank:WP_232362714.1;Name=WP_232362714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174676.1;locus_tag=DOLE_RS15140;product=DUF1232 domain-containing protein;protein_id=WP_232362714.1;transl_table=11 NC_009943.1 RefSeq gene 3536619 3537887 . + . ID=gene-DOLE_RS15145;Name=DOLE_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15145;old_locus_tag=Dole_2944 NC_009943.1 GeneMarkS-2+ CDS 3536619 3537887 . + 0 ID=cds-WP_012176358.1;Parent=gene-DOLE_RS15145;Dbxref=Genbank:WP_012176358.1;Name=WP_012176358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15145;product=hypothetical protein;protein_id=WP_012176358.1;transl_table=11 NC_009943.1 RefSeq gene 3538376 3538858 . + . ID=gene-DOLE_RS15150;Name=DOLE_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15150;old_locus_tag=Dole_2945 NC_009943.1 GeneMarkS-2+ CDS 3538376 3538858 . + 0 ID=cds-WP_041280625.1;Parent=gene-DOLE_RS15150;Dbxref=Genbank:WP_041280625.1;Name=WP_041280625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15150;product=hypothetical protein;protein_id=WP_041280625.1;transl_table=11 NC_009943.1 RefSeq gene 3538855 3539694 . + . ID=gene-DOLE_RS15155;Name=DOLE_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15155;old_locus_tag=Dole_2946 NC_009943.1 Protein Homology CDS 3538855 3539694 . + 0 ID=cds-WP_012176360.1;Parent=gene-DOLE_RS15155;Dbxref=Genbank:WP_012176360.1;Name=WP_012176360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021143.2;locus_tag=DOLE_RS15155;product=FISUMP domain-containing protein;protein_id=WP_012176360.1;transl_table=11 NC_009943.1 RefSeq gene 3539975 3541375 . + . ID=gene-DOLE_RS17635;Name=DOLE_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17635;old_locus_tag=Dole_2947 NC_009943.1 Protein Homology CDS 3539975 3541375 . + 0 ID=cds-WP_012176361.1;Parent=gene-DOLE_RS17635;Dbxref=Genbank:WP_012176361.1;Name=WP_012176361.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF020123.2;locus_tag=DOLE_RS17635;product=redoxin domain-containing protein;protein_id=WP_012176361.1;transl_table=11 NC_009943.1 RefSeq gene 3542127 3543167 . - . ID=gene-DOLE_RS17640;Name=DOLE_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17640;old_locus_tag=Dole_2948 NC_009943.1 GeneMarkS-2+ CDS 3542127 3543167 . - 0 ID=cds-WP_052294315.1;Parent=gene-DOLE_RS17640;Dbxref=Genbank:WP_052294315.1;Name=WP_052294315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17640;product=hypothetical protein;protein_id=WP_052294315.1;transl_table=11 NC_009943.1 RefSeq gene 3543456 3543944 . + . ID=gene-DOLE_RS17645;Name=DOLE_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17645;old_locus_tag=Dole_2949 NC_009943.1 Protein Homology CDS 3543456 3543944 . + 0 ID=cds-WP_012176363.1;Parent=gene-DOLE_RS17645;Dbxref=Genbank:WP_012176363.1;Name=WP_012176363.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026080.2;locus_tag=DOLE_RS17645;product=DUF4468 domain-containing protein;protein_id=WP_012176363.1;transl_table=11 NC_009943.1 RefSeq gene 3544142 3544390 . - . ID=gene-DOLE_RS15180;Name=DOLE_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15180;old_locus_tag=Dole_2950 NC_009943.1 GeneMarkS-2+ CDS 3544142 3544390 . - 0 ID=cds-WP_012176364.1;Parent=gene-DOLE_RS15180;Dbxref=Genbank:WP_012176364.1;Name=WP_012176364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15180;product=hypothetical protein;protein_id=WP_012176364.1;transl_table=11 NC_009943.1 RefSeq gene 3544383 3544571 . - . ID=gene-DOLE_RS15185;Name=DOLE_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15185 NC_009943.1 GeneMarkS-2+ CDS 3544383 3544571 . - 0 ID=cds-WP_041280627.1;Parent=gene-DOLE_RS15185;Dbxref=Genbank:WP_041280627.1;Name=WP_041280627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15185;product=hypothetical protein;protein_id=WP_041280627.1;transl_table=11 NC_009943.1 RefSeq gene 3544558 3544848 . - . ID=gene-DOLE_RS15190;Name=DOLE_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15190;old_locus_tag=Dole_2951 NC_009943.1 GeneMarkS-2+ CDS 3544558 3544848 . - 0 ID=cds-WP_012176365.1;Parent=gene-DOLE_RS15190;Dbxref=Genbank:WP_012176365.1;Name=WP_012176365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15190;product=hypothetical protein;protein_id=WP_012176365.1;transl_table=11 NC_009943.1 RefSeq gene 3545171 3545587 . - . ID=gene-DOLE_RS15195;Name=DOLE_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15195;old_locus_tag=Dole_2952 NC_009943.1 GeneMarkS-2+ CDS 3545171 3545587 . - 0 ID=cds-WP_012176366.1;Parent=gene-DOLE_RS15195;Dbxref=Genbank:WP_012176366.1;Name=WP_012176366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15195;product=hypothetical protein;protein_id=WP_012176366.1;transl_table=11 NC_009943.1 RefSeq gene 3545622 3545897 . - . ID=gene-DOLE_RS15200;Name=DOLE_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15200;old_locus_tag=Dole_2953 NC_009943.1 GeneMarkS-2+ CDS 3545622 3545897 . - 0 ID=cds-WP_012176367.1;Parent=gene-DOLE_RS15200;Dbxref=Genbank:WP_012176367.1;Name=WP_012176367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15200;product=hypothetical protein;protein_id=WP_012176367.1;transl_table=11 NC_009943.1 RefSeq gene 3546205 3547434 . - . ID=gene-DOLE_RS15205;Name=DOLE_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15205;old_locus_tag=Dole_2954 NC_009943.1 Protein Homology CDS 3546205 3547434 . - 0 ID=cds-WP_012176368.1;Parent=gene-DOLE_RS15205;Dbxref=Genbank:WP_012176368.1;Name=WP_012176368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=DOLE_RS15205;product=site-specific integrase;protein_id=WP_012176368.1;transl_table=11 NC_009943.1 RefSeq gene 3548099 3549349 . + . ID=gene-DOLE_RS15210;Name=DOLE_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15210;old_locus_tag=Dole_2955 NC_009943.1 Protein Homology CDS 3548099 3549349 . + 0 ID=cds-WP_012176369.1;Parent=gene-DOLE_RS15210;Dbxref=Genbank:WP_012176369.1;Name=WP_012176369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=DOLE_RS15210;product=ATP-binding protein;protein_id=WP_012176369.1;transl_table=11 NC_009943.1 RefSeq gene 3549531 3550562 . - . ID=gene-DOLE_RS15215;Name=DOLE_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15215;old_locus_tag=Dole_2956 NC_009943.1 Protein Homology CDS 3549531 3550562 . - 0 ID=cds-WP_012176370.1;Parent=gene-DOLE_RS15215;Dbxref=Genbank:WP_012176370.1;Name=WP_012176370.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024039.2;locus_tag=DOLE_RS15215;product=AraC family transcriptional regulator;protein_id=WP_012176370.1;transl_table=11 NC_009943.1 RefSeq gene 3550703 3551878 . + . ID=gene-DOLE_RS15220;Name=DOLE_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15220;old_locus_tag=Dole_2957 NC_009943.1 Protein Homology CDS 3550703 3551878 . + 0 ID=cds-WP_167320889.1;Parent=gene-DOLE_RS15220;Dbxref=Genbank:WP_167320889.1;Name=WP_167320889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013381.2;locus_tag=DOLE_RS15220;product=hypothetical protein;protein_id=WP_167320889.1;transl_table=11 NC_009943.1 RefSeq gene 3551923 3552573 . + . ID=gene-DOLE_RS15225;Name=DOLE_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15225;old_locus_tag=Dole_2958 NC_009943.1 Protein Homology CDS 3551923 3552573 . + 0 ID=cds-WP_012176372.1;Parent=gene-DOLE_RS15225;Dbxref=Genbank:WP_012176372.1;Name=WP_012176372.1;Note=Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself%2C in one of its several forms%2C or in some unusual lineages%2C dependence on a cobalamin-like analog.;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014375.2;locus_tag=DOLE_RS15225;product=cobalamin-dependent protein;protein_id=WP_012176372.1;transl_table=11 NC_009943.1 RefSeq gene 3552590 3553585 . - . ID=gene-DOLE_RS15230;Name=DOLE_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15230;old_locus_tag=Dole_2959 NC_009943.1 GeneMarkS-2+ CDS 3552590 3553585 . - 0 ID=cds-WP_012176373.1;Parent=gene-DOLE_RS15230;Dbxref=Genbank:WP_012176373.1;Name=WP_012176373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15230;product=hypothetical protein;protein_id=WP_012176373.1;transl_table=11 NC_009943.1 RefSeq gene 3553599 3554888 . - . ID=gene-DOLE_RS15235;Name=DOLE_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15235;old_locus_tag=Dole_2960 NC_009943.1 GeneMarkS-2+ CDS 3553599 3554888 . - 0 ID=cds-WP_012176374.1;Parent=gene-DOLE_RS15235;Dbxref=Genbank:WP_012176374.1;Name=WP_012176374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15235;product=hypothetical protein;protein_id=WP_012176374.1;transl_table=11 NC_009943.1 RefSeq gene 3555005 3556333 . - . ID=gene-DOLE_RS15240;Name=DOLE_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15240;old_locus_tag=Dole_2961 NC_009943.1 Protein Homology CDS 3555005 3556333 . - 0 ID=cds-WP_012176375.1;Parent=gene-DOLE_RS15240;Dbxref=Genbank:WP_012176375.1;Name=WP_012176375.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004070593.1;locus_tag=DOLE_RS15240;product=PhoH family protein;protein_id=WP_012176375.1;transl_table=11 NC_009943.1 RefSeq gene 3556405 3557157 . - . ID=gene-DOLE_RS15245;Name=DOLE_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15245;old_locus_tag=Dole_2962 NC_009943.1 Protein Homology CDS 3556405 3557157 . - 0 ID=cds-WP_012176376.1;Parent=gene-DOLE_RS15245;Dbxref=Genbank:WP_012176376.1;Name=WP_012176376.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014961.2;locus_tag=DOLE_RS15245;product=vitamin B12 dependent methionine synthase activation region;protein_id=WP_012176376.1;transl_table=11 NC_009943.1 RefSeq gene 3557580 3558689 . - . ID=gene-DOLE_RS15250;Name=DOLE_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15250;old_locus_tag=Dole_2963 NC_009943.1 Protein Homology CDS 3557580 3558689 . - 0 ID=cds-WP_012176377.1;Parent=gene-DOLE_RS15250;Dbxref=Genbank:WP_012176377.1;Name=WP_012176377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013381.2;locus_tag=DOLE_RS15250;product=hypothetical protein;protein_id=WP_012176377.1;transl_table=11 NC_009943.1 RefSeq gene 3558686 3559357 . - . ID=gene-DOLE_RS15255;Name=DOLE_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15255;old_locus_tag=Dole_2964 NC_009943.1 Protein Homology CDS 3558686 3559357 . - 0 ID=cds-WP_012176378.1;Parent=gene-DOLE_RS15255;Dbxref=Genbank:WP_012176378.1;Name=WP_012176378.1;Note=Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself%2C in one of its several forms%2C or in some unusual lineages%2C dependence on a cobalamin-like analog.;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014375.2;locus_tag=DOLE_RS15255;product=cobalamin-dependent protein;protein_id=WP_012176378.1;transl_table=11 NC_009943.1 RefSeq gene 3559414 3560088 . - . ID=gene-DOLE_RS17650;Name=DOLE_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17650;old_locus_tag=Dole_2965 NC_009943.1 Protein Homology CDS 3559414 3560088 . - 0 ID=cds-WP_012176379.1;Parent=gene-DOLE_RS17650;Dbxref=Genbank:WP_012176379.1;Name=WP_012176379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS17650;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012176379.1;transl_table=11 NC_009943.1 RefSeq gene 3560259 3560396 . - . ID=gene-DOLE_RS18325;Name=DOLE_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18325 NC_009943.1 GeneMarkS-2+ CDS 3560259 3560396 . - 0 ID=cds-WP_153304455.1;Parent=gene-DOLE_RS18325;Dbxref=Genbank:WP_153304455.1;Name=WP_153304455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18325;product=hypothetical protein;protein_id=WP_153304455.1;transl_table=11 NC_009943.1 RefSeq gene 3560426 3561016 . - . ID=gene-DOLE_RS15265;Name=DOLE_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15265;old_locus_tag=Dole_2966 NC_009943.1 GeneMarkS-2+ CDS 3560426 3561016 . - 0 ID=cds-WP_012176380.1;Parent=gene-DOLE_RS15265;Dbxref=Genbank:WP_012176380.1;Name=WP_012176380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15265;product=hypothetical protein;protein_id=WP_012176380.1;transl_table=11 NC_009943.1 RefSeq gene 3561158 3561490 . - . ID=gene-DOLE_RS15270;Name=DOLE_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15270;old_locus_tag=Dole_2967 NC_009943.1 Protein Homology CDS 3561158 3561490 . - 0 ID=cds-WP_012176381.1;Parent=gene-DOLE_RS15270;Dbxref=Genbank:WP_012176381.1;Name=WP_012176381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004075058.1;locus_tag=DOLE_RS15270;product=ferredoxin:thioredoxin reductase;protein_id=WP_012176381.1;transl_table=11 NC_009943.1 RefSeq gene 3561487 3561744 . - . ID=gene-DOLE_RS15275;Name=DOLE_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15275;old_locus_tag=Dole_2968 NC_009943.1 Protein Homology CDS 3561487 3561744 . - 0 ID=cds-WP_012176382.1;Parent=gene-DOLE_RS15275;Dbxref=Genbank:WP_012176382.1;Name=WP_012176382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878512.1;locus_tag=DOLE_RS15275;product=glutaredoxin family protein;protein_id=WP_012176382.1;transl_table=11 NC_009943.1 RefSeq gene 3561845 3562474 . - . ID=gene-DOLE_RS15280;Name=DOLE_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15280;old_locus_tag=Dole_2969 NC_009943.1 Protein Homology CDS 3561845 3562474 . - 0 ID=cds-WP_012176383.1;Parent=gene-DOLE_RS15280;Dbxref=Genbank:WP_012176383.1;Name=WP_012176383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011189947.1;locus_tag=DOLE_RS15280;product=nitroreductase family protein;protein_id=WP_012176383.1;transl_table=11 NC_009943.1 RefSeq gene 3562749 3563072 . - . ID=gene-DOLE_RS15285;Name=DOLE_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15285;old_locus_tag=Dole_2970 NC_009943.1 Protein Homology CDS 3562749 3563072 . - 0 ID=cds-WP_012176384.1;Parent=gene-DOLE_RS15285;Dbxref=Genbank:WP_012176384.1;Name=WP_012176384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877169.1;locus_tag=DOLE_RS15285;product=hypothetical protein;protein_id=WP_012176384.1;transl_table=11 NC_009943.1 RefSeq gene 3563253 3563927 . - . ID=gene-DOLE_RS15290;Name=DOLE_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15290;old_locus_tag=Dole_2971 NC_009943.1 Protein Homology CDS 3563253 3563927 . - 0 ID=cds-WP_012176385.1;Parent=gene-DOLE_RS15290;Dbxref=Genbank:WP_012176385.1;Name=WP_012176385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587208.1;locus_tag=DOLE_RS15290;product=lysophospholipid acyltransferase family protein;protein_id=WP_012176385.1;transl_table=11 NC_009943.1 RefSeq gene 3564153 3565496 . + . ID=gene-DOLE_RS15295;Name=DOLE_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15295;old_locus_tag=Dole_2972 NC_009943.1 Protein Homology CDS 3564153 3565496 . + 0 ID=cds-WP_012176386.1;Parent=gene-DOLE_RS15295;Dbxref=Genbank:WP_012176386.1;Name=WP_012176386.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965403.1;locus_tag=DOLE_RS15295;product=M48 family metalloprotease;protein_id=WP_012176386.1;transl_table=11 NC_009943.1 RefSeq gene 3565658 3566755 . - . ID=gene-DOLE_RS15300;Name=DOLE_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15300;old_locus_tag=Dole_2973 NC_009943.1 Protein Homology CDS 3565658 3566755 . - 0 ID=cds-WP_012176387.1;Parent=gene-DOLE_RS15300;Dbxref=Genbank:WP_012176387.1;Name=WP_012176387.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF019344.2;locus_tag=DOLE_RS15300;product=AAA family ATPase;protein_id=WP_012176387.1;transl_table=11 NC_009943.1 RefSeq gene 3567111 3567740 . - . ID=gene-DOLE_RS15305;Name=DOLE_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15305;old_locus_tag=Dole_2974 NC_009943.1 Protein Homology CDS 3567111 3567740 . - 0 ID=cds-WP_012176388.1;Parent=gene-DOLE_RS15305;Dbxref=Genbank:WP_012176388.1;Name=WP_012176388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024701.2;locus_tag=DOLE_RS15305;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012176388.1;transl_table=11 NC_009943.1 RefSeq gene 3567740 3569311 . - . ID=gene-DOLE_RS15310;Name=DOLE_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15310;old_locus_tag=Dole_2975 NC_009943.1 Protein Homology CDS 3567740 3569311 . - 0 ID=cds-WP_012176389.1;Parent=gene-DOLE_RS15310;Dbxref=Genbank:WP_012176389.1;Name=WP_012176389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949243.1;locus_tag=DOLE_RS15310;product=FGGY-family carbohydrate kinase;protein_id=WP_012176389.1;transl_table=11 NC_009943.1 RefSeq gene 3569566 3570813 . - . ID=gene-DOLE_RS15315;Name=DOLE_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15315;old_locus_tag=Dole_2976 NC_009943.1 Protein Homology CDS 3569566 3570813 . - 0 ID=cds-WP_012176390.1;Parent=gene-DOLE_RS15315;Dbxref=Genbank:WP_012176390.1;Name=WP_012176390.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949242.1;locus_tag=DOLE_RS15315;product=saccharopine dehydrogenase NADP-binding domain-containing protein;protein_id=WP_012176390.1;transl_table=11 NC_009943.1 RefSeq gene 3571105 3572499 . + . ID=gene-DOLE_RS15320;Name=DOLE_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15320;old_locus_tag=Dole_2977 NC_009943.1 Protein Homology CDS 3571105 3572499 . + 0 ID=cds-WP_012176391.1;Parent=gene-DOLE_RS15320;Dbxref=Genbank:WP_012176391.1;Name=WP_012176391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967970.1;locus_tag=DOLE_RS15320;product=ATP-binding protein;protein_id=WP_012176391.1;transl_table=11 NC_009943.1 RefSeq gene 3572785 3573699 . - . ID=gene-DOLE_RS15325;Name=DOLE_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15325;old_locus_tag=Dole_2978 NC_009943.1 Protein Homology CDS 3572785 3573699 . - 0 ID=cds-WP_041281271.1;Parent=gene-DOLE_RS15325;Dbxref=Genbank:WP_041281271.1;Name=WP_041281271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949009.1;locus_tag=DOLE_RS15325;product=DUF1848 domain-containing protein;protein_id=WP_041281271.1;transl_table=11 NC_009943.1 cmsearch riboswitch 3573766 3573832 . + . ID=id-NC_009943.1:3573766..3573832;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NC_009943.1 RefSeq gene 3574303 3574704 . + . ID=gene-DOLE_RS15330;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=DOLE_RS15330;old_locus_tag=Dole_2979 NC_009943.1 Protein Homology CDS 3574303 3574704 . + 0 ID=cds-WP_012176393.1;Parent=gene-DOLE_RS15330;Dbxref=Genbank:WP_012176393.1;Name=WP_012176393.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967077.1;locus_tag=DOLE_RS15330;product=fluoride efflux transporter CrcB;protein_id=WP_012176393.1;transl_table=11 NC_009943.1 RefSeq gene 3574906 3576177 . + . ID=gene-DOLE_RS15335;Name=DOLE_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15335;old_locus_tag=Dole_2980 NC_009943.1 Protein Homology CDS 3574906 3576177 . + 0 ID=cds-WP_012176394.1;Parent=gene-DOLE_RS15335;Dbxref=Genbank:WP_012176394.1;Name=WP_012176394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878694.1;locus_tag=DOLE_RS15335;product=DUF190 domain-containing protein;protein_id=WP_012176394.1;transl_table=11 NC_009943.1 RefSeq gene 3576677 3577840 . + . ID=gene-DOLE_RS15340;Name=DOLE_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15340;old_locus_tag=Dole_2981 NC_009943.1 Protein Homology CDS 3576677 3577840 . + 0 ID=cds-WP_012176395.1;Parent=gene-DOLE_RS15340;Dbxref=Genbank:WP_012176395.1;Name=WP_012176395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.2;locus_tag=DOLE_RS15340;product=XRE family transcriptional regulator;protein_id=WP_012176395.1;transl_table=11 NC_009943.1 RefSeq gene 3577947 3580385 . + . ID=gene-DOLE_RS15345;Name=DOLE_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15345;old_locus_tag=Dole_2982 NC_009943.1 Protein Homology CDS 3577947 3580385 . + 0 ID=cds-WP_012176396.1;Parent=gene-DOLE_RS15345;Dbxref=Genbank:WP_012176396.1;Name=WP_012176396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012242.2;locus_tag=DOLE_RS15345;product=Hsp70 family protein;protein_id=WP_012176396.1;transl_table=11 NC_009943.1 RefSeq gene 3580729 3580926 . + . ID=gene-DOLE_RS15350;Name=DOLE_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15350 NC_009943.1 GeneMarkS-2+ CDS 3580729 3580926 . + 0 ID=cds-WP_041280629.1;Parent=gene-DOLE_RS15350;Dbxref=Genbank:WP_041280629.1;Name=WP_041280629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15350;product=hypothetical protein;protein_id=WP_041280629.1;transl_table=11 NC_009943.1 RefSeq gene 3581073 3583772 . + . ID=gene-DOLE_RS15355;Name=DOLE_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15355;old_locus_tag=Dole_2983 NC_009943.1 Protein Homology CDS 3581073 3583772 . + 0 ID=cds-WP_012176397.1;Parent=gene-DOLE_RS15355;Dbxref=Genbank:WP_012176397.1;Name=WP_012176397.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01587.1;locus_tag=DOLE_RS15355;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_012176397.1;transl_table=11 NC_009943.1 RefSeq gene 3583769 3585358 . + . ID=gene-DOLE_RS15360;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=DOLE_RS15360;old_locus_tag=Dole_2984 NC_009943.1 Protein Homology CDS 3583769 3585358 . + 0 ID=cds-WP_012176398.1;Parent=gene-DOLE_RS15360;Dbxref=Genbank:WP_012176398.1;Name=WP_012176398.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR02547.1;locus_tag=DOLE_RS15360;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_012176398.1;transl_table=11 NC_009943.1 RefSeq gene 3585355 3585933 . + . ID=gene-DOLE_RS15365;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=DOLE_RS15365;old_locus_tag=Dole_2985 NC_009943.1 Protein Homology CDS 3585355 3585933 . + 0 ID=cds-WP_012176399.1;Parent=gene-DOLE_RS15365;Dbxref=Genbank:WP_012176399.1;Name=WP_012176399.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casB;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR02548.1;locus_tag=DOLE_RS15365;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_012176399.1;transl_table=11 NC_009943.1 RefSeq gene 3585951 3587060 . + . ID=gene-DOLE_RS15370;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=DOLE_RS15370;old_locus_tag=Dole_2986 NC_009943.1 Protein Homology CDS 3585951 3587060 . + 0 ID=cds-WP_041280630.1;Parent=gene-DOLE_RS15370;Dbxref=Genbank:WP_041280630.1;Name=WP_041280630.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017866700.1;locus_tag=DOLE_RS15370;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_041280630.1;transl_table=11 NC_009943.1 RefSeq gene 3587070 3587849 . + . ID=gene-DOLE_RS15375;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=DOLE_RS15375;old_locus_tag=Dole_2987 NC_009943.1 Protein Homology CDS 3587070 3587849 . + 0 ID=cds-WP_012176401.1;Parent=gene-DOLE_RS15375;Dbxref=Genbank:WP_012176401.1;Name=WP_012176401.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF021240.2;locus_tag=DOLE_RS15375;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_012176401.1;transl_table=11 NC_009943.1 RefSeq gene 3587849 3588721 . + . ID=gene-DOLE_RS15380;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=DOLE_RS15380;old_locus_tag=Dole_2988 NC_009943.1 Protein Homology CDS 3587849 3588721 . + 0 ID=cds-WP_083766631.1;Parent=gene-DOLE_RS15380;Dbxref=Genbank:WP_083766631.1;Name=WP_083766631.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas6e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF020377.2;locus_tag=DOLE_RS15380;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_083766631.1;transl_table=11 NC_009943.1 RefSeq gene 3588767 3589696 . + . ID=gene-DOLE_RS15385;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=DOLE_RS15385;old_locus_tag=Dole_2989 NC_009943.1 Protein Homology CDS 3588767 3589696 . + 0 ID=cds-WP_012176403.1;Parent=gene-DOLE_RS15385;Dbxref=Genbank:WP_012176403.1;Name=WP_012176403.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: protein motif:HMM:TIGR03638.1;locus_tag=DOLE_RS15385;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_012176403.1;transl_table=11 NC_009943.1 RefSeq gene 3589698 3590015 . + . ID=gene-DOLE_RS15390;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=DOLE_RS15390;old_locus_tag=Dole_2990 NC_009943.1 Protein Homology CDS 3589698 3590015 . + 0 ID=cds-WP_012176404.1;Parent=gene-DOLE_RS15390;Dbxref=Genbank:WP_012176404.1;Name=WP_012176404.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417234.2;locus_tag=DOLE_RS15390;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_012176404.1;transl_table=11 NC_009943.1 RefSeq direct_repeat 3590108 3592576 . + . ID=id-NC_009943.1:3590108..3592576;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=3590108..3590136;rpt_unit_seq=atgttccccacacgtgtggggatgaaccg NC_009943.1 RefSeq gene 3592702 3592875 . - . ID=gene-DOLE_RS18330;Name=DOLE_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18330;old_locus_tag=Dole_2991 NC_009943.1 GeneMarkS-2+ CDS 3592702 3592875 . - 0 ID=cds-WP_012176405.1;Parent=gene-DOLE_RS18330;Dbxref=Genbank:WP_012176405.1;Name=WP_012176405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18330;product=hypothetical protein;protein_id=WP_012176405.1;transl_table=11 NC_009943.1 RefSeq gene 3593101 3593784 . + . ID=gene-DOLE_RS18335;Name=DOLE_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18335 NC_009943.1 GeneMarkS-2+ CDS 3593101 3593784 . + 0 ID=cds-WP_153304456.1;Parent=gene-DOLE_RS18335;Dbxref=Genbank:WP_153304456.1;Name=WP_153304456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18335;product=hypothetical protein;protein_id=WP_153304456.1;transl_table=11 NC_009943.1 RefSeq gene 3593880 3595043 . - . ID=gene-DOLE_RS15400;Name=DOLE_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15400;old_locus_tag=Dole_2992 NC_009943.1 Protein Homology CDS 3593880 3595043 . - 0 ID=cds-WP_012176406.1;Parent=gene-DOLE_RS15400;Dbxref=Genbank:WP_012176406.1;Name=WP_012176406.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=DOLE_RS15400;product=EAL domain-containing protein;protein_id=WP_012176406.1;transl_table=11 NC_009943.1 RefSeq gene 3595172 3595450 . - . ID=gene-DOLE_RS15405;Name=DOLE_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15405;old_locus_tag=Dole_2993 NC_009943.1 Protein Homology CDS 3595172 3595450 . - 0 ID=cds-WP_012176407.1;Parent=gene-DOLE_RS15405;Dbxref=Genbank:WP_012176407.1;Name=WP_012176407.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965292.1;locus_tag=DOLE_RS15405;product=putative addiction module antidote protein;protein_id=WP_012176407.1;transl_table=11 NC_009943.1 RefSeq gene 3595760 3596125 . - . ID=gene-DOLE_RS15410;Name=DOLE_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15410;old_locus_tag=Dole_2994 NC_009943.1 Protein Homology CDS 3595760 3596125 . - 0 ID=cds-WP_012176408.1;Parent=gene-DOLE_RS15410;Dbxref=Genbank:WP_012176408.1;Name=WP_012176408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663254.1;locus_tag=DOLE_RS15410;product=hypothetical protein;protein_id=WP_012176408.1;transl_table=11 NC_009943.1 RefSeq gene 3596115 3597095 . - . ID=gene-DOLE_RS15415;Name=DOLE_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15415;old_locus_tag=Dole_2995 NC_009943.1 Protein Homology CDS 3596115 3597095 . - 0 ID=cds-WP_012176409.1;Parent=gene-DOLE_RS15415;Dbxref=Genbank:WP_012176409.1;Name=WP_012176409.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011188022.1;locus_tag=DOLE_RS15415;product=patatin-like phospholipase family protein;protein_id=WP_012176409.1;transl_table=11 NC_009943.1 RefSeq gene 3597233 3597712 . + . ID=gene-DOLE_RS15420;Name=DOLE_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15420;old_locus_tag=Dole_2996 NC_009943.1 Protein Homology CDS 3597233 3597712 . + 0 ID=cds-WP_012176410.1;Parent=gene-DOLE_RS15420;Dbxref=Genbank:WP_012176410.1;Name=WP_012176410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949005.1;locus_tag=DOLE_RS15420;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_012176410.1;transl_table=11 NC_009943.1 RefSeq gene 3597823 3598110 . + . ID=gene-DOLE_RS15425;Name=DOLE_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15425;old_locus_tag=Dole_2997 NC_009943.1 Protein Homology CDS 3597823 3598110 . + 0 ID=cds-WP_012176411.1;Parent=gene-DOLE_RS15425;Dbxref=Genbank:WP_012176411.1;Name=WP_012176411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175075.1;locus_tag=DOLE_RS15425;product=GIY-YIG nuclease family protein;protein_id=WP_012176411.1;transl_table=11 NC_009943.1 RefSeq gene 3598304 3599791 . + . ID=gene-DOLE_RS15430;Name=DOLE_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15430;old_locus_tag=Dole_2998 NC_009943.1 Protein Homology CDS 3598304 3599791 . + 0 ID=cds-WP_012176412.1;Parent=gene-DOLE_RS15430;Dbxref=Genbank:WP_012176412.1;Name=WP_012176412.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025714.2;locus_tag=DOLE_RS15430;product=DUF4403 family protein;protein_id=WP_012176412.1;transl_table=11 NC_009943.1 RefSeq gene 3599788 3601143 . + . ID=gene-DOLE_RS15435;Name=DOLE_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15435;old_locus_tag=Dole_2999 NC_009943.1 Protein Homology CDS 3599788 3601143 . + 0 ID=cds-WP_012176413.1;Parent=gene-DOLE_RS15435;Dbxref=Genbank:WP_012176413.1;Name=WP_012176413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020587746.1;locus_tag=DOLE_RS15435;product=B12-binding domain-containing radical SAM protein;protein_id=WP_012176413.1;transl_table=11 NC_009943.1 RefSeq gene 3601629 3602036 . + . ID=gene-DOLE_RS15440;Name=DOLE_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15440;old_locus_tag=Dole_3000 NC_009943.1 Protein Homology CDS 3601629 3602036 . + 0 ID=cds-WP_012176414.1;Parent=gene-DOLE_RS15440;Dbxref=Genbank:WP_012176414.1;Name=WP_012176414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015404824.1;locus_tag=DOLE_RS15440;product=DUF2721 domain-containing protein;protein_id=WP_012176414.1;transl_table=11 NC_009943.1 RefSeq gene 3602026 3603354 . + . ID=gene-DOLE_RS15445;Name=DOLE_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15445;old_locus_tag=Dole_3001 NC_009943.1 Protein Homology CDS 3602026 3603354 . + 0 ID=cds-WP_153304457.1;Parent=gene-DOLE_RS15445;Dbxref=Genbank:WP_153304457.1;Name=WP_153304457.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=DOLE_RS15445;product=MFS transporter;protein_id=WP_153304457.1;transl_table=11 NC_009943.1 RefSeq gene 3603430 3604155 . + . ID=gene-DOLE_RS15450;Name=DOLE_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15450;old_locus_tag=Dole_3002 NC_009943.1 Protein Homology CDS 3603430 3604155 . + 0 ID=cds-WP_012176416.1;Parent=gene-DOLE_RS15450;Dbxref=Genbank:WP_012176416.1;Name=WP_012176416.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015961.2;locus_tag=DOLE_RS15450;product=lysophospholipid acyltransferase family protein;protein_id=WP_012176416.1;transl_table=11 NC_009943.1 RefSeq gene 3604200 3604706 . + . ID=gene-DOLE_RS15455;Name=DOLE_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15455;old_locus_tag=Dole_3003 NC_009943.1 Protein Homology CDS 3604200 3604706 . + 0 ID=cds-WP_012176417.1;Parent=gene-DOLE_RS15455;Dbxref=Genbank:WP_012176417.1;Name=WP_012176417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609617.1;locus_tag=DOLE_RS15455;product=nucleoside deaminase;protein_id=WP_012176417.1;transl_table=11 NC_009943.1 RefSeq gene 3604906 3605553 . - . ID=gene-DOLE_RS15460;Name=DOLE_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15460;old_locus_tag=Dole_3004 NC_009943.1 Protein Homology CDS 3604906 3605553 . - 0 ID=cds-WP_012176418.1;Parent=gene-DOLE_RS15460;Dbxref=Genbank:WP_012176418.1;Name=WP_012176418.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957264.1;locus_tag=DOLE_RS15460;product=cytochrome b/b6 domain-containing protein;protein_id=WP_012176418.1;transl_table=11 NC_009943.1 RefSeq pseudogene 3605556 3607124 . - . ID=gene-DOLE_RS15465;Name=DOLE_RS15465;end_range=3607124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DOLE_RS15465;old_locus_tag=Dole_3005;partial=true;pseudo=true NC_009943.1 Protein Homology CDS 3605556 3607124 . - 0 ID=cds-DOLE_RS15465;Parent=gene-DOLE_RS15465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0022904,GO:0020037;end_range=3607124,.;gbkey=CDS;go_function=heme binding|0020037||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073351.1;locus_tag=DOLE_RS15465;partial=true;product=tetrathionate reductase family octaheme c-type cytochrome;pseudo=true;transl_table=11 NC_009943.1 RefSeq gene 3607505 3609328 . - . ID=gene-DOLE_RS15470;Name=DOLE_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15470;old_locus_tag=Dole_3006 NC_009943.1 Protein Homology CDS 3607505 3609328 . - 0 ID=cds-WP_012176420.1;Parent=gene-DOLE_RS15470;Dbxref=Genbank:WP_012176420.1;Name=WP_012176420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=DOLE_RS15470;product=AMP-binding protein;protein_id=WP_012176420.1;transl_table=11 NC_009943.1 RefSeq gene 3609328 3610104 . - . ID=gene-DOLE_RS15475;Name=DOLE_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15475;old_locus_tag=Dole_3007 NC_009943.1 Protein Homology CDS 3609328 3610104 . - 0 ID=cds-WP_012176421.1;Parent=gene-DOLE_RS15475;Dbxref=Genbank:WP_012176421.1;Name=WP_012176421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609217.1;locus_tag=DOLE_RS15475;product=ABC transporter ATP-binding protein;protein_id=WP_012176421.1;transl_table=11 NC_009943.1 RefSeq gene 3610111 3610938 . - . ID=gene-DOLE_RS15480;Name=DOLE_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15480;old_locus_tag=Dole_3008 NC_009943.1 Protein Homology CDS 3610111 3610938 . - 0 ID=cds-WP_012176422.1;Parent=gene-DOLE_RS15480;Dbxref=Genbank:WP_012176422.1;Name=WP_012176422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948246.1;locus_tag=DOLE_RS15480;product=ABC transporter ATP-binding protein;protein_id=WP_012176422.1;transl_table=11 NC_009943.1 RefSeq gene 3611015 3612262 . - . ID=gene-DOLE_RS15485;Name=DOLE_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15485;old_locus_tag=Dole_3009 NC_009943.1 Protein Homology CDS 3611015 3612262 . - 0 ID=cds-WP_012176423.1;Parent=gene-DOLE_RS15485;Dbxref=Genbank:WP_012176423.1;Name=WP_012176423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948247.1;locus_tag=DOLE_RS15485;product=ABC transporter substrate-binding protein;protein_id=WP_012176423.1;transl_table=11 NC_009943.1 RefSeq gene 3612316 3613191 . - . ID=gene-DOLE_RS15490;Name=DOLE_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15490;old_locus_tag=Dole_3010 NC_009943.1 Protein Homology CDS 3612316 3613191 . - 0 ID=cds-WP_012176424.1;Parent=gene-DOLE_RS15490;Dbxref=Genbank:WP_012176424.1;Name=WP_012176424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948248.1;locus_tag=DOLE_RS15490;product=branched-chain amino acid ABC transporter permease;protein_id=WP_012176424.1;transl_table=11 NC_009943.1 RefSeq gene 3613219 3614280 . - . ID=gene-DOLE_RS15495;Name=DOLE_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15495;old_locus_tag=Dole_3011 NC_009943.1 Protein Homology CDS 3613219 3614280 . - 0 ID=cds-WP_052294316.1;Parent=gene-DOLE_RS15495;Dbxref=Genbank:WP_052294316.1;Name=WP_052294316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948249.1;locus_tag=DOLE_RS15495;product=branched-chain amino acid ABC transporter permease;protein_id=WP_052294316.1;transl_table=11 NC_009943.1 RefSeq gene 3614449 3615513 . - . ID=gene-DOLE_RS15500;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=DOLE_RS15500;old_locus_tag=Dole_3012 NC_009943.1 Protein Homology CDS 3614449 3615513 . - 0 ID=cds-WP_012176426.1;Parent=gene-DOLE_RS15500;Dbxref=Genbank:WP_012176426.1;Name=WP_012176426.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: protein motif:HMM:TIGR00383.1;locus_tag=DOLE_RS15500;product=magnesium/cobalt transporter CorA;protein_id=WP_012176426.1;transl_table=11 NC_009943.1 RefSeq gene 3615549 3618080 . - . ID=gene-DOLE_RS18640;Name=DOLE_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18640;old_locus_tag=Dole_3013 NC_009943.1 Protein Homology CDS 3615549 3618080 . - 0 ID=cds-WP_012176427.1;Parent=gene-DOLE_RS18640;Dbxref=Genbank:WP_012176427.1;Name=WP_012176427.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=DOLE_RS18640;product=mechanosensitive ion channel;protein_id=WP_012176427.1;transl_table=11 NC_009943.1 RefSeq gene 3618117 3618644 . - . ID=gene-DOLE_RS15510;Name=DOLE_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15510;old_locus_tag=Dole_3014 NC_009943.1 Protein Homology CDS 3618117 3618644 . - 0 ID=cds-WP_012176428.1;Parent=gene-DOLE_RS15510;Dbxref=Genbank:WP_012176428.1;Name=WP_012176428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163478.1;locus_tag=DOLE_RS15510;product=YeeE/YedE thiosulfate transporter family protein;protein_id=WP_012176428.1;transl_table=11 NC_009943.1 RefSeq gene 3618641 3619171 . - . ID=gene-DOLE_RS15515;Name=DOLE_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15515;old_locus_tag=Dole_3015 NC_009943.1 Protein Homology CDS 3618641 3619171 . - 0 ID=cds-WP_153304459.1;Parent=gene-DOLE_RS15515;Dbxref=Genbank:WP_153304459.1;Name=WP_153304459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723732.1;locus_tag=DOLE_RS15515;product=YeeE/YedE thiosulfate transporter family protein;protein_id=WP_153304459.1;transl_except=(pos:complement(3618770..3618772)%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 3619337 3620617 . - . ID=gene-DOLE_RS17655;Name=DOLE_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17655;old_locus_tag=Dole_3016 NC_009943.1 Protein Homology CDS 3619337 3620617 . - 0 ID=cds-WP_012176430.1;Parent=gene-DOLE_RS17655;Dbxref=Genbank:WP_012176430.1;Name=WP_012176430.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=DOLE_RS17655;product=mechanosensitive ion channel family protein;protein_id=WP_012176430.1;transl_table=11 NC_009943.1 RefSeq gene 3620794 3621579 . - . ID=gene-DOLE_RS15525;Name=DOLE_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15525;old_locus_tag=Dole_3017 NC_009943.1 Protein Homology CDS 3620794 3621579 . - 0 ID=cds-WP_012176431.1;Parent=gene-DOLE_RS15525;Dbxref=Genbank:WP_012176431.1;Name=WP_012176431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021252.2;locus_tag=DOLE_RS15525;product=C-GCAxxG-C-C family protein;protein_id=WP_012176431.1;transl_table=11 NC_009943.1 RefSeq gene 3621717 3622898 . - . ID=gene-DOLE_RS15530;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=DOLE_RS15530;old_locus_tag=Dole_3018 NC_009943.1 Protein Homology CDS 3621717 3622898 . - 0 ID=cds-WP_012176432.1;Parent=gene-DOLE_RS15530;Dbxref=Genbank:WP_012176432.1;Name=WP_012176432.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: protein motif:HMM:TIGR00539.1;locus_tag=DOLE_RS15530;product=radical SAM family heme chaperone HemW;protein_id=WP_012176432.1;transl_table=11 NC_009943.1 RefSeq gene 3622879 3623424 . - . ID=gene-DOLE_RS15535;Name=DOLE_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15535;old_locus_tag=Dole_3019 NC_009943.1 Protein Homology CDS 3622879 3623424 . - 0 ID=cds-WP_012176433.1;Parent=gene-DOLE_RS15535;Dbxref=Genbank:WP_012176433.1;Name=WP_012176433.1;Ontology_term=GO:0016903;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905559.1;locus_tag=DOLE_RS15535;product=2-oxoacid:acceptor oxidoreductase family protein;protein_id=WP_012176433.1;transl_table=11 NC_009943.1 RefSeq gene 3623421 3624230 . - . ID=gene-DOLE_RS15540;Name=DOLE_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15540;old_locus_tag=Dole_3020 NC_009943.1 Protein Homology CDS 3623421 3624230 . - 0 ID=cds-WP_012176434.1;Parent=gene-DOLE_RS15540;Dbxref=Genbank:WP_012176434.1;Name=WP_012176434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947474.1;locus_tag=DOLE_RS15540;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_012176434.1;transl_table=11 NC_009943.1 RefSeq gene 3624234 3625382 . - . ID=gene-DOLE_RS15545;Name=DOLE_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15545;old_locus_tag=Dole_3021 NC_009943.1 Protein Homology CDS 3624234 3625382 . - 0 ID=cds-WP_012176435.1;Parent=gene-DOLE_RS15545;Dbxref=Genbank:WP_012176435.1;Name=WP_012176435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875643.1;locus_tag=DOLE_RS15545;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_012176435.1;transl_table=11 NC_009943.1 RefSeq gene 3625375 3625596 . - . ID=gene-DOLE_RS15550;Name=DOLE_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15550;old_locus_tag=Dole_3022 NC_009943.1 Protein Homology CDS 3625375 3625596 . - 0 ID=cds-WP_012176436.1;Parent=gene-DOLE_RS15550;Dbxref=Genbank:WP_012176436.1;Name=WP_012176436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875644.1;locus_tag=DOLE_RS15550;product=4Fe-4S binding protein;protein_id=WP_012176436.1;transl_table=11 NC_009943.1 RefSeq gene 3625597 3626757 . - . ID=gene-DOLE_RS15555;Name=DOLE_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15555;old_locus_tag=Dole_3023 NC_009943.1 Protein Homology CDS 3625597 3626757 . - 0 ID=cds-WP_012176437.1;Parent=gene-DOLE_RS15555;Dbxref=Genbank:WP_012176437.1;Name=WP_012176437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875645.1;locus_tag=DOLE_RS15555;product=radical SAM protein;protein_id=WP_012176437.1;transl_table=11 NC_009943.1 RefSeq gene 3627018 3630710 . + . ID=gene-DOLE_RS15560;Name=DOLE_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15560;old_locus_tag=Dole_3024 NC_009943.1 Protein Homology CDS 3627018 3630710 . + 0 ID=cds-WP_012176438.1;Parent=gene-DOLE_RS15560;Dbxref=Genbank:WP_012176438.1;Name=WP_012176438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028479.2;locus_tag=DOLE_RS15560;product=tetratricopeptide repeat protein;protein_id=WP_012176438.1;transl_table=11 NC_009943.1 RefSeq gene 3630727 3631200 . + . ID=gene-DOLE_RS15565;Name=DOLE_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15565;old_locus_tag=Dole_3025 NC_009943.1 GeneMarkS-2+ CDS 3630727 3631200 . + 0 ID=cds-WP_012176439.1;Parent=gene-DOLE_RS15565;Dbxref=Genbank:WP_012176439.1;Name=WP_012176439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15565;product=tetratricopeptide repeat protein;protein_id=WP_012176439.1;transl_table=11 NC_009943.1 RefSeq gene 3631248 3633173 . - . ID=gene-DOLE_RS15570;Name=DOLE_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15570;old_locus_tag=Dole_3026 NC_009943.1 GeneMarkS-2+ CDS 3631248 3633173 . - 0 ID=cds-WP_012176440.1;Parent=gene-DOLE_RS15570;Dbxref=Genbank:WP_012176440.1;Name=WP_012176440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15570;product=hypothetical protein;protein_id=WP_012176440.1;transl_table=11 NC_009943.1 RefSeq gene 3633315 3634121 . - . ID=gene-DOLE_RS15575;Name=DOLE_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15575;old_locus_tag=Dole_3027 NC_009943.1 Protein Homology CDS 3633315 3634121 . - 0 ID=cds-WP_012176441.1;Parent=gene-DOLE_RS15575;Dbxref=Genbank:WP_012176441.1;Name=WP_012176441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876241.1;locus_tag=DOLE_RS15575;product=MBL fold metallo-hydrolase;protein_id=WP_012176441.1;transl_table=11 NC_009943.1 RefSeq gene 3634178 3634651 . - . ID=gene-DOLE_RS15580;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=DOLE_RS15580;old_locus_tag=Dole_3028 NC_009943.1 Protein Homology CDS 3634178 3634651 . - 0 ID=cds-WP_012176442.1;Parent=gene-DOLE_RS15580;Dbxref=Genbank:WP_012176442.1;Name=WP_012176442.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949462.1;locus_tag=DOLE_RS15580;product=dUTP diphosphatase;protein_id=WP_012176442.1;transl_table=11 NC_009943.1 RefSeq gene 3634667 3636832 . - . ID=gene-DOLE_RS15585;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=DOLE_RS15585;old_locus_tag=Dole_3029 NC_009943.1 Protein Homology CDS 3634667 3636832 . - 0 ID=cds-WP_012176443.1;Parent=gene-DOLE_RS15585;Dbxref=Genbank:WP_012176443.1;Name=WP_012176443.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176443.1;locus_tag=DOLE_RS15585;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_012176443.1;transl_table=11 NC_009943.1 RefSeq gene 3636947 3637216 . - . ID=gene-DOLE_RS15590;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=DOLE_RS15590;old_locus_tag=Dole_3030 NC_009943.1 Protein Homology CDS 3636947 3637216 . - 0 ID=cds-WP_012176444.1;Parent=gene-DOLE_RS15590;Dbxref=Genbank:WP_012176444.1;Name=WP_012176444.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=DOLE_RS15590;product=30S ribosomal protein S15;protein_id=WP_012176444.1;transl_table=11 NC_009943.1 RefSeq gene 3637331 3638242 . - . ID=gene-DOLE_RS15595;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=DOLE_RS15595;old_locus_tag=Dole_3031 NC_009943.1 Protein Homology CDS 3637331 3638242 . - 0 ID=cds-WP_012176445.1;Parent=gene-DOLE_RS15595;Dbxref=Genbank:WP_012176445.1;Name=WP_012176445.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR00431.1;locus_tag=DOLE_RS15595;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_012176445.1;transl_table=11 NC_009943.1 RefSeq gene 3638239 3639216 . - . ID=gene-DOLE_RS15600;Name=DOLE_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15600;old_locus_tag=Dole_3032 NC_009943.1 Protein Homology CDS 3638239 3639216 . - 0 ID=cds-WP_012176446.1;Parent=gene-DOLE_RS15600;Dbxref=Genbank:WP_012176446.1;Name=WP_012176446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013528.2;locus_tag=DOLE_RS15600;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_012176446.1;transl_table=11 NC_009943.1 RefSeq gene 3639179 3639568 . - . ID=gene-DOLE_RS15605;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=DOLE_RS15605;old_locus_tag=Dole_3033 NC_009943.1 Protein Homology CDS 3639179 3639568 . - 0 ID=cds-WP_012176447.1;Parent=gene-DOLE_RS15605;Dbxref=Genbank:WP_012176447.1;Name=WP_012176447.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176447.1;locus_tag=DOLE_RS15605;product=30S ribosome-binding factor RbfA;protein_id=WP_012176447.1;transl_table=11 NC_009943.1 RefSeq gene 3639565 3639867 . - . ID=gene-DOLE_RS15610;Name=DOLE_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15610;old_locus_tag=Dole_3034 NC_009943.1 Protein Homology CDS 3639565 3639867 . - 0 ID=cds-WP_232362716.1;Parent=gene-DOLE_RS15610;Dbxref=Genbank:WP_232362716.1;Name=WP_232362716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073036.1;locus_tag=DOLE_RS15610;product=DUF503 domain-containing protein;protein_id=WP_232362716.1;transl_table=11 NC_009943.1 RefSeq gene 3639892 3642546 . - . ID=gene-DOLE_RS15615;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=DOLE_RS15615;old_locus_tag=Dole_3035 NC_009943.1 Protein Homology CDS 3639892 3642546 . - 0 ID=cds-WP_012176449.1;Parent=gene-DOLE_RS15615;Dbxref=Genbank:WP_012176449.1;Name=WP_012176449.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176449.1;locus_tag=DOLE_RS15615;product=translation initiation factor IF-2;protein_id=WP_012176449.1;transl_table=11 NC_009943.1 RefSeq gene 3642574 3644001 . - . ID=gene-DOLE_RS15620;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=DOLE_RS15620;old_locus_tag=Dole_3036 NC_009943.1 Protein Homology CDS 3642574 3644001 . - 0 ID=cds-WP_012176450.1;Parent=gene-DOLE_RS15620;Dbxref=Genbank:WP_012176450.1;Name=WP_012176450.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877488.1;locus_tag=DOLE_RS15620;product=transcription termination factor NusA;protein_id=WP_012176450.1;transl_table=11 NC_009943.1 RefSeq gene 3643998 3644543 . - . ID=gene-DOLE_RS15625;Name=DOLE_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15625;old_locus_tag=Dole_3037 NC_009943.1 Protein Homology CDS 3643998 3644543 . - 0 ID=cds-WP_012176451.1;Parent=gene-DOLE_RS15625;Dbxref=Genbank:WP_012176451.1;Name=WP_012176451.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014617.2;locus_tag=DOLE_RS15625;product=ribosome maturation factor RimP;protein_id=WP_012176451.1;transl_table=11 NC_009943.1 RefSeq gene 3644691 3644766 . - . ID=gene-DOLE_RS15630;Name=DOLE_RS15630;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS15630;old_locus_tag=Dole_R0048 NC_009943.1 tRNAscan-SE tRNA 3644691 3644766 . - . ID=rna-DOLE_RS15630;Parent=gene-DOLE_RS15630;anticodon=(pos:complement(3644731..3644733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS15630;product=tRNA-Gly NC_009943.1 tRNAscan-SE exon 3644691 3644766 . - . ID=exon-DOLE_RS15630-1;Parent=rna-DOLE_RS15630;anticodon=(pos:complement(3644731..3644733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS15630;product=tRNA-Gly NC_009943.1 RefSeq gene 3644827 3645204 . - . ID=gene-DOLE_RS15635;Name=DOLE_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15635;old_locus_tag=Dole_3038 NC_009943.1 Protein Homology CDS 3644827 3645204 . - 0 ID=cds-WP_012176452.1;Parent=gene-DOLE_RS15635;Dbxref=Genbank:WP_012176452.1;Name=WP_012176452.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=DOLE_RS15635;product=MerR family transcriptional regulator;protein_id=WP_012176452.1;transl_table=11 NC_009943.1 RefSeq gene 3645244 3647655 . - . ID=gene-DOLE_RS15640;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=DOLE_RS15640;old_locus_tag=Dole_3039 NC_009943.1 Protein Homology CDS 3645244 3647655 . - 0 ID=cds-WP_012176453.1;Parent=gene-DOLE_RS15640;Dbxref=Genbank:WP_012176453.1;Name=WP_012176453.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662826.1;locus_tag=DOLE_RS15640;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_012176453.1;transl_table=11 NC_009943.1 RefSeq gene 3647656 3648660 . - . ID=gene-DOLE_RS15645;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=DOLE_RS15645;old_locus_tag=Dole_3040 NC_009943.1 Protein Homology CDS 3647656 3648660 . - 0 ID=cds-WP_012176454.1;Parent=gene-DOLE_RS15645;Dbxref=Genbank:WP_012176454.1;Name=WP_012176454.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176454.1;locus_tag=DOLE_RS15645;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_012176454.1;transl_table=11 NC_009943.1 RefSeq gene 3648793 3649143 . - . ID=gene-DOLE_RS15650;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=DOLE_RS15650;old_locus_tag=Dole_3041 NC_009943.1 Protein Homology CDS 3648793 3649143 . - 0 ID=cds-WP_012176455.1;Parent=gene-DOLE_RS15650;Dbxref=Genbank:WP_012176455.1;Name=WP_012176455.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176455.1;locus_tag=DOLE_RS15650;product=50S ribosomal protein L20;protein_id=WP_012176455.1;transl_table=11 NC_009943.1 RefSeq gene 3649195 3649392 . - . ID=gene-DOLE_RS15655;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=DOLE_RS15655;old_locus_tag=Dole_3042 NC_009943.1 Protein Homology CDS 3649195 3649392 . - 0 ID=cds-WP_012176456.1;Parent=gene-DOLE_RS15655;Dbxref=Genbank:WP_012176456.1;Name=WP_012176456.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005950095.1;locus_tag=DOLE_RS15655;product=50S ribosomal protein L35;protein_id=WP_012176456.1;transl_table=11 NC_009943.1 RefSeq gene 3649469 3649990 . - . ID=gene-DOLE_RS15660;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=DOLE_RS15660;old_locus_tag=Dole_3043 NC_009943.1 Protein Homology CDS 3649469 3649990 . - 0 ID=cds-WP_041280633.1;Parent=gene-DOLE_RS15660;Dbxref=Genbank:WP_041280633.1;Name=WP_041280633.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610929.1;locus_tag=DOLE_RS15660;product=translation initiation factor IF-3;protein_id=WP_041280633.1;transl_table=11 NC_009943.1 RefSeq gene 3650376 3652298 . + . ID=gene-DOLE_RS15665;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=DOLE_RS15665;old_locus_tag=Dole_3044 NC_009943.1 Protein Homology CDS 3650376 3652298 . + 0 ID=cds-WP_041280634.1;Parent=gene-DOLE_RS15665;Dbxref=Genbank:WP_041280634.1;Name=WP_041280634.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948999.1;locus_tag=DOLE_RS15665;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_041280634.1;transl_table=11 NC_009943.1 RefSeq gene 3652304 3653179 . + . ID=gene-DOLE_RS15670;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=DOLE_RS15670;old_locus_tag=Dole_3045 NC_009943.1 Protein Homology CDS 3652304 3653179 . + 0 ID=cds-WP_012176459.1;Parent=gene-DOLE_RS15670;Dbxref=Genbank:WP_012176459.1;Name=WP_012176459.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968457.1;locus_tag=DOLE_RS15670;product=dihydropteroate synthase;protein_id=WP_012176459.1;transl_table=11 NC_009943.1 RefSeq gene 3653191 3653958 . + . ID=gene-DOLE_RS15675;Name=DOLE_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15675;old_locus_tag=Dole_3046 NC_009943.1 Protein Homology CDS 3653191 3653958 . + 0 ID=cds-WP_012176460.1;Parent=gene-DOLE_RS15675;Dbxref=Genbank:WP_012176460.1;Name=WP_012176460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176460.1;locus_tag=DOLE_RS15675;product=type III pantothenate kinase;protein_id=WP_012176460.1;transl_table=11 NC_009943.1 RefSeq gene 3654236 3655303 . - . ID=gene-DOLE_RS15680;Name=DOLE_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15680;old_locus_tag=Dole_3047 NC_009943.1 Protein Homology CDS 3654236 3655303 . - 0 ID=cds-WP_041280635.1;Parent=gene-DOLE_RS15680;Dbxref=Genbank:WP_041280635.1;Name=WP_041280635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025056.2;locus_tag=DOLE_RS15680;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_041280635.1;transl_table=11 NC_009943.1 RefSeq gene 3655670 3656026 . - . ID=gene-DOLE_RS15690;Name=DOLE_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15690 NC_009943.1 GeneMarkS-2+ CDS 3655670 3656026 . - 0 ID=cds-WP_041280637.1;Parent=gene-DOLE_RS15690;Dbxref=Genbank:WP_041280637.1;Name=WP_041280637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15690;product=hypothetical protein;protein_id=WP_041280637.1;transl_table=11 NC_009943.1 RefSeq gene 3657325 3657837 . + . ID=gene-DOLE_RS15705;Name=DOLE_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15705;old_locus_tag=Dole_3049 NC_009943.1 Protein Homology CDS 3657325 3657837 . + 0 ID=cds-WP_012176463.1;Parent=gene-DOLE_RS15705;Dbxref=Genbank:WP_012176463.1;Name=WP_012176463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905115.1;locus_tag=DOLE_RS15705;product=nitroreductase family protein;protein_id=WP_012176463.1;transl_table=11 NC_009943.1 RefSeq gene 3658097 3658261 . - . ID=gene-DOLE_RS18340;Name=DOLE_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18340;old_locus_tag=Dole_3050 NC_009943.1 GeneMarkS-2+ CDS 3658097 3658261 . - 0 ID=cds-WP_012176464.1;Parent=gene-DOLE_RS18340;Dbxref=Genbank:WP_012176464.1;Name=WP_012176464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18340;product=hypothetical protein;protein_id=WP_012176464.1;transl_table=11 NC_009943.1 RefSeq gene 3658258 3658932 . - . ID=gene-DOLE_RS15710;Name=DOLE_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15710;old_locus_tag=Dole_3051 NC_009943.1 Protein Homology CDS 3658258 3658932 . - 0 ID=cds-WP_012176465.1;Parent=gene-DOLE_RS15710;Dbxref=Genbank:WP_012176465.1;Name=WP_012176465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025094.2;locus_tag=DOLE_RS15710;product=zinc-ribbon domain-containing protein;protein_id=WP_012176465.1;transl_table=11 NC_009943.1 RefSeq gene 3658944 3660107 . - . ID=gene-DOLE_RS15715;Name=DOLE_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15715;old_locus_tag=Dole_3052 NC_009943.1 Protein Homology CDS 3658944 3660107 . - 0 ID=cds-WP_012176466.1;Parent=gene-DOLE_RS15715;Dbxref=Genbank:WP_012176466.1;Name=WP_012176466.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948049.1;locus_tag=DOLE_RS15715;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_012176466.1;transl_table=11 NC_009943.1 RefSeq gene 3660128 3661210 . - . ID=gene-DOLE_RS15720;Name=DOLE_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15720;old_locus_tag=Dole_3053 NC_009943.1 Protein Homology CDS 3660128 3661210 . - 0 ID=cds-WP_012176467.1;Parent=gene-DOLE_RS15720;Dbxref=Genbank:WP_012176467.1;Name=WP_012176467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956093.1;locus_tag=DOLE_RS15720;product=type IV pilus twitching motility protein PilT;protein_id=WP_012176467.1;transl_table=11 NC_009943.1 RefSeq gene 3661284 3661583 . - . ID=gene-DOLE_RS15725;Name=DOLE_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15725;old_locus_tag=Dole_3054 NC_009943.1 Protein Homology CDS 3661284 3661583 . - 0 ID=cds-WP_012176468.1;Parent=gene-DOLE_RS15725;Dbxref=Genbank:WP_012176468.1;Name=WP_012176468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015403869.1;locus_tag=DOLE_RS15725;product=YggT family protein;protein_id=WP_012176468.1;transl_table=11 NC_009943.1 RefSeq gene 3661738 3662076 . - . ID=gene-DOLE_RS15730;Name=DOLE_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15730;old_locus_tag=Dole_3055 NC_009943.1 Protein Homology CDS 3661738 3662076 . - 0 ID=cds-WP_012176469.1;Parent=gene-DOLE_RS15730;Dbxref=Genbank:WP_012176469.1;Name=WP_012176469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724580.1;locus_tag=DOLE_RS15730;product=rubrerythrin;protein_id=WP_012176469.1;transl_table=11 NC_009943.1 RefSeq gene 3662194 3662436 . - . ID=gene-DOLE_RS15735;Name=DOLE_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15735;old_locus_tag=Dole_3056 NC_009943.1 GeneMarkS-2+ CDS 3662194 3662436 . - 0 ID=cds-WP_041281289.1;Parent=gene-DOLE_RS15735;Dbxref=Genbank:WP_041281289.1;Name=WP_041281289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15735;product=hypothetical protein;protein_id=WP_041281289.1;transl_table=11 NC_009943.1 RefSeq gene 3662545 3662829 . - . ID=gene-DOLE_RS15740;Name=DOLE_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15740;old_locus_tag=Dole_3057 NC_009943.1 GeneMarkS-2+ CDS 3662545 3662829 . - 0 ID=cds-WP_041280640.1;Parent=gene-DOLE_RS15740;Dbxref=Genbank:WP_041280640.1;Name=WP_041280640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15740;product=hypothetical protein;protein_id=WP_041280640.1;transl_table=11 NC_009943.1 RefSeq gene 3663070 3664659 . - . ID=gene-DOLE_RS15745;Name=DOLE_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15745;old_locus_tag=Dole_3058 NC_009943.1 Protein Homology CDS 3663070 3664659 . - 0 ID=cds-WP_012176472.1;Parent=gene-DOLE_RS15745;Dbxref=Genbank:WP_012176472.1;Name=WP_012176472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.2;locus_tag=DOLE_RS15745;product=radical SAM protein;protein_id=WP_012176472.1;transl_table=11 NC_009943.1 RefSeq gene 3664891 3666654 . - . ID=gene-DOLE_RS15750;Name=DOLE_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15750;old_locus_tag=Dole_3059 NC_009943.1 Protein Homology CDS 3664891 3666654 . - 0 ID=cds-WP_012176473.1;Parent=gene-DOLE_RS15750;Dbxref=Genbank:WP_012176473.1;Name=WP_012176473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176473.1;locus_tag=DOLE_RS15750;product=formate--tetrahydrofolate ligase;protein_id=WP_012176473.1;transl_table=11 NC_009943.1 RefSeq gene 3667198 3668673 . + . ID=gene-DOLE_RS15755;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=DOLE_RS15755;old_locus_tag=Dole_3060 NC_009943.1 Protein Homology CDS 3667198 3668673 . + 0 ID=cds-WP_012176474.1;Parent=gene-DOLE_RS15755;Dbxref=Genbank:WP_012176474.1;Name=WP_012176474.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963705.1;locus_tag=DOLE_RS15755;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_012176474.1;transl_table=11 NC_009943.1 RefSeq gene 3669012 3669242 . + . ID=gene-DOLE_RS15760;Name=DOLE_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15760;old_locus_tag=Dole_3061 NC_009943.1 Protein Homology CDS 3669012 3669242 . + 0 ID=cds-WP_012176475.1;Parent=gene-DOLE_RS15760;Dbxref=Genbank:WP_012176475.1;Name=WP_012176475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004073860.1;locus_tag=DOLE_RS15760;product=zinc ribbon domain-containing protein;protein_id=WP_012176475.1;transl_table=11 NC_009943.1 RefSeq gene 3669415 3670941 . + . ID=gene-DOLE_RS15765;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=DOLE_RS15765;old_locus_tag=Dole_3062 NC_009943.1 Protein Homology CDS 3669415 3670941 . + 0 ID=cds-WP_153304462.1;Parent=gene-DOLE_RS15765;Dbxref=Genbank:WP_153304462.1;Name=WP_153304462.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020877299.1;locus_tag=DOLE_RS15765;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_153304462.1;transl_table=11 NC_009943.1 RefSeq gene 3670964 3673099 . + . ID=gene-DOLE_RS15770;Name=DOLE_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15770;old_locus_tag=Dole_3063 NC_009943.1 Protein Homology CDS 3670964 3673099 . + 0 ID=cds-WP_012176477.1;Parent=gene-DOLE_RS15770;Dbxref=Genbank:WP_012176477.1;Name=WP_012176477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012663040.1;locus_tag=DOLE_RS15770;product=acetate--CoA ligase;protein_id=WP_012176477.1;transl_table=11 NC_009943.1 RefSeq gene 3673096 3673704 . + . ID=gene-DOLE_RS15775;Name=DOLE_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15775;old_locus_tag=Dole_3064 NC_009943.1 Protein Homology CDS 3673096 3673704 . + 0 ID=cds-WP_012176478.1;Parent=gene-DOLE_RS15775;Dbxref=Genbank:WP_012176478.1;Name=WP_012176478.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: protein motif:HMM:NF013786.2;locus_tag=DOLE_RS15775;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_012176478.1;transl_table=11 NC_009943.1 RefSeq gene 3674182 3674382 . + . ID=gene-DOLE_RS15780;Name=DOLE_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15780;old_locus_tag=Dole_3065 NC_009943.1 Protein Homology CDS 3674182 3674382 . + 0 ID=cds-WP_012176479.1;Parent=gene-DOLE_RS15780;Dbxref=Genbank:WP_012176479.1;Name=WP_012176479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875146.1;locus_tag=DOLE_RS15780;product=cold-shock protein;protein_id=WP_012176479.1;transl_table=11 NC_009943.1 RefSeq gene 3674489 3675877 . + . ID=gene-DOLE_RS15785;Name=DOLE_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15785;old_locus_tag=Dole_3066 NC_009943.1 Protein Homology CDS 3674489 3675877 . + 0 ID=cds-WP_012176480.1;Parent=gene-DOLE_RS15785;Dbxref=Genbank:WP_012176480.1;Name=WP_012176480.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015725847.1;locus_tag=DOLE_RS15785;product=TIGR01777 family oxidoreductase;protein_id=WP_012176480.1;transl_table=11 NC_009943.1 RefSeq gene 3675879 3676985 . + . ID=gene-DOLE_RS15790;Name=DOLE_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15790;old_locus_tag=Dole_3067 NC_009943.1 Protein Homology CDS 3675879 3676985 . + 0 ID=cds-WP_012176481.1;Parent=gene-DOLE_RS15790;Dbxref=Genbank:WP_012176481.1;Name=WP_012176481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957248.1;locus_tag=DOLE_RS15790;product=hypothetical protein;protein_id=WP_012176481.1;transl_table=11 NC_009943.1 RefSeq gene 3677314 3678726 . - . ID=gene-DOLE_RS15795;Name=DOLE_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15795;old_locus_tag=Dole_3068 NC_009943.1 Protein Homology CDS 3677314 3678726 . - 0 ID=cds-WP_012176482.1;Parent=gene-DOLE_RS15795;Dbxref=Genbank:WP_012176482.1;Name=WP_012176482.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875692.1;locus_tag=DOLE_RS15795;product=sigma 54-interacting transcriptional regulator;protein_id=WP_012176482.1;transl_table=11 NC_009943.1 RefSeq gene 3679142 3679456 . + . ID=gene-DOLE_RS15800;Name=DOLE_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15800;old_locus_tag=Dole_3069 NC_009943.1 Protein Homology CDS 3679142 3679456 . + 0 ID=cds-WP_012176483.1;Parent=gene-DOLE_RS15800;Dbxref=Genbank:WP_012176483.1;Name=WP_012176483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965547.1;locus_tag=DOLE_RS15800;product=DUF4242 domain-containing protein;protein_id=WP_012176483.1;transl_table=11 NC_009943.1 RefSeq gene 3679527 3679844 . + . ID=gene-DOLE_RS15805;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=DOLE_RS15805;old_locus_tag=Dole_3070 NC_009943.1 Protein Homology CDS 3679527 3679844 . + 0 ID=cds-WP_012176484.1;Parent=gene-DOLE_RS15805;Dbxref=Genbank:WP_012176484.1;Name=WP_012176484.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957651.1;locus_tag=DOLE_RS15805;product=thioredoxin;protein_id=WP_012176484.1;transl_table=11 NC_009943.1 RefSeq gene 3679948 3680082 . + . ID=gene-DOLE_RS18700;Name=DOLE_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18700 NC_009943.1 GeneMarkS-2+ CDS 3679948 3680082 . + 0 ID=cds-WP_269719150.1;Parent=gene-DOLE_RS18700;Dbxref=Genbank:WP_269719150.1;Name=WP_269719150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18700;product=hypothetical protein;protein_id=WP_269719150.1;transl_table=11 NC_009943.1 RefSeq gene 3680095 3681300 . + . ID=gene-DOLE_RS15810;Name=DOLE_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15810;old_locus_tag=Dole_3071 NC_009943.1 Protein Homology CDS 3680095 3681300 . + 0 ID=cds-WP_012176485.1;Parent=gene-DOLE_RS15810;Dbxref=Genbank:WP_012176485.1;Name=WP_012176485.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906040.1;locus_tag=DOLE_RS15810;product=FAD-dependent oxidoreductase;protein_id=WP_012176485.1;transl_table=11 NC_009943.1 RefSeq gene 3681365 3682015 . + . ID=gene-DOLE_RS15815;Name=DOLE_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15815;old_locus_tag=Dole_3072 NC_009943.1 Protein Homology CDS 3681365 3682015 . + 0 ID=cds-WP_012176486.1;Parent=gene-DOLE_RS15815;Dbxref=Genbank:WP_012176486.1;Name=WP_012176486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875441.1;locus_tag=DOLE_RS15815;product=DUF1638 domain-containing protein;protein_id=WP_012176486.1;transl_table=11 NC_009943.1 RefSeq gene 3682061 3683176 . + . ID=gene-DOLE_RS15820;Name=DOLE_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15820;old_locus_tag=Dole_3073 NC_009943.1 Protein Homology CDS 3682061 3683176 . + 0 ID=cds-WP_012176487.1;Parent=gene-DOLE_RS15820;Dbxref=Genbank:WP_012176487.1;Name=WP_012176487.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017743.2;locus_tag=DOLE_RS15820;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_012176487.1;transl_table=11 NC_009943.1 RefSeq gene 3683276 3684670 . - . ID=gene-DOLE_RS15825;Name=dctP;gbkey=Gene;gene=dctP;gene_biotype=protein_coding;locus_tag=DOLE_RS15825;old_locus_tag=Dole_3074 NC_009943.1 Protein Homology CDS 3683276 3684670 . - 0 ID=cds-WP_012176488.1;Parent=gene-DOLE_RS15825;Dbxref=Genbank:WP_012176488.1;Name=WP_012176488.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dctP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176492.1;locus_tag=DOLE_RS15825;product=TRAP transporter substrate-binding protein DctP;protein_id=WP_012176488.1;transl_table=11 NC_009943.1 RefSeq gene 3684707 3686017 . - . ID=gene-DOLE_RS15830;Name=DOLE_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15830;old_locus_tag=Dole_3075 NC_009943.1 Protein Homology CDS 3684707 3686017 . - 0 ID=cds-WP_012176489.1;Parent=gene-DOLE_RS15830;Dbxref=Genbank:WP_012176489.1;Name=WP_012176489.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: protein motif:HMM:NF018513.2;locus_tag=DOLE_RS15830;product=TRAP transporter large permease subunit;protein_id=WP_012176489.1;transl_table=11 NC_009943.1 RefSeq gene 3686043 3686549 . - . ID=gene-DOLE_RS17660;Name=DOLE_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17660;old_locus_tag=Dole_3076 NC_009943.1 Protein Homology CDS 3686043 3686549 . - 0 ID=cds-WP_012176490.1;Parent=gene-DOLE_RS17660;Dbxref=Genbank:WP_012176490.1;Name=WP_012176490.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016200.2;locus_tag=DOLE_RS17660;product=TRAP transporter small permease subunit;protein_id=WP_012176490.1;transl_table=11 NC_009943.1 RefSeq gene 3686568 3687425 . - . ID=gene-DOLE_RS17665;Name=DOLE_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17665;old_locus_tag=Dole_3077 NC_009943.1 Protein Homology CDS 3686568 3687425 . - 0 ID=cds-WP_012176491.1;Parent=gene-DOLE_RS17665;Dbxref=Genbank:WP_012176491.1;Name=WP_012176491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028121.2;locus_tag=DOLE_RS17665;product=TRAP transporter TatT component family protein;protein_id=WP_012176491.1;transl_table=11 NC_009943.1 RefSeq gene 3687713 3689110 . - . ID=gene-DOLE_RS15845;Name=dctP;gbkey=Gene;gene=dctP;gene_biotype=protein_coding;locus_tag=DOLE_RS15845;old_locus_tag=Dole_3078 NC_009943.1 Protein Homology CDS 3687713 3689110 . - 0 ID=cds-WP_012176492.1;Parent=gene-DOLE_RS15845;Dbxref=Genbank:WP_012176492.1;Name=WP_012176492.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dctP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176488.1;locus_tag=DOLE_RS15845;product=TRAP transporter substrate-binding protein DctP;protein_id=WP_012176492.1;transl_table=11 NC_009943.1 RefSeq gene 3689636 3690595 . + . ID=gene-DOLE_RS15850;Name=DOLE_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15850;old_locus_tag=Dole_3079 NC_009943.1 Protein Homology CDS 3689636 3690595 . + 0 ID=cds-WP_167320890.1;Parent=gene-DOLE_RS15850;Dbxref=Genbank:WP_167320890.1;Name=WP_167320890.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: protein motif:HMM:NF013972.2;locus_tag=DOLE_RS15850;product=START domain-containing protein;protein_id=WP_167320890.1;transl_table=11 NC_009943.1 RefSeq gene 3690602 3691342 . - . ID=gene-DOLE_RS15855;Name=DOLE_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15855;old_locus_tag=Dole_3080 NC_009943.1 GeneMarkS-2+ CDS 3690602 3691342 . - 0 ID=cds-WP_012176494.1;Parent=gene-DOLE_RS15855;Dbxref=Genbank:WP_012176494.1;Name=WP_012176494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15855;product=hypothetical protein;protein_id=WP_012176494.1;transl_table=11 NC_009943.1 RefSeq gene 3691435 3691968 . - . ID=gene-DOLE_RS15860;Name=DOLE_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15860;old_locus_tag=Dole_3081 NC_009943.1 Protein Homology CDS 3691435 3691968 . - 0 ID=cds-WP_012176495.1;Parent=gene-DOLE_RS15860;Dbxref=Genbank:WP_012176495.1;Name=WP_012176495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012791.2;locus_tag=DOLE_RS15860;product=universal stress protein;protein_id=WP_012176495.1;transl_table=11 NC_009943.1 RefSeq gene 3692099 3692587 . - . ID=gene-DOLE_RS15865;Name=DOLE_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15865;old_locus_tag=Dole_3082 NC_009943.1 Protein Homology CDS 3692099 3692587 . - 0 ID=cds-WP_012176496.1;Parent=gene-DOLE_RS15865;Dbxref=Genbank:WP_012176496.1;Name=WP_012176496.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021221.2;locus_tag=DOLE_RS15865;product=DUF4870 domain-containing protein;protein_id=WP_012176496.1;transl_table=11 NC_009943.1 RefSeq gene 3692618 3693550 . - . ID=gene-DOLE_RS15870;Name=DOLE_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15870;old_locus_tag=Dole_3083 NC_009943.1 Protein Homology CDS 3692618 3693550 . - 0 ID=cds-WP_041280643.1;Parent=gene-DOLE_RS15870;Dbxref=Genbank:WP_041280643.1;Name=WP_041280643.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024109.2;locus_tag=DOLE_RS15870;product=alpha/beta hydrolase;protein_id=WP_041280643.1;transl_table=11 NC_009943.1 RefSeq gene 3693703 3694596 . + . ID=gene-DOLE_RS15875;Name=DOLE_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15875;old_locus_tag=Dole_3084 NC_009943.1 GeneMarkS-2+ CDS 3693703 3694596 . + 0 ID=cds-WP_012176498.1;Parent=gene-DOLE_RS15875;Dbxref=Genbank:WP_012176498.1;Name=WP_012176498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15875;product=hypothetical protein;protein_id=WP_012176498.1;transl_table=11 NC_009943.1 RefSeq gene 3694910 3695827 . - . ID=gene-DOLE_RS15880;Name=DOLE_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15880;old_locus_tag=Dole_3085 NC_009943.1 GeneMarkS-2+ CDS 3694910 3695827 . - 0 ID=cds-WP_153304463.1;Parent=gene-DOLE_RS15880;Dbxref=Genbank:WP_153304463.1;Name=WP_153304463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15880;product=hypothetical protein;protein_id=WP_153304463.1;transl_table=11 NC_009943.1 RefSeq gene 3695854 3699225 . - . ID=gene-DOLE_RS15885;Name=DOLE_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15885;old_locus_tag=Dole_3086 NC_009943.1 GeneMarkS-2+ CDS 3695854 3699225 . - 0 ID=cds-WP_012176500.1;Parent=gene-DOLE_RS15885;Dbxref=Genbank:WP_012176500.1;Name=WP_012176500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15885;product=hypothetical protein;protein_id=WP_012176500.1;transl_table=11 NC_009943.1 RefSeq pseudogene 3699638 3699760 . - . ID=gene-DOLE_RS18645;Name=DOLE_RS18645;end_range=3699760,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DOLE_RS18645;partial=true;pseudo=true;start_range=.,3699638 NC_009943.1 Protein Homology CDS 3699638 3699760 . - 0 ID=cds-DOLE_RS18645;Parent=gene-DOLE_RS18645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3699760,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008328818.1;locus_tag=DOLE_RS18645;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,3699638;transl_table=11 NC_009943.1 RefSeq gene 3699741 3699953 . - . ID=gene-DOLE_RS17675;Name=DOLE_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17675;old_locus_tag=Dole_3087 NC_009943.1 Protein Homology CDS 3699741 3699953 . - 0 ID=cds-WP_012176501.1;Parent=gene-DOLE_RS17675;Dbxref=Genbank:WP_012176501.1;Name=WP_012176501.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=DOLE_RS17675;product=hypothetical protein;protein_id=WP_012176501.1;transl_table=11 NC_009943.1 RefSeq gene 3700144 3701211 . - . ID=gene-DOLE_RS15895;Name=DOLE_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15895;old_locus_tag=Dole_3088 NC_009943.1 Protein Homology CDS 3700144 3701211 . - 0 ID=cds-WP_012176502.1;Parent=gene-DOLE_RS15895;Dbxref=Genbank:WP_012176502.1;Name=WP_012176502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021759.2;locus_tag=DOLE_RS15895;product=DUF2786 domain-containing protein;protein_id=WP_012176502.1;transl_table=11 NC_009943.1 RefSeq gene 3701524 3702477 . - . ID=gene-DOLE_RS15900;Name=DOLE_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15900;old_locus_tag=Dole_3089 NC_009943.1 Protein Homology CDS 3701524 3702477 . - 0 ID=cds-WP_012176503.1;Parent=gene-DOLE_RS15900;Dbxref=Genbank:WP_012176503.1;Name=WP_012176503.1;Ontology_term=GO:0009307,GO:0000287,GO:0003677,GO:0009036;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF018339.2;locus_tag=DOLE_RS15900;product=BsuBI/PstI family type II restriction endonuclease;protein_id=WP_012176503.1;transl_table=11 NC_009943.1 RefSeq gene 3702474 3704057 . - . ID=gene-DOLE_RS15905;Name=DOLE_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15905;old_locus_tag=Dole_3090 NC_009943.1 Protein Homology CDS 3702474 3704057 . - 0 ID=cds-WP_012176504.1;Parent=gene-DOLE_RS15905;Dbxref=Genbank:WP_012176504.1;Name=WP_012176504.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967851.1;locus_tag=DOLE_RS15905;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_012176504.1;transl_table=11 NC_009943.1 RefSeq gene 3704359 3705375 . - . ID=gene-DOLE_RS15910;Name=DOLE_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15910;old_locus_tag=Dole_3091 NC_009943.1 Protein Homology CDS 3704359 3705375 . - 0 ID=cds-WP_012175873.1-3;Parent=gene-DOLE_RS15910;Dbxref=Genbank:WP_012175873.1;Name=WP_012175873.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015722803.1;locus_tag=DOLE_RS15910;product=IS5 family transposase;protein_id=WP_012175873.1;transl_table=11 NC_009943.1 RefSeq gene 3705548 3707923 . - . ID=gene-DOLE_RS15915;Name=DOLE_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15915;old_locus_tag=Dole_3092 NC_009943.1 Protein Homology CDS 3705548 3707923 . - 0 ID=cds-WP_012176505.1;Parent=gene-DOLE_RS15915;Dbxref=Genbank:WP_012176505.1;Name=WP_012176505.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=DOLE_RS15915;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012176505.1;transl_table=11 NC_009943.1 RefSeq gene 3707965 3708810 . - . ID=gene-DOLE_RS15920;Name=DOLE_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15920;old_locus_tag=Dole_3093 NC_009943.1 Protein Homology CDS 3707965 3708810 . - 0 ID=cds-WP_012176506.1;Parent=gene-DOLE_RS15920;Dbxref=Genbank:WP_012176506.1;Name=WP_012176506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025865.2;locus_tag=DOLE_RS15920;product=hypothetical protein;protein_id=WP_012176506.1;transl_table=11 NC_009943.1 RefSeq gene 3709084 3709659 . - . ID=gene-DOLE_RS15925;Name=DOLE_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15925;old_locus_tag=Dole_3094 NC_009943.1 Protein Homology CDS 3709084 3709659 . - 0 ID=cds-WP_012176507.1;Parent=gene-DOLE_RS15925;Dbxref=Genbank:WP_012176507.1;Name=WP_012176507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021165.2;locus_tag=DOLE_RS15925;product=diheme cytochrome c;protein_id=WP_012176507.1;transl_table=11 NC_009943.1 RefSeq gene 3709725 3710327 . - . ID=gene-DOLE_RS15930;Name=DOLE_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15930;old_locus_tag=Dole_3095 NC_009943.1 Protein Homology CDS 3709725 3710327 . - 0 ID=cds-WP_012176508.1;Parent=gene-DOLE_RS15930;Dbxref=Genbank:WP_012176508.1;Name=WP_012176508.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF014025.2;locus_tag=DOLE_RS15930;product=NAAT family transporter;protein_id=WP_012176508.1;transl_table=11 NC_009943.1 RefSeq gene 3710346 3711383 . - . ID=gene-DOLE_RS17680;Name=DOLE_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17680;old_locus_tag=Dole_3096 NC_009943.1 Protein Homology CDS 3710346 3711383 . - 0 ID=cds-WP_012176509.1;Parent=gene-DOLE_RS17680;Dbxref=Genbank:WP_012176509.1;Name=WP_012176509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965249.1;locus_tag=DOLE_RS17680;product=hypothetical protein;protein_id=WP_012176509.1;transl_table=11 NC_009943.1 RefSeq gene 3711364 3713577 . - . ID=gene-DOLE_RS15940;Name=DOLE_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15940;old_locus_tag=Dole_3097 NC_009943.1 Protein Homology CDS 3711364 3713577 . - 0 ID=cds-WP_012176510.1;Parent=gene-DOLE_RS15940;Dbxref=Genbank:WP_012176510.1;Name=WP_012176510.1;Ontology_term=GO:0032775,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965248.1;locus_tag=DOLE_RS15940;product=DNA adenine methylase;protein_id=WP_012176510.1;transl_table=11 NC_009943.1 RefSeq gene 3713643 3714212 . - . ID=gene-DOLE_RS18345;Name=DOLE_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18345;old_locus_tag=Dole_3098 NC_009943.1 GeneMarkS-2+ CDS 3713643 3714212 . - 0 ID=cds-WP_167320891.1;Parent=gene-DOLE_RS18345;Dbxref=Genbank:WP_167320891.1;Name=WP_167320891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18345;product=hypothetical protein;protein_id=WP_167320891.1;transl_table=11 NC_009943.1 RefSeq gene 3714199 3715395 . - . ID=gene-DOLE_RS15945;Name=DOLE_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15945;old_locus_tag=Dole_3099 NC_009943.1 GeneMarkS-2+ CDS 3714199 3715395 . - 0 ID=cds-WP_041280649.1;Parent=gene-DOLE_RS15945;Dbxref=Genbank:WP_041280649.1;Name=WP_041280649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15945;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_041280649.1;transl_table=11 NC_009943.1 RefSeq gene 3715644 3717602 . - . ID=gene-DOLE_RS15950;Name=DOLE_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15950;old_locus_tag=Dole_3100 NC_009943.1 Protein Homology CDS 3715644 3717602 . - 0 ID=cds-WP_012176513.1;Parent=gene-DOLE_RS15950;Dbxref=Genbank:WP_012176513.1;Name=WP_012176513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015904918.1;locus_tag=DOLE_RS15950;product=ASKHA domain-containing protein;protein_id=WP_012176513.1;transl_table=11 NC_009943.1 RefSeq gene 3717810 3718973 . - . ID=gene-DOLE_RS15955;Name=DOLE_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15955;old_locus_tag=Dole_3101 NC_009943.1 Protein Homology CDS 3717810 3718973 . - 0 ID=cds-WP_012176514.1;Parent=gene-DOLE_RS15955;Dbxref=Genbank:WP_012176514.1;Name=WP_012176514.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948235.1;locus_tag=DOLE_RS15955;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_012176514.1;transl_table=11 NC_009943.1 RefSeq gene 3719058 3720251 . - . ID=gene-DOLE_RS15960;Name=DOLE_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15960;old_locus_tag=Dole_3102 NC_009943.1 Protein Homology CDS 3719058 3720251 . - 0 ID=cds-WP_012176515.1;Parent=gene-DOLE_RS15960;Dbxref=Genbank:WP_012176515.1;Name=WP_012176515.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947089.1;locus_tag=DOLE_RS15960;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012176515.1;transl_table=11 NC_009943.1 RefSeq gene 3720308 3721402 . - . ID=gene-DOLE_RS15965;Name=DOLE_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15965;old_locus_tag=Dole_3103 NC_009943.1 Protein Homology CDS 3720308 3721402 . - 0 ID=cds-WP_012176516.1;Parent=gene-DOLE_RS15965;Dbxref=Genbank:WP_012176516.1;Name=WP_012176516.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015947090.1;locus_tag=DOLE_RS15965;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012176516.1;transl_table=11 NC_009943.1 RefSeq gene 3721605 3723170 . - . ID=gene-DOLE_RS15970;Name=dctP;gbkey=Gene;gene=dctP;gene_biotype=protein_coding;locus_tag=DOLE_RS15970;old_locus_tag=Dole_3104 NC_009943.1 Protein Homology CDS 3721605 3723170 . - 0 ID=cds-WP_232362717.1;Parent=gene-DOLE_RS15970;Dbxref=Genbank:WP_232362717.1;Name=WP_232362717.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dctP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176492.1;locus_tag=DOLE_RS15970;product=TRAP transporter substrate-binding protein DctP;protein_id=WP_232362717.1;transl_table=11 NC_009943.1 RefSeq gene 3723449 3724720 . - . ID=gene-DOLE_RS15975;Name=DOLE_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15975;old_locus_tag=Dole_3105 NC_009943.1 Protein Homology CDS 3723449 3724720 . - 0 ID=cds-WP_012176518.1;Parent=gene-DOLE_RS15975;Dbxref=Genbank:WP_012176518.1;Name=WP_012176518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013972.2;locus_tag=DOLE_RS15975;product=START domain-containing protein;protein_id=WP_012176518.1;transl_table=11 NC_009943.1 RefSeq gene 3724786 3725256 . - . ID=gene-DOLE_RS15980;Name=DOLE_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15980;old_locus_tag=Dole_3106 NC_009943.1 GeneMarkS-2+ CDS 3724786 3725256 . - 0 ID=cds-WP_012176519.1;Parent=gene-DOLE_RS15980;Dbxref=Genbank:WP_012176519.1;Name=WP_012176519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS15980;product=hypothetical protein;protein_id=WP_012176519.1;transl_table=11 NC_009943.1 RefSeq gene 3725651 3726220 . - . ID=gene-DOLE_RS15985;Name=DOLE_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15985;old_locus_tag=Dole_3107 NC_009943.1 Protein Homology CDS 3725651 3726220 . - 0 ID=cds-WP_012176520.1;Parent=gene-DOLE_RS15985;Dbxref=Genbank:WP_012176520.1;Name=WP_012176520.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014132.2;locus_tag=DOLE_RS15985;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_012176520.1;transl_table=11 NC_009943.1 RefSeq gene 3726455 3727147 . + . ID=gene-DOLE_RS17685;Name=DOLE_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17685;old_locus_tag=Dole_3108 NC_009943.1 Protein Homology CDS 3726455 3727147 . + 0 ID=cds-WP_167320892.1;Parent=gene-DOLE_RS17685;Dbxref=Genbank:WP_167320892.1;Name=WP_167320892.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=DOLE_RS17685;product=TetR/AcrR family transcriptional regulator;protein_id=WP_167320892.1;transl_table=11 NC_009943.1 RefSeq gene 3727205 3728065 . + . ID=gene-DOLE_RS15995;Name=DOLE_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS15995;old_locus_tag=Dole_3109 NC_009943.1 Protein Homology CDS 3727205 3728065 . + 0 ID=cds-WP_012176522.1;Parent=gene-DOLE_RS15995;Dbxref=Genbank:WP_012176522.1;Name=WP_012176522.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: protein motif:HMM:NF001319.0;locus_tag=DOLE_RS15995;product=shikimate dehydrogenase;protein_id=WP_012176522.1;transl_table=11 NC_009943.1 RefSeq gene 3728062 3728586 . + . ID=gene-DOLE_RS16000;Name=DOLE_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16000;old_locus_tag=Dole_3110 NC_009943.1 Protein Homology CDS 3728062 3728586 . + 0 ID=cds-WP_012176523.1;Parent=gene-DOLE_RS16000;Dbxref=Genbank:WP_012176523.1;Name=WP_012176523.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013375.2;locus_tag=DOLE_RS16000;product=shikimate kinase;protein_id=WP_012176523.1;transl_table=11 NC_009943.1 RefSeq gene 3728583 3729812 . + . ID=gene-DOLE_RS16005;Name=DOLE_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16005;old_locus_tag=Dole_3111 NC_009943.1 GeneMarkS-2+ CDS 3728583 3729812 . + 0 ID=cds-WP_012176524.1;Parent=gene-DOLE_RS16005;Dbxref=Genbank:WP_012176524.1;Name=WP_012176524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16005;product=hypothetical protein;protein_id=WP_012176524.1;transl_table=11 NC_009943.1 RefSeq gene 3730283 3731692 . - . ID=gene-DOLE_RS16010;Name=DOLE_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16010;old_locus_tag=Dole_3112 NC_009943.1 GeneMarkS-2+ CDS 3730283 3731692 . - 0 ID=cds-WP_012176525.1;Parent=gene-DOLE_RS16010;Dbxref=Genbank:WP_012176525.1;Name=WP_012176525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16010;product=hypothetical protein;protein_id=WP_012176525.1;transl_table=11 NC_009943.1 RefSeq gene 3731689 3733521 . - . ID=gene-DOLE_RS16015;Name=DOLE_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16015;old_locus_tag=Dole_3113 NC_009943.1 Protein Homology CDS 3731689 3733521 . - 0 ID=cds-WP_012176526.1;Parent=gene-DOLE_RS16015;Dbxref=Genbank:WP_012176526.1;Name=WP_012176526.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.2;locus_tag=DOLE_RS16015;product=tetratricopeptide repeat protein;protein_id=WP_012176526.1;transl_table=11 NC_009943.1 RefSeq gene 3733518 3734252 . - . ID=gene-DOLE_RS16020;Name=DOLE_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16020;old_locus_tag=Dole_3114 NC_009943.1 Protein Homology CDS 3733518 3734252 . - 0 ID=cds-WP_012176527.1;Parent=gene-DOLE_RS16020;Dbxref=Genbank:WP_012176527.1;Name=WP_012176527.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=DOLE_RS16020;product=polyprenol monophosphomannose synthase;protein_id=WP_012176527.1;transl_table=11 NC_009943.1 RefSeq gene 3734329 3735282 . - . ID=gene-DOLE_RS16025;Name=DOLE_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16025;old_locus_tag=Dole_3115 NC_009943.1 Protein Homology CDS 3734329 3735282 . - 0 ID=cds-WP_052294320.1;Parent=gene-DOLE_RS16025;Dbxref=Genbank:WP_052294320.1;Name=WP_052294320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024764.2;locus_tag=DOLE_RS16025;product=tetratricopeptide repeat protein;protein_id=WP_052294320.1;transl_table=11 NC_009943.1 RefSeq gene 3735585 3737219 . + . ID=gene-DOLE_RS16030;Name=DOLE_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16030;old_locus_tag=Dole_3116 NC_009943.1 Protein Homology CDS 3735585 3737219 . + 0 ID=cds-WP_012176529.1;Parent=gene-DOLE_RS16030;Dbxref=Genbank:WP_012176529.1;Name=WP_012176529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176530.1;locus_tag=DOLE_RS16030;product=PD40 domain-containing protein;protein_id=WP_012176529.1;transl_table=11 NC_009943.1 RefSeq gene 3737583 3739229 . + . ID=gene-DOLE_RS16035;Name=DOLE_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16035;old_locus_tag=Dole_3117 NC_009943.1 Protein Homology CDS 3737583 3739229 . + 0 ID=cds-WP_012176530.1;Parent=gene-DOLE_RS16035;Dbxref=Genbank:WP_012176530.1;Name=WP_012176530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176529.1;locus_tag=DOLE_RS16035;product=PD40 domain-containing protein;protein_id=WP_012176530.1;transl_table=11 NC_009943.1 RefSeq gene 3739324 3740031 . - . ID=gene-DOLE_RS16040;Name=DOLE_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16040;old_locus_tag=Dole_3118 NC_009943.1 Protein Homology CDS 3739324 3740031 . - 0 ID=cds-WP_012176531.1;Parent=gene-DOLE_RS16040;Dbxref=Genbank:WP_012176531.1;Name=WP_012176531.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=DOLE_RS16040;product=glycosyltransferase family 2 protein;protein_id=WP_012176531.1;transl_table=11 NC_009943.1 RefSeq gene 3740315 3741493 . + . ID=gene-DOLE_RS16045;Name=DOLE_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16045;old_locus_tag=Dole_3119 NC_009943.1 Protein Homology CDS 3740315 3741493 . + 0 ID=cds-WP_012176532.1;Parent=gene-DOLE_RS16045;Dbxref=Genbank:WP_012176532.1;Name=WP_012176532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176050.1;locus_tag=DOLE_RS16045;product=4Fe-4S binding protein;protein_id=WP_012176532.1;transl_table=11 NC_009943.1 RefSeq gene 3741640 3741867 . - . ID=gene-DOLE_RS16050;Name=DOLE_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16050 NC_009943.1 GeneMarkS-2+ CDS 3741640 3741867 . - 0 ID=cds-WP_041280651.1;Parent=gene-DOLE_RS16050;Dbxref=Genbank:WP_041280651.1;Name=WP_041280651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16050;product=hypothetical protein;protein_id=WP_041280651.1;transl_table=11 NC_009943.1 RefSeq gene 3741963 3742511 . - . ID=gene-DOLE_RS16055;Name=DOLE_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16055;old_locus_tag=Dole_3120 NC_009943.1 Protein Homology CDS 3741963 3742511 . - 0 ID=cds-WP_012176533.1;Parent=gene-DOLE_RS16055;Dbxref=Genbank:WP_012176533.1;Name=WP_012176533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948333.1;locus_tag=DOLE_RS16055;product=hypothetical protein;protein_id=WP_012176533.1;transl_table=11 NC_009943.1 RefSeq gene 3742508 3743887 . - . ID=gene-DOLE_RS16060;Name=DOLE_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16060;old_locus_tag=Dole_3121 NC_009943.1 Protein Homology CDS 3742508 3743887 . - 0 ID=cds-WP_012176534.1;Parent=gene-DOLE_RS16060;Dbxref=Genbank:WP_012176534.1;Name=WP_012176534.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024601.2;locus_tag=DOLE_RS16060;product=VWA-like domain-containing protein;protein_id=WP_012176534.1;transl_table=11 NC_009943.1 RefSeq gene 3743884 3745047 . - . ID=gene-DOLE_RS16065;Name=DOLE_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16065;old_locus_tag=Dole_3122 NC_009943.1 Protein Homology CDS 3743884 3745047 . - 0 ID=cds-WP_012176535.1;Parent=gene-DOLE_RS16065;Dbxref=Genbank:WP_012176535.1;Name=WP_012176535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948335.1;locus_tag=DOLE_RS16065;product=hypothetical protein;protein_id=WP_012176535.1;transl_table=11 NC_009943.1 RefSeq gene 3745122 3746828 . - . ID=gene-DOLE_RS16070;Name=DOLE_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16070;old_locus_tag=Dole_3123 NC_009943.1 Protein Homology CDS 3745122 3746828 . - 0 ID=cds-WP_012176536.1;Parent=gene-DOLE_RS16070;Dbxref=Genbank:WP_012176536.1;Name=WP_012176536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948336.1;locus_tag=DOLE_RS16070;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012176536.1;transl_table=11 NC_009943.1 RefSeq gene 3747086 3747802 . - . ID=gene-DOLE_RS16075;Name=DOLE_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16075;old_locus_tag=Dole_3124 NC_009943.1 Protein Homology CDS 3747086 3747802 . - 0 ID=cds-WP_012176537.1;Parent=gene-DOLE_RS16075;Dbxref=Genbank:WP_012176537.1;Name=WP_012176537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905547.1;locus_tag=DOLE_RS16075;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012176537.1;transl_table=11 NC_009943.1 RefSeq gene 3747909 3749987 . - . ID=gene-DOLE_RS16080;Name=DOLE_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16080;old_locus_tag=Dole_3125 NC_009943.1 Protein Homology CDS 3747909 3749987 . - 0 ID=cds-WP_153304467.1;Parent=gene-DOLE_RS16080;Dbxref=Genbank:WP_153304467.1;Name=WP_153304467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176539.1;locus_tag=DOLE_RS16080;product=sigma-54 dependent transcriptional regulator;protein_id=WP_153304467.1;transl_table=11 NC_009943.1 RefSeq gene 3750017 3752071 . - . ID=gene-DOLE_RS16085;Name=DOLE_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16085;old_locus_tag=Dole_3126 NC_009943.1 Protein Homology CDS 3750017 3752071 . - 0 ID=cds-WP_012176539.1;Parent=gene-DOLE_RS16085;Dbxref=Genbank:WP_012176539.1;Name=WP_012176539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173790.1;locus_tag=DOLE_RS16085;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_012176539.1;transl_table=11 NC_009943.1 RefSeq gene 3752334 3753815 . + . ID=gene-DOLE_RS16090;Name=DOLE_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16090;old_locus_tag=Dole_3127 NC_009943.1 Protein Homology CDS 3752334 3753815 . + 0 ID=cds-WP_012176540.1;Parent=gene-DOLE_RS16090;Dbxref=Genbank:WP_012176540.1;Name=WP_012176540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040521.1;locus_tag=DOLE_RS16090;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_012176540.1;transl_table=11 NC_009943.1 RefSeq gene 3754084 3755643 . + . ID=gene-DOLE_RS16095;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=DOLE_RS16095;old_locus_tag=Dole_3128 NC_009943.1 Protein Homology CDS 3754084 3755643 . + 0 ID=cds-WP_041280653.1;Parent=gene-DOLE_RS16095;Dbxref=Genbank:WP_041280653.1;Name=WP_041280653.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: protein motif:HMM:TIGR00546.1;locus_tag=DOLE_RS16095;product=apolipoprotein N-acyltransferase;protein_id=WP_041280653.1;transl_table=11 NC_009943.1 RefSeq gene 3755768 3756724 . - . ID=gene-DOLE_RS16100;Name=DOLE_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16100;old_locus_tag=Dole_3129 NC_009943.1 GeneMarkS-2+ CDS 3755768 3756724 . - 0 ID=cds-WP_012176542.1;Parent=gene-DOLE_RS16100;Dbxref=Genbank:WP_012176542.1;Name=WP_012176542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16100;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012176542.1;transl_table=11 NC_009943.1 RefSeq gene 3756732 3758180 . - . ID=gene-DOLE_RS16105;Name=DOLE_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16105;old_locus_tag=Dole_3130 NC_009943.1 Protein Homology CDS 3756732 3758180 . - 0 ID=cds-WP_012176543.1;Parent=gene-DOLE_RS16105;Dbxref=Genbank:WP_012176543.1;Name=WP_012176543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017569.2;locus_tag=DOLE_RS16105;product=VWA domain-containing protein;protein_id=WP_012176543.1;transl_table=11 NC_009943.1 RefSeq gene 3758173 3759084 . - . ID=gene-DOLE_RS16110;Name=DOLE_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16110;old_locus_tag=Dole_3131 NC_009943.1 Protein Homology CDS 3758173 3759084 . - 0 ID=cds-WP_012176544.1;Parent=gene-DOLE_RS16110;Dbxref=Genbank:WP_012176544.1;Name=WP_012176544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946826.1;locus_tag=DOLE_RS16110;product=MoxR family ATPase;protein_id=WP_012176544.1;transl_table=11 NC_009943.1 RefSeq gene 3759538 3760434 . + . ID=gene-DOLE_RS16115;Name=DOLE_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16115;old_locus_tag=Dole_3132 NC_009943.1 Protein Homology CDS 3759538 3760434 . + 0 ID=cds-WP_012176545.1;Parent=gene-DOLE_RS16115;Dbxref=Genbank:WP_012176545.1;Name=WP_012176545.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024634.2;locus_tag=DOLE_RS16115;product=4Fe-4S binding protein;protein_id=WP_012176545.1;transl_table=11 NC_009943.1 RefSeq gene 3760488 3763508 . - . ID=gene-DOLE_RS17690;Name=DOLE_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17690;old_locus_tag=Dole_3133 NC_009943.1 Protein Homology CDS 3760488 3763508 . - 0 ID=cds-WP_012176546.1;Parent=gene-DOLE_RS17690;Dbxref=Genbank:WP_012176546.1;Name=WP_012176546.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012321.2;locus_tag=DOLE_RS17690;product=VWA domain-containing protein;protein_id=WP_012176546.1;transl_table=11 NC_009943.1 RefSeq gene 3763515 3764357 . - . ID=gene-DOLE_RS16125;Name=DOLE_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16125;old_locus_tag=Dole_3134 NC_009943.1 Protein Homology CDS 3763515 3764357 . - 0 ID=cds-WP_012176547.1;Parent=gene-DOLE_RS16125;Dbxref=Genbank:WP_012176547.1;Name=WP_012176547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163460.1;locus_tag=DOLE_RS16125;product=CbbQ/NirQ/NorQ/GpvN family protein;protein_id=WP_012176547.1;transl_table=11 NC_009943.1 RefSeq gene 3764529 3764918 . - . ID=gene-DOLE_RS17695;Name=DOLE_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17695;old_locus_tag=Dole_3135 NC_009943.1 Protein Homology CDS 3764529 3764918 . - 0 ID=cds-WP_012176548.1;Parent=gene-DOLE_RS17695;Dbxref=Genbank:WP_012176548.1;Name=WP_012176548.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=DOLE_RS17695;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012176548.1;transl_table=11 NC_009943.1 RefSeq gene 3764915 3765172 . - . ID=gene-DOLE_RS16135;Name=DOLE_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16135;old_locus_tag=Dole_3136 NC_009943.1 GeneMarkS-2+ CDS 3764915 3765172 . - 0 ID=cds-WP_012176549.1;Parent=gene-DOLE_RS16135;Dbxref=Genbank:WP_012176549.1;Name=WP_012176549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16135;product=hypothetical protein;protein_id=WP_012176549.1;transl_table=11 NC_009943.1 RefSeq gene 3765494 3766750 . + . ID=gene-DOLE_RS16140;Name=DOLE_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16140;old_locus_tag=Dole_3137 NC_009943.1 Protein Homology CDS 3765494 3766750 . + 0 ID=cds-WP_012176550.1;Parent=gene-DOLE_RS16140;Dbxref=Genbank:WP_012176550.1;Name=WP_012176550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=DOLE_RS16140;product=ATP-binding protein;protein_id=WP_012176550.1;transl_table=11 NC_009943.1 RefSeq gene 3767017 3767610 . + . ID=gene-DOLE_RS16145;Name=DOLE_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16145;old_locus_tag=Dole_3138 NC_009943.1 Protein Homology CDS 3767017 3767610 . + 0 ID=cds-WP_012176551.1;Parent=gene-DOLE_RS16145;Dbxref=Genbank:WP_012176551.1;Name=WP_012176551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024734.2;locus_tag=DOLE_RS16145;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_012176551.1;transl_table=11 NC_009943.1 RefSeq gene 3767607 3768524 . + . ID=gene-DOLE_RS16150;Name=DOLE_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16150;old_locus_tag=Dole_3139 NC_009943.1 Protein Homology CDS 3767607 3768524 . + 0 ID=cds-WP_012176552.1;Parent=gene-DOLE_RS16150;Dbxref=Genbank:WP_012176552.1;Name=WP_012176552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.2;locus_tag=DOLE_RS16150;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_012176552.1;transl_table=11 NC_009943.1 RefSeq gene 3768737 3769450 . - . ID=gene-DOLE_RS17700;Name=DOLE_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17700;old_locus_tag=Dole_3140 NC_009943.1 GeneMarkS-2+ CDS 3768737 3769450 . - 0 ID=cds-WP_012176553.1;Parent=gene-DOLE_RS17700;Dbxref=Genbank:WP_012176553.1;Name=WP_012176553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS17700;product=hypothetical protein;protein_id=WP_012176553.1;transl_table=11 NC_009943.1 RefSeq gene 3769458 3772319 . - . ID=gene-DOLE_RS16160;Name=DOLE_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16160;old_locus_tag=Dole_3141 NC_009943.1 Protein Homology CDS 3769458 3772319 . - 0 ID=cds-WP_041280655.1;Parent=gene-DOLE_RS16160;Dbxref=Genbank:WP_041280655.1;Name=WP_041280655.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=DOLE_RS16160;product=N-6 DNA methylase;protein_id=WP_041280655.1;transl_table=11 NC_009943.1 RefSeq gene 3772404 3773156 . - . ID=gene-DOLE_RS16165;Name=DOLE_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16165 NC_009943.1 Protein Homology CDS 3772404 3773156 . - 0 ID=cds-WP_153304468.1;Parent=gene-DOLE_RS16165;Dbxref=Genbank:WP_153304468.1;Name=WP_153304468.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=DOLE_RS16165;product=MerR family transcriptional regulator;protein_id=WP_153304468.1;transl_table=11 NC_009943.1 RefSeq gene 3773189 3773521 . + . ID=gene-DOLE_RS16170;Name=DOLE_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16170;old_locus_tag=Dole_3144 NC_009943.1 GeneMarkS-2+ CDS 3773189 3773521 . + 0 ID=cds-WP_012176557.1;Parent=gene-DOLE_RS16170;Dbxref=Genbank:WP_012176557.1;Name=WP_012176557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16170;product=hypothetical protein;protein_id=WP_012176557.1;transl_table=11 NC_009943.1 RefSeq gene 3773594 3774511 . - . ID=gene-DOLE_RS16175;Name=DOLE_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16175;old_locus_tag=Dole_3145 NC_009943.1 GeneMarkS-2+ CDS 3773594 3774511 . - 0 ID=cds-WP_012176558.1;Parent=gene-DOLE_RS16175;Dbxref=Genbank:WP_012176558.1;Name=WP_012176558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16175;product=hypothetical protein;protein_id=WP_012176558.1;transl_table=11 NC_009943.1 RefSeq gene 3774528 3775016 . - . ID=gene-DOLE_RS16180;Name=DOLE_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16180;old_locus_tag=Dole_3146 NC_009943.1 GeneMarkS-2+ CDS 3774528 3775016 . - 0 ID=cds-WP_012176559.1;Parent=gene-DOLE_RS16180;Dbxref=Genbank:WP_012176559.1;Name=WP_012176559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16180;product=hypothetical protein;protein_id=WP_012176559.1;transl_table=11 NC_009943.1 RefSeq gene 3775032 3778142 . - . ID=gene-DOLE_RS16185;Name=DOLE_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16185;old_locus_tag=Dole_3147 NC_009943.1 GeneMarkS-2+ CDS 3775032 3778142 . - 0 ID=cds-WP_012176560.1;Parent=gene-DOLE_RS16185;Dbxref=Genbank:WP_012176560.1;Name=WP_012176560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16185;product=GAF domain-containing sensor histidine kinase;protein_id=WP_012176560.1;transl_table=11 NC_009943.1 RefSeq gene 3778174 3778653 . - . ID=gene-DOLE_RS16190;Name=DOLE_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16190;old_locus_tag=Dole_3148 NC_009943.1 GeneMarkS-2+ CDS 3778174 3778653 . - 0 ID=cds-WP_153304469.1;Parent=gene-DOLE_RS16190;Dbxref=Genbank:WP_153304469.1;Name=WP_153304469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16190;product=hypothetical protein;protein_id=WP_153304469.1;transl_table=11 NC_009943.1 RefSeq gene 3778858 3779124 . + . ID=gene-DOLE_RS16195;Name=DOLE_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16195;old_locus_tag=Dole_3149 NC_009943.1 GeneMarkS-2+ CDS 3778858 3779124 . + 0 ID=cds-WP_012176562.1;Parent=gene-DOLE_RS16195;Dbxref=Genbank:WP_012176562.1;Name=WP_012176562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16195;product=single-stranded DNA-binding protein;protein_id=WP_012176562.1;transl_table=11 NC_009943.1 RefSeq gene 3779144 3779482 . + . ID=gene-DOLE_RS16200;Name=DOLE_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16200;old_locus_tag=Dole_3150 NC_009943.1 Protein Homology CDS 3779144 3779482 . + 0 ID=cds-WP_041280659.1;Parent=gene-DOLE_RS16200;Dbxref=Genbank:WP_041280659.1;Name=WP_041280659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967514.1;locus_tag=DOLE_RS16200;product=DUF2958 domain-containing protein;protein_id=WP_041280659.1;transl_table=11 NC_009943.1 RefSeq gene 3779556 3779738 . + . ID=gene-DOLE_RS16205;Name=DOLE_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16205;old_locus_tag=Dole_3151 NC_009943.1 Protein Homology CDS 3779556 3779738 . + 0 ID=cds-WP_012176564.1;Parent=gene-DOLE_RS16205;Dbxref=Genbank:WP_012176564.1;Name=WP_012176564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071412.1;locus_tag=DOLE_RS16205;product=hypothetical protein;protein_id=WP_012176564.1;transl_table=11 NC_009943.1 RefSeq gene 3779875 3780054 . + . ID=gene-DOLE_RS16210;Name=DOLE_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16210 NC_009943.1 GeneMarkS-2+ CDS 3779875 3780054 . + 0 ID=cds-WP_041280660.1;Parent=gene-DOLE_RS16210;Dbxref=Genbank:WP_041280660.1;Name=WP_041280660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16210;product=hypothetical protein;protein_id=WP_041280660.1;transl_table=11 NC_009943.1 RefSeq gene 3780343 3780648 . + . ID=gene-DOLE_RS18705;Name=DOLE_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18705;old_locus_tag=Dole_3153 NC_009943.1 Protein Homology CDS 3780343 3780648 . + 0 ID=cds-WP_012176566.1;Parent=gene-DOLE_RS18705;Dbxref=Genbank:WP_012176566.1;Name=WP_012176566.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=DOLE_RS18705;product=tyrosine-type recombinase/integrase;protein_id=WP_012176566.1;transl_table=11 NC_009943.1 RefSeq gene 3780695 3780771 . - . ID=gene-DOLE_RS16220;Name=DOLE_RS16220;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS16220;old_locus_tag=Dole_R0049 NC_009943.1 tRNAscan-SE tRNA 3780695 3780771 . - . ID=rna-DOLE_RS16220;Parent=gene-DOLE_RS16220;anticodon=(pos:complement(3780735..3780737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16220;product=tRNA-Arg NC_009943.1 tRNAscan-SE exon 3780695 3780771 . - . ID=exon-DOLE_RS16220-1;Parent=rna-DOLE_RS16220;anticodon=(pos:complement(3780735..3780737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16220;product=tRNA-Arg NC_009943.1 RefSeq gene 3780822 3780897 . - . ID=gene-DOLE_RS16225;Name=DOLE_RS16225;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS16225;old_locus_tag=Dole_R0050 NC_009943.1 tRNAscan-SE tRNA 3780822 3780897 . - . ID=rna-DOLE_RS16225;Parent=gene-DOLE_RS16225;anticodon=(pos:complement(3780862..3780864));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16225;product=tRNA-His NC_009943.1 tRNAscan-SE exon 3780822 3780897 . - . ID=exon-DOLE_RS16225-1;Parent=rna-DOLE_RS16225;anticodon=(pos:complement(3780862..3780864));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16225;product=tRNA-His NC_009943.1 RefSeq gene 3780983 3781870 . - . ID=gene-DOLE_RS16230;Name=DOLE_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16230;old_locus_tag=Dole_3154 NC_009943.1 Protein Homology CDS 3780983 3781870 . - 0 ID=cds-WP_012176567.1;Parent=gene-DOLE_RS16230;Dbxref=Genbank:WP_012176567.1;Name=WP_012176567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028121.2;locus_tag=DOLE_RS16230;product=TRAP transporter TatT component family protein;protein_id=WP_012176567.1;transl_table=11 NC_009943.1 RefSeq gene 3781940 3783247 . - . ID=gene-DOLE_RS16235;Name=DOLE_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16235;old_locus_tag=Dole_3155 NC_009943.1 Protein Homology CDS 3781940 3783247 . - 0 ID=cds-WP_012176568.1;Parent=gene-DOLE_RS16235;Dbxref=Genbank:WP_012176568.1;Name=WP_012176568.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015946956.1;locus_tag=DOLE_RS16235;product=TRAP transporter large permease subunit;protein_id=WP_012176568.1;transl_table=11 NC_009943.1 RefSeq gene 3783293 3783823 . - . ID=gene-DOLE_RS16240;Name=DOLE_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16240;old_locus_tag=Dole_3156 NC_009943.1 Protein Homology CDS 3783293 3783823 . - 0 ID=cds-WP_012176569.1;Parent=gene-DOLE_RS16240;Dbxref=Genbank:WP_012176569.1;Name=WP_012176569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016200.2;locus_tag=DOLE_RS16240;product=TRAP transporter small permease;protein_id=WP_012176569.1;transl_table=11 NC_009943.1 RefSeq gene 3783820 3784869 . - . ID=gene-DOLE_RS16245;Name=dctP;gbkey=Gene;gene=dctP;gene_biotype=protein_coding;locus_tag=DOLE_RS16245;old_locus_tag=Dole_3157 NC_009943.1 Protein Homology CDS 3783820 3784869 . - 0 ID=cds-WP_012176570.1;Parent=gene-DOLE_RS16245;Dbxref=Genbank:WP_012176570.1;Name=WP_012176570.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dctP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF037995.1;locus_tag=DOLE_RS16245;product=TRAP transporter substrate-binding protein DctP;protein_id=WP_012176570.1;transl_table=11 NC_009943.1 RefSeq gene 3784869 3785393 . - . ID=gene-DOLE_RS16250;Name=DOLE_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16250;old_locus_tag=Dole_3158 NC_009943.1 Protein Homology CDS 3784869 3785393 . - 0 ID=cds-WP_012176571.1;Parent=gene-DOLE_RS16250;Dbxref=Genbank:WP_012176571.1;Name=WP_012176571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013162768.1;locus_tag=DOLE_RS16250;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_012176571.1;transl_table=11 NC_009943.1 RefSeq gene 3785401 3786696 . - . ID=gene-DOLE_RS16255;Name=DOLE_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16255;old_locus_tag=Dole_3159 NC_009943.1 Protein Homology CDS 3785401 3786696 . - 0 ID=cds-WP_012176572.1;Parent=gene-DOLE_RS16255;Dbxref=Genbank:WP_012176572.1;Name=WP_012176572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176572.1;locus_tag=DOLE_RS16255;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_012176572.1;transl_table=11 NC_009943.1 RefSeq gene 3786707 3787564 . - . ID=gene-DOLE_RS16260;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=DOLE_RS16260;old_locus_tag=Dole_3160 NC_009943.1 Protein Homology CDS 3786707 3787564 . - 0 ID=cds-WP_041280662.1;Parent=gene-DOLE_RS16260;Dbxref=Genbank:WP_041280662.1;Name=WP_041280662.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: protein motif:HMM:TIGR00652.1;locus_tag=DOLE_RS16260;product=diaminopimelate epimerase;protein_id=WP_041280662.1;transl_table=11 NC_009943.1 RefSeq gene 3787695 3788522 . + . ID=gene-DOLE_RS16265;Name=DOLE_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16265;old_locus_tag=Dole_3161 NC_009943.1 Protein Homology CDS 3787695 3788522 . + 0 ID=cds-WP_012176574.1;Parent=gene-DOLE_RS16265;Dbxref=Genbank:WP_012176574.1;Name=WP_012176574.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878046.1;locus_tag=DOLE_RS16265;product=acyl-CoA dehydratase activase;protein_id=WP_012176574.1;transl_table=11 NC_009943.1 RefSeq gene 3788637 3790355 . + . ID=gene-DOLE_RS16270;Name=DOLE_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16270;old_locus_tag=Dole_3162 NC_009943.1 Protein Homology CDS 3788637 3790355 . + 0 ID=cds-WP_012176575.1;Parent=gene-DOLE_RS16270;Dbxref=Genbank:WP_012176575.1;Name=WP_012176575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006967432.1;locus_tag=DOLE_RS16270;product=hydantoinase/oxoprolinase family protein;protein_id=WP_012176575.1;transl_table=11 NC_009943.1 RefSeq gene 3790349 3791665 . + . ID=gene-DOLE_RS16275;Name=DOLE_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16275;old_locus_tag=Dole_3163 NC_009943.1 Protein Homology CDS 3790349 3791665 . + 0 ID=cds-WP_012176576.1;Parent=gene-DOLE_RS16275;Dbxref=Genbank:WP_012176576.1;Name=WP_012176576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878687.1;locus_tag=DOLE_RS16275;product=histone deacetylase;protein_id=WP_012176576.1;transl_table=11 NC_009943.1 RefSeq gene 3791678 3792583 . + . ID=gene-DOLE_RS16280;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=DOLE_RS16280;old_locus_tag=Dole_3164 NC_009943.1 Protein Homology CDS 3791678 3792583 . + 0 ID=cds-WP_012176577.1;Parent=gene-DOLE_RS16280;Dbxref=Genbank:WP_012176577.1;Name=WP_012176577.1;Ontology_term=GO:0006430,GO:0000166,GO:0004824,GO:0005524;gbkey=CDS;gene=epmA;go_function=nucleotide binding|0000166||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588052.1;locus_tag=DOLE_RS16280;product=EF-P lysine aminoacylase EpmA;protein_id=WP_012176577.1;transl_table=11 NC_009943.1 RefSeq gene 3793279 3793992 . + . ID=gene-DOLE_RS16285;Name=DOLE_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16285;old_locus_tag=Dole_3165 NC_009943.1 Protein Homology CDS 3793279 3793992 . + 0 ID=cds-WP_012176578.1;Parent=gene-DOLE_RS16285;Dbxref=Genbank:WP_012176578.1;Name=WP_012176578.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024109.2;locus_tag=DOLE_RS16285;product=alpha/beta fold hydrolase;protein_id=WP_012176578.1;transl_table=11 NC_009943.1 RefSeq gene 3794140 3794367 . + . ID=gene-DOLE_RS16290;Name=DOLE_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16290;old_locus_tag=Dole_3166 NC_009943.1 Protein Homology CDS 3794140 3794367 . + 0 ID=cds-WP_012176579.1;Parent=gene-DOLE_RS16290;Dbxref=Genbank:WP_012176579.1;Name=WP_012176579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006966068.1;locus_tag=DOLE_RS16290;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_012176579.1;transl_table=11 NC_009943.1 RefSeq gene 3794364 3794771 . + . ID=gene-DOLE_RS16295;Name=DOLE_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16295;old_locus_tag=Dole_3167 NC_009943.1 Protein Homology CDS 3794364 3794771 . + 0 ID=cds-WP_012176580.1;Parent=gene-DOLE_RS16295;Dbxref=Genbank:WP_012176580.1;Name=WP_012176580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008870913.1;locus_tag=DOLE_RS16295;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012176580.1;transl_table=11 NC_009943.1 RefSeq gene 3794856 3796250 . + . ID=gene-DOLE_RS16300;Name=dctP;gbkey=Gene;gene=dctP;gene_biotype=protein_coding;locus_tag=DOLE_RS16300;old_locus_tag=Dole_3168 NC_009943.1 Protein Homology CDS 3794856 3796250 . + 0 ID=cds-WP_012176581.1;Parent=gene-DOLE_RS16300;Dbxref=Genbank:WP_012176581.1;Name=WP_012176581.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dctP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF015445.2;locus_tag=DOLE_RS16300;product=TRAP transporter substrate-binding protein DctP;protein_id=WP_012176581.1;transl_table=11 NC_009943.1 RefSeq gene 3796629 3797957 . - . ID=gene-DOLE_RS16305;Name=DOLE_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16305;old_locus_tag=Dole_3169 NC_009943.1 Protein Homology CDS 3796629 3797957 . - 0 ID=cds-WP_012176582.1;Parent=gene-DOLE_RS16305;Dbxref=Genbank:WP_012176582.1;Name=WP_012176582.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013056.2;locus_tag=DOLE_RS16305;product=NCS2 family permease;protein_id=WP_012176582.1;transl_table=11 NC_009943.1 RefSeq gene 3798075 3798557 . - . ID=gene-DOLE_RS16310;Name=DOLE_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16310;old_locus_tag=Dole_3170 NC_009943.1 Protein Homology CDS 3798075 3798557 . - 0 ID=cds-WP_012176583.1;Parent=gene-DOLE_RS16310;Dbxref=Genbank:WP_012176583.1;Name=WP_012176583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906024.1;locus_tag=DOLE_RS16310;product=cytochrome c3 family protein;protein_id=WP_012176583.1;transl_table=11 NC_009943.1 RefSeq gene 3798675 3799448 . - . ID=gene-DOLE_RS16315;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=DOLE_RS16315;old_locus_tag=Dole_3171 NC_009943.1 Protein Homology CDS 3798675 3799448 . - 0 ID=cds-WP_012176584.1;Parent=gene-DOLE_RS16315;Dbxref=Genbank:WP_012176584.1;Name=WP_012176584.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906023.1;locus_tag=DOLE_RS16315;product=twin-arginine translocase subunit TatC;protein_id=WP_012176584.1;transl_table=11 NC_009943.1 RefSeq gene 3799441 3799809 . - . ID=gene-DOLE_RS16320;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=DOLE_RS16320;old_locus_tag=Dole_3172 NC_009943.1 Protein Homology CDS 3799441 3799809 . - 0 ID=cds-WP_012176585.1;Parent=gene-DOLE_RS16320;Dbxref=Genbank:WP_012176585.1;Name=WP_012176585.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956087.1;locus_tag=DOLE_RS16320;product=Sec-independent protein translocase protein TatB;protein_id=WP_012176585.1;transl_table=11 NC_009943.1 RefSeq gene 3799851 3800327 . - . ID=gene-DOLE_RS16325;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=DOLE_RS16325;old_locus_tag=Dole_3173 NC_009943.1 Protein Homology CDS 3799851 3800327 . - 0 ID=cds-WP_012176586.1;Parent=gene-DOLE_RS16325;Dbxref=Genbank:WP_012176586.1;Name=WP_012176586.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724661.1;locus_tag=DOLE_RS16325;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_012176586.1;transl_table=11 NC_009943.1 RefSeq gene 3800373 3800735 . - . ID=gene-DOLE_RS16330;Name=DOLE_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16330;old_locus_tag=Dole_3174 NC_009943.1 Protein Homology CDS 3800373 3800735 . - 0 ID=cds-WP_012176587.1;Parent=gene-DOLE_RS16330;Dbxref=Genbank:WP_012176587.1;Name=WP_012176587.1;Ontology_term=GO:0006777;gbkey=CDS;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589127.1;locus_tag=DOLE_RS16330;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_012176587.1;transl_table=11 NC_009943.1 RefSeq gene 3800807 3801415 . - . ID=gene-DOLE_RS16335;Name=DOLE_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16335;old_locus_tag=Dole_3175 NC_009943.1 Protein Homology CDS 3800807 3801415 . - 0 ID=cds-WP_012176588.1;Parent=gene-DOLE_RS16335;Dbxref=Genbank:WP_012176588.1;Name=WP_012176588.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024214.2;locus_tag=DOLE_RS16335;product=molybdenum cofactor guanylyltransferase;protein_id=WP_012176588.1;transl_table=11 NC_009943.1 RefSeq gene 3801699 3802106 . + . ID=gene-DOLE_RS16340;Name=DOLE_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16340;old_locus_tag=Dole_3176 NC_009943.1 Protein Homology CDS 3801699 3802106 . + 0 ID=cds-WP_012176589.1;Parent=gene-DOLE_RS16340;Dbxref=Genbank:WP_012176589.1;Name=WP_012176589.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS16340;product=PilZ domain-containing protein;protein_id=WP_012176589.1;transl_table=11 NC_009943.1 RefSeq gene 3802245 3802799 . + . ID=gene-DOLE_RS16345;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=DOLE_RS16345;old_locus_tag=Dole_3177 NC_009943.1 Protein Homology CDS 3802245 3802799 . + 0 ID=cds-WP_012176590.1;Parent=gene-DOLE_RS16345;Dbxref=Genbank:WP_012176590.1;Name=WP_012176590.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: protein motif:HMM:TIGR00336.1;locus_tag=DOLE_RS16345;product=orotate phosphoribosyltransferase;protein_id=WP_012176590.1;transl_table=11 NC_009943.1 RefSeq gene 3802913 3804649 . + . ID=gene-DOLE_RS16350;Name=DOLE_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16350;old_locus_tag=Dole_3178 NC_009943.1 Protein Homology CDS 3802913 3804649 . + 0 ID=cds-WP_012176591.1;Parent=gene-DOLE_RS16350;Dbxref=Genbank:WP_012176591.1;Name=WP_012176591.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013046.2;locus_tag=DOLE_RS16350;product=histone deacetylase family protein;protein_id=WP_012176591.1;transl_table=11 NC_009943.1 RefSeq gene 3804788 3805366 . + . ID=gene-DOLE_RS16355;Name=DOLE_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16355;old_locus_tag=Dole_3179 NC_009943.1 Protein Homology CDS 3804788 3805366 . + 0 ID=cds-WP_012176592.1;Parent=gene-DOLE_RS16355;Dbxref=Genbank:WP_012176592.1;Name=WP_012176592.1;Ontology_term=GO:0016311;gbkey=CDS;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: protein motif:HMM:NF015142.2;locus_tag=DOLE_RS16355;product=dual specificity protein phosphatase family protein;protein_id=WP_012176592.1;transl_table=11 NC_009943.1 RefSeq gene 3805424 3807940 . + . ID=gene-DOLE_RS16360;Name=DOLE_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16360;old_locus_tag=Dole_3180 NC_009943.1 Protein Homology CDS 3805424 3807940 . + 0 ID=cds-WP_012176593.1;Parent=gene-DOLE_RS16360;Dbxref=Genbank:WP_012176593.1;Name=WP_012176593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959108.1;locus_tag=DOLE_RS16360;product=PTS sugar transporter subunit IIA;protein_id=WP_012176593.1;transl_table=11 NC_009943.1 RefSeq gene 3807992 3810001 . - . ID=gene-DOLE_RS16365;Name=DOLE_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16365;old_locus_tag=Dole_3181 NC_009943.1 Protein Homology CDS 3807992 3810001 . - 0 ID=cds-WP_012176594.1;Parent=gene-DOLE_RS16365;Dbxref=Genbank:WP_012176594.1;Name=WP_012176594.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012861.2;locus_tag=DOLE_RS16365;product=chloride channel protein;protein_id=WP_012176594.1;transl_table=11 NC_009943.1 RefSeq gene 3810565 3811449 . - . ID=gene-DOLE_RS16370;Name=DOLE_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16370;old_locus_tag=Dole_3182 NC_009943.1 Protein Homology CDS 3810565 3811449 . - 0 ID=cds-WP_012176595.1;Parent=gene-DOLE_RS16370;Dbxref=Genbank:WP_012176595.1;Name=WP_012176595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609827.1;locus_tag=DOLE_RS16370;product=dihydropteroate synthase;protein_id=WP_012176595.1;transl_table=11 NC_009943.1 RefSeq gene 3811515 3812855 . - . ID=gene-DOLE_RS16375;Name=acsC;gbkey=Gene;gene=acsC;gene_biotype=protein_coding;locus_tag=DOLE_RS16375;old_locus_tag=Dole_3183 NC_009943.1 Protein Homology CDS 3811515 3812855 . - 0 ID=cds-WP_012176596.1;Parent=gene-DOLE_RS16375;Dbxref=Genbank:WP_012176596.1;Name=WP_012176596.1;gbkey=CDS;gene=acsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965927.1;locus_tag=DOLE_RS16375;product=acetyl-CoA decarbonylase/synthase complex subunit gamma;protein_id=WP_012176596.1;transl_table=11 NC_009943.1 RefSeq gene 3812941 3815151 . - . ID=gene-DOLE_RS16380;Name=acsB;gbkey=Gene;gene=acsB;gene_biotype=protein_coding;locus_tag=DOLE_RS16380;old_locus_tag=Dole_3184 NC_009943.1 Protein Homology CDS 3812941 3815151 . - 0 ID=cds-WP_012176597.1;Parent=gene-DOLE_RS16380;Dbxref=Genbank:WP_012176597.1;Name=WP_012176597.1;gbkey=CDS;gene=acsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163059.1;locus_tag=DOLE_RS16380;product=acetyl-CoA decarbonylase/synthase complex subunit alpha/beta;protein_id=WP_012176597.1;transl_table=11 NC_009943.1 RefSeq gene 3815197 3817236 . - . ID=gene-DOLE_RS16385;Name=cooS;gbkey=Gene;gene=cooS;gene_biotype=protein_coding;locus_tag=DOLE_RS16385;old_locus_tag=Dole_3185 NC_009943.1 Protein Homology CDS 3815197 3817236 . - 0 ID=cds-WP_012176598.1;Parent=gene-DOLE_RS16385;Dbxref=Genbank:WP_012176598.1;Name=WP_012176598.1;Ontology_term=GO:0018492;gbkey=CDS;gene=cooS;go_function=carbon-monoxide dehydrogenase (acceptor) activity|0018492||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956692.1;locus_tag=DOLE_RS16385;product=anaerobic carbon-monoxide dehydrogenase catalytic subunit;protein_id=WP_012176598.1;transl_table=11 NC_009943.1 RefSeq gene 3817320 3818876 . - . ID=gene-DOLE_RS16390;Name=DOLE_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16390;old_locus_tag=Dole_3186 NC_009943.1 Protein Homology CDS 3817320 3818876 . - 0 ID=cds-WP_012176599.1;Parent=gene-DOLE_RS16390;Dbxref=Genbank:WP_012176599.1;Name=WP_012176599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014956693.1;locus_tag=DOLE_RS16390;product=acetyl-CoA decarbonylase/synthase complex subunit delta;protein_id=WP_012176599.1;transl_table=11 NC_009943.1 RefSeq gene 3819308 3820111 . - . ID=gene-DOLE_RS16395;Name=DOLE_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16395;old_locus_tag=Dole_3187 NC_009943.1 Protein Homology CDS 3819308 3820111 . - 0 ID=cds-WP_012176600.1;Parent=gene-DOLE_RS16395;Dbxref=Genbank:WP_012176600.1;Name=WP_012176600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012175368.1;locus_tag=DOLE_RS16395;product=2-amino-3%2C7-dideoxy-D-threo-hept-6-ulosonate synthase;protein_id=WP_012176600.1;transl_table=11 NC_009943.1 RefSeq gene 3820509 3821498 . - . ID=gene-DOLE_RS16400;Name=DOLE_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16400;old_locus_tag=Dole_3188 NC_009943.1 Protein Homology CDS 3820509 3821498 . - 0 ID=cds-WP_012176601.1;Parent=gene-DOLE_RS16400;Dbxref=Genbank:WP_012176601.1;Name=WP_012176601.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014957934.1;locus_tag=DOLE_RS16400;product=radical SAM protein;protein_id=WP_012176601.1;transl_table=11 NC_009943.1 RefSeq gene 3821679 3822242 . - . ID=gene-DOLE_RS16405;Name=DOLE_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16405;old_locus_tag=Dole_3189 NC_009943.1 Protein Homology CDS 3821679 3822242 . - 0 ID=cds-WP_012176602.1;Parent=gene-DOLE_RS16405;Dbxref=Genbank:WP_012176602.1;Name=WP_012176602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=DOLE_RS16405;product=methyltransferase domain-containing protein;protein_id=WP_012176602.1;transl_table=11 NC_009943.1 RefSeq gene 3822406 3823011 . - . ID=gene-DOLE_RS16410;Name=DOLE_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16410;old_locus_tag=Dole_3190 NC_009943.1 Protein Homology CDS 3822406 3823011 . - 0 ID=cds-WP_012176603.1;Parent=gene-DOLE_RS16410;Dbxref=Genbank:WP_012176603.1;Name=WP_012176603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965798.1;locus_tag=DOLE_RS16410;product=alpha/beta fold hydrolase;protein_id=WP_012176603.1;transl_table=11 NC_009943.1 RefSeq gene 3823134 3824282 . - . ID=gene-DOLE_RS16415;Name=DOLE_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16415;old_locus_tag=Dole_3191 NC_009943.1 Protein Homology CDS 3823134 3824282 . - 0 ID=cds-WP_012176604.1;Parent=gene-DOLE_RS16415;Dbxref=Genbank:WP_012176604.1;Name=WP_012176604.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: protein motif:HMM:NF013755.2;locus_tag=DOLE_RS16415;product=ribonuclease D;protein_id=WP_012176604.1;transl_table=11 NC_009943.1 RefSeq gene 3824315 3824833 . - . ID=gene-DOLE_RS16420;Name=DOLE_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16420;old_locus_tag=Dole_3192 NC_009943.1 GeneMarkS-2+ CDS 3824315 3824833 . - 0 ID=cds-WP_012176605.1;Parent=gene-DOLE_RS16420;Dbxref=Genbank:WP_012176605.1;Name=WP_012176605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16420;product=hypothetical protein;protein_id=WP_012176605.1;transl_table=11 NC_009943.1 RefSeq gene 3824851 3826239 . - . ID=gene-DOLE_RS17705;Name=DOLE_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17705;old_locus_tag=Dole_3193 NC_009943.1 Protein Homology CDS 3824851 3826239 . - 0 ID=cds-WP_012176606.1;Parent=gene-DOLE_RS17705;Dbxref=Genbank:WP_012176606.1;Name=WP_012176606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013180.2;locus_tag=DOLE_RS17705;product=diguanylate cyclase;protein_id=WP_012176606.1;transl_table=11 NC_009943.1 RefSeq gene 3826390 3828303 . + . ID=gene-DOLE_RS16430;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=DOLE_RS16430;old_locus_tag=Dole_3194 NC_009943.1 Protein Homology CDS 3826390 3828303 . + 0 ID=cds-WP_012176607.1;Parent=gene-DOLE_RS16430;Dbxref=Genbank:WP_012176607.1;Name=WP_012176607.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176607.1;locus_tag=DOLE_RS16430;product=threonine--tRNA ligase;protein_id=WP_012176607.1;transl_table=11 NC_009943.1 RefSeq gene 3828345 3828890 . + . ID=gene-DOLE_RS16435;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=DOLE_RS16435;old_locus_tag=Dole_3195 NC_009943.1 Protein Homology CDS 3828345 3828890 . + 0 ID=cds-WP_012176608.1;Parent=gene-DOLE_RS16435;Dbxref=Genbank:WP_012176608.1;Name=WP_012176608.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176608.1;locus_tag=DOLE_RS16435;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_012176608.1;transl_table=11 NC_009943.1 RefSeq gene 3829061 3829564 . + . ID=gene-DOLE_RS16440;Name=DOLE_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16440;old_locus_tag=Dole_3196 NC_009943.1 Protein Homology CDS 3829061 3829564 . + 0 ID=cds-WP_012176609.1;Parent=gene-DOLE_RS16440;Dbxref=Genbank:WP_012176609.1;Name=WP_012176609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071785.1;locus_tag=DOLE_RS16440;product=molybdenum cofactor biosynthesis protein MoaB;protein_id=WP_012176609.1;transl_table=11 NC_009943.1 RefSeq gene 3829885 3830283 . + . ID=gene-DOLE_RS16445;Name=DOLE_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16445;old_locus_tag=Dole_3197 NC_009943.1 GeneMarkS-2+ CDS 3829885 3830283 . + 0 ID=cds-WP_012176610.1;Parent=gene-DOLE_RS16445;Dbxref=Genbank:WP_012176610.1;Name=WP_012176610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16445;product=hypothetical protein;protein_id=WP_012176610.1;transl_table=11 NC_009943.1 RefSeq gene 3830450 3832027 . + . ID=gene-DOLE_RS16450;Name=DOLE_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16450;old_locus_tag=Dole_3198 NC_009943.1 Protein Homology CDS 3830450 3832027 . + 0 ID=cds-WP_012176611.1;Parent=gene-DOLE_RS16450;Dbxref=Genbank:WP_012176611.1;Name=WP_012176611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949720.1;locus_tag=DOLE_RS16450;product=class I adenylate-forming enzyme family protein;protein_id=WP_012176611.1;transl_table=11 NC_009943.1 RefSeq gene 3832362 3832760 . - . ID=gene-DOLE_RS16460;Name=DOLE_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16460;old_locus_tag=Dole_3200 NC_009943.1 Protein Homology CDS 3832362 3832760 . - 0 ID=cds-WP_012176613.1;Parent=gene-DOLE_RS16460;Dbxref=Genbank:WP_012176613.1;Name=WP_012176613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949556.1;locus_tag=DOLE_RS16460;product=hypothetical protein;protein_id=WP_012176613.1;transl_table=11 NC_009943.1 RefSeq gene 3832753 3836325 . - . ID=gene-DOLE_RS16465;Name=DOLE_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16465;old_locus_tag=Dole_3201 NC_009943.1 Protein Homology CDS 3832753 3836325 . - 0 ID=cds-WP_012176614.1;Parent=gene-DOLE_RS16465;Dbxref=Genbank:WP_012176614.1;Name=WP_012176614.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876033.1;locus_tag=DOLE_RS16465;product=SIS domain-containing protein;protein_id=WP_012176614.1;transl_table=11 NC_009943.1 RefSeq gene 3836350 3837411 . - . ID=gene-DOLE_RS16470;Name=DOLE_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16470;old_locus_tag=Dole_3202 NC_009943.1 Protein Homology CDS 3836350 3837411 . - 0 ID=cds-WP_012176615.1;Parent=gene-DOLE_RS16470;Dbxref=Genbank:WP_012176615.1;Name=WP_012176615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072887.1;locus_tag=DOLE_RS16470;product=iron-containing alcohol dehydrogenase family protein;protein_id=WP_012176615.1;transl_table=11 NC_009943.1 RefSeq gene 3837422 3838609 . - . ID=gene-DOLE_RS16475;Name=DOLE_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16475;old_locus_tag=Dole_3203 NC_009943.1 Protein Homology CDS 3837422 3838609 . - 0 ID=cds-WP_012176616.1;Parent=gene-DOLE_RS16475;Dbxref=Genbank:WP_012176616.1;Name=WP_012176616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012610026.1;locus_tag=DOLE_RS16475;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_012176616.1;transl_table=11 NC_009943.1 RefSeq gene 3838810 3840732 . - . ID=gene-DOLE_RS16480;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=DOLE_RS16480;old_locus_tag=Dole_3204 NC_009943.1 Protein Homology CDS 3838810 3840732 . - 0 ID=cds-WP_012176617.1;Parent=gene-DOLE_RS16480;Dbxref=Genbank:WP_012176617.1;Name=WP_012176617.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609176.1;locus_tag=DOLE_RS16480;product=methionine--tRNA ligase;protein_id=WP_012176617.1;transl_table=11 NC_009943.1 RefSeq gene 3840751 3841605 . - . ID=gene-DOLE_RS16485;Name=ricT;gbkey=Gene;gene=ricT;gene_biotype=protein_coding;locus_tag=DOLE_RS16485;old_locus_tag=Dole_3205 NC_009943.1 Protein Homology CDS 3840751 3841605 . - 0 ID=cds-WP_012176618.1;Parent=gene-DOLE_RS16485;Dbxref=Genbank:WP_012176618.1;Name=WP_012176618.1;gbkey=CDS;gene=ricT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964649.1;locus_tag=DOLE_RS16485;product=regulatory iron-sulfur-containing complex subunit RicT;protein_id=WP_012176618.1;transl_table=11 NC_009943.1 RefSeq gene 3841602 3842621 . - . ID=gene-DOLE_RS16490;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=DOLE_RS16490;old_locus_tag=Dole_3206 NC_009943.1 Protein Homology CDS 3841602 3842621 . - 0 ID=cds-WP_153304471.1;Parent=gene-DOLE_RS16490;Dbxref=Genbank:WP_153304471.1;Name=WP_153304471.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holB;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR00678.1;locus_tag=DOLE_RS16490;product=DNA polymerase III subunit delta';protein_id=WP_153304471.1;transl_table=11 NC_009943.1 RefSeq gene 3842626 3842901 . - . ID=gene-DOLE_RS16495;Name=DOLE_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16495;old_locus_tag=Dole_3207 NC_009943.1 Protein Homology CDS 3842626 3842901 . - 0 ID=cds-WP_012176620.1;Parent=gene-DOLE_RS16495;Dbxref=Genbank:WP_012176620.1;Name=WP_012176620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589776.1;locus_tag=DOLE_RS16495;product=integration host factor subunit beta;protein_id=WP_012176620.1;transl_table=11 NC_009943.1 RefSeq gene 3843057 3845354 . - . ID=gene-DOLE_RS16500;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=DOLE_RS16500;old_locus_tag=Dole_3208 NC_009943.1 Protein Homology CDS 3843057 3845354 . - 0 ID=cds-WP_041280664.1;Parent=gene-DOLE_RS16500;Dbxref=Genbank:WP_041280664.1;Name=WP_041280664.1;Ontology_term=GO:0010033,GO:0061024,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,membrane organization|0061024||IEA;inference=COORDINATES: protein motif:HMM:NF016348.2;locus_tag=DOLE_RS16500;product=LPS assembly protein LptD;protein_id=WP_041280664.1;transl_table=11 NC_009943.1 RefSeq gene 3845386 3845568 . - . ID=gene-DOLE_RS16505;Name=DOLE_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16505 NC_009943.1 Protein Homology CDS 3845386 3845568 . - 0 ID=cds-WP_041280665.1;Parent=gene-DOLE_RS16505;Dbxref=Genbank:WP_041280665.1;Name=WP_041280665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585569.1;locus_tag=DOLE_RS16505;product=hypothetical protein;protein_id=WP_041280665.1;transl_table=11 NC_009943.1 RefSeq gene 3845848 3847218 . + . ID=gene-DOLE_RS16510;Name=DOLE_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16510;old_locus_tag=Dole_3209 NC_009943.1 Protein Homology CDS 3845848 3847218 . + 0 ID=cds-WP_012176622.1;Parent=gene-DOLE_RS16510;Dbxref=Genbank:WP_012176622.1;Name=WP_012176622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014680.2;locus_tag=DOLE_RS16510;product=DNA recombination protein RmuC;protein_id=WP_012176622.1;transl_table=11 NC_009943.1 RefSeq gene 3847862 3848731 . + . ID=gene-DOLE_RS16515;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=DOLE_RS16515;old_locus_tag=Dole_3210 NC_009943.1 Protein Homology CDS 3847862 3848731 . + 0 ID=cds-WP_269719168.1;Parent=gene-DOLE_RS16515;Dbxref=Genbank:WP_269719168.1;Name=WP_269719168.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014959103.1;locus_tag=DOLE_RS16515;product=putative 4-hydroxybenzoate polyprenyltransferase;protein_id=WP_269719168.1;transl_table=11 NC_009943.1 RefSeq gene 3848722 3849327 . + . ID=gene-DOLE_RS16520;Name=DOLE_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16520;old_locus_tag=Dole_3211 NC_009943.1 Protein Homology CDS 3848722 3849327 . + 0 ID=cds-WP_041280666.1;Parent=gene-DOLE_RS16520;Dbxref=Genbank:WP_041280666.1;Name=WP_041280666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875296.1;locus_tag=DOLE_RS16520;product=UbiX family flavin prenyltransferase;protein_id=WP_041280666.1;transl_table=11 NC_009943.1 RefSeq gene 3849320 3851104 . + . ID=gene-DOLE_RS16525;Name=DOLE_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16525;old_locus_tag=Dole_3212 NC_009943.1 Protein Homology CDS 3849320 3851104 . + 0 ID=cds-WP_012176625.1;Parent=gene-DOLE_RS16525;Dbxref=Genbank:WP_012176625.1;Name=WP_012176625.1;Ontology_term=GO:0009234,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875295.1;locus_tag=DOLE_RS16525;product=menaquinone biosynthesis decarboxylase;protein_id=WP_012176625.1;transl_table=11 NC_009943.1 RefSeq gene 3851179 3851667 . + . ID=gene-DOLE_RS16530;Name=DOLE_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16530;old_locus_tag=Dole_3213 NC_009943.1 Protein Homology CDS 3851179 3851667 . + 0 ID=cds-WP_012176626.1;Parent=gene-DOLE_RS16530;Dbxref=Genbank:WP_012176626.1;Name=WP_012176626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018894.2;locus_tag=DOLE_RS16530;product=PilZ domain-containing protein;protein_id=WP_012176626.1;transl_table=11 NC_009943.1 RefSeq gene 3851895 3852545 . - . ID=gene-DOLE_RS16535;Name=DOLE_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16535;old_locus_tag=Dole_3214 NC_009943.1 Protein Homology CDS 3851895 3852545 . - 0 ID=cds-WP_012176627.1;Parent=gene-DOLE_RS16535;Dbxref=Genbank:WP_012176627.1;Name=WP_012176627.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016895.2;locus_tag=DOLE_RS16535;product=SPOR domain-containing protein;protein_id=WP_012176627.1;transl_table=11 NC_009943.1 RefSeq gene 3852698 3854368 . - . ID=gene-DOLE_RS16540;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=DOLE_RS16540;old_locus_tag=Dole_3215 NC_009943.1 Protein Homology CDS 3852698 3854368 . - 0 ID=cds-WP_012176628.1;Parent=gene-DOLE_RS16540;Dbxref=Genbank:WP_012176628.1;Name=WP_012176628.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176628.1;locus_tag=DOLE_RS16540;product=arginine--tRNA ligase;protein_id=WP_012176628.1;transl_table=11 NC_009943.1 RefSeq gene 3854398 3854820 . - . ID=gene-DOLE_RS18350;Name=DOLE_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18350;old_locus_tag=Dole_3216 NC_009943.1 GeneMarkS-2+ CDS 3854398 3854820 . - 0 ID=cds-WP_012176629.1;Parent=gene-DOLE_RS18350;Dbxref=Genbank:WP_012176629.1;Name=WP_012176629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18350;product=hypothetical protein;protein_id=WP_012176629.1;transl_table=11 NC_009943.1 RefSeq gene 3854946 3856394 . - . ID=gene-DOLE_RS16550;Name=DOLE_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16550;old_locus_tag=Dole_3217 NC_009943.1 Protein Homology CDS 3854946 3856394 . - 0 ID=cds-WP_012176630.1;Parent=gene-DOLE_RS16550;Dbxref=Genbank:WP_012176630.1;Name=WP_012176630.1;Ontology_term=GO:0015379,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium:chloride symporter activity|0015379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072544.1;locus_tag=DOLE_RS16550;product=TrkH family potassium uptake protein;protein_id=WP_012176630.1;transl_table=11 NC_009943.1 RefSeq gene 3856395 3857759 . - . ID=gene-DOLE_RS16555;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=DOLE_RS16555;old_locus_tag=Dole_3218 NC_009943.1 Protein Homology CDS 3856395 3857759 . - 0 ID=cds-WP_012176631.1;Parent=gene-DOLE_RS16555;Dbxref=Genbank:WP_012176631.1;Name=WP_012176631.1;Ontology_term=GO:0006813,GO:0015079;gbkey=CDS;gene=trkA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004072546.1;locus_tag=DOLE_RS16555;product=Trk system potassium transporter TrkA;protein_id=WP_012176631.1;transl_table=11 NC_009943.1 RefSeq gene 3857930 3858652 . - . ID=gene-DOLE_RS16560;Name=DOLE_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16560;old_locus_tag=Dole_3219 NC_009943.1 Protein Homology CDS 3857930 3858652 . - 0 ID=cds-WP_041281318.1;Parent=gene-DOLE_RS16560;Dbxref=Genbank:WP_041281318.1;Name=WP_041281318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876666.1;locus_tag=DOLE_RS16560;product=acyltransferase;protein_id=WP_041281318.1;transl_table=11 NC_009943.1 RefSeq gene 3858729 3859778 . - . ID=gene-DOLE_RS16565;Name=DOLE_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16565;old_locus_tag=Dole_3220 NC_009943.1 Protein Homology CDS 3858729 3859778 . - 0 ID=cds-WP_012176633.1;Parent=gene-DOLE_RS16565;Dbxref=Genbank:WP_012176633.1;Name=WP_012176633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004071451.1;locus_tag=DOLE_RS16565;product=hypothetical protein;protein_id=WP_012176633.1;transl_table=11 NC_009943.1 RefSeq gene 3859848 3860933 . - . ID=gene-DOLE_RS16570;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=DOLE_RS16570;old_locus_tag=Dole_3221 NC_009943.1 Protein Homology CDS 3859848 3860933 . - 0 ID=cds-WP_012176634.1;Parent=gene-DOLE_RS16570;Dbxref=Genbank:WP_012176634.1;Name=WP_012176634.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176634.1;locus_tag=DOLE_RS16570;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_012176634.1;transl_table=11 NC_009943.1 RefSeq gene 3861059 3862363 . + . ID=gene-DOLE_RS16575;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=DOLE_RS16575;old_locus_tag=Dole_3222 NC_009943.1 Protein Homology CDS 3861059 3862363 . + 0 ID=cds-WP_012176635.1;Parent=gene-DOLE_RS16575;Dbxref=Genbank:WP_012176635.1;Name=WP_012176635.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012609970.1;locus_tag=DOLE_RS16575;product=histidinol dehydrogenase;protein_id=WP_012176635.1;transl_table=11 NC_009943.1 RefSeq gene 3862378 3864162 . - . ID=gene-DOLE_RS16580;Name=DOLE_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16580;old_locus_tag=Dole_3223 NC_009943.1 Protein Homology CDS 3862378 3864162 . - 0 ID=cds-WP_012176636.1;Parent=gene-DOLE_RS16580;Dbxref=Genbank:WP_012176636.1;Name=WP_012176636.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=DOLE_RS16580;product=ATP-binding protein;protein_id=WP_012176636.1;transl_table=11 NC_009943.1 RefSeq gene 3864306 3864974 . - . ID=gene-DOLE_RS16585;Name=DOLE_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16585;old_locus_tag=Dole_3224 NC_009943.1 Protein Homology CDS 3864306 3864974 . - 0 ID=cds-WP_012176637.1;Parent=gene-DOLE_RS16585;Dbxref=Genbank:WP_012176637.1;Name=WP_012176637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875832.1;locus_tag=DOLE_RS16585;product=TIGR00153 family protein;protein_id=WP_012176637.1;transl_table=11 NC_009943.1 RefSeq gene 3864984 3866219 . - . ID=gene-DOLE_RS16590;Name=DOLE_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16590;old_locus_tag=Dole_3225 NC_009943.1 Protein Homology CDS 3864984 3866219 . - 0 ID=cds-WP_012176638.1;Parent=gene-DOLE_RS16590;Dbxref=Genbank:WP_012176638.1;Name=WP_012176638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875833.1;locus_tag=DOLE_RS16590;product=inorganic phosphate transporter;protein_id=WP_012176638.1;transl_table=11 NC_009943.1 RefSeq gene 3866919 3866995 . - . ID=gene-DOLE_RS16595;Name=DOLE_RS16595;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS16595;old_locus_tag=Dole_R0051 NC_009943.1 tRNAscan-SE tRNA 3866919 3866995 . - . ID=rna-DOLE_RS16595;Parent=gene-DOLE_RS16595;anticodon=(pos:complement(3866959..3866961));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16595;product=tRNA-Pro NC_009943.1 tRNAscan-SE exon 3866919 3866995 . - . ID=exon-DOLE_RS16595-1;Parent=rna-DOLE_RS16595;anticodon=(pos:complement(3866959..3866961));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16595;product=tRNA-Pro NC_009943.1 RefSeq gene 3867249 3868988 . + . ID=gene-DOLE_RS16600;Name=DOLE_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16600;old_locus_tag=Dole_3226 NC_009943.1 Protein Homology CDS 3867249 3868988 . + 0 ID=cds-WP_012176639.1;Parent=gene-DOLE_RS16600;Dbxref=Genbank:WP_012176639.1;Name=WP_012176639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020875786.1;locus_tag=DOLE_RS16600;product=ABC transporter ATP-binding protein;protein_id=WP_012176639.1;transl_table=11 NC_009943.1 RefSeq gene 3868985 3871012 . + . ID=gene-DOLE_RS16605;Name=DOLE_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16605;old_locus_tag=Dole_3227 NC_009943.1 Protein Homology CDS 3868985 3871012 . + 0 ID=cds-WP_012176640.1;Parent=gene-DOLE_RS16605;Dbxref=Genbank:WP_012176640.1;Name=WP_012176640.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012869.2;locus_tag=DOLE_RS16605;product=ABC transporter ATP-binding protein;protein_id=WP_012176640.1;transl_table=11 NC_009943.1 RefSeq gene 3871361 3872182 . - . ID=gene-DOLE_RS16610;Name=DOLE_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16610;old_locus_tag=Dole_3228 NC_009943.1 Protein Homology CDS 3871361 3872182 . - 0 ID=cds-WP_012176641.1;Parent=gene-DOLE_RS16610;Dbxref=Genbank:WP_012176641.1;Name=WP_012176641.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF001753.0;locus_tag=DOLE_RS16610;product=NAD-dependent deacylase;protein_id=WP_012176641.1;transl_table=11 NC_009943.1 RefSeq gene 3872216 3873397 . - . ID=gene-DOLE_RS16615;Name=DOLE_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16615;old_locus_tag=Dole_3229 NC_009943.1 GeneMarkS-2+ CDS 3872216 3873397 . - 0 ID=cds-WP_012176642.1;Parent=gene-DOLE_RS16615;Dbxref=Genbank:WP_012176642.1;Name=WP_012176642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16615;product=hypothetical protein;protein_id=WP_012176642.1;transl_table=11 NC_009943.1 RefSeq gene 3873457 3874440 . - . ID=gene-DOLE_RS16620;Name=DOLE_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16620;old_locus_tag=Dole_3230 NC_009943.1 Protein Homology CDS 3873457 3874440 . - 0 ID=cds-WP_012176643.1;Parent=gene-DOLE_RS16620;Dbxref=Genbank:WP_012176643.1;Name=WP_012176643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876291.1;locus_tag=DOLE_RS16620;product=polyprenyl synthetase family protein;protein_id=WP_012176643.1;transl_table=11 NC_009943.1 RefSeq gene 3874437 3875759 . - . ID=gene-DOLE_RS16625;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=DOLE_RS16625;old_locus_tag=Dole_3231 NC_009943.1 Protein Homology CDS 3874437 3875759 . - 0 ID=cds-WP_012176644.1;Parent=gene-DOLE_RS16625;Dbxref=Genbank:WP_012176644.1;Name=WP_012176644.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012176644.1;locus_tag=DOLE_RS16625;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_012176644.1;transl_table=11 NC_009943.1 RefSeq gene 3875761 3876585 . - . ID=gene-DOLE_RS16630;Name=DOLE_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16630;old_locus_tag=Dole_3232 NC_009943.1 Protein Homology CDS 3875761 3876585 . - 0 ID=cds-WP_012176645.1;Parent=gene-DOLE_RS16630;Dbxref=Genbank:WP_012176645.1;Name=WP_012176645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006964948.1;locus_tag=DOLE_RS16630;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_012176645.1;transl_table=11 NC_009943.1 RefSeq gene 3876779 3877810 . - . ID=gene-DOLE_RS16635;Name=DOLE_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16635;old_locus_tag=Dole_3233 NC_009943.1 Protein Homology CDS 3876779 3877810 . - 0 ID=cds-WP_041280667.1;Parent=gene-DOLE_RS16635;Dbxref=Genbank:WP_041280667.1;Name=WP_041280667.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014477.2;locus_tag=DOLE_RS16635;product=FAD:protein FMN transferase;protein_id=WP_041280667.1;transl_table=11 NC_009943.1 RefSeq gene 3878000 3878944 . + . ID=gene-DOLE_RS16640;Name=DOLE_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16640;old_locus_tag=Dole_3234 NC_009943.1 Protein Homology CDS 3878000 3878944 . + 0 ID=cds-WP_012176647.1;Parent=gene-DOLE_RS16640;Dbxref=Genbank:WP_012176647.1;Name=WP_012176647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015949013.1;locus_tag=DOLE_RS16640;product=carbon-nitrogen hydrolase family protein;protein_id=WP_012176647.1;transl_table=11 NC_009943.1 RefSeq gene 3878941 3879732 . + . ID=gene-DOLE_RS16645;Name=DOLE_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16645;old_locus_tag=Dole_3235 NC_009943.1 Protein Homology CDS 3878941 3879732 . + 0 ID=cds-WP_012176648.1;Parent=gene-DOLE_RS16645;Dbxref=Genbank:WP_012176648.1;Name=WP_012176648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948180.1;locus_tag=DOLE_RS16645;product=ribonuclease Z;protein_id=WP_012176648.1;transl_table=11 NC_009943.1 RefSeq gene 3879729 3880391 . + . ID=gene-DOLE_RS16650;Name=DOLE_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16650;old_locus_tag=Dole_3236 NC_009943.1 Protein Homology CDS 3879729 3880391 . + 0 ID=cds-WP_012176649.1;Parent=gene-DOLE_RS16650;Dbxref=Genbank:WP_012176649.1;Name=WP_012176649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015948181.1;locus_tag=DOLE_RS16650;product=bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase;protein_id=WP_012176649.1;transl_table=11 NC_009943.1 RefSeq gene 3880500 3881339 . + . ID=gene-DOLE_RS16655;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=DOLE_RS16655;old_locus_tag=Dole_3237 NC_009943.1 Protein Homology CDS 3880500 3881339 . + 0 ID=cds-WP_012176650.1;Parent=gene-DOLE_RS16655;Dbxref=Genbank:WP_012176650.1;Name=WP_012176650.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020876104.1;locus_tag=DOLE_RS16655;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_012176650.1;transl_table=11 NC_009943.1 RefSeq gene 3881336 3882652 . + . ID=gene-DOLE_RS16660;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=DOLE_RS16660;old_locus_tag=Dole_3238 NC_009943.1 Protein Homology CDS 3881336 3882652 . + 0 ID=cds-WP_012176651.1;Parent=gene-DOLE_RS16660;Dbxref=Genbank:WP_012176651.1;Name=WP_012176651.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963812.1;locus_tag=DOLE_RS16660;product=glutamyl-tRNA reductase;protein_id=WP_012176651.1;transl_table=11 NC_009943.1 RefSeq gene 3883103 3884548 . - . ID=gene-DOLE_RS16665;Name=DOLE_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16665;old_locus_tag=Dole_3239 NC_009943.1 Protein Homology CDS 3883103 3884548 . - 0 ID=cds-WP_012176652.1;Parent=gene-DOLE_RS16665;Dbxref=Genbank:WP_012176652.1;Name=WP_012176652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968599.1;locus_tag=DOLE_RS16665;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012176652.1;transl_table=11 NC_009943.1 RefSeq gene 3884978 3885403 . + . ID=gene-DOLE_RS16670;Name=DOLE_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16670;old_locus_tag=Dole_3240 NC_009943.1 Protein Homology CDS 3884978 3885403 . + 0 ID=cds-WP_052294352.1;Parent=gene-DOLE_RS16670;Dbxref=Genbank:WP_052294352.1;Name=WP_052294352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589878.1;locus_tag=DOLE_RS16670;product=S-adenosylmethionine decarboxylase;protein_id=WP_052294352.1;transl_table=11 NC_009943.1 RefSeq gene 3885660 3886595 . + . ID=gene-DOLE_RS16675;Name=DOLE_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16675;old_locus_tag=Dole_3241 NC_009943.1 Protein Homology CDS 3885660 3886595 . + 0 ID=cds-WP_012176654.1;Parent=gene-DOLE_RS16675;Dbxref=Genbank:WP_012176654.1;Name=WP_012176654.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024871.2;locus_tag=DOLE_RS16675;product=GNAT family N-acetyltransferase;protein_id=WP_012176654.1;transl_table=11 NC_009943.1 RefSeq gene 3886846 3888144 . + . ID=gene-DOLE_RS16680;Name=DOLE_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16680;old_locus_tag=Dole_3242 NC_009943.1 Protein Homology CDS 3886846 3888144 . + 0 ID=cds-WP_012176655.1;Parent=gene-DOLE_RS16680;Dbxref=Genbank:WP_012176655.1;Name=WP_012176655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014686.2;locus_tag=DOLE_RS16680;product=ATP-grasp domain-containing protein;protein_id=WP_012176655.1;transl_table=11 NC_009943.1 RefSeq gene 3888141 3889403 . + . ID=gene-DOLE_RS16685;Name=DOLE_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16685;old_locus_tag=Dole_3243 NC_009943.1 Protein Homology CDS 3888141 3889403 . + 0 ID=cds-WP_012176656.1;Parent=gene-DOLE_RS16685;Dbxref=Genbank:WP_012176656.1;Name=WP_012176656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020589875.1;locus_tag=DOLE_RS16685;product=decarboxylase;protein_id=WP_012176656.1;transl_table=11 NC_009943.1 RefSeq gene 3889933 3890145 . + . ID=gene-DOLE_RS16695;Name=DOLE_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16695;old_locus_tag=Dole_3244 NC_009943.1 Protein Homology CDS 3889933 3890145 . + 0 ID=cds-WP_012176657.1;Parent=gene-DOLE_RS16695;Dbxref=Genbank:WP_012176657.1;Name=WP_012176657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878394.1;locus_tag=DOLE_RS16695;product=hypothetical protein;protein_id=WP_012176657.1;transl_table=11 NC_009943.1 RefSeq gene 3890168 3891259 . + . ID=gene-DOLE_RS16700;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=DOLE_RS16700;old_locus_tag=Dole_3245 NC_009943.1 Protein Homology CDS 3890168 3891259 . + 0 ID=cds-WP_012176658.1;Parent=gene-DOLE_RS16700;Dbxref=Genbank:WP_012176658.1;Name=WP_012176658.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723192.1;locus_tag=DOLE_RS16700;product=YedE family putative selenium transporter;protein_id=WP_012176658.1;transl_table=11 NC_009943.1 RefSeq gene 3891273 3891494 . + . ID=gene-DOLE_RS16705;Name=DOLE_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16705;old_locus_tag=Dole_3246 NC_009943.1 Protein Homology CDS 3891273 3891494 . + 0 ID=cds-WP_012176659.1;Parent=gene-DOLE_RS16705;Dbxref=Genbank:WP_012176659.1;Name=WP_012176659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020878392.1;locus_tag=DOLE_RS16705;product=sulfurtransferase TusA family protein;protein_id=WP_012176659.1;transl_table=11 NC_009943.1 RefSeq gene 3891573 3892091 . + . ID=gene-DOLE_RS16710;Name=DOLE_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16710;old_locus_tag=Dole_3247 NC_009943.1 Protein Homology CDS 3891573 3892091 . + 0 ID=cds-WP_041281327.1;Parent=gene-DOLE_RS16710;Dbxref=Genbank:WP_041281327.1;Name=WP_041281327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015723190.1;locus_tag=DOLE_RS16710;product=DUF3343 domain-containing protein;protein_id=WP_041281327.1;transl_table=11 NC_009943.1 RefSeq gene 3892085 3892939 . + . ID=gene-DOLE_RS16715;Name=DOLE_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16715;old_locus_tag=Dole_3248 NC_009943.1 Protein Homology CDS 3892085 3892939 . + 0 ID=cds-WP_012176661.1;Parent=gene-DOLE_RS16715;Dbxref=Genbank:WP_012176661.1;Name=WP_012176661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015906251.1;locus_tag=DOLE_RS16715;product=sugar kinase;protein_id=WP_012176661.1;transl_table=11 NC_009943.1 RefSeq gene 3893386 3894435 . + . ID=gene-DOLE_RS16720;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=DOLE_RS16720;old_locus_tag=Dole_3249 NC_009943.1 Protein Homology CDS 3893386 3894435 . + 0 ID=cds-WP_083766642.1;Parent=gene-DOLE_RS16720;Dbxref=Genbank:WP_083766642.1;Name=WP_083766642.1;Ontology_term=GO:0001887,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenium compound metabolic process|0001887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015905308.1;locus_tag=DOLE_RS16720;product=selenide%2C water dikinase SelD;protein_id=WP_083766642.1;transl_except=(pos:3893437..3893439%2Caa:Sec);transl_table=11 NC_009943.1 RefSeq gene 3895478 3896830 . + . ID=gene-DOLE_RS16725;Name=DOLE_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16725;old_locus_tag=Dole_3250 NC_009943.1 Protein Homology CDS 3895478 3896830 . + 0 ID=cds-WP_012174089.1-6;Parent=gene-DOLE_RS16725;Dbxref=Genbank:WP_012174089.1;Name=WP_012174089.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012174089.1;locus_tag=DOLE_RS16725;product=ISNCY-like element ISDol1 family transposase;protein_id=WP_012174089.1;transl_table=11 NC_009943.1 RefSeq gene 3897194 3898234 . + . ID=gene-DOLE_RS16730;Name=DOLE_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16730;old_locus_tag=Dole_3251 NC_009943.1 Protein Homology CDS 3897194 3898234 . + 0 ID=cds-WP_012176663.1;Parent=gene-DOLE_RS16730;Dbxref=Genbank:WP_012176663.1;Name=WP_012176663.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01451.2;locus_tag=DOLE_RS16730;product=DUF11 domain-containing protein;protein_id=WP_012176663.1;transl_table=11 NC_009943.1 RefSeq gene 3898252 3898755 . + . ID=gene-DOLE_RS17715;Name=DOLE_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17715;old_locus_tag=Dole_3252 NC_009943.1 Protein Homology CDS 3898252 3898755 . + 0 ID=cds-WP_012176664.1;Parent=gene-DOLE_RS17715;Dbxref=Genbank:WP_012176664.1;Name=WP_012176664.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013508.2;locus_tag=DOLE_RS17715;product=DUF11 domain-containing protein;protein_id=WP_012176664.1;transl_table=11 NC_009943.1 RefSeq gene 3898834 3899964 . + . ID=gene-DOLE_RS16740;Name=DOLE_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16740;old_locus_tag=Dole_3253 NC_009943.1 Protein Homology CDS 3898834 3899964 . + 0 ID=cds-WP_012176665.1;Parent=gene-DOLE_RS16740;Dbxref=Genbank:WP_012176665.1;Name=WP_012176665.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013508.2;locus_tag=DOLE_RS16740;product=DUF11 domain-containing protein;protein_id=WP_012176665.1;transl_table=11 NC_009943.1 RefSeq gene 3899980 3906336 . + . ID=gene-DOLE_RS16745;Name=DOLE_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16745;old_locus_tag=Dole_3254 NC_009943.1 Protein Homology CDS 3899980 3906336 . + 0 ID=cds-WP_012176666.1;Parent=gene-DOLE_RS16745;Dbxref=Genbank:WP_012176666.1;Name=WP_012176666.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013508.2;locus_tag=DOLE_RS16745;product=OmpA family protein;protein_id=WP_012176666.1;transl_table=11 NC_009943.1 RefSeq gene 3906336 3908174 . + . ID=gene-DOLE_RS16750;Name=DOLE_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16750;old_locus_tag=Dole_3255 NC_009943.1 Protein Homology CDS 3906336 3908174 . + 0 ID=cds-WP_012176667.1;Parent=gene-DOLE_RS16750;Dbxref=Genbank:WP_012176667.1;Name=WP_012176667.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013508.2;locus_tag=DOLE_RS16750;product=DUF11 domain-containing protein;protein_id=WP_012176667.1;transl_table=11 NC_009943.1 RefSeq gene 3908207 3910615 . - . ID=gene-DOLE_RS17720;Name=DOLE_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17720;old_locus_tag=Dole_3256 NC_009943.1 Protein Homology CDS 3908207 3910615 . - 0 ID=cds-WP_012176668.1;Parent=gene-DOLE_RS17720;Dbxref=Genbank:WP_012176668.1;Name=WP_012176668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS17720;product=PAS domain S-box protein;protein_id=WP_012176668.1;transl_table=11 NC_009943.1 RefSeq gene 3910679 3911755 . - . ID=gene-DOLE_RS16760;Name=DOLE_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16760;old_locus_tag=Dole_3257 NC_009943.1 Protein Homology CDS 3910679 3911755 . - 0 ID=cds-WP_012176669.1;Parent=gene-DOLE_RS16760;Dbxref=Genbank:WP_012176669.1;Name=WP_012176669.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DOLE_RS16760;product=response regulator;protein_id=WP_012176669.1;transl_table=11 NC_009943.1 RefSeq gene 3911783 3912625 . - . ID=gene-DOLE_RS16765;Name=DOLE_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16765;old_locus_tag=Dole_3258 NC_009943.1 GeneMarkS-2+ CDS 3911783 3912625 . - 0 ID=cds-WP_012176670.1;Parent=gene-DOLE_RS16765;Dbxref=Genbank:WP_012176670.1;Name=WP_012176670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16765;product=hypothetical protein;protein_id=WP_012176670.1;transl_table=11 NC_009943.1 RefSeq gene 3912843 3914939 . - . ID=gene-DOLE_RS16770;Name=DOLE_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16770;old_locus_tag=Dole_3259 NC_009943.1 GeneMarkS-2+ CDS 3912843 3914939 . - 0 ID=cds-WP_012176671.1;Parent=gene-DOLE_RS16770;Dbxref=Genbank:WP_012176671.1;Name=WP_012176671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS16770;product=cohesin domain-containing protein;protein_id=WP_012176671.1;transl_table=11 NC_009943.1 RefSeq gene 3915364 3915855 . - . ID=gene-DOLE_RS16775;Name=DOLE_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16775;old_locus_tag=Dole_3260 NC_009943.1 Protein Homology CDS 3915364 3915855 . - 0 ID=cds-WP_012176672.1;Parent=gene-DOLE_RS16775;Dbxref=Genbank:WP_012176672.1;Name=WP_012176672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013156.2;locus_tag=DOLE_RS16775;product=cohesin domain-containing protein;protein_id=WP_012176672.1;transl_table=11 NC_009943.1 RefSeq gene 3915939 3917225 . - . ID=gene-DOLE_RS16780;Name=DOLE_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16780;old_locus_tag=Dole_3261 NC_009943.1 Protein Homology CDS 3915939 3917225 . - 0 ID=cds-WP_012176673.1;Parent=gene-DOLE_RS16780;Dbxref=Genbank:WP_012176673.1;Name=WP_012176673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013156.2;locus_tag=DOLE_RS16780;product=cohesin domain-containing protein;protein_id=WP_012176673.1;transl_table=11 NC_009943.1 RefSeq gene 3917723 3919117 . - . ID=gene-DOLE_RS16785;Name=DOLE_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16785;old_locus_tag=Dole_3262 NC_009943.1 Protein Homology CDS 3917723 3919117 . - 0 ID=cds-WP_041280669.1;Parent=gene-DOLE_RS16785;Dbxref=Genbank:WP_041280669.1;Name=WP_041280669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013163109.1;locus_tag=DOLE_RS16785;product=sigma-54 dependent transcriptional regulator;protein_id=WP_041280669.1;transl_table=11 NC_009943.1 RefSeq gene 3919134 3921053 . - . ID=gene-DOLE_RS17725;Name=DOLE_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17725;old_locus_tag=Dole_3263 NC_009943.1 Protein Homology CDS 3919134 3921053 . - 0 ID=cds-WP_012176675.1;Parent=gene-DOLE_RS17725;Dbxref=Genbank:WP_012176675.1;Name=WP_012176675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS17725;product=PAS domain-containing sensor histidine kinase;protein_id=WP_012176675.1;transl_table=11 NC_009943.1 RefSeq gene 3921262 3924666 . + . ID=gene-DOLE_RS17730;Name=DOLE_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17730;old_locus_tag=Dole_3264 NC_009943.1 Protein Homology CDS 3921262 3924666 . + 0 ID=cds-WP_012176676.1;Parent=gene-DOLE_RS17730;Dbxref=Genbank:WP_012176676.1;Name=WP_012176676.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=DOLE_RS17730;product=PAS domain S-box protein;protein_id=WP_012176676.1;transl_table=11 NC_009943.1 RefSeq gene 3924682 3928002 . + . ID=gene-DOLE_RS17735;Name=DOLE_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17735;old_locus_tag=Dole_3265 NC_009943.1 Protein Homology CDS 3924682 3928002 . + 0 ID=cds-WP_012176677.1;Parent=gene-DOLE_RS17735;Dbxref=Genbank:WP_012176677.1;Name=WP_012176677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006968418.1;locus_tag=DOLE_RS17735;product=PAS domain S-box protein;protein_id=WP_012176677.1;transl_table=11 NC_009943.1 RefSeq gene 3928184 3930676 . + . ID=gene-DOLE_RS17740;Name=DOLE_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17740;old_locus_tag=Dole_3266 NC_009943.1 Protein Homology CDS 3928184 3930676 . + 0 ID=cds-WP_012176678.1;Parent=gene-DOLE_RS17740;Dbxref=Genbank:WP_012176678.1;Name=WP_012176678.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=DOLE_RS17740;product=transporter substrate-binding domain-containing protein;protein_id=WP_012176678.1;transl_table=11 NC_009943.1 RefSeq gene 3930742 3934284 . + . ID=gene-DOLE_RS17745;Name=DOLE_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17745;old_locus_tag=Dole_3267 NC_009943.1 Protein Homology CDS 3930742 3934284 . + 0 ID=cds-WP_012176679.1;Parent=gene-DOLE_RS17745;Dbxref=Genbank:WP_012176679.1;Name=WP_012176679.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965544.1;locus_tag=DOLE_RS17745;product=response regulator;protein_id=WP_012176679.1;transl_table=11 NC_009943.1 RefSeq gene 3934266 3937505 . + . ID=gene-DOLE_RS18090;Name=DOLE_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18090;old_locus_tag=Dole_3268 NC_009943.1 Protein Homology CDS 3934266 3937505 . + 0 ID=cds-WP_012176680.1;Parent=gene-DOLE_RS18090;Dbxref=Genbank:WP_012176680.1;Name=WP_012176680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020585504.1;locus_tag=DOLE_RS18090;product=PAS domain S-box protein;protein_id=WP_012176680.1;transl_table=11 NC_009943.1 RefSeq gene 3937651 3937905 . + . ID=gene-DOLE_RS16820;Name=DOLE_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16820;old_locus_tag=Dole_3269 NC_009943.1 Protein Homology CDS 3937651 3937905 . + 0 ID=cds-WP_269719169.1;Parent=gene-DOLE_RS16820;Dbxref=Genbank:WP_269719169.1;Name=WP_269719169.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02436.1;locus_tag=DOLE_RS16820;product=four helix bundle protein;protein_id=WP_269719169.1;transl_table=11 NC_009943.1 RefSeq gene 3937925 3939622 . + . ID=gene-DOLE_RS16825;Name=DOLE_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16825;old_locus_tag=Dole_3270 NC_009943.1 Protein Homology CDS 3937925 3939622 . + 0 ID=cds-WP_012176682.1;Parent=gene-DOLE_RS16825;Dbxref=Genbank:WP_012176682.1;Name=WP_012176682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965021.1;locus_tag=DOLE_RS16825;product=ATP-binding protein;protein_id=WP_012176682.1;transl_table=11 NC_009943.1 RefSeq gene 3939670 3940032 . + . ID=gene-DOLE_RS16830;Name=DOLE_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS16830;old_locus_tag=Dole_3271 NC_009943.1 Protein Homology CDS 3939670 3940032 . + 0 ID=cds-WP_012176683.1;Parent=gene-DOLE_RS16830;Dbxref=Genbank:WP_012176683.1;Name=WP_012176683.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006965022.1;locus_tag=DOLE_RS16830;product=response regulator;protein_id=WP_012176683.1;transl_table=11 NC_009943.1 RefSeq gene 3940235 3943060 . + . ID=gene-DOLE_RS17750;Name=DOLE_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS17750;old_locus_tag=Dole_3272 NC_009943.1 Protein Homology CDS 3940235 3943060 . + 0 ID=cds-WP_167320893.1;Parent=gene-DOLE_RS17750;Dbxref=Genbank:WP_167320893.1;Name=WP_167320893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963858.1;locus_tag=DOLE_RS17750;product=PAS domain S-box protein;protein_id=WP_167320893.1;transl_table=11 NC_009943.1 RefSeq gene 3943216 3943293 . - . ID=gene-DOLE_RS16840;Name=DOLE_RS16840;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS16840;old_locus_tag=Dole_R0052 NC_009943.1 tRNAscan-SE tRNA 3943216 3943293 . - . ID=rna-DOLE_RS16840;Parent=gene-DOLE_RS16840;anticodon=(pos:complement(3943255..3943257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16840;product=tRNA-Glu NC_009943.1 tRNAscan-SE exon 3943216 3943293 . - . ID=exon-DOLE_RS16840-1;Parent=rna-DOLE_RS16840;anticodon=(pos:complement(3943255..3943257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16840;product=tRNA-Glu NC_009943.1 RefSeq gene 3943313 3943388 . - . ID=gene-DOLE_RS16845;Name=DOLE_RS16845;gbkey=Gene;gene_biotype=tRNA;locus_tag=DOLE_RS16845;old_locus_tag=Dole_R0053 NC_009943.1 tRNAscan-SE tRNA 3943313 3943388 . - . ID=rna-DOLE_RS16845;Parent=gene-DOLE_RS16845;anticodon=(pos:complement(3943353..3943355));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16845;product=tRNA-Lys NC_009943.1 tRNAscan-SE exon 3943313 3943388 . - . ID=exon-DOLE_RS16845-1;Parent=rna-DOLE_RS16845;anticodon=(pos:complement(3943353..3943355));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DOLE_RS16845;product=tRNA-Lys NC_009943.1 RefSeq gene 3943423 3943563 . + . ID=gene-DOLE_RS18355;Name=DOLE_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DOLE_RS18355 NC_009943.1 GeneMarkS-2+ CDS 3943423 3943563 . + 0 ID=cds-WP_153304473.1;Parent=gene-DOLE_RS18355;Dbxref=Genbank:WP_153304473.1;Name=WP_153304473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DOLE_RS18355;product=hypothetical protein;protein_id=WP_153304473.1;transl_table=11 ###