locus-tag class description DP_RS00015 PF00753 Metallo-beta-lactamase superfamily DP_RS00025 PF00977 Histidine biosynthesis protein DP_RS00035 PF03144 Elongation factor Tu domain 2 DP_RS00035 PF00009 Elongation factor Tu GTP binding domain DP_RS00035 PF03764 Elongation factor G, domain IV DP_RS00035 PF00679 Elongation factor G C-terminus DP_RS00035 PF14492 Elongation Factor G, domain II DP_RS00045 PF04480 Protein of unknown function (DUF559) DP_RS00055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DP_RS00055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DP_RS00055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DP_RS00070 PF01757 Acyltransferase family DP_RS00090 PF00483 Nucleotidyl transferase DP_RS00095 PF01370 NAD dependent epimerase/dehydratase family DP_RS00105 PF16363 GDP-mannose 4,6 dehydratase DP_RS00115 PF16363 GDP-mannose 4,6 dehydratase DP_RS00120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DP_RS00130 PF02397 Bacterial sugar transferase DP_RS00135 PF13477 Glycosyl transferase 4-like DP_RS00135 PF00534 Glycosyl transferases group 1 DP_RS00140 PF00534 Glycosyl transferases group 1 DP_RS00140 PF13439 Glycosyltransferase Family 4 DP_RS00145 PF00733 Asparagine synthase DP_RS00145 PF13537 Glutamine amidotransferase domain DP_RS00160 PF12464 Maltose acetyltransferase DP_RS00160 PF14602 Hexapeptide repeat of succinyl-transferase DP_RS00160 PF00132 Bacterial transferase hexapeptide (six repeats) DP_RS00180 PF00583 Acetyltransferase (GNAT) family DP_RS00190 PF08889 WbqC-like protein family DP_RS00195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DP_RS00200 PF00483 Nucleotidyl transferase DP_RS00205 PF16363 GDP-mannose 4,6 dehydratase DP_RS00210 PF01370 NAD dependent epimerase/dehydratase family DP_RS00215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DP_RS00215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DP_RS00215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DP_RS00220 PF02719 Polysaccharide biosynthesis protein DP_RS00245 PF01261 Xylose isomerase-like TIM barrel DP_RS00260 PF07478 D-ala D-ala ligase C-terminus DP_RS00260 PF01820 D-ala D-ala ligase N-terminus DP_RS00265 PF01565 FAD binding domain DP_RS00265 PF02913 FAD linked oxidases, C-terminal domain DP_RS00270 PF01165 Ribosomal protein S21 DP_RS00275 PF01368 DHH family DP_RS00275 PF00571 CBS domain DP_RS00275 PF02272 DHHA1 domain DP_RS00275 PF01743 Poly A polymerase head domain DP_RS00275 PF12627 Probable RNA and SrmB- binding site of polymerase A DP_RS00280 PF02163 Peptidase family M50 DP_RS00295 PF03477 ATP cone domain DP_RS00295 PF13597 Anaerobic ribonucleoside-triphosphate reductase DP_RS00300 PF04055 Radical SAM superfamily DP_RS00310 PF00501 AMP-binding enzyme DP_RS00335 PF02558 Ketopantoate reductase PanE/ApbA DP_RS00335 PF08546 Ketopantoate reductase PanE/ApbA C terminal DP_RS00350 PF00009 Elongation factor Tu GTP binding domain DP_RS00350 PF03144 Elongation factor Tu domain 2 DP_RS00350 PF00679 Elongation factor G C-terminus DP_RS00360 PF13460 NAD(P)H-binding DP_RS00360 PF11066 Protein of unknown function (DUF2867) DP_RS00365 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DP_RS00370 PF13472 GDSL-like Lipase/Acylhydrolase family DP_RS00375 PF00664 ABC transporter transmembrane region DP_RS00375 PF00005 ABC transporter DP_RS00380 PF00664 ABC transporter transmembrane region DP_RS00380 PF00005 ABC transporter DP_RS00415 PF01063 Amino-transferase class IV DP_RS00420 PF01810 LysE type translocator DP_RS00425 PF01553 Acyltransferase DP_RS00425 PF00501 AMP-binding enzyme DP_RS00430 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS00435 PF00497 Bacterial extracellular solute-binding proteins, family 3 DP_RS00440 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS00450 PF01402 Ribbon-helix-helix protein, copG family DP_RS00450 PF08753 NikR C terminal nickel binding domain DP_RS00470 PF02535 ZIP Zinc transporter DP_RS00475 PF03553 Na+/H+ antiporter family DP_RS00490 PF03840 Preprotein translocase SecG subunit DP_RS00495 PF00121 Triosephosphate isomerase DP_RS00500 PF00162 Phosphoglycerate kinase DP_RS00505 PF00583 Acetyltransferase (GNAT) family DP_RS00510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DP_RS00510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DP_RS00515 PF03749 Sugar fermentation stimulation protein RE domain DP_RS00515 PF17746 SfsA N-terminal OB domain DP_RS00520 PF01979 Amidohydrolase family DP_RS00525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DP_RS00525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DP_RS00530 PF10502 Signal peptidase, peptidase S26 DP_RS00555 PF11741 AMIN domain DP_RS00555 PF00263 Bacterial type II and III secretion system protein DP_RS00555 PF03958 Bacterial type II/III secretion system short domain DP_RS00555 PF07660 Secretin and TonB N terminus short domain DP_RS00560 PF03958 Bacterial type II/III secretion system short domain DP_RS00560 PF00263 Bacterial type II and III secretion system protein DP_RS00570 PF02556 Preprotein translocase subunit SecB DP_RS00575 PF17755 UvrA DNA-binding domain DP_RS00575 PF17760 UvrA interaction domain DP_RS00580 PF13380 CoA binding domain DP_RS00585 PF02091 Glycyl-tRNA synthetase alpha subunit DP_RS00600 PF02580 D-Tyr-tRNA(Tyr) deacylase DP_RS00605 PF08367 Peptidase M16C associated DP_RS00605 PF00675 Insulinase (Peptidase family M16) DP_RS00605 PF05193 Peptidase M16 inactive domain DP_RS00625 PF01029 NusB family DP_RS00625 PF01189 16S rRNA methyltransferase RsmB/F DP_RS00635 PF00557 Metallopeptidase family M24 DP_RS00635 PF01321 Creatinase/Prolidase N-terminal domain DP_RS00645 PF00330 Aconitase family (aconitate hydratase) DP_RS00650 PF00571 CBS domain DP_RS00650 PF02272 DHHA1 domain DP_RS00650 PF01743 Poly A polymerase head domain DP_RS00650 PF01368 DHH family DP_RS00650 PF12627 Probable RNA and SrmB- binding site of polymerase A DP_RS00655 PF00004 ATPase family associated with various cellular activities (AAA) DP_RS00655 PF05362 Lon protease (S16) C-terminal proteolytic domain DP_RS00655 PF02190 ATP-dependent protease La (LON) substrate-binding domain DP_RS00670 PF01022 Bacterial regulatory protein, arsR family DP_RS00690 PF00899 ThiF family DP_RS00695 PF00375 Sodium:dicarboxylate symporter family DP_RS00720 PF07670 Nucleoside recognition DP_RS00720 PF02421 Ferrous iron transport protein B DP_RS00720 PF07664 Ferrous iron transport protein B C terminus DP_RS00725 PF01545 Cation efflux family DP_RS00725 PF16916 Dimerisation domain of Zinc Transporter DP_RS00735 PF00696 Amino acid kinase family DP_RS00745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DP_RS00750 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS00755 PF12911 N-terminal TM domain of oligopeptide transport permease C DP_RS00755 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS00760 PF00005 ABC transporter DP_RS00760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DP_RS00765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DP_RS00765 PF00005 ABC transporter DP_RS00770 PF03061 Thioesterase superfamily DP_RS00780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DP_RS00780 PF00529 HlyD membrane-fusion protein of T1SS DP_RS00785 PF07690 Major Facilitator Superfamily DP_RS00805 PF00374 Nickel-dependent hydrogenase DP_RS00810 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DP_RS00810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DP_RS00815 PF02743 Cache domain DP_RS00815 PF00672 HAMP domain DP_RS00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS00820 PF01740 STAS domain DP_RS00820 PF00916 Sulfate permease family DP_RS00830 PF13673 Acetyltransferase (GNAT) domain DP_RS00830 PF00958 GMP synthase C terminal domain DP_RS00830 PF13302 Acetyltransferase (GNAT) domain DP_RS00830 PF00117 Glutamine amidotransferase class-I DP_RS00830 PF03352 Methyladenine glycosylase DP_RS00835 PF01242 6-pyruvoyl tetrahydropterin synthase DP_RS00840 PF04055 Radical SAM superfamily DP_RS00845 PF06508 Queuosine biosynthesis protein QueC DP_RS00850 PF14489 QueF-like protein DP_RS00850 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DP_RS00895 PF13356 Arm DNA-binding domain DP_RS00895 PF00589 Phage integrase family DP_RS00930 PF18019 HD domain DP_RS00955 PF00118 TCP-1/cpn60 chaperonin family DP_RS00960 PF00166 Chaperonin 10 Kd subunit DP_RS00965 PF01063 Amino-transferase class IV DP_RS00970 PF01594 AI-2E family transporter DP_RS00975 PF02915 Rubrerythrin DP_RS00980 PF13411 MerR HTH family regulatory protein DP_RS00980 PF07739 TipAS antibiotic-recognition domain DP_RS00990 PF01018 GTP1/OBG DP_RS00990 PF01926 50S ribosome-binding GTPase DP_RS00990 PF04055 Radical SAM superfamily DP_RS01015 PF00990 Diguanylate cyclase, GGDEF domain DP_RS01035 PF00571 CBS domain DP_RS01035 PF00005 ABC transporter DP_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS01045 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DP_RS01055 PF00924 Mechanosensitive ion channel DP_RS01065 PF06180 Cobalt chelatase (CbiK) DP_RS01080 PF01032 FecCD transport family DP_RS01085 PF00005 ABC transporter DP_RS01095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DP_RS01095 PF07685 CobB/CobQ-like glutamine amidotransferase domain DP_RS01100 PF02570 Precorrin-8X methylmutase DP_RS01105 PF01888 CbiD DP_RS01110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DP_RS01115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DP_RS01125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DP_RS01125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DP_RS01140 PF00691 OmpA family DP_RS01140 PF05736 OprF membrane domain DP_RS01155 PF01699 Sodium/calcium exchanger protein DP_RS01160 PF02666 Phosphatidylserine decarboxylase DP_RS01165 PF17783 CvfB-like winged helix domain DP_RS01165 PF13509 S1 domain DP_RS01245 PF00501 AMP-binding enzyme DP_RS01245 PF13193 AMP-binding enzyme C-terminal domain DP_RS01250 PF13378 Enolase C-terminal domain-like DP_RS01250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DP_RS01255 PF00378 Enoyl-CoA hydratase/isomerase DP_RS01260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DP_RS01260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DP_RS01265 PF00425 chorismate binding enzyme DP_RS01270 PF03061 Thioesterase superfamily DP_RS01280 PF02542 YgbB family DP_RS01280 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DP_RS01285 PF07687 Peptidase dimerisation domain DP_RS01285 PF01546 Peptidase family M20/M25/M40 DP_RS01290 PF13537 Glutamine amidotransferase domain DP_RS01290 PF00156 Phosphoribosyl transferase domain DP_RS01310 PF02625 XdhC and CoxI family DP_RS01310 PF13478 XdhC Rossmann domain DP_RS01315 PF00501 AMP-binding enzyme DP_RS01315 PF14535 AMP-binding enzyme C-terminal domain DP_RS01320 PF04055 Radical SAM superfamily DP_RS01320 PF13186 Iron-sulfur cluster-binding domain DP_RS01340 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DP_RS01340 PF01266 FAD dependent oxidoreductase DP_RS01345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DP_RS01345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DP_RS01345 PF00111 2Fe-2S iron-sulfur cluster binding domain DP_RS01345 PF01799 [2Fe-2S] binding domain DP_RS01355 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS01360 PF09335 SNARE associated Golgi protein DP_RS01375 PF00183 Hsp90 protein DP_RS01380 PF00743 Flavin-binding monooxygenase-like DP_RS01385 PF00308 Bacterial dnaA protein DP_RS01385 PF08299 Bacterial dnaA protein helix-turn-helix DP_RS01385 PF11638 DnaA N-terminal domain DP_RS01395 PF00156 Phosphoribosyl transferase domain DP_RS01400 PF01103 Surface antigen DP_RS01400 PF07244 Surface antigen variable number repeat DP_RS01405 PF02559 CarD-like/TRCF domain DP_RS01405 PF00270 DEAD/DEAH box helicase DP_RS01405 PF00271 Helicase conserved C-terminal domain DP_RS01405 PF17757 UvrB interaction domain DP_RS01405 PF03461 TRCF domain DP_RS01410 PF13419 Haloacid dehalogenase-like hydrolase DP_RS01415 PF08442 ATP-grasp domain DP_RS01415 PF00549 CoA-ligase DP_RS01420 PF03009 Glycerophosphoryl diester phosphodiesterase family DP_RS01425 PF02629 CoA binding domain DP_RS01425 PF00549 CoA-ligase DP_RS01450 PF04231 Endonuclease I DP_RS01455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS01455 PF16591 Helical bimodular sensor domain DP_RS01455 PF00672 HAMP domain DP_RS01460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DP_RS01460 PF03466 LysR substrate binding domain DP_RS01475 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DP_RS01475 PF04055 Radical SAM superfamily DP_RS01480 PF03099 Biotin/lipoate A/B protein ligase family DP_RS01485 PF00266 Aminotransferase class-V DP_RS01490 PF02347 Glycine cleavage system P-protein DP_RS01495 PF01597 Glycine cleavage H-protein DP_RS01500 PF01571 Aminomethyltransferase folate-binding domain DP_RS01500 PF08669 Glycine cleavage T-protein C-terminal barrel domain DP_RS01510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DP_RS01510 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS01525 PF00689 Cation transporting ATPase, C-terminus DP_RS01525 PF00690 Cation transporter/ATPase, N-terminus DP_RS01535 PF00534 Glycosyl transferases group 1 DP_RS01535 PF13439 Glycosyltransferase Family 4 DP_RS01545 PF00186 Dihydrofolate reductase DP_RS01555 PF00360 Phytochrome region DP_RS01555 PF00563 EAL domain DP_RS01555 PF01590 GAF domain DP_RS01555 PF00990 Diguanylate cyclase, GGDEF domain DP_RS01560 PF01625 Peptide methionine sulfoxide reductase DP_RS01565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DP_RS01565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DP_RS01570 PF01066 CDP-alcohol phosphatidyltransferase DP_RS01575 PF00005 ABC transporter DP_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS01600 PF13416 Bacterial extracellular solute-binding protein DP_RS01610 PF00909 Ammonium Transporter Family DP_RS01615 PF00543 Nitrogen regulatory protein P-II DP_RS01620 PF01048 Phosphorylase superfamily DP_RS01630 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS01635 PF12849 PBP superfamily domain DP_RS01655 PF03009 Glycerophosphoryl diester phosphodiesterase family DP_RS01675 PF00072 Response regulator receiver domain DP_RS01675 PF02954 Bacterial regulatory protein, Fis family DP_RS01675 PF00158 Sigma-54 interaction domain DP_RS01705 PF03264 NapC/NirT cytochrome c family, N-terminal region DP_RS01710 PF02335 Cytochrome c552 DP_RS01715 PF00005 ABC transporter DP_RS01720 PF03992 Antibiotic biosynthesis monooxygenase DP_RS01725 PF07556 Protein of unknown function (DUF1538) DP_RS01730 PF07556 Protein of unknown function (DUF1538) DP_RS01750 PF10415 Fumarase C C-terminus DP_RS01750 PF00206 Lyase DP_RS01755 PF03605 Anaerobic c4-dicarboxylate membrane transporter DP_RS01765 PF02954 Bacterial regulatory protein, Fis family DP_RS01765 PF13426 PAS domain DP_RS01765 PF00158 Sigma-54 interaction domain DP_RS01780 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS01785 PF03883 Peroxide stress protein YaaA DP_RS01805 PF01253 Translation initiation factor SUI1 DP_RS01810 PF00313 'Cold-shock' DNA-binding domain DP_RS01850 PF07228 Stage II sporulation protein E (SpoIIE) DP_RS01850 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DP_RS01860 PF00873 AcrB/AcrD/AcrF family DP_RS01865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DP_RS01880 PF00512 His Kinase A (phospho-acceptor) domain DP_RS01880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS01880 PF00989 PAS fold DP_RS01885 PF00158 Sigma-54 interaction domain DP_RS01885 PF02954 Bacterial regulatory protein, Fis family DP_RS01885 PF00072 Response regulator receiver domain DP_RS01895 PF00005 ABC transporter DP_RS01900 PF02653 Branched-chain amino acid transport system / permease component DP_RS01915 PF00582 Universal stress protein family DP_RS01920 PF01925 Sulfite exporter TauE/SafE DP_RS01925 PF00282 Pyridoxal-dependent decarboxylase conserved domain DP_RS01930 PF06826 Predicted Permease Membrane Region DP_RS01940 PF02463 RecF/RecN/SMC N terminal domain DP_RS01960 PF03741 Integral membrane protein TerC family DP_RS01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS01965 PF00512 His Kinase A (phospho-acceptor) domain DP_RS01970 PF00285 Citrate synthase, C-terminal domain DP_RS01980 PF01863 Protein of unknown function DUF45 DP_RS02020 PF09382 RQC domain DP_RS02020 PF16124 RecQ zinc-binding DP_RS02020 PF00270 DEAD/DEAH box helicase DP_RS02020 PF00271 Helicase conserved C-terminal domain DP_RS02020 PF00570 HRDC domain DP_RS02050 PF02796 Helix-turn-helix domain of resolvase DP_RS02050 PF00239 Resolvase, N terminal domain DP_RS02060 PF13538 UvrD-like helicase C-terminal domain DP_RS02060 PF14490 Helix-hairpin-helix containing domain DP_RS02060 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DP_RS02110 PF13356 Arm DNA-binding domain DP_RS02110 PF14659 Phage integrase, N-terminal SAM-like domain DP_RS02110 PF00589 Phage integrase family DP_RS02120 PF01066 CDP-alcohol phosphatidyltransferase DP_RS02125 PF01464 Transglycosylase SLT domain DP_RS02130 PF00923 Transaldolase/Fructose-6-phosphate aldolase DP_RS02140 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DP_RS02145 PF05173 Dihydrodipicolinate reductase, C-terminus DP_RS02145 PF01113 Dihydrodipicolinate reductase, N-terminus DP_RS02150 PF00701 Dihydrodipicolinate synthetase family DP_RS02155 PF01678 Diaminopimelate epimerase DP_RS02165 PF00206 Lyase DP_RS02165 PF14698 Argininosuccinate lyase C-terminal DP_RS02170 PF00764 Arginosuccinate synthase DP_RS02175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DP_RS02175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DP_RS02180 PF00202 Aminotransferase class-III DP_RS02185 PF00696 Amino acid kinase family DP_RS02195 PF00005 ABC transporter DP_RS02200 PF00309 Sigma-54 factor, Activator interacting domain (AID) DP_RS02200 PF04963 Sigma-54 factor, core binding domain DP_RS02200 PF04552 Sigma-54, DNA binding domain DP_RS02220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS02235 PF00156 Phosphoribosyl transferase domain DP_RS02240 PF00696 Amino acid kinase family DP_RS02240 PF13840 ACT domain DP_RS02245 PF00753 Metallo-beta-lactamase superfamily DP_RS02255 PF01546 Peptidase family M20/M25/M40 DP_RS02255 PF07687 Peptidase dimerisation domain DP_RS02260 PF00005 ABC transporter DP_RS02260 PF03459 TOBE domain DP_RS02265 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS02280 PF01479 S4 domain DP_RS02280 PF00849 RNA pseudouridylate synthase DP_RS02285 PF00474 Sodium:solute symporter family DP_RS02295 PF00072 Response regulator receiver domain DP_RS02295 PF00990 Diguanylate cyclase, GGDEF domain DP_RS02305 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS02315 PF03459 TOBE domain DP_RS02315 PF00005 ABC transporter DP_RS02325 PF00512 His Kinase A (phospho-acceptor) domain DP_RS02325 PF00989 PAS fold DP_RS02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS02325 PF08447 PAS fold DP_RS02330 PF02954 Bacterial regulatory protein, Fis family DP_RS02330 PF00072 Response regulator receiver domain DP_RS02330 PF00158 Sigma-54 interaction domain DP_RS02350 PF01926 50S ribosome-binding GTPase DP_RS02350 PF07650 KH domain DP_RS02365 PF00072 Response regulator receiver domain DP_RS02365 PF02954 Bacterial regulatory protein, Fis family DP_RS02365 PF00158 Sigma-54 interaction domain DP_RS02370 PF12800 4Fe-4S binding domain DP_RS02370 PF13247 4Fe-4S dicluster domain DP_RS02375 PF02906 Iron only hydrogenase large subunit, C-terminal domain DP_RS02375 PF00037 4Fe-4S binding domain DP_RS02375 PF02256 Iron hydrogenase small subunit DP_RS02375 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DP_RS02380 PF13247 4Fe-4S dicluster domain DP_RS02385 PF01568 Molydopterin dinucleotide binding domain DP_RS02385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS02385 PF00384 Molybdopterin oxidoreductase DP_RS02390 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DP_RS02390 PF01568 Molydopterin dinucleotide binding domain DP_RS02390 PF00384 Molybdopterin oxidoreductase DP_RS02390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS02390 PF00037 4Fe-4S binding domain DP_RS02395 PF02954 Bacterial regulatory protein, Fis family DP_RS02395 PF13426 PAS domain DP_RS02395 PF00158 Sigma-54 interaction domain DP_RS02400 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS02405 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS02415 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS02420 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DP_RS02420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS02430 PF01042 Endoribonuclease L-PSP DP_RS02435 PF17806 Sarcosine oxidase A3 domain DP_RS02435 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS02445 PF01266 FAD dependent oxidoreductase DP_RS02450 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS02470 PF01209 ubiE/COQ5 methyltransferase family DP_RS02475 PF00586 AIR synthase related protein, N-terminal domain DP_RS02475 PF02769 AIR synthase related protein, C-terminal domain DP_RS02490 PF02110 Hydroxyethylthiazole kinase family DP_RS02495 PF00005 ABC transporter DP_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS02505 PF09084 NMT1/THI5 like DP_RS02515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DP_RS02515 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS02520 PF13187 4Fe-4S dicluster domain DP_RS02520 PF01645 Conserved region in glutamate synthase DP_RS02530 PF13187 4Fe-4S dicluster domain DP_RS02530 PF01645 Conserved region in glutamate synthase DP_RS02535 PF01810 LysE type translocator DP_RS02550 PF03412 Peptidase C39 family DP_RS02550 PF00005 ABC transporter DP_RS02550 PF00664 ABC transporter transmembrane region DP_RS02560 PF00072 Response regulator receiver domain DP_RS02560 PF00196 Bacterial regulatory proteins, luxR family DP_RS02570 PF03707 Bacterial signalling protein N terminal repeat DP_RS02570 PF00990 Diguanylate cyclase, GGDEF domain DP_RS02570 PF00563 EAL domain DP_RS02585 PF00271 Helicase conserved C-terminal domain DP_RS02585 PF04851 Type III restriction enzyme, res subunit DP_RS02600 PF01668 SmpB protein DP_RS02610 PF01435 Peptidase family M48 DP_RS02615 PF13476 AAA domain DP_RS02625 PF01048 Phosphorylase superfamily DP_RS02630 PF02664 S-Ribosylhomocysteinase (LuxS) DP_RS02645 PF00255 Glutathione peroxidase DP_RS02660 PF01970 Tripartite tricarboxylate transporter TctA family DP_RS02675 PF02660 Glycerol-3-phosphate acyltransferase DP_RS02680 PF01590 GAF domain DP_RS02680 PF00158 Sigma-54 interaction domain DP_RS02685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DP_RS02685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DP_RS02690 PF00202 Aminotransferase class-III DP_RS02695 PF00465 Iron-containing alcohol dehydrogenase DP_RS02705 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DP_RS02705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DP_RS02710 PF00202 Aminotransferase class-III DP_RS02715 PF00465 Iron-containing alcohol dehydrogenase DP_RS02740 PF18267 Rubredoxin NAD+ reductase C-terminal domain DP_RS02740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DP_RS02740 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS02740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DP_RS02740 PF04324 BFD-like [2Fe-2S] binding domain DP_RS02765 PF13193 AMP-binding enzyme C-terminal domain DP_RS02765 PF00501 AMP-binding enzyme DP_RS02770 PF00816 H-NS histone family DP_RS02780 PF07085 DRTGG domain DP_RS02780 PF01515 Phosphate acetyl/butaryl transferase DP_RS02785 PF00871 Acetokinase family DP_RS02790 PF01430 Hsp33 protein DP_RS02800 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS02805 PF00005 ABC transporter DP_RS02805 PF08402 TOBE domain DP_RS02815 PF00994 Probable molybdopterin binding domain DP_RS02815 PF02464 Competence-damaged protein DP_RS02840 PF01336 OB-fold nucleic acid binding domain DP_RS02840 PF00152 tRNA synthetases class II (D, K and N) DP_RS02840 PF02938 GAD domain DP_RS02845 PF03129 Anticodon binding domain DP_RS02845 PF13393 Histidyl-tRNA synthetase DP_RS02865 PF10518 TAT (twin-arginine translocation) pathway signal sequence DP_RS02865 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DP_RS02865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DP_RS02870 PF00374 Nickel-dependent hydrogenase DP_RS02875 PF01292 Prokaryotic cytochrome b561 DP_RS02880 PF00708 Acylphosphatase DP_RS02880 PF01300 Telomere recombination DP_RS02880 PF07503 HypF finger DP_RS02880 PF17788 HypF Kae1-like domain DP_RS02885 PF01455 HupF/HypC family DP_RS02890 PF01924 Hydrogenase formation hypA family DP_RS02895 PF02769 AIR synthase related protein, C-terminal domain DP_RS02895 PF00586 AIR synthase related protein, N-terminal domain DP_RS02900 PF01750 Hydrogenase maturation protease DP_RS02910 PF02492 CobW/HypB/UreG, nucleotide-binding domain DP_RS02950 PF03313 Serine dehydratase alpha chain DP_RS02960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DP_RS02960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DP_RS02960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DP_RS02965 PF01435 Peptidase family M48 DP_RS02970 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS02970 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DP_RS02975 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DP_RS02975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS02980 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS02990 PF00072 Response regulator receiver domain DP_RS02990 PF00486 Transcriptional regulatory protein, C terminal DP_RS02995 PF00989 PAS fold DP_RS02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS02995 PF00512 His Kinase A (phospho-acceptor) domain DP_RS02995 PF16736 Single Cache-like DP_RS03000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DP_RS03000 PF03900 Porphobilinogen deaminase, C-terminal domain DP_RS03020 PF06942 GlpM protein DP_RS03065 PF01228 Glycine radical DP_RS03065 PF02901 Pyruvate formate lyase-like DP_RS03070 PF00155 Aminotransferase class I and II DP_RS03085 PF00534 Glycosyl transferases group 1 DP_RS03085 PF13439 Glycosyltransferase Family 4 DP_RS03100 PF12392 Collagenase DP_RS03100 PF01136 Peptidase family U32 DP_RS03125 PF00753 Metallo-beta-lactamase superfamily DP_RS03125 PF10996 Beta-Casp domain DP_RS03125 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DP_RS03140 PF00563 EAL domain DP_RS03140 PF03707 Bacterial signalling protein N terminal repeat DP_RS03140 PF00990 Diguanylate cyclase, GGDEF domain DP_RS03145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DP_RS03145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS03155 PF01784 NIF3 (NGG1p interacting factor 3) DP_RS03165 PF07726 ATPase family associated with various cellular activities (AAA) DP_RS03165 PF17863 AAA lid domain DP_RS03170 PF01882 Protein of unknown function DUF58 DP_RS03180 PF00092 von Willebrand factor type A domain DP_RS03200 PF02224 Cytidylate kinase DP_RS03205 PF00155 Aminotransferase class I and II DP_RS03210 PF01425 Amidase DP_RS03215 PF02686 Glu-tRNAGln amidotransferase C subunit DP_RS03220 PF00072 Response regulator receiver domain DP_RS03225 PF01812 5-formyltetrahydrofolate cyclo-ligase family DP_RS03235 PF00712 DNA polymerase III beta subunit, N-terminal domain DP_RS03235 PF02768 DNA polymerase III beta subunit, C-terminal domain DP_RS03235 PF02767 DNA polymerase III beta subunit, central domain DP_RS03240 PF01751 Toprim domain DP_RS03240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS03240 PF00986 DNA gyrase B subunit, carboxyl terminus DP_RS03240 PF18053 DNA gyrase B subunit insert domain DP_RS03240 PF00204 DNA gyrase B DP_RS03245 PF03989 DNA gyrase C-terminal domain, beta-propeller DP_RS03245 PF00521 DNA gyrase/topoisomerase IV, subunit A DP_RS03250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DP_RS03250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DP_RS03260 PF04333 MlaA lipoprotein DP_RS03280 PF00106 short chain dehydrogenase DP_RS03285 PF13607 Succinyl-CoA ligase like flavodoxin domain DP_RS03285 PF13380 CoA binding domain DP_RS03290 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DP_RS03290 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DP_RS03295 PF08502 LeuA allosteric (dimerisation) domain DP_RS03295 PF00682 HMGL-like DP_RS03300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DP_RS03300 PF00056 lactate/malate dehydrogenase, NAD binding domain DP_RS03305 PF07308 Protein of unknown function (DUF1456) DP_RS03325 PF05209 Septum formation inhibitor MinC, N-terminal domain DP_RS03325 PF03775 Septum formation inhibitor MinC, C-terminal domain DP_RS03330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DP_RS03335 PF03776 Septum formation topological specificity factor MinE DP_RS03340 PF06965 Na+/H+ antiporter 1 DP_RS03365 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DP_RS03365 PF02779 Transketolase, pyrimidine binding domain DP_RS03365 PF02780 Transketolase, C-terminal domain DP_RS03375 PF02608 ABC transporter substrate-binding protein PnrA-like DP_RS03380 PF02653 Branched-chain amino acid transport system / permease component DP_RS03385 PF02653 Branched-chain amino acid transport system / permease component DP_RS03390 PF00156 Phosphoribosyl transferase domain DP_RS03395 PF00005 ABC transporter DP_RS03400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS03400 PF00384 Molybdopterin oxidoreductase DP_RS03400 PF01568 Molydopterin dinucleotide binding domain DP_RS03405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS03405 PF00384 Molybdopterin oxidoreductase DP_RS03405 PF12838 4Fe-4S dicluster domain DP_RS03405 PF01568 Molydopterin dinucleotide binding domain DP_RS03405 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DP_RS03410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DP_RS03410 PF00037 4Fe-4S binding domain DP_RS03410 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DP_RS03425 PF00364 Biotin-requiring enzyme DP_RS03430 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DP_RS03435 PF02470 MlaD protein DP_RS03440 PF04403 Paraquat-inducible protein A DP_RS03460 PF00474 Sodium:solute symporter family DP_RS03465 PF01177 Asp/Glu/Hydantoin racemase DP_RS03520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DP_RS03525 PF09186 Domain of unknown function (DUF1949) DP_RS03525 PF01205 Uncharacterized protein family UPF0029 DP_RS03535 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DP_RS03535 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DP_RS03535 PF02769 AIR synthase related protein, C-terminal domain DP_RS03545 PF01235 Sodium:alanine symporter family DP_RS03550 PF01725 Ham1 family DP_RS03555 PF02677 Epoxyqueuosine reductase QueH DP_RS03560 PF00158 Sigma-54 interaction domain DP_RS03560 PF01590 GAF domain DP_RS03560 PF02954 Bacterial regulatory protein, Fis family DP_RS03580 PF02910 Fumarate reductase flavoprotein C-term DP_RS03580 PF00890 FAD binding domain DP_RS03595 PF02637 GatB domain DP_RS03595 PF02934 GatB/GatE catalytic domain DP_RS03600 PF04002 RadC-like JAB domain DP_RS03605 PF04055 Radical SAM superfamily DP_RS03605 PF06969 HemN C-terminal domain DP_RS03610 PF01928 CYTH domain DP_RS03620 PF18073 Rubredoxin metal binding domain DP_RS03635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DP_RS03640 PF02386 Cation transport protein DP_RS03645 PF02080 TrkA-C domain DP_RS03645 PF02254 TrkA-N domain DP_RS03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DP_RS03650 PF03466 LysR substrate binding domain DP_RS03660 PF00881 Nitroreductase family DP_RS03760 PF09335 SNARE associated Golgi protein DP_RS03770 PF01170 Putative RNA methylase family UPF0020 DP_RS03770 PF10672 S-adenosylmethionine-dependent methyltransferase DP_RS03770 PF02926 THUMP domain DP_RS03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS03775 PF00512 His Kinase A (phospho-acceptor) domain DP_RS03775 PF09308 LuxQ, periplasmic DP_RS03775 PF00072 Response regulator receiver domain DP_RS03780 PF00108 Thiolase, N-terminal domain DP_RS03780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DP_RS03785 PF03063 Prismane/CO dehydrogenase family DP_RS03800 PF16868 NMT1-like family DP_RS03805 PF01327 Polypeptide deformylase DP_RS03810 PF02911 Formyl transferase, C-terminal domain DP_RS03810 PF00551 Formyl transferase DP_RS03815 PF01969 Protein of unknown function DUF111 DP_RS03820 PF04608 Phosphatidylglycerophosphatase A DP_RS03830 PF00072 Response regulator receiver domain DP_RS03830 PF00486 Transcriptional regulatory protein, C terminal DP_RS03840 PF00672 HAMP domain DP_RS03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS03840 PF00512 His Kinase A (phospho-acceptor) domain DP_RS03850 PF01474 Class-II DAHP synthetase family DP_RS03855 PF17820 PDZ domain DP_RS03855 PF13180 PDZ domain DP_RS03860 PF00005 ABC transporter DP_RS03865 PF02361 Cobalt transport protein DP_RS03880 PF01891 Cobalt uptake substrate-specific transmembrane region DP_RS03885 PF00042 Globin DP_RS03885 PF00970 Oxidoreductase FAD-binding domain DP_RS03885 PF00175 Oxidoreductase NAD-binding domain DP_RS03890 PF01980 tRNA-methyltransferase O DP_RS03890 PF18389 TrmO C-terminal domain DP_RS03905 PF00793 DAHP synthetase I family DP_RS03910 PF00117 Glutamine amidotransferase class-I DP_RS03910 PF06418 CTP synthase N-terminus DP_RS03915 PF00939 Sodium:sulfate symporter transmembrane region DP_RS03920 PF00939 Sodium:sulfate symporter transmembrane region DP_RS03930 PF13237 4Fe-4S dicluster domain DP_RS03930 PF10531 SLBB domain DP_RS03930 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DP_RS03930 PF13375 RnfC Barrel sandwich hybrid domain DP_RS03935 PF03116 NQR2, RnfD, RnfE family DP_RS03940 PF04205 FMN-binding domain DP_RS03945 PF02508 Rnf-Nqr subunit, membrane protein DP_RS03955 PF13187 4Fe-4S dicluster domain DP_RS03955 PF04060 Putative Fe-S cluster DP_RS03960 PF02424 ApbE family DP_RS03965 PF01734 Patatin-like phospholipase DP_RS03970 PF00180 Isocitrate/isopropylmalate dehydrogenase DP_RS03975 PF05167 Uncharacterised ACR (DUF711) DP_RS03990 PF06071 Protein of unknown function (DUF933) DP_RS03990 PF01926 50S ribosome-binding GTPase DP_RS03995 PF01336 OB-fold nucleic acid binding domain DP_RS03995 PF01966 HD domain DP_RS04005 PF04468 PSP1 C-terminal conserved region DP_RS04010 PF08264 Anticodon-binding domain of tRNA DP_RS04010 PF09334 tRNA synthetases class I (M) DP_RS04010 PF01588 Putative tRNA binding domain DP_RS04015 PF02325 YGGT family DP_RS04025 PF02594 Uncharacterised ACR, YggU family COG1872 DP_RS04030 PF00121 Triosephosphate isomerase DP_RS04035 PF03109 ABC1 family DP_RS04045 PF10410 DnaB-helicase binding domain of primase DP_RS04045 PF08278 DNA primase DnaG DnaB-binding DP_RS04045 PF01807 CHC2 zinc finger DP_RS04045 PF13662 Toprim domain DP_RS04045 PF08275 DNA primase catalytic core, N-terminal domain DP_RS04055 PF17782 DprA winged helix domain DP_RS04055 PF02481 DNA recombination-mediator protein A DP_RS04060 PF00834 Ribulose-phosphate 3 epimerase family DP_RS04065 PF00342 Phosphoglucose isomerase DP_RS04070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DP_RS04070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DP_RS04075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DP_RS04075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DP_RS04080 PF08679 Dissimilatory sulfite reductase D (DsrD) DP_RS04085 PF03099 Biotin/lipoate A/B protein ligase family DP_RS04085 PF08279 HTH domain DP_RS04085 PF02237 Biotin protein ligase C terminal domain DP_RS04090 PF02773 S-adenosylmethionine synthetase, C-terminal domain DP_RS04090 PF00438 S-adenosylmethionine synthetase, N-terminal domain DP_RS04090 PF02772 S-adenosylmethionine synthetase, central domain DP_RS04095 PF00571 CBS domain DP_RS04095 PF01380 SIS domain DP_RS04115 PF07549 SecD/SecF GG Motif DP_RS04115 PF02355 Protein export membrane protein DP_RS04120 PF00731 AIR carboxylase DP_RS04125 PF13525 Outer membrane lipoprotein DP_RS04130 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS04135 PF00085 Thioredoxin DP_RS04140 PF00202 Aminotransferase class-III DP_RS04155 PF00119 ATP synthase A chain DP_RS04160 PF00137 ATP synthase subunit C DP_RS04165 PF18693 TRAM domain DP_RS04165 PF00919 Uncharacterized protein family UPF0004 DP_RS04165 PF04055 Radical SAM superfamily DP_RS04170 PF00216 Bacterial DNA-binding protein DP_RS04180 PF01202 Shikimate kinase DP_RS04185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DP_RS04185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DP_RS04190 PF00391 PEP-utilising enzyme, mobile domain DP_RS04190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DP_RS04190 PF02896 PEP-utilising enzyme, TIM barrel domain DP_RS04195 PF01022 Bacterial regulatory protein, arsR family DP_RS04205 PF00209 Sodium:neurotransmitter symporter family DP_RS04210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DP_RS04210 PF01411 tRNA synthetases class II (A) DP_RS04210 PF02272 DHHA1 domain DP_RS04220 PF00430 ATP synthase B/B' CF(0) DP_RS04225 PF00213 ATP synthase delta (OSCP) subunit DP_RS04230 PF00306 ATP synthase alpha/beta chain, C terminal domain DP_RS04230 PF02874 ATP synthase alpha/beta family, beta-barrel domain DP_RS04230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DP_RS04235 PF00231 ATP synthase DP_RS04240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DP_RS04240 PF02874 ATP synthase alpha/beta family, beta-barrel domain DP_RS04245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DP_RS04245 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DP_RS04250 PF00488 MutS domain V DP_RS04250 PF05190 MutS family domain IV DP_RS04250 PF05192 MutS domain III DP_RS04250 PF05188 MutS domain II DP_RS04250 PF01624 MutS domain I DP_RS04265 PF01070 FMN-dependent dehydrogenase DP_RS04275 PF09285 Elongation factor P, C-terminal DP_RS04275 PF01132 Elongation factor P (EF-P) OB domain DP_RS04275 PF08207 Elongation factor P (EF-P) KOW-like domain DP_RS04280 PF00152 tRNA synthetases class II (D, K and N) DP_RS04285 PF11842 Domain of unknown function (DUF3362) DP_RS04285 PF08497 Radical SAM N-terminal DP_RS04285 PF04055 Radical SAM superfamily DP_RS04290 PF03600 Citrate transporter DP_RS04295 PF00916 Sulfate permease family DP_RS04295 PF01740 STAS domain DP_RS04300 PF00484 Carbonic anhydrase DP_RS04305 PF01790 Prolipoprotein diacylglyceryl transferase DP_RS04310 PF13932 GidA associated domain DP_RS04310 PF01134 Glucose inhibited division protein A DP_RS04315 PF05175 Methyltransferase small domain DP_RS04320 PF00468 Ribosomal protein L34 DP_RS04325 PF00825 Ribonuclease P DP_RS04330 PF14849 YidC periplasmic domain DP_RS04330 PF02096 60Kd inner membrane protein DP_RS04340 PF01926 50S ribosome-binding GTPase DP_RS04340 PF10396 GTP-binding protein TrmE N-terminus DP_RS04340 PF12631 MnmE helical domain DP_RS04350 PF03400 IS1 transposase DP_RS04355 PF03453 MoeA N-terminal region (domain I and II) DP_RS04355 PF03454 MoeA C-terminal region (domain IV) DP_RS04355 PF00994 Probable molybdopterin binding domain DP_RS04370 PF00672 HAMP domain DP_RS04370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS04370 PF17200 Single Cache domain 2 DP_RS04400 PF00205 Thiamine pyrophosphate enzyme, central domain DP_RS04400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DP_RS04400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DP_RS04405 PF12801 4Fe-4S binding domain DP_RS04415 PF01063 Amino-transferase class IV DP_RS04420 PF00425 chorismate binding enzyme DP_RS04425 PF00117 Glutamine amidotransferase class-I DP_RS04445 PF13361 UvrD-like helicase C-terminal domain DP_RS04445 PF00580 UvrD/REP helicase N-terminal domain DP_RS04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS04450 PF00072 Response regulator receiver domain DP_RS04450 PF00497 Bacterial extracellular solute-binding proteins, family 3 DP_RS04450 PF00512 His Kinase A (phospho-acceptor) domain DP_RS04450 PF01627 Hpt domain DP_RS04450 PF00989 PAS fold DP_RS04455 PF00072 Response regulator receiver domain DP_RS04460 PF01230 HIT domain DP_RS04465 PF07724 AAA domain (Cdc48 subfamily) DP_RS04465 PF10431 C-terminal, D2-small domain, of ClpB protein DP_RS04465 PF00004 ATPase family associated with various cellular activities (AAA) DP_RS04465 PF02861 Clp amino terminal domain, pathogenicity island component DP_RS04465 PF17871 AAA lid domain DP_RS04470 PF02617 ATP-dependent Clp protease adaptor protein ClpS DP_RS04480 PF00291 Pyridoxal-phosphate dependent enzyme DP_RS04480 PF00585 C-terminal regulatory domain of Threonine dehydratase DP_RS04485 PF02659 Putative manganese efflux pump DP_RS04495 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DP_RS04495 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DP_RS04495 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DP_RS04500 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DP_RS04500 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS04500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DP_RS04510 PF00437 Type II/IV secretion system protein DP_RS04520 PF00270 DEAD/DEAH box helicase DP_RS04520 PF00271 Helicase conserved C-terminal domain DP_RS04525 PF00575 S1 RNA binding domain DP_RS04530 PF00216 Bacterial DNA-binding protein DP_RS04535 PF01300 Telomere recombination DP_RS04540 PF00478 IMP dehydrogenase / GMP reductase domain DP_RS04540 PF00571 CBS domain DP_RS04545 PF02540 NAD synthase DP_RS04545 PF00117 Glutamine amidotransferase class-I DP_RS04545 PF00958 GMP synthase C terminal domain DP_RS04555 PF00924 Mechanosensitive ion channel DP_RS04555 PF05552 Conserved TM helix DP_RS04570 PF02699 Preprotein translocase subunit DP_RS04575 PF00075 RNase H DP_RS04590 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DP_RS04590 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DP_RS04590 PF06827 Zinc finger found in FPG and IleRS DP_RS04610 PF08543 Phosphomethylpyrimidine kinase DP_RS04625 PF13520 Amino acid permease DP_RS04630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DP_RS04630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DP_RS04640 PF01040 UbiA prenyltransferase family DP_RS04655 PF02322 Cytochrome bd terminal oxidase subunit II DP_RS04660 PF01654 Cytochrome bd terminal oxidase subunit I DP_RS04670 PF00543 Nitrogen regulatory protein P-II DP_RS04675 PF08335 GlnD PII-uridylyltransferase DP_RS04675 PF01966 HD domain DP_RS04675 PF01909 Nucleotidyltransferase domain DP_RS04680 PF00120 Glutamine synthetase, catalytic domain DP_RS04680 PF03951 Glutamine synthetase, beta-Grasp domain DP_RS04685 PF00916 Sulfate permease family DP_RS04685 PF01740 STAS domain DP_RS04705 PF00313 'Cold-shock' DNA-binding domain DP_RS04710 PF09962 Uncharacterized conserved protein (DUF2196) DP_RS04715 PF00313 'Cold-shock' DNA-binding domain DP_RS04720 PF00270 DEAD/DEAH box helicase DP_RS04720 PF00271 Helicase conserved C-terminal domain DP_RS04725 PF00484 Carbonic anhydrase DP_RS04765 PF00085 Thioredoxin DP_RS04775 PF00465 Iron-containing alcohol dehydrogenase DP_RS04780 PF00465 Iron-containing alcohol dehydrogenase DP_RS04785 PF00465 Iron-containing alcohol dehydrogenase DP_RS04790 PF00072 Response regulator receiver domain DP_RS04790 PF02954 Bacterial regulatory protein, Fis family DP_RS04790 PF00158 Sigma-54 interaction domain DP_RS04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS04795 PF00512 His Kinase A (phospho-acceptor) domain DP_RS04795 PF00989 PAS fold DP_RS04795 PF08447 PAS fold DP_RS04800 PF00465 Iron-containing alcohol dehydrogenase DP_RS04805 PF03222 Tryptophan/tyrosine permease family DP_RS04815 PF07670 Nucleoside recognition DP_RS04815 PF02421 Ferrous iron transport protein B DP_RS04815 PF17910 FeoB cytosolic helical domain DP_RS04815 PF07664 Ferrous iron transport protein B C terminus DP_RS04835 PF00313 'Cold-shock' DNA-binding domain DP_RS04855 PF02028 BCCT, betaine/carnitine/choline family transporter DP_RS04870 PF01740 STAS domain DP_RS04870 PF00916 Sulfate permease family DP_RS04880 PF00586 AIR synthase related protein, N-terminal domain DP_RS04880 PF02769 AIR synthase related protein, C-terminal domain DP_RS04890 PF00990 Diguanylate cyclase, GGDEF domain DP_RS04890 PF00072 Response regulator receiver domain DP_RS04895 PF02386 Cation transport protein DP_RS04900 PF02080 TrkA-C domain DP_RS04900 PF02254 TrkA-N domain DP_RS04910 PF06826 Predicted Permease Membrane Region DP_RS04910 PF02080 TrkA-C domain DP_RS04915 PF02743 Cache domain DP_RS04915 PF00672 HAMP domain DP_RS04915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS04940 PF03976 Polyphosphate kinase 2 (PPK2) DP_RS04945 PF00689 Cation transporting ATPase, C-terminus DP_RS04945 PF00690 Cation transporter/ATPase, N-terminus DP_RS04955 PF02743 Cache domain DP_RS04955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS04955 PF00672 HAMP domain DP_RS04970 PF00005 ABC transporter DP_RS04975 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS04980 PF00497 Bacterial extracellular solute-binding proteins, family 3 DP_RS04995 PF00710 Asparaginase, N-terminal DP_RS04995 PF17763 Glutaminase/Asparaginase C-terminal domain DP_RS05000 PF12419 SNF2 Helicase protein DP_RS05000 PF00271 Helicase conserved C-terminal domain DP_RS05000 PF00176 SNF2 family N-terminal domain DP_RS05010 PF04358 DsrC like protein DP_RS05025 PF12848 ABC transporter DP_RS05025 PF00005 ABC transporter DP_RS05025 PF16326 ABC transporter C-terminal domain DP_RS05035 PF03793 PASTA domain DP_RS05035 PF00069 Protein kinase domain DP_RS05040 PF01212 Beta-eliminating lyase DP_RS05055 PF01653 NAD-dependent DNA ligase adenylation domain DP_RS05055 PF03120 NAD-dependent DNA ligase OB-fold domain DP_RS05055 PF00533 BRCA1 C Terminus (BRCT) domain DP_RS05060 PF01361 Tautomerase enzyme DP_RS05065 PF16363 GDP-mannose 4,6 dehydratase DP_RS05080 PF02754 Cysteine-rich domain DP_RS05085 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS05085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DP_RS05090 PF01593 Flavin containing amine oxidoreductase DP_RS05100 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DP_RS05100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DP_RS05105 PF00374 Nickel-dependent hydrogenase DP_RS05110 PF01924 Hydrogenase formation hypA family DP_RS05130 PF00132 Bacterial transferase hexapeptide (six repeats) DP_RS05135 PF11870 Domain of unknown function (DUF3390) DP_RS05135 PF13183 4Fe-4S dicluster domain DP_RS05135 PF02589 LUD domain DP_RS05140 PF02589 LUD domain DP_RS05150 PF02913 FAD linked oxidases, C-terminal domain DP_RS05150 PF01565 FAD binding domain DP_RS05155 PF02652 L-lactate permease DP_RS05160 PF00072 Response regulator receiver domain DP_RS05160 PF00158 Sigma-54 interaction domain DP_RS05160 PF02954 Bacterial regulatory protein, Fis family DP_RS05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS05165 PF00072 Response regulator receiver domain DP_RS05165 PF00512 His Kinase A (phospho-acceptor) domain DP_RS05165 PF08448 PAS fold DP_RS05165 PF13188 PAS domain DP_RS05180 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS05185 PF00005 ABC transporter DP_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS05195 PF00497 Bacterial extracellular solute-binding proteins, family 3 DP_RS05200 PF01810 LysE type translocator DP_RS05205 PF00004 ATPase family associated with various cellular activities (AAA) DP_RS05205 PF16193 AAA C-terminal domain DP_RS05205 PF12002 MgsA AAA+ ATPase C terminal DP_RS05215 PF00465 Iron-containing alcohol dehydrogenase DP_RS05220 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DP_RS05240 PF00072 Response regulator receiver domain DP_RS05240 PF00158 Sigma-54 interaction domain DP_RS05240 PF02954 Bacterial regulatory protein, Fis family DP_RS05245 PF00512 His Kinase A (phospho-acceptor) domain DP_RS05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS05250 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DP_RS05255 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DP_RS05255 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DP_RS05260 PF00361 Proton-conducting membrane transporter DP_RS05260 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DP_RS05270 PF00146 NADH dehydrogenase DP_RS05275 PF00361 Proton-conducting membrane transporter DP_RS05330 PF02685 Glucokinase DP_RS05360 PF05951 Bacterial protein of unknown function (DUF882) DP_RS05365 PF01219 Prokaryotic diacylglycerol kinase DP_RS05435 PF03717 Penicillin-binding Protein dimerisation domain DP_RS05435 PF00905 Penicillin binding protein transpeptidase domain DP_RS05440 PF01098 Cell cycle protein DP_RS05445 PF00762 Ferrochelatase DP_RS05455 PF01367 5'-3' exonuclease, C-terminal SAM fold DP_RS05455 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DP_RS05455 PF01612 3'-5' exonuclease DP_RS05455 PF00476 DNA polymerase family A DP_RS05460 PF00285 Citrate synthase, C-terminal domain DP_RS05465 PF02581 Thiamine monophosphate synthase DP_RS05475 PF01145 SPFH domain / Band 7 family DP_RS05480 PF01145 SPFH domain / Band 7 family DP_RS05485 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DP_RS05485 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DP_RS05495 PF06574 FAD synthetase DP_RS05495 PF01687 Riboflavin kinase DP_RS05515 PF00677 Lumazine binding domain DP_RS05520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DP_RS05520 PF00925 GTP cyclohydrolase II DP_RS05525 PF00885 6,7-dimethyl-8-ribityllumazine synthase DP_RS05530 PF01029 NusB family DP_RS05535 PF09397 Ftsk gamma domain DP_RS05535 PF01580 FtsK/SpoIIIE family DP_RS05535 PF17854 FtsK alpha domain DP_RS05540 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit DP_RS05540 PF13187 4Fe-4S dicluster domain DP_RS05545 PF00890 FAD binding domain DP_RS05550 PF01593 Flavin containing amine oxidoreductase DP_RS05555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DP_RS05555 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS05585 PF00009 Elongation factor Tu GTP binding domain DP_RS05585 PF03144 Elongation factor Tu domain 2 DP_RS05585 PF03143 Elongation factor Tu C-terminal domain DP_RS05605 PF00467 KOW motif DP_RS05605 PF02357 Transcription termination factor nusG DP_RS05610 PF03946 Ribosomal protein L11, N-terminal domain DP_RS05610 PF00298 Ribosomal protein L11, RNA binding domain DP_RS05615 PF00687 Ribosomal protein L1p/L10e family DP_RS05620 PF00466 Ribosomal protein L10 DP_RS05625 PF16320 Ribosomal protein L7/L12 dimerisation domain DP_RS05625 PF00542 Ribosomal protein L7/L12 C-terminal domain DP_RS05630 PF04560 RNA polymerase Rpb2, domain 7 DP_RS05630 PF10385 RNA polymerase beta subunit external 1 domain DP_RS05630 PF04565 RNA polymerase Rpb2, domain 3 DP_RS05630 PF04561 RNA polymerase Rpb2, domain 2 DP_RS05630 PF00562 RNA polymerase Rpb2, domain 6 DP_RS05630 PF04563 RNA polymerase beta subunit DP_RS05635 PF04997 RNA polymerase Rpb1, domain 1 DP_RS05635 PF05000 RNA polymerase Rpb1, domain 4 DP_RS05635 PF04983 RNA polymerase Rpb1, domain 3 DP_RS05635 PF00623 RNA polymerase Rpb1, domain 2 DP_RS05635 PF04998 RNA polymerase Rpb1, domain 5 DP_RS05640 PF00164 Ribosomal protein S12/S23 DP_RS05645 PF00177 Ribosomal protein S7p/S5e DP_RS05650 PF03764 Elongation factor G, domain IV DP_RS05650 PF00679 Elongation factor G C-terminus DP_RS05650 PF00009 Elongation factor Tu GTP binding domain DP_RS05650 PF14492 Elongation Factor G, domain II DP_RS05650 PF03144 Elongation factor Tu domain 2 DP_RS05655 PF03143 Elongation factor Tu C-terminal domain DP_RS05655 PF03144 Elongation factor Tu domain 2 DP_RS05655 PF00009 Elongation factor Tu GTP binding domain DP_RS05660 PF00338 Ribosomal protein S10p/S20e DP_RS05665 PF00297 Ribosomal protein L3 DP_RS05670 PF00573 Ribosomal protein L4/L1 family DP_RS05675 PF00276 Ribosomal protein L23 DP_RS05680 PF00181 Ribosomal Proteins L2, RNA binding domain DP_RS05680 PF03947 Ribosomal Proteins L2, C-terminal domain DP_RS05685 PF00203 Ribosomal protein S19 DP_RS05690 PF00237 Ribosomal protein L22p/L17e DP_RS05695 PF07650 KH domain DP_RS05695 PF00189 Ribosomal protein S3, C-terminal domain DP_RS05700 PF00252 Ribosomal protein L16p/L10e DP_RS05705 PF00831 Ribosomal L29 protein DP_RS05710 PF00366 Ribosomal protein S17 DP_RS05715 PF00238 Ribosomal protein L14p/L23e DP_RS05720 PF00467 KOW motif DP_RS05720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DP_RS05725 PF00673 ribosomal L5P family C-terminus DP_RS05725 PF00281 Ribosomal protein L5 DP_RS05730 PF00253 Ribosomal protein S14p/S29e DP_RS05745 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DP_RS05750 PF00333 Ribosomal protein S5, N-terminal domain DP_RS05750 PF03719 Ribosomal protein S5, C-terminal domain DP_RS05755 PF00327 Ribosomal protein L30p/L7e DP_RS05760 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DP_RS05765 PF00344 SecY translocase DP_RS05770 PF00557 Metallopeptidase family M24 DP_RS05775 PF01176 Translation initiation factor 1A / IF-1 DP_RS05780 PF00416 Ribosomal protein S13/S18 DP_RS05785 PF00411 Ribosomal protein S11 DP_RS05790 PF01479 S4 domain DP_RS05790 PF00163 Ribosomal protein S4/S9 N-terminal domain DP_RS05795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DP_RS05795 PF01000 RNA polymerase Rpb3/RpoA insert domain DP_RS05795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DP_RS05800 PF01196 Ribosomal protein L17 DP_RS05805 PF00318 Ribosomal protein S2 DP_RS05810 PF00318 Ribosomal protein S2 DP_RS05815 PF00889 Elongation factor TS DP_RS05820 PF00696 Amino acid kinase family DP_RS05825 PF01765 Ribosome recycling factor DP_RS05830 PF01255 Putative undecaprenyl diphosphate synthase DP_RS05840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DP_RS05840 PF13288 DXP reductoisomerase C-terminal domain DP_RS05840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DP_RS05845 PF17820 PDZ domain DP_RS05845 PF02163 Peptidase family M50 DP_RS05850 PF00814 Glycoprotease family DP_RS05855 PF04551 GcpE protein DP_RS05860 PF04073 Aminoacyl-tRNA editing domain DP_RS05860 PF03129 Anticodon binding domain DP_RS05860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DP_RS05865 PF02824 TGS domain DP_RS05865 PF04607 Region found in RelA / SpoT proteins DP_RS05865 PF13291 ACT domain DP_RS05875 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DP_RS05875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DP_RS05885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DP_RS05925 PF12728 Helix-turn-helix domain DP_RS05925 PF02661 Fic/DOC family DP_RS05940 PF00005 ABC transporter DP_RS05940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DP_RS05945 PF00005 ABC transporter DP_RS05945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DP_RS05950 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS05965 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DP_RS05995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS06000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DP_RS06005 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS06045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DP_RS06045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DP_RS06055 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DP_RS06055 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DP_RS06060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DP_RS06065 PF13193 AMP-binding enzyme C-terminal domain DP_RS06065 PF00501 AMP-binding enzyme DP_RS06075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DP_RS06080 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS06085 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS06085 PF12911 N-terminal TM domain of oligopeptide transport permease C DP_RS06090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DP_RS06090 PF00005 ABC transporter DP_RS06115 PF04542 Sigma-70 region 2 DP_RS06115 PF04539 Sigma-70 region 3 DP_RS06115 PF04545 Sigma-70, region 4 DP_RS06175 PF03063 Prismane/CO dehydrogenase family DP_RS06185 PF03063 Prismane/CO dehydrogenase family DP_RS06190 PF01625 Peptide methionine sulfoxide reductase DP_RS06190 PF01641 SelR domain DP_RS06195 PF00999 Sodium/hydrogen exchanger family DP_RS06200 PF00005 ABC transporter DP_RS06205 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS06210 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS06215 PF12849 PBP superfamily domain DP_RS06220 PF08443 RimK-like ATP-grasp domain DP_RS06220 PF18419 ATP-grasp-like domain DP_RS06220 PF04262 Glutamate-cysteine ligase DP_RS06225 PF01594 AI-2E family transporter DP_RS06230 PF00005 ABC transporter DP_RS06235 PF00497 Bacterial extracellular solute-binding proteins, family 3 DP_RS06255 PF00005 ABC transporter DP_RS06255 PF03466 LysR substrate binding domain DP_RS06260 PF00291 Pyridoxal-phosphate dependent enzyme DP_RS06270 PF07021 Methionine biosynthesis protein MetW DP_RS06270 PF00561 alpha/beta hydrolase fold DP_RS06275 PF00561 alpha/beta hydrolase fold DP_RS06290 PF00035 Double-stranded RNA binding motif DP_RS06290 PF14622 Ribonuclease-III-like DP_RS06300 PF00005 ABC transporter DP_RS06300 PF12848 ABC transporter DP_RS06300 PF16326 ABC transporter C-terminal domain DP_RS06320 PF13614 AAA domain DP_RS06345 PF08338 Domain of unknown function (DUF1731) DP_RS06345 PF01370 NAD dependent epimerase/dehydratase family DP_RS06350 PF00512 His Kinase A (phospho-acceptor) domain DP_RS06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS06350 PF08448 PAS fold DP_RS06350 PF00072 Response regulator receiver domain DP_RS06350 PF13188 PAS domain DP_RS06360 PF01037 Lrp/AsnC ligand binding domain DP_RS06370 PF02915 Rubrerythrin DP_RS06375 PF01810 LysE type translocator DP_RS06380 PF00520 Ion transport protein DP_RS06380 PF00027 Cyclic nucleotide-binding domain DP_RS06385 PF00571 CBS domain DP_RS06385 PF01743 Poly A polymerase head domain DP_RS06400 PF00501 AMP-binding enzyme DP_RS06400 PF14535 AMP-binding enzyme C-terminal domain DP_RS06410 PF02653 Branched-chain amino acid transport system / permease component DP_RS06415 PF11862 Domain of unknown function (DUF3382) DP_RS06415 PF02653 Branched-chain amino acid transport system / permease component DP_RS06420 PF00005 ABC transporter DP_RS06420 PF12399 Branched-chain amino acid ATP-binding cassette transporter DP_RS06425 PF00005 ABC transporter DP_RS06430 PF14535 AMP-binding enzyme C-terminal domain DP_RS06430 PF00501 AMP-binding enzyme DP_RS06435 PF03725 3' exoribonuclease family, domain 2 DP_RS06435 PF01138 3' exoribonuclease family, domain 1 DP_RS06440 PF01235 Sodium:alanine symporter family DP_RS06445 PF01235 Sodium:alanine symporter family DP_RS06450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS06450 PF00672 HAMP domain DP_RS06450 PF02743 Cache domain DP_RS06455 PF02554 Carbon starvation protein CstA DP_RS06465 PF01208 Uroporphyrinogen decarboxylase (URO-D) DP_RS06470 PF13186 Iron-sulfur cluster-binding domain DP_RS06470 PF04055 Radical SAM superfamily DP_RS06475 PF00815 Histidinol dehydrogenase DP_RS06480 PF02527 rRNA small subunit methyltransferase G DP_RS06485 PF00180 Isocitrate/isopropylmalate dehydrogenase DP_RS06490 PF00158 Sigma-54 interaction domain DP_RS06490 PF06505 Activator of aromatic catabolism DP_RS06490 PF02830 V4R domain DP_RS06490 PF02954 Bacterial regulatory protein, Fis family DP_RS06495 PF01235 Sodium:alanine symporter family DP_RS06500 PF02678 Pirin DP_RS06500 PF05726 Pirin C-terminal cupin domain DP_RS06510 PF05971 RNA methyltransferase DP_RS06515 PF07152 YaeQ protein DP_RS06555 PF01235 Sodium:alanine symporter family DP_RS06585 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DP_RS06630 PF16491 CAAX prenyl protease N-terminal, five membrane helices DP_RS06630 PF01435 Peptidase family M48 DP_RS06635 PF00361 Proton-conducting membrane transporter DP_RS06645 PF00361 Proton-conducting membrane transporter DP_RS06655 PF00361 Proton-conducting membrane transporter DP_RS06660 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DP_RS06665 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DP_RS06670 PF12838 4Fe-4S dicluster domain DP_RS06675 PF00146 NADH dehydrogenase DP_RS06680 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DP_RS06685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DP_RS06690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DP_RS06695 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DP_RS06705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DP_RS06705 PF03466 LysR substrate binding domain DP_RS06710 PF01416 tRNA pseudouridine synthase DP_RS06715 PF01118 Semialdehyde dehydrogenase, NAD binding domain DP_RS06715 PF02774 Semialdehyde dehydrogenase, dimerisation domain DP_RS06720 PF00380 Ribosomal protein S9/S16 DP_RS06725 PF00572 Ribosomal protein L13 DP_RS06735 PF00475 Imidazoleglycerol-phosphate dehydratase DP_RS06745 PF01171 PP-loop family DP_RS06750 PF01336 OB-fold nucleic acid binding domain DP_RS06750 PF00152 tRNA synthetases class II (D, K and N) DP_RS06755 PF01209 ubiE/COQ5 methyltransferase family DP_RS06760 PF00501 AMP-binding enzyme DP_RS06795 PF00582 Universal stress protein family DP_RS06800 PF04073 Aminoacyl-tRNA editing domain DP_RS06815 PF17946 RecC C-terminal domain DP_RS06820 PF12705 PD-(D/E)XK nuclease superfamily DP_RS06820 PF13361 UvrD-like helicase C-terminal domain DP_RS06820 PF00580 UvrD/REP helicase N-terminal domain DP_RS06825 PF13538 UvrD-like helicase C-terminal domain DP_RS06830 PF00892 EamA-like transporter family DP_RS06835 PF00892 EamA-like transporter family DP_RS06865 PF00005 ABC transporter DP_RS06865 PF08402 TOBE domain DP_RS06895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS06905 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS06930 PF00005 ABC transporter DP_RS06935 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS06945 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DP_RS06960 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DP_RS06960 PF02896 PEP-utilising enzyme, TIM barrel domain DP_RS06960 PF00391 PEP-utilising enzyme, mobile domain DP_RS06965 PF03618 Kinase/pyrophosphorylase DP_RS06970 PF02626 Carboxyltransferase domain, subdomain A and B DP_RS06975 PF02682 Carboxyltransferase domain, subdomain C and D DP_RS06980 PF03746 LamB/YcsF family DP_RS06985 PF01979 Amidohydrolase family DP_RS06985 PF13382 Adenine deaminase C-terminal domain DP_RS06990 PF01979 Amidohydrolase family DP_RS06990 PF13382 Adenine deaminase C-terminal domain DP_RS07000 PF08000 Bacterial PH domain DP_RS07005 PF13536 Putative multidrug resistance efflux transporter DP_RS07020 PF00465 Iron-containing alcohol dehydrogenase DP_RS07025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DP_RS07035 PF03193 RsgA GTPase DP_RS07040 PF01042 Endoribonuclease L-PSP DP_RS07045 PF01546 Peptidase family M20/M25/M40 DP_RS07045 PF07687 Peptidase dimerisation domain DP_RS07050 PF02028 BCCT, betaine/carnitine/choline family transporter DP_RS07060 PF00291 Pyridoxal-phosphate dependent enzyme DP_RS07065 PF00158 Sigma-54 interaction domain DP_RS07065 PF13188 PAS domain DP_RS07065 PF02954 Bacterial regulatory protein, Fis family DP_RS07075 PF00491 Arginase family DP_RS07080 PF02028 BCCT, betaine/carnitine/choline family transporter DP_RS07090 PF08402 TOBE domain DP_RS07090 PF00005 ABC transporter DP_RS07105 PF05525 Branched-chain amino acid transport protein DP_RS07110 PF02001 Protein of unknown function DUF134 DP_RS07130 PF00072 Response regulator receiver domain DP_RS07155 PF04607 Region found in RelA / SpoT proteins DP_RS07155 PF02824 TGS domain DP_RS07155 PF13291 ACT domain DP_RS07165 PF07228 Stage II sporulation protein E (SpoIIE) DP_RS07165 PF00672 HAMP domain DP_RS07170 PF00561 alpha/beta hydrolase fold DP_RS07185 PF00860 Permease family DP_RS07190 PF00271 Helicase conserved C-terminal domain DP_RS07190 PF00270 DEAD/DEAH box helicase DP_RS07240 PF00216 Bacterial DNA-binding protein DP_RS07245 PF03147 Ferredoxin-fold anticodon binding domain DP_RS07245 PF01588 Putative tRNA binding domain DP_RS07245 PF03484 tRNA synthetase B5 domain DP_RS07245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DP_RS07245 PF03483 B3/4 domain DP_RS07250 PF01409 tRNA synthetases class II core domain (F) DP_RS07250 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DP_RS07255 PF00453 Ribosomal protein L20 DP_RS07260 PF01632 Ribosomal protein L35 DP_RS07265 PF00707 Translation initiation factor IF-3, C-terminal domain DP_RS07265 PF05198 Translation initiation factor IF-3, N-terminal domain DP_RS07270 PF02824 TGS domain DP_RS07270 PF03129 Anticodon binding domain DP_RS07270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DP_RS07270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DP_RS07280 PF02575 YbaB/EbfC DNA-binding family DP_RS07285 PF12169 DNA polymerase III subunits gamma and tau domain III DP_RS07290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DP_RS07290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DP_RS07300 PF00497 Bacterial extracellular solute-binding proteins, family 3 DP_RS07310 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS07315 PF00005 ABC transporter DP_RS07325 PF14437 MafB19-like deaminase DP_RS07340 PF03600 Citrate transporter DP_RS07340 PF02080 TrkA-C domain DP_RS07345 PF08439 Oligopeptidase F DP_RS07345 PF01432 Peptidase family M3 DP_RS07350 PF05958 tRNA (Uracil-5-)-methyltransferase DP_RS07350 PF01938 TRAM domain DP_RS07355 PF01103 Surface antigen DP_RS07355 PF07244 Surface antigen variable number repeat DP_RS07355 PF17243 POTRA domain TamA domain 1 DP_RS07365 PF02954 Bacterial regulatory protein, Fis family DP_RS07365 PF00158 Sigma-54 interaction domain DP_RS07365 PF00072 Response regulator receiver domain DP_RS07370 PF00155 Aminotransferase class I and II DP_RS07385 PF00114 Pilin (bacterial filament) DP_RS07385 PF07963 Prokaryotic N-terminal methylation motif DP_RS07390 PF07963 Prokaryotic N-terminal methylation motif DP_RS07390 PF00114 Pilin (bacterial filament) DP_RS07395 PF00114 Pilin (bacterial filament) DP_RS07395 PF07963 Prokaryotic N-terminal methylation motif DP_RS07425 PF05567 Neisseria PilC beta-propeller domain DP_RS07435 PF07963 Prokaryotic N-terminal methylation motif DP_RS07435 PF00114 Pilin (bacterial filament) DP_RS07455 PF00114 Pilin (bacterial filament) DP_RS07455 PF07963 Prokaryotic N-terminal methylation motif DP_RS07460 PF05567 Neisseria PilC beta-propeller domain DP_RS07460 PF05567 Neisseria PilC beta-propeller domain DP_RS07470 PF00403 Heavy-metal-associated domain DP_RS07475 PF01747 ATP-sulfurylase DP_RS07475 PF14306 PUA-like domain DP_RS07495 PF14437 MafB19-like deaminase DP_RS07505 PF00902 Sec-independent protein translocase protein (TatC) DP_RS07510 PF02416 mttA/Hcf106 family DP_RS07515 PF00709 Adenylosuccinate synthetase DP_RS07520 PF01192 RNA polymerase Rpb6 DP_RS07525 PF01556 DnaJ C terminal domain DP_RS07525 PF00684 DnaJ central domain DP_RS07525 PF00226 DnaJ domain DP_RS07530 PF01967 MoaC family DP_RS07535 PF01258 Prokaryotic dksA/traR C4-type zinc finger DP_RS07540 PF02649 Type I GTP cyclohydrolase folE2 DP_RS07545 PF05746 DALR anticodon binding domain DP_RS07545 PF02092 Glycyl-tRNA synthetase beta subunit DP_RS07555 PF00158 Sigma-54 interaction domain DP_RS07555 PF02954 Bacterial regulatory protein, Fis family DP_RS07555 PF00072 Response regulator receiver domain DP_RS07570 PF00158 Sigma-54 interaction domain DP_RS07570 PF00072 Response regulator receiver domain DP_RS07575 PF00072 Response regulator receiver domain DP_RS07590 PF00860 Permease family DP_RS07600 PF01047 MarR family DP_RS07610 PF07690 Major Facilitator Superfamily DP_RS07625 PF01042 Endoribonuclease L-PSP DP_RS07630 PF00291 Pyridoxal-phosphate dependent enzyme DP_RS07635 PF00375 Sodium:dicarboxylate symporter family DP_RS07645 PF01042 Endoribonuclease L-PSP DP_RS07650 PF00291 Pyridoxal-phosphate dependent enzyme DP_RS07655 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS07660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DP_RS07665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS07665 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DP_RS07685 PF00156 Phosphoribosyl transferase domain DP_RS07705 PF08479 POTRA domain, ShlB-type DP_RS07705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DP_RS07705 PF17287 POTRA domain DP_RS07710 PF17287 POTRA domain DP_RS07710 PF08479 POTRA domain, ShlB-type DP_RS07710 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DP_RS07750 PF00437 Type II/IV secretion system protein DP_RS07775 PF13629 Pilus formation protein N terminal region DP_RS07775 PF00263 Bacterial type II and III secretion system protein DP_RS07775 PF04972 BON domain DP_RS07815 PF00005 ABC transporter DP_RS07820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DP_RS07845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DP_RS07845 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS07850 PF00795 Carbon-nitrogen hydrolase DP_RS07855 PF00072 Response regulator receiver domain DP_RS07855 PF00990 Diguanylate cyclase, GGDEF domain DP_RS07865 PF00072 Response regulator receiver domain DP_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS08130 PF02899 Phage integrase, N-terminal SAM-like domain DP_RS08130 PF00589 Phage integrase family DP_RS08140 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DP_RS08145 PF02562 PhoH-like protein DP_RS08170 PF00155 Aminotransferase class I and II DP_RS08175 PF02649 Type I GTP cyclohydrolase folE2 DP_RS08180 PF02219 Methylenetetrahydrofolate reductase DP_RS08185 PF01479 S4 domain DP_RS08190 PF02142 MGS-like domain DP_RS08190 PF01808 AICARFT/IMPCHase bienzyme DP_RS08195 PF00551 Formyl transferase DP_RS08200 PF00156 Phosphoribosyl transferase domain DP_RS08210 PF01649 Ribosomal protein S20 DP_RS08215 PF00425 chorismate binding enzyme DP_RS08215 PF04715 Anthranilate synthase component I, N terminal region DP_RS08220 PF00117 Glutamine amidotransferase class-I DP_RS08225 PF00591 Glycosyl transferase family, a/b domain DP_RS08225 PF02885 Glycosyl transferase family, helical bundle domain DP_RS08230 PF00218 Indole-3-glycerol phosphate synthase DP_RS08235 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DP_RS08260 PF00005 ABC transporter DP_RS08265 PF12704 MacB-like periplasmic core domain DP_RS08270 PF00152 tRNA synthetases class II (D, K and N) DP_RS08270 PF01336 OB-fold nucleic acid binding domain DP_RS08275 PF00290 Tryptophan synthase alpha chain DP_RS08280 PF00291 Pyridoxal-phosphate dependent enzyme DP_RS08285 PF02623 FliW protein DP_RS08295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DP_RS08300 PF14883 Hypothetical glycosyl hydrolase family 13 DP_RS08300 PF01522 Polysaccharide deacetylase DP_RS08315 PF00535 Glycosyl transferase family 2 DP_RS08325 PF02457 DisA bacterial checkpoint controller nucleotide-binding DP_RS08335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DP_RS08335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DP_RS08335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DP_RS08335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DP_RS08340 PF01025 GrpE DP_RS08345 PF00012 Hsp70 protein DP_RS08350 PF00579 tRNA synthetases class I (W and Y) DP_RS08355 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DP_RS08360 PF00258 Flavodoxin DP_RS08360 PF00753 Metallo-beta-lactamase superfamily DP_RS08365 PF00753 Metallo-beta-lactamase superfamily DP_RS08365 PF00258 Flavodoxin DP_RS08380 PF09335 SNARE associated Golgi protein DP_RS08390 PF13847 Methyltransferase domain DP_RS08405 PF02915 Rubrerythrin DP_RS08415 PF02561 Flagellar protein FliS DP_RS08420 PF07195 Flagellar hook-associated protein 2 C-terminus DP_RS08420 PF02465 Flagellar hook-associated protein 2 N-terminus DP_RS08430 PF00669 Bacterial flagellin N-terminal helical region DP_RS08430 PF00669 Bacterial flagellin N-terminal helical region DP_RS08430 PF00700 Bacterial flagellin C-terminal helical region DP_RS08430 PF00700 Bacterial flagellin C-terminal helical region DP_RS08440 PF07733 Bacterial DNA polymerase III alpha NTPase domain DP_RS08440 PF14579 Helix-hairpin-helix motif DP_RS08440 PF02811 PHP domain DP_RS08440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DP_RS08450 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DP_RS08450 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DP_RS08455 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DP_RS08460 PF06874 Firmicute fructose-1,6-bisphosphatase DP_RS08470 PF01880 Desulfoferrodoxin DP_RS08470 PF06397 Desulfoferrodoxin, N-terminal domain DP_RS08480 PF00210 Ferritin-like domain DP_RS08490 PF01435 Peptidase family M48 DP_RS08495 PF01027 Inhibitor of apoptosis-promoting Bax1 DP_RS08500 PF02441 Flavoprotein DP_RS08500 PF04127 DNA / pantothenate metabolism flavoprotein DP_RS08510 PF00912 Transglycosylase DP_RS08510 PF00905 Penicillin binding protein transpeptidase domain DP_RS08520 PF01476 LysM domain DP_RS08520 PF01464 Transglycosylase SLT domain DP_RS08530 PF01985 CRS1 / YhbY (CRM) domain DP_RS08540 PF00877 NlpC/P60 family DP_RS08545 PF01578 Cytochrome C assembly protein DP_RS08550 PF05140 ResB-like family DP_RS08555 PF00830 Ribosomal L28 family DP_RS08565 PF00899 ThiF family DP_RS08575 PF01810 LysE type translocator DP_RS08580 PF00575 S1 RNA binding domain DP_RS08580 PF17876 Cold shock domain DP_RS08580 PF08206 Ribonuclease B OB domain DP_RS08580 PF00773 RNB domain DP_RS08585 PF07650 KH domain DP_RS08585 PF01926 50S ribosome-binding GTPase DP_RS08595 PF00271 Helicase conserved C-terminal domain DP_RS08595 PF00270 DEAD/DEAH box helicase DP_RS08600 PF03841 L-seryl-tRNA selenium transferase DP_RS08610 PF03641 Possible lysine decarboxylase DP_RS08615 PF00437 Type II/IV secretion system protein DP_RS08625 PF02321 Outer membrane efflux protein DP_RS08630 PF00873 AcrB/AcrD/AcrF family DP_RS08635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DP_RS08635 PF00529 HlyD membrane-fusion protein of T1SS DP_RS08640 PF00440 Bacterial regulatory proteins, tetR family DP_RS08645 PF01053 Cys/Met metabolism PLP-dependent enzyme DP_RS08655 PF03553 Na+/H+ antiporter family DP_RS08660 PF00226 DnaJ domain DP_RS08660 PF01556 DnaJ C terminal domain DP_RS08665 PF13567 Domain of unknown function (DUF4131) DP_RS08665 PF00753 Metallo-beta-lactamase superfamily DP_RS08665 PF03772 Competence protein DP_RS08670 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DP_RS08670 PF00534 Glycosyl transferases group 1 DP_RS08675 PF04452 RNA methyltransferase DP_RS08685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DP_RS08685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DP_RS08685 PF01842 ACT domain DP_RS08690 PF04015 Domain of unknown function (DUF362) DP_RS08695 PF02545 Maf-like protein DP_RS08720 PF01527 Transposase DP_RS08725 PF13333 Integrase core domain DP_RS08725 PF00665 Integrase core domain DP_RS08725 PF13276 HTH-like domain DP_RS08755 PF00132 Bacterial transferase hexapeptide (six repeats) DP_RS08765 PF02028 BCCT, betaine/carnitine/choline family transporter DP_RS08770 PF12804 MobA-like NTP transferase domain DP_RS08780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DP_RS08780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DP_RS08780 PF01799 [2Fe-2S] binding domain DP_RS08785 PF01799 [2Fe-2S] binding domain DP_RS08785 PF00111 2Fe-2S iron-sulfur cluster binding domain DP_RS08815 PF03061 Thioesterase superfamily DP_RS08820 PF01676 Metalloenzyme superfamily DP_RS08820 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DP_RS08825 PF00742 Homoserine dehydrogenase DP_RS08825 PF01842 ACT domain DP_RS08825 PF03447 Homoserine dehydrogenase, NAD binding domain DP_RS08835 PF02602 Uroporphyrinogen-III synthase HemD DP_RS08835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DP_RS08840 PF00501 AMP-binding enzyme DP_RS08840 PF13193 AMP-binding enzyme C-terminal domain DP_RS08855 PF00483 Nucleotidyl transferase DP_RS08855 PF00132 Bacterial transferase hexapeptide (six repeats) DP_RS08865 PF05690 Thiazole biosynthesis protein ThiG DP_RS08870 PF06968 Biotin and Thiamin Synthesis associated domain DP_RS08870 PF04055 Radical SAM superfamily DP_RS08875 PF02142 MGS-like domain DP_RS08875 PF01808 AICARFT/IMPCHase bienzyme DP_RS08880 PF00348 Polyprenyl synthetase DP_RS08885 PF06733 DEAD_2 DP_RS08885 PF13307 Helicase C-terminal domain DP_RS08910 PF00534 Glycosyl transferases group 1 DP_RS08915 PF00300 Histidine phosphatase superfamily (branch 1) DP_RS08930 PF02687 FtsX-like permease family DP_RS08930 PF00005 ABC transporter DP_RS08930 PF12704 MacB-like periplasmic core domain DP_RS08935 PF00005 ABC transporter DP_RS08985 PF00902 Sec-independent protein translocase protein (TatC) DP_RS08990 PF02403 Seryl-tRNA synthetase N-terminal domain DP_RS08990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DP_RS09010 PF13247 4Fe-4S dicluster domain DP_RS09015 PF00384 Molybdopterin oxidoreductase DP_RS09015 PF01568 Molydopterin dinucleotide binding domain DP_RS09015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS09035 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DP_RS09035 PF01568 Molydopterin dinucleotide binding domain DP_RS09035 PF13237 4Fe-4S dicluster domain DP_RS09035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS09035 PF00384 Molybdopterin oxidoreductase DP_RS09040 PF00072 Response regulator receiver domain DP_RS09040 PF00196 Bacterial regulatory proteins, luxR family DP_RS09045 PF07730 Histidine kinase DP_RS09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS09055 PF02254 TrkA-N domain DP_RS09055 PF00999 Sodium/hydrogen exchanger family DP_RS09060 PF02634 FdhD/NarQ family DP_RS09065 PF01758 Sodium Bile acid symporter family DP_RS09100 PF00005 ABC transporter DP_RS09125 PF00360 Phytochrome region DP_RS09125 PF01590 GAF domain DP_RS09125 PF00563 EAL domain DP_RS09125 PF00990 Diguanylate cyclase, GGDEF domain DP_RS09130 PF01339 CheB methylesterase DP_RS09135 PF01739 CheR methyltransferase, SAM binding domain DP_RS09135 PF03705 CheR methyltransferase, all-alpha domain DP_RS09140 PF00072 Response regulator receiver domain DP_RS09140 PF01627 Hpt domain DP_RS09140 PF00672 HAMP domain DP_RS09140 PF00512 His Kinase A (phospho-acceptor) domain DP_RS09140 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DP_RS09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS09155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DP_RS09155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DP_RS09160 PF00133 tRNA synthetases class I (I, L, M and V) DP_RS09160 PF10458 Valyl tRNA synthetase tRNA binding arm DP_RS09160 PF08264 Anticodon-binding domain of tRNA DP_RS09165 PF13286 Phosphohydrolase-associated domain DP_RS09165 PF01966 HD domain DP_RS09170 PF08534 Redoxin DP_RS09175 PF00113 Enolase, C-terminal TIM barrel domain DP_RS09175 PF03952 Enolase, N-terminal domain DP_RS09190 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DP_RS09190 PF11973 NQRA C-terminal domain DP_RS09195 PF03116 NQR2, RnfD, RnfE family DP_RS09200 PF04205 FMN-binding domain DP_RS09205 PF02508 Rnf-Nqr subunit, membrane protein DP_RS09210 PF02508 Rnf-Nqr subunit, membrane protein DP_RS09215 PF00175 Oxidoreductase NAD-binding domain DP_RS09215 PF00111 2Fe-2S iron-sulfur cluster binding domain DP_RS09215 PF00970 Oxidoreductase FAD-binding domain DP_RS09225 PF00472 RF-1 domain DP_RS09225 PF03462 PCRF domain DP_RS09230 PF00795 Carbon-nitrogen hydrolase DP_RS09235 PF00571 CBS domain DP_RS09235 PF01595 Cyclin M transmembrane N-terminal domain DP_RS09235 PF03471 Transporter associated domain DP_RS09240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DP_RS09240 PF00289 Biotin carboxylase, N-terminal domain DP_RS09240 PF02785 Biotin carboxylase C-terminal domain DP_RS09245 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DP_RS09255 PF13406 Transglycosylase SLT domain DP_RS09260 PF04055 Radical SAM superfamily DP_RS09280 PF06445 GyrI-like small molecule binding domain DP_RS09280 PF13411 MerR HTH family regulatory protein DP_RS09290 PF00936 BMC domain DP_RS09295 PF00465 Iron-containing alcohol dehydrogenase DP_RS09295 PF00171 Aldehyde dehydrogenase family DP_RS09300 PF01228 Glycine radical DP_RS09300 PF02901 Pyruvate formate lyase-like DP_RS09305 PF04055 Radical SAM superfamily DP_RS09305 PF13187 4Fe-4S dicluster domain DP_RS09320 PF00936 BMC domain DP_RS09365 PF00550 Phosphopantetheine attachment site DP_RS09375 PF00005 ABC transporter DP_RS09390 PF00109 Beta-ketoacyl synthase, N-terminal domain DP_RS09390 PF02801 Beta-ketoacyl synthase, C-terminal domain DP_RS09435 PF02801 Beta-ketoacyl synthase, C-terminal domain DP_RS09435 PF00109 Beta-ketoacyl synthase, N-terminal domain DP_RS09450 PF00535 Glycosyl transferase family 2 DP_RS09465 PF04055 Radical SAM superfamily DP_RS09465 PF13186 Iron-sulfur cluster-binding domain DP_RS09480 PF00550 Phosphopantetheine attachment site DP_RS09485 PF00109 Beta-ketoacyl synthase, N-terminal domain DP_RS09485 PF02801 Beta-ketoacyl synthase, C-terminal domain DP_RS09490 PF02910 Fumarate reductase flavoprotein C-term DP_RS09490 PF00890 FAD binding domain DP_RS09495 PF07690 Major Facilitator Superfamily DP_RS09505 PF07690 Major Facilitator Superfamily DP_RS09525 PF00011 Hsp20/alpha crystallin family DP_RS09530 PF12833 Helix-turn-helix domain DP_RS09530 PF06719 AraC-type transcriptional regulator N-terminus DP_RS09535 PF00465 Iron-containing alcohol dehydrogenase DP_RS09540 PF16200 C-terminal region of band_7 DP_RS09540 PF01145 SPFH domain / Band 7 family DP_RS09550 PF13478 XdhC Rossmann domain DP_RS09550 PF02625 XdhC and CoxI family DP_RS09560 PF00313 'Cold-shock' DNA-binding domain DP_RS09565 PF00581 Rhodanese-like domain DP_RS09565 PF11127 Protein of unknown function (DUF2892) DP_RS09570 PF03006 Haemolysin-III related DP_RS09575 PF00464 Serine hydroxymethyltransferase DP_RS09585 PF06167 Glucose-regulated metallo-peptidase M90 DP_RS09590 PF01042 Endoribonuclease L-PSP DP_RS09595 PF01451 Low molecular weight phosphotyrosine protein phosphatase DP_RS09600 PF00005 ABC transporter DP_RS09610 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS09615 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS09620 PF01895 PhoU domain DP_RS09625 PF00486 Transcriptional regulatory protein, C terminal DP_RS09625 PF00072 Response regulator receiver domain DP_RS09630 PF16736 Single Cache-like DP_RS09630 PF00512 His Kinase A (phospho-acceptor) domain DP_RS09630 PF00989 PAS fold DP_RS09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS09635 PF03831 PhnA domain DP_RS09635 PF08274 PhnA Zinc-Ribbon DP_RS09650 PF00664 ABC transporter transmembrane region DP_RS09650 PF00005 ABC transporter DP_RS09665 PF01740 STAS domain DP_RS09695 PF16591 Helical bimodular sensor domain DP_RS09695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS09695 PF00672 HAMP domain DP_RS09705 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DP_RS09705 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DP_RS09715 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DP_RS09725 PF13291 ACT domain DP_RS09725 PF04607 Region found in RelA / SpoT proteins DP_RS09725 PF02824 TGS domain DP_RS09730 PF00575 S1 RNA binding domain DP_RS09730 PF08206 Ribonuclease B OB domain DP_RS09730 PF17876 Cold shock domain DP_RS09730 PF00773 RNB domain DP_RS09745 PF00365 Phosphofructokinase DP_RS09755 PF02861 Clp amino terminal domain, pathogenicity island component DP_RS09755 PF00004 ATPase family associated with various cellular activities (AAA) DP_RS09755 PF10431 C-terminal, D2-small domain, of ClpB protein DP_RS09755 PF17871 AAA lid domain DP_RS09755 PF07724 AAA domain (Cdc48 subfamily) DP_RS09785 PF02525 Flavodoxin-like fold DP_RS09790 PF00999 Sodium/hydrogen exchanger family DP_RS09790 PF02254 TrkA-N domain DP_RS09800 PF00171 Aldehyde dehydrogenase family DP_RS09815 PF17854 FtsK alpha domain DP_RS09815 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DP_RS09815 PF01580 FtsK/SpoIIIE family DP_RS09820 PF01177 Asp/Glu/Hydantoin racemase DP_RS09860 PF00919 Uncharacterized protein family UPF0004 DP_RS09860 PF01938 TRAM domain DP_RS09860 PF04055 Radical SAM superfamily DP_RS09870 PF00206 Lyase DP_RS09870 PF10397 Adenylosuccinate lyase C-terminus DP_RS09875 PF01368 DHH family DP_RS09875 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DP_RS09875 PF17768 RecJ OB domain DP_RS09875 PF02272 DHHA1 domain DP_RS09890 PF00588 SpoU rRNA Methylase family DP_RS09895 PF00266 Aminotransferase class-V DP_RS09905 PF04055 Radical SAM superfamily DP_RS09910 PF02684 Lipid-A-disaccharide synthetase DP_RS09915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DP_RS09915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DP_RS09920 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DP_RS09925 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DP_RS09935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DP_RS09940 PF02261 Aspartate decarboxylase DP_RS09945 PF02569 Pantoate-beta-alanine ligase DP_RS09955 PF13742 OB-fold nucleic acid binding domain DP_RS09955 PF02601 Exonuclease VII, large subunit DP_RS09970 PF00334 Nucleoside diphosphate kinase DP_RS09975 PF03186 CobD/Cbib protein DP_RS09980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DP_RS09980 PF07685 CobB/CobQ-like glutamine amidotransferase domain DP_RS09980 PF00155 Aminotransferase class I and II DP_RS09985 PF02654 Cobalamin-5-phosphate synthase DP_RS09990 PF02277 Phosphoribosyltransferase DP_RS09995 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DP_RS10010 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DP_RS10015 PF00330 Aconitase family (aconitate hydratase) DP_RS10020 PF00694 Aconitase C-terminal domain DP_RS10025 PF00158 Sigma-54 interaction domain DP_RS10025 PF02954 Bacterial regulatory protein, Fis family DP_RS10025 PF00072 Response regulator receiver domain DP_RS10055 PF01556 DnaJ C terminal domain DP_RS10055 PF00226 DnaJ domain DP_RS10070 PF01134 Glucose inhibited division protein A DP_RS10080 PF10609 NUBPL iron-transfer P-loop NTPase DP_RS10085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DP_RS10085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DP_RS10090 PF01791 DeoC/LacD family aldolase DP_RS10095 PF00294 pfkB family carbohydrate kinase DP_RS10100 PF02525 Flavodoxin-like fold DP_RS10105 PF00270 DEAD/DEAH box helicase DP_RS10105 PF00271 Helicase conserved C-terminal domain DP_RS10105 PF03880 DbpA RNA binding domain DP_RS10115 PF06445 GyrI-like small molecule binding domain DP_RS10120 PF00589 Phage integrase family DP_RS10120 PF13495 Phage integrase, N-terminal SAM-like domain DP_RS10135 PF00360 Phytochrome region DP_RS10135 PF00990 Diguanylate cyclase, GGDEF domain DP_RS10135 PF01590 GAF domain DP_RS10135 PF00563 EAL domain DP_RS10140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS10140 PF17200 Single Cache domain 2 DP_RS10140 PF00672 HAMP domain DP_RS10150 PF00528 Binding-protein-dependent transport system inner membrane component DP_RS10155 PF00005 ABC transporter DP_RS10170 PF02689 Helicase DP_RS10170 PF05970 PIF1-like helicase DP_RS10185 PF05036 Sporulation related domain DP_RS10185 PF03330 Lytic transglycolase DP_RS10350 PF00672 HAMP domain DP_RS10350 PF01966 HD domain DP_RS10415 PF01844 HNH endonuclease DP_RS10420 PF00145 C-5 cytosine-specific DNA methylase DP_RS10450 PF00072 Response regulator receiver domain DP_RS10450 PF00990 Diguanylate cyclase, GGDEF domain DP_RS10460 PF00114 Pilin (bacterial filament) DP_RS10460 PF07963 Prokaryotic N-terminal methylation motif DP_RS10540 PF01381 Helix-turn-helix DP_RS10550 PF00302 Chloramphenicol acetyltransferase DP_RS10590 PF00313 'Cold-shock' DNA-binding domain DP_RS10600 PF03600 Citrate transporter DP_RS10605 PF11849 Domain of unknown function (DUF3369) DP_RS10650 PF02913 FAD linked oxidases, C-terminal domain DP_RS10650 PF01565 FAD binding domain DP_RS10655 PF02652 L-lactate permease DP_RS10665 PF00962 Adenosine/AMP deaminase DP_RS10675 PF00270 DEAD/DEAH box helicase DP_RS10675 PF04408 Helicase associated domain (HA2) DP_RS10675 PF08482 ATP-dependent helicase C-terminal DP_RS10675 PF00271 Helicase conserved C-terminal domain DP_RS10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DP_RS10685 PF03466 LysR substrate binding domain DP_RS10700 PF03099 Biotin/lipoate A/B protein ligase family DP_RS10700 PF10437 Bacterial lipoate protein ligase C-terminus DP_RS10710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DP_RS10710 PF00364 Biotin-requiring enzyme DP_RS10710 PF02817 e3 binding domain DP_RS10715 PF02780 Transketolase, C-terminal domain DP_RS10715 PF02779 Transketolase, pyrimidine binding domain DP_RS10715 PF00364 Biotin-requiring enzyme DP_RS10720 PF00676 Dehydrogenase E1 component DP_RS10725 PF13193 AMP-binding enzyme C-terminal domain DP_RS10725 PF00501 AMP-binding enzyme DP_RS10740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DP_RS10760 PF13181 Tetratricopeptide repeat DP_RS10770 PF00664 ABC transporter transmembrane region DP_RS10770 PF00005 ABC transporter DP_RS10775 PF13533 Biotin-lipoyl like DP_RS10780 PF01747 ATP-sulfurylase DP_RS10780 PF14306 PUA-like domain DP_RS10795 PF11849 Domain of unknown function (DUF3369) DP_RS10820 PF00581 Rhodanese-like domain DP_RS10830 PF00301 Rubredoxin DP_RS10830 PF00258 Flavodoxin DP_RS10830 PF00753 Metallo-beta-lactamase superfamily DP_RS10840 PF02321 Outer membrane efflux protein DP_RS10845 PF00873 AcrB/AcrD/AcrF family DP_RS10855 PF00440 Bacterial regulatory proteins, tetR family DP_RS10855 PF16295 Tetracyclin repressor-like, C-terminal domain DP_RS10875 PF01047 MarR family DP_RS10905 PF04286 Protein of unknown function (DUF445) DP_RS10910 PF13419 Haloacid dehalogenase-like hydrolase DP_RS10920 PF00890 FAD binding domain DP_RS10920 PF02910 Fumarate reductase flavoprotein C-term DP_RS10930 PF01494 FAD binding domain DP_RS10960 PF00106 short chain dehydrogenase DP_RS10995 PF08212 Lipocalin-like domain DP_RS11005 PF03851 UV-endonuclease UvdE DP_RS11015 PF00465 Iron-containing alcohol dehydrogenase DP_RS11020 PF06719 AraC-type transcriptional regulator N-terminus DP_RS11020 PF12833 Helix-turn-helix domain DP_RS11025 PF04055 Radical SAM superfamily DP_RS11025 PF12544 Lysine-2,3-aminomutase DP_RS11055 PF01433 Peptidase family M1 domain DP_RS11055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DP_RS11055 PF11940 Domain of unknown function (DUF3458) Ig-like fold DP_RS11065 PF02401 LytB protein DP_RS11070 PF00977 Histidine biosynthesis protein DP_RS11075 PF12557 Cob(I)alamin adenosyltransferase N terminal DP_RS11075 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DP_RS11080 PF00216 Bacterial DNA-binding protein DP_RS11085 PF09179 TilS substrate binding domain DP_RS11085 PF01171 PP-loop family DP_RS11085 PF11734 TilS substrate C-terminal domain DP_RS11090 PF00800 Prephenate dehydratase DP_RS11090 PF01817 Chorismate mutase type II DP_RS11090 PF01842 ACT domain DP_RS11095 PF06463 Molybdenum Cofactor Synthesis C DP_RS11095 PF04055 Radical SAM superfamily DP_RS11100 PF00814 Glycoprotease family DP_RS11110 PF00398 Ribosomal RNA adenine dimethylase DP_RS11135 PF01368 DHH family DP_RS11135 PF02833 DHHA2 domain DP_RS11150 PF02127 Aminopeptidase I zinc metalloprotease (M18) DP_RS11160 PF12848 ABC transporter DP_RS11160 PF00005 ABC transporter DP_RS11165 PF03315 Serine dehydratase beta chain DP_RS11165 PF03313 Serine dehydratase alpha chain DP_RS11170 PF03481 Putative GTP-binding controlling metal-binding DP_RS11170 PF01300 Telomere recombination DP_RS11175 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DP_RS11175 PF02843 Phosphoribosylglycinamide synthetase, C domain DP_RS11175 PF02844 Phosphoribosylglycinamide synthetase, N domain DP_RS11180 PF03449 Transcription elongation factor, N-terminal DP_RS11180 PF01272 Transcription elongation factor, GreA/GreB, C-term DP_RS11190 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DP_RS11195 PF04545 Sigma-70, region 4 DP_RS11195 PF00140 Sigma-70 factor, region 1.2 DP_RS11195 PF04542 Sigma-70 region 2 DP_RS11200 PF00009 Elongation factor Tu GTP binding domain DP_RS11200 PF03144 Elongation factor Tu domain 2 DP_RS11200 PF00679 Elongation factor G C-terminus DP_RS11200 PF06421 GTP-binding protein LepA C-terminus DP_RS11215 PF00892 EamA-like transporter family DP_RS11225 PF11799 impB/mucB/samB family C-terminal domain DP_RS11225 PF00817 impB/mucB/samB family DP_RS11230 PF01343 Peptidase family S49 DP_RS11235 PF00313 'Cold-shock' DNA-binding domain DP_RS11240 PF00809 Pterin binding enzyme DP_RS11240 PF02607 B12 binding domain DP_RS11240 PF02965 Vitamin B12 dependent methionine synthase, activation domain DP_RS11240 PF02574 Homocysteine S-methyltransferase DP_RS11240 PF02310 B12 binding domain DP_RS11245 PF02310 B12 binding domain DP_RS11245 PF02574 Homocysteine S-methyltransferase DP_RS11245 PF02607 B12 binding domain DP_RS11245 PF02965 Vitamin B12 dependent methionine synthase, activation domain DP_RS11245 PF00809 Pterin binding enzyme DP_RS11250 PF00390 Malic enzyme, N-terminal domain DP_RS11250 PF03949 Malic enzyme, NAD binding domain DP_RS11255 PF04055 Radical SAM superfamily DP_RS11255 PF12544 Lysine-2,3-aminomutase DP_RS11260 PF00990 Diguanylate cyclase, GGDEF domain DP_RS11260 PF00072 Response regulator receiver domain DP_RS11265 PF17764 3′ DNA-binding domain (3′BD) DP_RS11265 PF04851 Type III restriction enzyme, res subunit DP_RS11265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DP_RS11265 PF18074 Primosomal protein N C-terminal domain DP_RS11265 PF00271 Helicase conserved C-terminal domain DP_RS11270 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DP_RS11270 PF04408 Helicase associated domain (HA2) DP_RS11270 PF00270 DEAD/DEAH box helicase DP_RS11270 PF11898 Domain of unknown function (DUF3418) DP_RS11270 PF00271 Helicase conserved C-terminal domain DP_RS11280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DP_RS11280 PF00037 4Fe-4S binding domain DP_RS11280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DP_RS11285 PF00384 Molybdopterin oxidoreductase DP_RS11285 PF01568 Molydopterin dinucleotide binding domain DP_RS11285 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DP_RS11285 PF13237 4Fe-4S dicluster domain DP_RS11285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS11290 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DP_RS11295 PF00374 Nickel-dependent hydrogenase DP_RS11300 PF01933 Uncharacterised protein family UPF0052 DP_RS11310 PF04445 Putative SAM-dependent methyltransferase DP_RS11315 PF02590 Predicted SPOUT methyltransferase DP_RS11325 PF02622 Uncharacterized ACR, COG1678 DP_RS11330 PF00535 Glycosyl transferase family 2 DP_RS11340 PF00483 Nucleotidyl transferase DP_RS11345 PF04321 RmlD substrate binding domain DP_RS11350 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DP_RS11355 PF00534 Glycosyl transferases group 1 DP_RS11355 PF13439 Glycosyltransferase Family 4 DP_RS11365 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DP_RS11365 PF00437 Type II/IV secretion system protein DP_RS11370 PF01268 Formate--tetrahydrofolate ligase DP_RS11380 PF00266 Aminotransferase class-V DP_RS11385 PF01592 NifU-like N terminal domain DP_RS11385 PF04324 BFD-like [2Fe-2S] binding domain DP_RS11385 PF01106 NifU-like domain DP_RS11390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DP_RS11390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DP_RS11390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DP_RS11390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DP_RS11395 PF14748 Pyrroline-5-carboxylate reductase dimerisation DP_RS11395 PF03807 NADP oxidoreductase coenzyme F420-dependent DP_RS11400 PF01513 ATP-NAD kinase DP_RS11405 PF00158 Sigma-54 interaction domain DP_RS11405 PF02954 Bacterial regulatory protein, Fis family DP_RS11405 PF00072 Response regulator receiver domain DP_RS11410 PF02811 PHP domain DP_RS11430 PF00557 Metallopeptidase family M24 DP_RS11435 PF02954 Bacterial regulatory protein, Fis family DP_RS11435 PF13426 PAS domain DP_RS11435 PF00158 Sigma-54 interaction domain DP_RS11440 PF01042 Endoribonuclease L-PSP DP_RS11445 PF03401 Tripartite tricarboxylate transporter family receptor DP_RS11450 PF01970 Tripartite tricarboxylate transporter TctA family DP_RS11460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS11460 PF17806 Sarcosine oxidase A3 domain DP_RS11470 PF01266 FAD dependent oxidoreductase DP_RS11485 PF18389 TrmO C-terminal domain DP_RS11485 PF01980 tRNA-methyltransferase O DP_RS11510 PF01966 HD domain DP_RS11510 PF11871 Domain of unknown function (DUF3391) DP_RS11515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS11515 PF08269 Cache domain DP_RS11520 PF01566 Natural resistance-associated macrophage protein DP_RS11545 PF05175 Methyltransferase small domain DP_RS11550 PF13335 Magnesium chelatase, subunit ChlI C-terminal DP_RS11550 PF01078 Magnesium chelatase, subunit ChlI DP_RS11560 PF00586 AIR synthase related protein, N-terminal domain DP_RS11560 PF02769 AIR synthase related protein, C-terminal domain DP_RS11565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DP_RS11600 PF02016 LD-carboxypeptidase N-terminal domain DP_RS11600 PF17676 LD-carboxypeptidase C-terminal domain DP_RS11605 PF03309 Type III pantothenate kinase DP_RS11615 PF00204 DNA gyrase B DP_RS11615 PF00986 DNA gyrase B subunit, carboxyl terminus DP_RS11615 PF01751 Toprim domain DP_RS11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS11620 PF00521 DNA gyrase/topoisomerase IV, subunit A DP_RS11630 PF05154 TM2 domain DP_RS11635 PF04333 MlaA lipoprotein DP_RS11650 PF00005 ABC transporter DP_RS11650 PF09383 NIL domain DP_RS11655 PF02405 Permease MlaE DP_RS11670 PF00072 Response regulator receiver domain DP_RS11685 PF01810 LysE type translocator DP_RS11690 PF09587 Bacterial capsule synthesis protein PGA_cap DP_RS11695 PF12706 Beta-lactamase superfamily domain DP_RS11755 PF00158 Sigma-54 interaction domain DP_RS11755 PF02954 Bacterial regulatory protein, Fis family DP_RS11755 PF01590 GAF domain DP_RS11760 PF03781 Sulfatase-modifying factor enzyme 1 DP_RS11760 PF00069 Protein kinase domain DP_RS11770 PF00440 Bacterial regulatory proteins, tetR family DP_RS11785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DP_RS11790 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DP_RS11790 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DP_RS11790 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DP_RS11800 PF07690 Major Facilitator Superfamily DP_RS11805 PF00392 Bacterial regulatory proteins, gntR family DP_RS11805 PF07729 FCD domain DP_RS11815 PF08443 RimK-like ATP-grasp domain DP_RS11815 PF18030 RimK PreATP-grasp domain DP_RS11830 PF00205 Thiamine pyrophosphate enzyme, central domain DP_RS11830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DP_RS11830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DP_RS11835 PF00171 Aldehyde dehydrogenase family DP_RS11840 PF00202 Aminotransferase class-III DP_RS11845 PF02913 FAD linked oxidases, C-terminal domain DP_RS11845 PF01565 FAD binding domain DP_RS11845 PF13183 4Fe-4S dicluster domain DP_RS11905 PF07729 FCD domain DP_RS11905 PF00392 Bacterial regulatory proteins, gntR family DP_RS11920 PF07837 Formiminotransferase domain, N-terminal subdomain DP_RS11920 PF02971 Formiminotransferase domain DP_RS11925 PF01979 Amidohydrolase family DP_RS11930 PF01175 Urocanase Rossmann-like domain DP_RS11930 PF17391 Urocanase N-terminal domain DP_RS11930 PF17392 Urocanase C-terminal domain DP_RS11935 PF00221 Aromatic amino acid lyase DP_RS11940 PF14437 MafB19-like deaminase DP_RS11945 PF01569 PAP2 superfamily DP_RS11950 PF01416 tRNA pseudouridine synthase DP_RS11970 PF01584 CheW-like domain DP_RS11975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS11975 PF08447 PAS fold DP_RS11975 PF13426 PAS domain DP_RS11985 PF00850 Histone deacetylase domain DP_RS11995 PF01569 PAP2 superfamily DP_RS12005 PF01209 ubiE/COQ5 methyltransferase family DP_RS12060 PF04055 Radical SAM superfamily DP_RS12060 PF06968 Biotin and Thiamin Synthesis associated domain DP_RS12065 PF04055 Radical SAM superfamily DP_RS12065 PF06968 Biotin and Thiamin Synthesis associated domain DP_RS12070 PF01926 50S ribosome-binding GTPase DP_RS12070 PF12631 MnmE helical domain DP_RS12070 PF10396 GTP-binding protein TrmE N-terminus DP_RS12085 PF00004 ATPase family associated with various cellular activities (AAA) DP_RS12085 PF17866 AAA lid domain DP_RS12100 PF02673 Bacitracin resistance protein BacA DP_RS12110 PF01661 Macro domain DP_RS12115 PF00206 Lyase DP_RS12115 PF10415 Fumarase C C-terminus DP_RS12145 PF18030 RimK PreATP-grasp domain DP_RS12145 PF08443 RimK-like ATP-grasp domain DP_RS12155 PF04074 YhcH/YjgK/YiaL DP_RS12160 PF00994 Probable molybdopterin binding domain DP_RS12165 PF14492 Elongation Factor G, domain II DP_RS12165 PF00679 Elongation factor G C-terminus DP_RS12165 PF00009 Elongation factor Tu GTP binding domain DP_RS12165 PF03764 Elongation factor G, domain IV DP_RS12165 PF03144 Elongation factor Tu domain 2 DP_RS12170 PF03023 Lipid II flippase MurJ DP_RS12180 PF01207 Dihydrouridine synthase (Dus) DP_RS12195 PF00109 Beta-ketoacyl synthase, N-terminal domain DP_RS12195 PF02801 Beta-ketoacyl synthase, C-terminal domain DP_RS12200 PF00550 Phosphopantetheine attachment site DP_RS12210 PF01494 FAD binding domain DP_RS12220 PF07977 FabA-like domain DP_RS12225 PF01618 MotA/TolQ/ExbB proton channel family DP_RS12240 PF07676 WD40-like Beta Propeller Repeat DP_RS12240 PF04052 TolB amino-terminal domain DP_RS12250 PF01728 FtsJ-like methyltransferase DP_RS12250 PF01479 S4 domain DP_RS12260 PF03372 Endonuclease/Exonuclease/phosphatase family DP_RS12265 PF00905 Penicillin binding protein transpeptidase domain DP_RS12265 PF14814 Bifunctional transglycosylase second domain DP_RS12265 PF00912 Transglycosylase DP_RS12275 PF03793 PASTA domain DP_RS12275 PF00069 Protein kinase domain DP_RS12300 PF03717 Penicillin-binding Protein dimerisation domain DP_RS12300 PF00905 Penicillin binding protein transpeptidase domain DP_RS12300 PF05223 NTF2-like N-terminal transpeptidase domain DP_RS12310 PF01098 Cell cycle protein DP_RS12390 PF00232 Glycosyl hydrolase family 1 DP_RS12400 PF13439 Glycosyltransferase Family 4 DP_RS12405 PF04041 beta-1,4-mannooligosaccharide phosphorylase DP_RS12420 PF01791 DeoC/LacD family aldolase DP_RS12430 PF01238 Phosphomannose isomerase type I DP_RS12460 PF14815 NUDIX domain DP_RS12460 PF00730 HhH-GPD superfamily base excision DNA repair protein DP_RS12460 PF00633 Helix-hairpin-helix motif DP_RS12470 PF03591 AzlC protein DP_RS12475 PF00465 Iron-containing alcohol dehydrogenase DP_RS12480 PF03372 Endonuclease/Exonuclease/phosphatase family DP_RS12485 PF13419 Haloacid dehalogenase-like hydrolase DP_RS12515 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DP_RS12515 PF01676 Metalloenzyme superfamily DP_RS12525 PF00994 Probable molybdopterin binding domain DP_RS12525 PF03453 MoeA N-terminal region (domain I and II) DP_RS12525 PF03454 MoeA C-terminal region (domain IV) DP_RS12530 PF03454 MoeA C-terminal region (domain IV) DP_RS12530 PF03453 MoeA N-terminal region (domain I and II) DP_RS12530 PF00994 Probable molybdopterin binding domain DP_RS12545 PF08459 UvrC Helix-hairpin-helix N-terminal DP_RS12545 PF01541 GIY-YIG catalytic domain DP_RS12545 PF02151 UvrB/uvrC motif DP_RS12570 PF01312 FlhB HrpN YscU SpaS Family DP_RS12580 PF00005 ABC transporter DP_RS12585 PF12399 Branched-chain amino acid ATP-binding cassette transporter DP_RS12585 PF00005 ABC transporter DP_RS12590 PF11862 Domain of unknown function (DUF3382) DP_RS12590 PF02653 Branched-chain amino acid transport system / permease component DP_RS12595 PF02653 Branched-chain amino acid transport system / permease component DP_RS12605 PF00171 Aldehyde dehydrogenase family DP_RS12610 PF01619 Proline dehydrogenase DP_RS12645 PF01964 Radical SAM ThiC family DP_RS12650 PF01202 Shikimate kinase DP_RS12660 PF01370 NAD dependent epimerase/dehydratase family DP_RS12660 PF08338 Domain of unknown function (DUF1731) DP_RS12665 PF01259 SAICAR synthetase DP_RS12670 PF00140 Sigma-70 factor, region 1.2 DP_RS12670 PF04545 Sigma-70, region 4 DP_RS12670 PF04542 Sigma-70 region 2 DP_RS12670 PF03979 Sigma-70 factor, region 1.1 DP_RS12670 PF04546 Sigma-70, non-essential region DP_RS12670 PF04539 Sigma-70 region 3 DP_RS12690 PF01053 Cys/Met metabolism PLP-dependent enzyme DP_RS12695 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DP_RS12725 PF01869 BadF/BadG/BcrA/BcrD ATPase family DP_RS12730 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DP_RS12740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS12740 PF17200 Single Cache domain 2 DP_RS12740 PF00672 HAMP domain DP_RS12750 PF01184 GPR1/FUN34/yaaH family DP_RS12755 PF00360 Phytochrome region DP_RS12755 PF00563 EAL domain DP_RS12755 PF01590 GAF domain DP_RS12755 PF00990 Diguanylate cyclase, GGDEF domain DP_RS12760 PF00293 NUDIX domain DP_RS12780 PF16326 ABC transporter C-terminal domain DP_RS12780 PF12848 ABC transporter DP_RS12780 PF00005 ABC transporter DP_RS12790 PF02445 Quinolinate synthetase A protein DP_RS12795 PF00534 Glycosyl transferases group 1 DP_RS12795 PF13439 Glycosyltransferase Family 4 DP_RS12805 PF03618 Kinase/pyrophosphorylase DP_RS12815 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DP_RS12815 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DP_RS12820 PF01799 [2Fe-2S] binding domain DP_RS12820 PF00111 2Fe-2S iron-sulfur cluster binding domain DP_RS12825 PF00941 FAD binding domain in molybdopterin dehydrogenase DP_RS12825 PF03450 CO dehydrogenase flavoprotein C-terminal domain DP_RS12830 PF02769 AIR synthase related protein, C-terminal domain DP_RS12830 PF00586 AIR synthase related protein, N-terminal domain DP_RS12895 PF05362 Lon protease (S16) C-terminal proteolytic domain DP_RS12895 PF00004 ATPase family associated with various cellular activities (AAA) DP_RS12895 PF02190 ATP-dependent protease La (LON) substrate-binding domain DP_RS12900 PF07724 AAA domain (Cdc48 subfamily) DP_RS12900 PF06689 ClpX C4-type zinc finger DP_RS12900 PF10431 C-terminal, D2-small domain, of ClpB protein DP_RS12905 PF00574 Clp protease DP_RS12910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DP_RS12910 PF05698 Bacterial trigger factor protein (TF) C-terminus DP_RS12910 PF05697 Bacterial trigger factor protein (TF) DP_RS12915 PF00571 CBS domain DP_RS12915 PF01769 Divalent cation transporter DP_RS12915 PF03448 MgtE intracellular N domain DP_RS12920 PF08241 Methyltransferase domain DP_RS12940 PF08241 Methyltransferase domain DP_RS12945 PF08241 Methyltransferase domain DP_RS12945 PF04301 Protein of unknown function (DUF452) DP_RS12950 PF00155 Aminotransferase class I and II DP_RS12955 PF04055 Radical SAM superfamily DP_RS12955 PF06968 Biotin and Thiamin Synthesis associated domain DP_RS12955 PF00202 Aminotransferase class-III DP_RS12960 PF06968 Biotin and Thiamin Synthesis associated domain DP_RS12960 PF04055 Radical SAM superfamily DP_RS12965 PF00698 Acyl transferase domain DP_RS12970 PF01252 Signal peptidase (SPase) II DP_RS12975 PF06827 Zinc finger found in FPG and IleRS DP_RS12975 PF00133 tRNA synthetases class I (I, L, M and V) DP_RS12975 PF08264 Anticodon-binding domain of tRNA DP_RS12980 PF00005 ABC transporter DP_RS12985 PF18075 FtsX extracellular domain DP_RS12985 PF02687 FtsX-like permease family DP_RS12995 PF03572 Peptidase family S41 DP_RS12995 PF13180 PDZ domain DP_RS13085 PF13460 NAD(P)H-binding DP_RS13085 PF11066 Protein of unknown function (DUF2867) DP_RS13090 PF00436 Single-strand binding protein family DP_RS13095 PF00535 Glycosyl transferase family 2 DP_RS13100 PF00575 S1 RNA binding domain DP_RS13100 PF10150 Ribonuclease E/G family DP_RS13120 PF01256 Carbohydrate kinase DP_RS13120 PF03853 YjeF-related protein N-terminus DP_RS13125 PF03167 Uracil DNA glycosylase superfamily DP_RS13130 PF01339 CheB methylesterase DP_RS13130 PF00072 Response regulator receiver domain DP_RS13140 PF00171 Aldehyde dehydrogenase family DP_RS13145 PF01472 PUA domain DP_RS13145 PF00696 Amino acid kinase family DP_RS13150 PF01018 GTP1/OBG DP_RS13150 PF01926 50S ribosome-binding GTPase DP_RS13155 PF01016 Ribosomal L27 protein DP_RS13160 PF00829 Ribosomal prokaryotic L21 protein DP_RS13170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DP_RS13170 PF03819 MazG nucleotide pyrophosphohydrolase domain DP_RS13175 PF01250 Ribosomal protein S6 DP_RS13180 PF01084 Ribosomal protein S18 DP_RS13190 PF01281 Ribosomal protein L9, N-terminal domain DP_RS13190 PF03948 Ribosomal protein L9, C-terminal domain DP_RS13195 PF00772 DnaB-like helicase N terminal domain DP_RS13195 PF03796 DnaB-like helicase C terminal domain DP_RS13200 PF13603 Leucyl-tRNA synthetase, Domain 2 DP_RS13200 PF00133 tRNA synthetases class I (I, L, M and V) DP_RS13200 PF08264 Anticodon-binding domain of tRNA DP_RS13210 PF01207 Dihydrouridine synthase (Dus) DP_RS13220 PF00883 Cytosol aminopeptidase family, catalytic domain DP_RS13220 PF02789 Cytosol aminopeptidase family, N-terminal domain DP_RS13225 PF01595 Cyclin M transmembrane N-terminal domain DP_RS13225 PF00571 CBS domain DP_RS13230 PF00753 Metallo-beta-lactamase superfamily DP_RS13235 PF00692 dUTPase DP_RS13240 PF00013 KH domain DP_RS13240 PF00575 S1 RNA binding domain DP_RS13240 PF01138 3' exoribonuclease family, domain 1 DP_RS13240 PF03725 3' exoribonuclease family, domain 2 DP_RS13240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DP_RS13245 PF00312 Ribosomal protein S15 DP_RS13250 PF16198 tRNA pseudouridylate synthase B C-terminal domain DP_RS13250 PF01509 TruB family pseudouridylate synthase (N terminal domain) DP_RS13260 PF02033 Ribosome-binding factor A DP_RS13265 PF00009 Elongation factor Tu GTP binding domain DP_RS13265 PF11987 Translation-initiation factor 2 DP_RS13265 PF04760 Translation initiation factor IF-2, N-terminal region DP_RS13275 PF00575 S1 RNA binding domain DP_RS13275 PF13184 NusA-like KH domain DP_RS13275 PF08529 NusA N-terminal domain DP_RS13280 PF17384 RimP C-terminal SH3 domain DP_RS13280 PF02576 RimP N-terminal domain DP_RS13285 PF01131 DNA topoisomerase DP_RS13285 PF01751 Toprim domain DP_RS13295 PF14821 Threonine synthase N terminus DP_RS13295 PF00291 Pyridoxal-phosphate dependent enzyme DP_RS13300 PF02416 mttA/Hcf106 family DP_RS13305 PF02416 mttA/Hcf106 family DP_RS13315 PF01645 Conserved region in glutamate synthase DP_RS13315 PF13187 4Fe-4S dicluster domain DP_RS13320 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS13335 PF01865 Protein of unknown function DUF47 DP_RS13340 PF01384 Phosphate transporter family DP_RS13345 PF01435 Peptidase family M48 DP_RS13350 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DP_RS13355 PF00501 AMP-binding enzyme DP_RS13360 PF00561 alpha/beta hydrolase fold DP_RS13370 PF00664 ABC transporter transmembrane region DP_RS13370 PF00005 ABC transporter DP_RS13375 PF00989 PAS fold DP_RS13375 PF00512 His Kinase A (phospho-acceptor) domain DP_RS13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS13385 PF01926 50S ribosome-binding GTPase DP_RS13390 PF01634 ATP phosphoribosyltransferase DP_RS13390 PF08029 HisG, C-terminal domain DP_RS13395 PF01502 Phosphoribosyl-AMP cyclohydrolase DP_RS13400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DP_RS13405 PF00072 Response regulator receiver domain DP_RS13405 PF01584 CheW-like domain DP_RS13405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS13405 PF02895 Signal transducing histidine kinase, homodimeric domain DP_RS13405 PF01627 Hpt domain DP_RS13410 PF01584 CheW-like domain DP_RS13415 PF01339 CheB methylesterase DP_RS13415 PF00072 Response regulator receiver domain DP_RS13420 PF01739 CheR methyltransferase, SAM binding domain DP_RS13420 PF03705 CheR methyltransferase, all-alpha domain DP_RS13435 PF06490 Flagellar regulatory protein FleQ DP_RS13435 PF02954 Bacterial regulatory protein, Fis family DP_RS13435 PF00158 Sigma-54 interaction domain DP_RS13450 PF00072 Response regulator receiver domain DP_RS13460 PF00460 Flagella basal body rod protein DP_RS13465 PF00460 Flagella basal body rod protein DP_RS13465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DP_RS13470 PF02049 Flagellar hook-basal body complex protein FliE DP_RS13475 PF08345 Flagellar M-ring protein C-terminal DP_RS13475 PF01514 Secretory protein of YscJ/FliF family DP_RS13480 PF01706 FliG C-terminal domain DP_RS13480 PF14842 FliG N-terminal domain DP_RS13480 PF14841 FliG middle domain DP_RS13490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DP_RS13490 PF02874 ATP synthase alpha/beta family, beta-barrel domain DP_RS13490 PF18269 T3SS EscN ATPase C-terminal domain DP_RS13510 PF13861 FlgD Tudor-like domain DP_RS13510 PF13860 FlgD Ig-like domain DP_RS13510 PF03963 Flagellar hook capping protein - N-terminal region DP_RS13525 PF01618 MotA/TolQ/ExbB proton channel family DP_RS13530 PF00691 OmpA family DP_RS13530 PF13677 Membrane MotB of proton-channel complex MotA/MotB DP_RS13540 PF02154 Flagellar motor switch protein FliM DP_RS13540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DP_RS13545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DP_RS13555 PF00813 FliP family DP_RS13560 PF01313 Bacterial export proteins, family 3 DP_RS13565 PF01311 Bacterial export proteins, family 1 DP_RS13570 PF01312 FlhB HrpN YscU SpaS Family DP_RS13575 PF00771 FHIPEP family DP_RS13580 PF00448 SRP54-type protein, GTPase domain DP_RS13585 PF10609 NUBPL iron-transfer P-loop NTPase DP_RS13590 PF04542 Sigma-70 region 2 DP_RS13590 PF04539 Sigma-70 region 3 DP_RS13590 PF04545 Sigma-70, region 4 DP_RS13600 PF00460 Flagella basal body rod protein DP_RS13600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DP_RS13605 PF00460 Flagella basal body rod protein DP_RS13605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DP_RS13615 PF02107 Flagellar L-ring protein DP_RS13620 PF02119 Flagellar P-ring protein DP_RS13625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DP_RS13625 PF10135 Rod binding protein DP_RS13635 PF04316 Anti-sigma-28 factor, FlgM DP_RS13650 PF00669 Bacterial flagellin N-terminal helical region DP_RS13650 PF00700 Bacterial flagellin C-terminal helical region DP_RS13655 PF02599 Global regulator protein family DP_RS13660 PF02623 FliW protein DP_RS13665 PF00700 Bacterial flagellin C-terminal helical region DP_RS13665 PF00669 Bacterial flagellin N-terminal helical region DP_RS13680 PF10431 C-terminal, D2-small domain, of ClpB protein DP_RS13680 PF07724 AAA domain (Cdc48 subfamily) DP_RS13680 PF00004 ATPase family associated with various cellular activities (AAA) DP_RS13685 PF00227 Proteasome subunit DP_RS13695 PF02609 Exonuclease VII small subunit DP_RS13700 PF00348 Polyprenyl synthetase DP_RS13705 PF02779 Transketolase, pyrimidine binding domain DP_RS13705 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DP_RS13705 PF02780 Transketolase, C-terminal domain DP_RS13720 PF00107 Zinc-binding dehydrogenase DP_RS13720 PF08240 Alcohol dehydrogenase GroES-like domain DP_RS13735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS13735 PF00672 HAMP domain DP_RS13740 PF00881 Nitroreductase family DP_RS13750 PF01638 HxlR-like helix-turn-helix DP_RS13760 PF00440 Bacterial regulatory proteins, tetR family DP_RS13780 PF00990 Diguanylate cyclase, GGDEF domain DP_RS13780 PF07694 5TMR of 5TMR-LYT DP_RS13785 PF01370 NAD dependent epimerase/dehydratase family DP_RS13795 PF00902 Sec-independent protein translocase protein (TatC) DP_RS13800 PF01541 GIY-YIG catalytic domain DP_RS13805 PF00072 Response regulator receiver domain DP_RS13805 PF02954 Bacterial regulatory protein, Fis family DP_RS13805 PF00158 Sigma-54 interaction domain DP_RS13810 PF00989 PAS fold DP_RS13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS13810 PF00512 His Kinase A (phospho-acceptor) domain DP_RS13820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DP_RS13825 PF05175 Methyltransferase small domain DP_RS13825 PF17827 PrmC N-terminal domain DP_RS13830 PF03462 PCRF domain DP_RS13830 PF00472 RF-1 domain DP_RS13835 PF01197 Ribosomal protein L31 DP_RS13840 PF07498 Rho termination factor, N-terminal domain DP_RS13840 PF07497 Rho termination factor, RNA-binding domain DP_RS13840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DP_RS13845 PF01121 Dephospho-CoA kinase DP_RS13850 PF00849 RNA pseudouridylate synthase DP_RS13850 PF01479 S4 domain DP_RS13860 PF01195 Peptidyl-tRNA hydrolase DP_RS13865 PF01386 Ribosomal L25p family DP_RS13865 PF14693 Ribosomal protein TL5, C-terminal domain DP_RS13870 PF14572 Phosphoribosyl synthetase-associated domain DP_RS13870 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DP_RS13885 PF08544 GHMP kinases C terminal DP_RS13885 PF00288 GHMP kinases N terminal domain DP_RS13895 PF00749 tRNA synthetases class I (E and Q), catalytic domain DP_RS13900 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DP_RS13900 PF00749 tRNA synthetases class I (E and Q), catalytic domain DP_RS13915 PF00300 Histidine phosphatase superfamily (branch 1) DP_RS13920 PF01960 ArgJ family DP_RS13925 PF13396 Phospholipase_D-nuclease N-terminal DP_RS13925 PF13091 PLD-like domain DP_RS13930 PF03976 Polyphosphate kinase 2 (PPK2) DP_RS13935 PF04055 Radical SAM superfamily DP_RS13935 PF06969 HemN C-terminal domain DP_RS13940 PF03458 UPF0126 domain DP_RS13945 PF03605 Anaerobic c4-dicarboxylate membrane transporter DP_RS13955 PF16123 Hydroxyacylglutathione hydrolase C-terminus DP_RS13955 PF00753 Metallo-beta-lactamase superfamily DP_RS13965 PF07517 SecA DEAD-like domain DP_RS13965 PF07516 SecA Wing and Scaffold domain DP_RS13965 PF01043 SecA preprotein cross-linking domain DP_RS13965 PF02810 SEC-C motif DP_RS13975 PF05746 DALR anticodon binding domain DP_RS13975 PF03485 Arginyl tRNA synthetase N terminal domain DP_RS13975 PF00750 tRNA synthetases class I (R) DP_RS13980 PF01168 Alanine racemase, N-terminal domain DP_RS13980 PF00842 Alanine racemase, C-terminal domain DP_RS14000 PF00849 RNA pseudouridylate synthase DP_RS14000 PF01479 S4 domain DP_RS14015 PF13649 Methyltransferase domain DP_RS14020 PF07685 CobB/CobQ-like glutamine amidotransferase domain DP_RS14020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DP_RS14030 PF17757 UvrB interaction domain DP_RS14030 PF12344 Ultra-violet resistance protein B DP_RS14030 PF02151 UvrB/uvrC motif DP_RS14030 PF00271 Helicase conserved C-terminal domain DP_RS14030 PF04851 Type III restriction enzyme, res subunit DP_RS14035 PF01252 Signal peptidase (SPase) II DP_RS14040 PF01118 Semialdehyde dehydrogenase, NAD binding domain DP_RS14040 PF02774 Semialdehyde dehydrogenase, dimerisation domain DP_RS14045 PF00682 HMGL-like DP_RS14045 PF08502 LeuA allosteric (dimerisation) domain DP_RS14050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DP_RS14050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DP_RS14050 PF00205 Thiamine pyrophosphate enzyme, central domain DP_RS14055 PF10369 Small subunit of acetolactate synthase DP_RS14060 PF02666 Phosphatidylserine decarboxylase DP_RS14065 PF01066 CDP-alcohol phosphatidyltransferase DP_RS14075 PF01467 Cytidylyltransferase-like DP_RS14085 PF00025 ADP-ribosylation factor family DP_RS14095 PF01026 TatD related DNase DP_RS14100 PF01168 Alanine racemase, N-terminal domain DP_RS14110 PF00482 Type II secretion system (T2SS), protein F DP_RS14115 PF00216 Bacterial DNA-binding protein DP_RS14120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DP_RS14120 PF01872 RibD C-terminal domain DP_RS14125 PF03477 ATP cone domain DP_RS14130 PF02502 Ribose/Galactose Isomerase DP_RS14135 PF02801 Beta-ketoacyl synthase, C-terminal domain DP_RS14135 PF00109 Beta-ketoacyl synthase, N-terminal domain DP_RS14140 PF00550 Phosphopantetheine attachment site DP_RS14155 PF01012 Electron transfer flavoprotein domain DP_RS14160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DP_RS14160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DP_RS14175 PF01612 3'-5' exonuclease DP_RS14175 PF00570 HRDC domain DP_RS14185 PF02978 Signal peptide binding domain DP_RS14185 PF02881 SRP54-type protein, helical bundle domain DP_RS14185 PF00448 SRP54-type protein, GTPase domain DP_RS14190 PF00886 Ribosomal protein S16 DP_RS14200 PF05239 PRC-barrel domain DP_RS14200 PF01782 RimM N-terminal domain DP_RS14205 PF01746 tRNA (Guanine-1)-methyltransferase DP_RS14210 PF09936 SAM-dependent RNA methyltransferase DP_RS14210 PF01746 tRNA (Guanine-1)-methyltransferase DP_RS14215 PF01245 Ribosomal protein L19 DP_RS14220 PF01351 Ribonuclease HII DP_RS14225 PF02021 Uncharacterised protein family UPF0102 DP_RS14230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DP_RS14235 PF02223 Thymidylate kinase DP_RS14260 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DP_RS14265 PF13439 Glycosyltransferase Family 4 DP_RS14265 PF00534 Glycosyl transferases group 1 DP_RS14275 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DP_RS14285 PF00009 Elongation factor Tu GTP binding domain DP_RS14285 PF16658 Class II release factor RF3, C-terminal domain DP_RS14290 PF02001 Protein of unknown function DUF134 DP_RS14300 PF00512 His Kinase A (phospho-acceptor) domain DP_RS14300 PF00989 PAS fold DP_RS14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS14300 PF00672 HAMP domain DP_RS14305 PF00072 Response regulator receiver domain DP_RS14305 PF02954 Bacterial regulatory protein, Fis family DP_RS14305 PF00158 Sigma-54 interaction domain DP_RS14310 PF00490 Delta-aminolevulinic acid dehydratase DP_RS14320 PF07517 SecA DEAD-like domain DP_RS14320 PF02810 SEC-C motif DP_RS14320 PF01043 SecA preprotein cross-linking domain DP_RS14320 PF07516 SecA Wing and Scaffold domain DP_RS14325 PF00317 Ribonucleotide reductase, all-alpha domain DP_RS14325 PF02867 Ribonucleotide reductase, barrel domain DP_RS14325 PF03477 ATP cone domain DP_RS14340 PF00571 CBS domain DP_RS14340 PF00478 IMP dehydrogenase / GMP reductase domain DP_RS14345 PF00850 Histone deacetylase domain DP_RS14365 PF02321 Outer membrane efflux protein DP_RS14380 PF00873 AcrB/AcrD/AcrF family DP_RS14385 PF07690 Major Facilitator Superfamily DP_RS14390 PF04377 Arginine-tRNA-protein transferase, C terminus DP_RS14390 PF04376 Arginine-tRNA-protein transferase, N terminus DP_RS14395 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DP_RS14395 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DP_RS14410 PF12804 MobA-like NTP transferase domain DP_RS14415 PF02547 Queuosine biosynthesis protein DP_RS14425 PF02592 Putative vitamin uptake transporter DP_RS14435 PF00575 S1 RNA binding domain DP_RS14440 PF13350 Tyrosine phosphatase family DP_RS14445 PF13350 Tyrosine phosphatase family DP_RS14455 PF16325 Peptidase family U32 C-terminal domain DP_RS14455 PF01136 Peptidase family U32 DP_RS14465 PF01926 50S ribosome-binding GTPase DP_RS14475 PF00583 Acetyltransferase (GNAT) family DP_RS14480 PF07687 Peptidase dimerisation domain DP_RS14480 PF01546 Peptidase family M20/M25/M40 DP_RS14485 PF08032 RNA 2'-O ribose methyltransferase substrate binding DP_RS14485 PF00588 SpoU rRNA Methylase family DP_RS14490 PF00625 Guanylate kinase DP_RS14495 PF04025 Domain of unknown function (DUF370) DP_RS14500 PF08340 Domain of unknown function (DUF1732) DP_RS14500 PF03755 YicC-like family, N-terminal region DP_RS14510 PF00691 OmpA family DP_RS14525 PF01475 Ferric uptake regulator family DP_RS14535 PF01479 S4 domain DP_RS14535 PF00579 tRNA synthetases class I (W and Y) DP_RS14540 PF01966 HD domain DP_RS14540 PF00013 KH domain DP_RS14540 PF12072 Domain of unknown function (DUF3552) DP_RS14555 PF00293 NUDIX domain DP_RS14570 PF03631 Virulence factor BrkB DP_RS14580 PF02875 Mur ligase family, glutamate ligase domain DP_RS14580 PF08245 Mur ligase middle domain DP_RS14585 PF13361 UvrD-like helicase C-terminal domain DP_RS14585 PF00580 UvrD/REP helicase N-terminal domain DP_RS14595 PF01915 Glycosyl hydrolase family 3 C-terminal domain DP_RS14595 PF00933 Glycosyl hydrolase family 3 N terminal domain DP_RS14605 PF00072 Response regulator receiver domain DP_RS14605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS14605 PF00512 His Kinase A (phospho-acceptor) domain DP_RS14605 PF08448 PAS fold DP_RS14605 PF13188 PAS domain DP_RS14620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DP_RS14620 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DP_RS14620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DP_RS14620 PF10371 Domain of unknown function DP_RS14620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DP_RS14640 PF00072 Response regulator receiver domain DP_RS14645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DP_RS14645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DP_RS14645 PF04324 BFD-like [2Fe-2S] binding domain DP_RS14645 PF07992 Pyridine nucleotide-disulphide oxidoreductase DP_RS14645 PF18267 Rubredoxin NAD+ reductase C-terminal domain DP_RS14650 PF00989 PAS fold DP_RS14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS14650 PF00512 His Kinase A (phospho-acceptor) domain DP_RS14655 PF04055 Radical SAM superfamily DP_RS14655 PF00919 Uncharacterized protein family UPF0004 DP_RS14655 PF01938 TRAM domain DP_RS14660 PF12327 FtsZ family, C-terminal domain DP_RS14660 PF00091 Tubulin/FtsZ family, GTPase domain DP_RS14665 PF02491 SHS2 domain inserted in FTSA DP_RS14670 PF08478 POTRA domain, FtsQ-type DP_RS14670 PF03799 Cell division protein FtsQ DP_RS14675 PF01565 FAD binding domain DP_RS14675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DP_RS14680 PF08245 Mur ligase middle domain DP_RS14680 PF02875 Mur ligase family, glutamate ligase domain DP_RS14680 PF01225 Mur ligase family, catalytic domain DP_RS14685 PF04101 Glycosyltransferase family 28 C-terminal domain DP_RS14685 PF03033 Glycosyltransferase family 28 N-terminal domain DP_RS14690 PF08245 Mur ligase middle domain DP_RS14695 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DP_RS14695 PF00953 Glycosyl transferase family 4 DP_RS14700 PF01225 Mur ligase family, catalytic domain DP_RS14700 PF08245 Mur ligase middle domain DP_RS14700 PF02875 Mur ligase family, glutamate ligase domain DP_RS14715 PF01795 MraW methylase family DP_RS14720 PF02381 MraZ protein, putative antitoxin-like DP_RS14725 PF02548 Ketopantoate hydroxymethyltransferase DP_RS14730 PF01709 Transcriptional regulator DP_RS14735 PF01728 FtsJ-like methyltransferase DP_RS14740 PF01743 Poly A polymerase head domain DP_RS14740 PF01966 HD domain DP_RS14740 PF12627 Probable RNA and SrmB- binding site of polymerase A DP_RS14745 PF01207 Dihydrouridine synthase (Dus) DP_RS14755 PF00301 Rubredoxin DP_RS14765 PF01380 SIS domain DP_RS14770 PF00156 Phosphoribosyl transferase domain DP_RS14780 PF13167 GTP-binding GTPase N-terminal DP_RS14780 PF01926 50S ribosome-binding GTPase DP_RS14780 PF16360 GTP-binding GTPase Middle Region DP_RS14785 PF02540 NAD synthase DP_RS14785 PF00795 Carbon-nitrogen hydrolase DP_RS14790 PF02618 YceG-like family DP_RS14800 PF12804 MobA-like NTP transferase domain DP_RS14800 PF00132 Bacterial transferase hexapeptide (six repeats) DP_RS14805 PF01464 Transglycosylase SLT domain DP_RS14810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DP_RS14810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DP_RS14810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DP_RS14810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DP_RS14815 PF01050 Mannose-6-phosphate isomerase DP_RS14815 PF00483 Nucleotidyl transferase DP_RS14820 PF07690 Major Facilitator Superfamily DP_RS14825 PF01406 tRNA synthetases class I (C) catalytic domain DP_RS14825 PF09190 DALR domain DP_RS14830 PF01225 Mur ligase family, catalytic domain DP_RS14830 PF08245 Mur ligase middle domain DP_RS14830 PF02875 Mur ligase family, glutamate ligase domain DP_RS14845 PF00009 Elongation factor Tu GTP binding domain DP_RS14845 PF09106 Elongation factor SelB, winged helix DP_RS14845 PF09107 Elongation factor SelB, winged helix DP_RS14845 PF03144 Elongation factor Tu domain 2 DP_RS14850 PF00753 Metallo-beta-lactamase superfamily DP_RS14855 PF01883 Iron-sulfur cluster assembly protein DP_RS14855 PF10609 NUBPL iron-transfer P-loop NTPase DP_RS14860 PF02881 SRP54-type protein, helical bundle domain DP_RS14860 PF00448 SRP54-type protein, GTPase domain DP_RS14865 PF00226 DnaJ domain DP_RS14865 PF05099 Tellurite resistance protein TerB DP_RS14870 PF00155 Aminotransferase class I and II DP_RS14875 PF01926 50S ribosome-binding GTPase DP_RS14875 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DP_RS14885 PF00483 Nucleotidyl transferase DP_RS14895 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DP_RS14895 PF00132 Bacterial transferase hexapeptide (six repeats) DP_RS14900 PF07977 FabA-like domain DP_RS14905 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DP_RS14905 PF00132 Bacterial transferase hexapeptide (six repeats) DP_RS14910 PF07075 Protein of unknown function (DUF1343) DP_RS14915 PF01053 Cys/Met metabolism PLP-dependent enzyme DP_RS14920 PF00291 Pyridoxal-phosphate dependent enzyme DP_RS14925 PF08668 HDOD domain DP_RS14925 PF00563 EAL domain DP_RS14930 PF08448 PAS fold DP_RS14930 PF00990 Diguanylate cyclase, GGDEF domain DP_RS14940 PF16325 Peptidase family U32 C-terminal domain DP_RS14940 PF01136 Peptidase family U32 DP_RS14950 PF00919 Uncharacterized protein family UPF0004 DP_RS14950 PF04055 Radical SAM superfamily DP_RS14955 PF02464 Competence-damaged protein DP_RS14955 PF00994 Probable molybdopterin binding domain DP_RS14955 PF18146 Damage-inducible protein CinA KH domain DP_RS14965 PF00154 recA bacterial DNA recombination protein DP_RS14970 PF01037 Lrp/AsnC ligand binding domain DP_RS14975 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DP_RS14975 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DP_RS14985 PF00924 Mechanosensitive ion channel DP_RS14985 PF12794 Mechanosensitive ion channel inner membrane domain 1 DP_RS14985 PF12795 Mechanosensitive ion channel porin domain DP_RS14990 PF05992 SbmA/BacA-like family DP_RS15000 PF02926 THUMP domain DP_RS15000 PF02568 Thiamine biosynthesis protein (ThiI) DP_RS15005 PF01325 Iron dependent repressor, N-terminal DNA binding domain DP_RS15005 PF02742 Iron dependent repressor, metal binding and dimerisation domain DP_RS15050 PF02472 Biopolymer transport protein ExbD/TolR DP_RS15055 PF01618 MotA/TolQ/ExbB proton channel family DP_RS15080 PF00005 ABC transporter DP_RS15085 PF01032 FecCD transport family DP_RS15090 PF01497 Periplasmic binding protein DP_RS15095 PF07715 TonB-dependent Receptor Plug Domain DP_RS15095 PF00593 TonB dependent receptor DP_RS15115 PF00384 Molybdopterin oxidoreductase DP_RS15115 PF01568 Molydopterin dinucleotide binding domain DP_RS15115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS15120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DP_RS15120 PF00384 Molybdopterin oxidoreductase DP_RS15120 PF01568 Molydopterin dinucleotide binding domain DP_RS15125 PF13247 4Fe-4S dicluster domain DP_RS15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DP_RS15135 PF03459 TOBE domain DP_RS15140 PF00994 Probable molybdopterin binding domain DP_RS15140 PF03454 MoeA C-terminal region (domain IV) DP_RS15140 PF03453 MoeA N-terminal region (domain I and II) DP_RS15145 PF04055 Radical SAM superfamily DP_RS15145 PF06463 Molybdenum Cofactor Synthesis C DP_RS15160 PF03797 Autotransporter beta-domain DP_RS15160 PF00657 GDSL-like Lipase/Acylhydrolase DP_RS15205 PF00199 Catalase DP_RS15205 PF06628 Catalase-related immune-responsive DP_RS15210 PF02754 Cysteine-rich domain DP_RS15215 PF11870 Domain of unknown function (DUF3390) DP_RS15215 PF13183 4Fe-4S dicluster domain DP_RS15215 PF02589 LUD domain DP_RS15220 PF02589 LUD domain DP_RS15235 PF04453 LPS transport system D DP_RS15235 PF03968 OstA-like protein DP_RS15240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DP_RS15245 PF08501 Shikimate dehydrogenase substrate binding domain DP_RS15245 PF01488 Shikimate / quinate 5-dehydrogenase DP_RS15245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DP_RS15250 PF01487 Type I 3-dehydroquinase DP_RS15260 PF01180 Dihydroorotate dehydrogenase DP_RS15265 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DP_RS15270 PF01478 Type IV leader peptidase family DP_RS15270 PF06750 Bacterial Peptidase A24 N-terminal domain DP_RS15275 PF03061 Thioesterase superfamily DP_RS15290 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DP_RS15305 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DP_RS15305 PF18381 YcaO cyclodehydratase C-terminal domain DP_RS15310 PF01479 S4 domain DP_RS15310 PF00849 RNA pseudouridylate synthase DP_RS15315 PF01926 50S ribosome-binding GTPase DP_RS15315 PF04055 Radical SAM superfamily DP_RS15315 PF01018 GTP1/OBG DP_RS15320 PF04055 Radical SAM superfamily DP_RS15325 PF02901 Pyruvate formate lyase-like DP_RS15325 PF01228 Glycine radical DP_RS15330 PF00171 Aldehyde dehydrogenase family DP_RS15335 PF03319 Ethanolamine utilisation protein EutN/carboxysome DP_RS15340 PF00936 BMC domain DP_RS15345 PF00936 BMC domain DP_RS15345 PF16365 Ethanolamine utilization protein EutK C-terminus DP_RS15355 PF10531 SLBB domain DP_RS15355 PF13237 4Fe-4S dicluster domain DP_RS15355 PF13375 RnfC Barrel sandwich hybrid domain DP_RS15355 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DP_RS15360 PF00936 BMC domain DP_RS15365 PF01515 Phosphate acetyl/butaryl transferase DP_RS15385 PF00171 Aldehyde dehydrogenase family DP_RS15390 PF03319 Ethanolamine utilisation protein EutN/carboxysome DP_RS15395 PF00936 BMC domain DP_RS15400 PF16365 Ethanolamine utilization protein EutK C-terminus DP_RS15400 PF00936 BMC domain DP_RS15410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DP_RS15410 PF13375 RnfC Barrel sandwich hybrid domain DP_RS15410 PF10531 SLBB domain DP_RS15410 PF13237 4Fe-4S dicluster domain DP_RS15415 PF00936 BMC domain DP_RS15440 PF01012 Electron transfer flavoprotein domain DP_RS15445 PF13237 4Fe-4S dicluster domain DP_RS15445 PF01012 Electron transfer flavoprotein domain DP_RS15445 PF00766 Electron transfer flavoprotein FAD-binding domain DP_RS15450 PF02665 Nitrate reductase gamma subunit DP_RS15450 PF02754 Cysteine-rich domain DP_RS15450 PF13183 4Fe-4S dicluster domain DP_RS15455 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DP_RS15455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DP_RS15460 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS15465 PF03480 Bacterial extracellular solute-binding protein, family 7 DP_RS15470 PF02954 Bacterial regulatory protein, Fis family DP_RS15470 PF00158 Sigma-54 interaction domain DP_RS15470 PF13426 PAS domain DP_RS15480 PF01264 Chorismate synthase DP_RS15485 PF00654 Voltage gated chloride channel DP_RS15495 PF00005 ABC transporter DP_RS15500 PF00950 ABC 3 transport family DP_RS15505 PF12804 MobA-like NTP transferase domain DP_RS15515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DP_RS15515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DP_RS15520 PF01799 [2Fe-2S] binding domain DP_RS15520 PF00111 2Fe-2S iron-sulfur cluster binding domain DP_RS15565 PF11818 C-terminal domain of tail specific protease (DUF3340) DP_RS15565 PF17804 Tail specific protease N-terminal domain DP_RS15565 PF03572 Peptidase family S41 DP_RS15565 PF00595 PDZ domain DP_RS15575 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DP_RS15575 PF01488 Shikimate / quinate 5-dehydrogenase DP_RS15575 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DP_RS15580 PF01578 Cytochrome C assembly protein DP_RS15585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DP_RS15585 PF10414 Sirohaem synthase dimerisation region DP_RS15585 PF14824 Sirohaem biosynthesis protein central DP_RS15600 PF00639 PPIC-type PPIASE domain DP_RS15600 PF09312 SurA N-terminal domain DP_RS15610 PF02237 Biotin protein ligase C terminal domain DP_RS15610 PF03099 Biotin/lipoate A/B protein ligase family DP_RS15630 PF13649 Methyltransferase domain DP_RS15635 PF08003 Protein of unknown function (DUF1698) DP_RS15640 PF01209 ubiE/COQ5 methyltransferase family DP_RS15655 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DP_RS15655 PF00117 Glutamine amidotransferase class-I DP_RS15660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DP_RS15660 PF02142 MGS-like domain DP_RS15660 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DP_RS15665 PF01434 Peptidase family M41 DP_RS15665 PF17862 AAA+ lid domain DP_RS15665 PF00004 ATPase family associated with various cellular activities (AAA) DP_RS15665 PF06480 FtsH Extracellular DP_RS15670 PF00809 Pterin binding enzyme DP_RS15675 PF02683 Cytochrome C biogenesis protein transmembrane region DP_RS15685 PF02653 Branched-chain amino acid transport system / permease component DP_RS15690 PF00005 ABC transporter DP_RS15695 PF02146 Sir2 family DP_RS15720 PF00849 RNA pseudouridylate synthase DP_RS15725 PF08448 PAS fold DP_RS15725 PF08447 PAS fold DP_RS15725 PF00563 EAL domain DP_RS15725 PF00990 Diguanylate cyclase, GGDEF domain DP_RS15750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DP_RS15750 PF05697 Bacterial trigger factor protein (TF) DP_RS15750 PF05698 Bacterial trigger factor protein (TF) C-terminus DP_RS15755 PF00224 Pyruvate kinase, barrel domain DP_RS15755 PF02887 Pyruvate kinase, alpha/beta domain DP_RS15755 PF00391 PEP-utilising enzyme, mobile domain DP_RS15765 PF00472 RF-1 domain DP_RS15820 PF04480 Protein of unknown function (DUF559) DP_RS16015 PF02719 Polysaccharide biosynthesis protein DP_RS16340 PF00679 Elongation factor G C-terminus DP_RS16340 PF03764 Elongation factor G, domain IV DP_RS16340 PF00009 Elongation factor Tu GTP binding domain DP_RS16340 PF03144 Elongation factor Tu domain 2 DP_RS16340 PF14492 Elongation Factor G, domain II DP_RS16395 PF00535 Glycosyl transferase family 2 DP_RS16410 PF00535 Glycosyl transferase family 2 DP_RS16415 PF00990 Diguanylate cyclase, GGDEF domain DP_RS16445 PF00990 Diguanylate cyclase, GGDEF domain DP_RS16455 PF13180 PDZ domain DP_RS16460 PF00005 ABC transporter DP_RS16470 PF00512 His Kinase A (phospho-acceptor) domain DP_RS16470 PF00072 Response regulator receiver domain DP_RS16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS16470 PF01627 Hpt domain DP_RS16480 PF00672 HAMP domain DP_RS16480 PF01966 HD domain DP_RS16485 PF01966 HD domain DP_RS16485 PF00672 HAMP domain DP_RS16530 PF00672 HAMP domain DP_RS16530 PF16591 Helical bimodular sensor domain DP_RS16530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16535 PF00672 HAMP domain DP_RS16535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16540 PF02743 Cache domain DP_RS16540 PF00672 HAMP domain DP_RS16545 PF01743 Poly A polymerase head domain DP_RS16545 PF12626 Polymerase A arginine-rich C-terminus DP_RS16545 PF12627 Probable RNA and SrmB- binding site of polymerase A DP_RS16580 PF04452 RNA methyltransferase DP_RS16585 PF04452 RNA methyltransferase DP_RS16610 PF00691 OmpA family DP_RS16615 PF02508 Rnf-Nqr subunit, membrane protein DP_RS16620 PF09115 DNA polymerase III, delta subunit, C terminal DP_RS16630 PF00140 Sigma-70 factor, region 1.2 DP_RS16630 PF04542 Sigma-70 region 2 DP_RS16630 PF04539 Sigma-70 region 3 DP_RS16630 PF04545 Sigma-70, region 4 DP_RS16630 PF04546 Sigma-70, non-essential region DP_RS16630 PF03979 Sigma-70 factor, region 1.1 DP_RS16640 PF00465 Iron-containing alcohol dehydrogenase DP_RS16645 PF00465 Iron-containing alcohol dehydrogenase DP_RS16650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16650 PF02743 Cache domain DP_RS16650 PF00672 HAMP domain DP_RS16655 PF02743 Cache domain DP_RS16655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16655 PF00672 HAMP domain DP_RS16660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16660 PF00672 HAMP domain DP_RS16660 PF02743 Cache domain DP_RS16665 PF01476 LysM domain DP_RS16665 PF08525 Opacity-associated protein A N-terminal motif DP_RS16665 PF01551 Peptidase family M23 DP_RS16670 PF00924 Mechanosensitive ion channel DP_RS16675 PF13419 Haloacid dehalogenase-like hydrolase DP_RS16680 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DP_RS16685 PF00691 OmpA family DP_RS16690 PF01464 Transglycosylase SLT domain DP_RS16695 PF00581 Rhodanese-like domain DP_RS16700 PF07729 FCD domain DP_RS16700 PF00392 Bacterial regulatory proteins, gntR family DP_RS16740 PF00072 Response regulator receiver domain DP_RS16740 PF08448 PAS fold DP_RS16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS16740 PF00512 His Kinase A (phospho-acceptor) domain DP_RS16740 PF13188 PAS domain DP_RS16745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS16745 PF08448 PAS fold DP_RS16745 PF13188 PAS domain DP_RS16745 PF00072 Response regulator receiver domain DP_RS16745 PF00512 His Kinase A (phospho-acceptor) domain DP_RS16760 PF01048 Phosphorylase superfamily DP_RS16790 PF01136 Peptidase family U32 DP_RS16805 PF13419 Haloacid dehalogenase-like hydrolase DP_RS16830 PF00924 Mechanosensitive ion channel DP_RS16840 PF00486 Transcriptional regulatory protein, C terminal DP_RS16840 PF00072 Response regulator receiver domain DP_RS16850 PF07977 FabA-like domain DP_RS16865 PF07228 Stage II sporulation protein E (SpoIIE) DP_RS16865 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DP_RS16870 PF00672 HAMP domain DP_RS16870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16875 PF00672 HAMP domain DP_RS16880 PF08269 Cache domain DP_RS16880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS16885 PF00512 His Kinase A (phospho-acceptor) domain DP_RS16885 PF08448 PAS fold DP_RS16885 PF13188 PAS domain DP_RS16885 PF00072 Response regulator receiver domain DP_RS16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS16890 PF00072 Response regulator receiver domain DP_RS16890 PF13188 PAS domain DP_RS16890 PF00512 His Kinase A (phospho-acceptor) domain DP_RS16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS16890 PF08448 PAS fold DP_RS16895 PF00072 Response regulator receiver domain DP_RS16895 PF00512 His Kinase A (phospho-acceptor) domain DP_RS16895 PF08448 PAS fold DP_RS16895 PF13188 PAS domain DP_RS16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS16905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS16905 PF08448 PAS fold DP_RS16905 PF08447 PAS fold DP_RS16910 PF00300 Histidine phosphatase superfamily (branch 1) DP_RS16915 PF08676 MutL C terminal dimerisation domain DP_RS16915 PF01119 DNA mismatch repair protein, C-terminal domain DP_RS16920 PF01119 DNA mismatch repair protein, C-terminal domain DP_RS16920 PF08676 MutL C terminal dimerisation domain DP_RS16950 PF01726 LexA DNA binding domain DP_RS16950 PF00717 Peptidase S24-like DP_RS16960 PF00990 Diguanylate cyclase, GGDEF domain DP_RS16960 PF08448 PAS fold DP_RS16965 PF00665 Integrase core domain DP_RS16965 PF13333 Integrase core domain DP_RS16965 PF13276 HTH-like domain DP_RS16975 PF10137 Predicted nucleotide-binding protein containing TIR-like domain DP_RS16980 PF00962 Adenosine/AMP deaminase DP_RS16990 PF01170 Putative RNA methylase family UPF0020 DP_RS16990 PF02926 THUMP domain DP_RS16990 PF10672 S-adenosylmethionine-dependent methyltransferase DP_RS16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS16995 PF00512 His Kinase A (phospho-acceptor) domain DP_RS16995 PF00072 Response regulator receiver domain DP_RS16995 PF01627 Hpt domain DP_RS16995 PF00672 HAMP domain DP_RS16995 PF17149 Periplasmic sensor domain found in signal transduction proteins DP_RS17000 PF00990 Diguanylate cyclase, GGDEF domain DP_RS17000 PF08448 PAS fold DP_RS17035 PF08448 PAS fold DP_RS17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS17035 PF00072 Response regulator receiver domain DP_RS17035 PF00512 His Kinase A (phospho-acceptor) domain DP_RS17035 PF13188 PAS domain DP_RS17040 PF03781 Sulfatase-modifying factor enzyme 1 DP_RS17040 PF00069 Protein kinase domain DP_RS17060 PF00069 Protein kinase domain DP_RS17060 PF03793 PASTA domain DP_RS17070 PF01467 Cytidylyltransferase-like DP_RS17085 PF00460 Flagella basal body rod protein DP_RS17085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DP_RS17085 PF07559 Flagellar basal body protein FlaE DP_RS17105 PF00990 Diguanylate cyclase, GGDEF domain DP_RS17125 PF01012 Electron transfer flavoprotein domain DP_RS17125 PF00766 Electron transfer flavoprotein FAD-binding domain DP_RS17145 PF11734 TilS substrate C-terminal domain DP_RS17145 PF01171 PP-loop family DP_RS17160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DP_RS17160 PF00672 HAMP domain DP_RS17160 PF02743 Cache domain DP_RS17165 PF12111 Polyribonucleotide phosphorylase C terminal DP_RS17165 PF00575 S1 RNA binding domain DP_RS17165 PF10150 Ribonuclease E/G family DP_RS17180 PF08448 PAS fold DP_RS17180 PF00512 His Kinase A (phospho-acceptor) domain DP_RS17180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DP_RS17180 PF00072 Response regulator receiver domain DP_RS17180 PF13188 PAS domain