locus-tag class description DAES_RS00010 PF13614 AAA domain DAES_RS00020 PF02195 ParB-like nuclease domain DAES_RS00020 PF17762 HTH domain found in ParB protein DAES_RS00025 PF00294 pfkB family carbohydrate kinase DAES_RS00025 PF01467 Cytidylyltransferase-like DAES_RS00030 PF00365 Phosphofructokinase DAES_RS00040 PF12728 Helix-turn-helix domain DAES_RS00045 PF08241 Methyltransferase domain DAES_RS00065 PF00731 AIR carboxylase DAES_RS00070 PF01969 Protein of unknown function DUF111 DAES_RS00080 PF02687 FtsX-like permease family DAES_RS00080 PF12704 MacB-like periplasmic core domain DAES_RS00080 PF00005 ABC transporter DAES_RS00100 PF00873 AcrB/AcrD/AcrF family DAES_RS00120 PF11849 Domain of unknown function (DUF3369) DAES_RS00130 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS00130 PF00072 Response regulator receiver domain DAES_RS00135 PF11871 Domain of unknown function (DUF3391) DAES_RS00135 PF01966 HD domain DAES_RS00140 PF00535 Glycosyl transferase family 2 DAES_RS00155 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00155 PF00989 PAS fold DAES_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00160 PF00465 Iron-containing alcohol dehydrogenase DAES_RS00165 PF18415 Histidine kinase receptor ArcB trans-membrane domain DAES_RS00165 PF01627 Hpt domain DAES_RS00165 PF00072 Response regulator receiver domain DAES_RS00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00165 PF00989 PAS fold DAES_RS00165 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00170 PF03063 Prismane/CO dehydrogenase family DAES_RS00180 PF00672 HAMP domain DAES_RS00180 PF01966 HD domain DAES_RS00190 PF08668 HDOD domain DAES_RS00190 PF00563 EAL domain DAES_RS00195 PF01177 Asp/Glu/Hydantoin racemase DAES_RS00210 PF10369 Small subunit of acetolactate synthase DAES_RS00215 PF01515 Phosphate acetyl/butaryl transferase DAES_RS00220 PF00871 Acetokinase family DAES_RS00225 PF03705 CheR methyltransferase, all-alpha domain DAES_RS00225 PF01739 CheR methyltransferase, SAM binding domain DAES_RS00250 PF04536 TPM domain DAES_RS00255 PF04011 LemA family DAES_RS00270 PF01810 LysE type translocator DAES_RS00275 PF03466 LysR substrate binding domain DAES_RS00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DAES_RS00280 PF00155 Aminotransferase class I and II DAES_RS00280 PF00392 Bacterial regulatory proteins, gntR family DAES_RS00290 PF10415 Fumarase C C-terminus DAES_RS00290 PF00206 Lyase DAES_RS00305 PF00072 Response regulator receiver domain DAES_RS00315 PF00072 Response regulator receiver domain DAES_RS00315 PF00486 Transcriptional regulatory protein, C terminal DAES_RS00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00320 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00320 PF00989 PAS fold DAES_RS00320 PF13188 PAS domain DAES_RS00320 PF13426 PAS domain DAES_RS00325 PF00486 Transcriptional regulatory protein, C terminal DAES_RS00325 PF00072 Response regulator receiver domain DAES_RS00330 PF01740 STAS domain DAES_RS00330 PF00916 Sulfate permease family DAES_RS00335 PF00440 Bacterial regulatory proteins, tetR family DAES_RS00335 PF08360 QacR-like protein, C-terminal region DAES_RS00350 PF03441 FAD binding domain of DNA photolyase DAES_RS00350 PF00875 DNA photolyase DAES_RS00360 PF01370 NAD dependent epimerase/dehydratase family DAES_RS00370 PF08544 GHMP kinases C terminal DAES_RS00370 PF00288 GHMP kinases N terminal domain DAES_RS00375 PF00456 Transketolase, thiamine diphosphate binding domain DAES_RS00380 PF02780 Transketolase, C-terminal domain DAES_RS00380 PF02779 Transketolase, pyrimidine binding domain DAES_RS00385 PF01370 NAD dependent epimerase/dehydratase family DAES_RS00390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DAES_RS00395 PF04055 Radical SAM superfamily DAES_RS00395 PF18693 TRAM domain DAES_RS00395 PF00919 Uncharacterized protein family UPF0004 DAES_RS00405 PF09335 SNARE associated Golgi protein DAES_RS00420 PF01814 Hemerythrin HHE cation binding domain DAES_RS00435 PF08241 Methyltransferase domain DAES_RS00440 PF00535 Glycosyl transferase family 2 DAES_RS00500 PF03328 HpcH/HpaI aldolase/citrate lyase family DAES_RS00505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DAES_RS00505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DAES_RS00505 PF01842 ACT domain DAES_RS00510 PF16363 GDP-mannose 4,6 dehydratase DAES_RS00520 PF02348 Cytidylyltransferase DAES_RS00525 PF00535 Glycosyl transferase family 2 DAES_RS00530 PF16363 GDP-mannose 4,6 dehydratase DAES_RS00545 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00545 PF01627 Hpt domain DAES_RS00545 PF00672 HAMP domain DAES_RS00545 PF00072 Response regulator receiver domain DAES_RS00545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DAES_RS00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00550 PF12762 ISXO2-like transposase domain DAES_RS00555 PF01609 Transposase DDE domain DAES_RS00555 PF13808 DDE_Tnp_1-associated DAES_RS00560 PF00672 HAMP domain DAES_RS00560 PF16591 Helical bimodular sensor domain DAES_RS00560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS00565 PF09308 LuxQ, periplasmic DAES_RS00565 PF00072 Response regulator receiver domain DAES_RS00565 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00570 PF00072 Response regulator receiver domain DAES_RS00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00570 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00570 PF08448 PAS fold DAES_RS00570 PF13188 PAS domain DAES_RS00575 PF00072 Response regulator receiver domain DAES_RS00575 PF00158 Sigma-54 interaction domain DAES_RS00575 PF02954 Bacterial regulatory protein, Fis family DAES_RS00580 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00585 PF00072 Response regulator receiver domain DAES_RS00585 PF00486 Transcriptional regulatory protein, C terminal DAES_RS00590 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DAES_RS00590 PF00391 PEP-utilising enzyme, mobile domain DAES_RS00595 PF00158 Sigma-54 interaction domain DAES_RS00595 PF00072 Response regulator receiver domain DAES_RS00595 PF02954 Bacterial regulatory protein, Fis family DAES_RS00600 PF00582 Universal stress protein family DAES_RS00610 PF01925 Sulfite exporter TauE/SafE DAES_RS00630 PF00072 Response regulator receiver domain DAES_RS00630 PF00486 Transcriptional regulatory protein, C terminal DAES_RS00635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DAES_RS00635 PF00391 PEP-utilising enzyme, mobile domain DAES_RS00640 PF12762 ISXO2-like transposase domain DAES_RS00645 PF06827 Zinc finger found in FPG and IleRS DAES_RS00645 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DAES_RS00645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DAES_RS00650 PF03023 Lipid II flippase MurJ DAES_RS00655 PF05175 Methyltransferase small domain DAES_RS00695 PF18075 FtsX extracellular domain DAES_RS00700 PF00005 ABC transporter DAES_RS00705 PF17674 HHH domain DAES_RS00705 PF16921 Tex protein YqgF-like domain DAES_RS00705 PF09371 Tex-like protein N-terminal domain DAES_RS00705 PF00575 S1 RNA binding domain DAES_RS00720 PF00672 HAMP domain DAES_RS00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00720 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00720 PF00989 PAS fold DAES_RS00725 PF08338 Domain of unknown function (DUF1731) DAES_RS00725 PF01370 NAD dependent epimerase/dehydratase family DAES_RS00730 PF00158 Sigma-54 interaction domain DAES_RS00730 PF00072 Response regulator receiver domain DAES_RS00730 PF02954 Bacterial regulatory protein, Fis family DAES_RS00740 PF02146 Sir2 family DAES_RS00745 PF00085 Thioredoxin DAES_RS00765 PF00571 CBS domain DAES_RS00775 PF13188 PAS domain DAES_RS00775 PF00072 Response regulator receiver domain DAES_RS00775 PF08448 PAS fold DAES_RS00775 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS00780 PF02954 Bacterial regulatory protein, Fis family DAES_RS00780 PF00158 Sigma-54 interaction domain DAES_RS00780 PF00072 Response regulator receiver domain DAES_RS00785 PF00578 AhpC/TSA family DAES_RS00795 PF13247 4Fe-4S dicluster domain DAES_RS00800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DAES_RS00800 PF00384 Molybdopterin oxidoreductase DAES_RS00800 PF01568 Molydopterin dinucleotide binding domain DAES_RS00805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DAES_RS00805 PF00384 Molybdopterin oxidoreductase DAES_RS00805 PF01568 Molydopterin dinucleotide binding domain DAES_RS00820 PF03454 MoeA C-terminal region (domain IV) DAES_RS00820 PF00994 Probable molybdopterin binding domain DAES_RS00820 PF03453 MoeA N-terminal region (domain I and II) DAES_RS00825 PF02634 FdhD/NarQ family DAES_RS00830 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DAES_RS00835 PF12804 MobA-like NTP transferase domain DAES_RS00840 PF12146 Serine aminopeptidase, S33 DAES_RS00855 PF00873 AcrB/AcrD/AcrF family DAES_RS00860 PF01596 O-methyltransferase DAES_RS00865 PF04055 Radical SAM superfamily DAES_RS00865 PF01926 50S ribosome-binding GTPase DAES_RS00865 PF01018 GTP1/OBG DAES_RS00870 PF12111 Polyribonucleotide phosphorylase C terminal DAES_RS00870 PF10150 Ribonuclease E/G family DAES_RS00870 PF00575 S1 RNA binding domain DAES_RS00875 PF02677 Epoxyqueuosine reductase QueH DAES_RS00885 PF04055 Radical SAM superfamily DAES_RS00895 PF00075 RNase H DAES_RS00910 PF02687 FtsX-like permease family DAES_RS00910 PF12704 MacB-like periplasmic core domain DAES_RS00910 PF00005 ABC transporter DAES_RS00915 PF02687 FtsX-like permease family DAES_RS00915 PF12704 MacB-like periplasmic core domain DAES_RS00915 PF00005 ABC transporter DAES_RS00920 PF13533 Biotin-lipoyl like DAES_RS00930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DAES_RS00930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DAES_RS00930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DAES_RS00930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DAES_RS00935 PF01145 SPFH domain / Band 7 family DAES_RS00935 PF12221 Bacterial membrane protein N terminal DAES_RS00940 PF01145 SPFH domain / Band 7 family DAES_RS00950 PF02548 Ketopantoate hydroxymethyltransferase DAES_RS00975 PF13439 Glycosyltransferase Family 4 DAES_RS00975 PF00534 Glycosyl transferases group 1 DAES_RS00980 PF00583 Acetyltransferase (GNAT) family DAES_RS00980 PF13380 CoA binding domain DAES_RS00980 PF13607 Succinyl-CoA ligase like flavodoxin domain DAES_RS00990 PF13193 AMP-binding enzyme C-terminal domain DAES_RS00990 PF00501 AMP-binding enzyme DAES_RS00990 PF16177 Acetyl-coenzyme A synthetase N-terminus DAES_RS00995 PF01584 CheW-like domain DAES_RS01000 PF00672 HAMP domain DAES_RS01000 PF02743 Cache domain DAES_RS01000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS01005 PF01979 Amidohydrolase family DAES_RS01010 PF00563 EAL domain DAES_RS01010 PF08668 HDOD domain DAES_RS01015 PF01791 DeoC/LacD family aldolase DAES_RS01055 PF01613 Flavin reductase like domain DAES_RS01065 PF12729 Four helix bundle sensory module for signal transduction DAES_RS01065 PF00672 HAMP domain DAES_RS01065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS01070 PF01966 HD domain DAES_RS01080 PF00069 Protein kinase domain DAES_RS01090 PF01476 LysM domain DAES_RS01090 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DAES_RS01095 PF01026 TatD related DNase DAES_RS01105 PF00892 EamA-like transporter family DAES_RS01115 PF01321 Creatinase/Prolidase N-terminal domain DAES_RS01115 PF00557 Metallopeptidase family M24 DAES_RS01120 PF04055 Radical SAM superfamily DAES_RS01125 PF00270 DEAD/DEAH box helicase DAES_RS01125 PF00271 Helicase conserved C-terminal domain DAES_RS01125 PF16124 RecQ zinc-binding DAES_RS01125 PF09382 RQC domain DAES_RS01125 PF00570 HRDC domain DAES_RS01140 PF02911 Formyl transferase, C-terminal domain DAES_RS01140 PF00551 Formyl transferase DAES_RS01145 PF01327 Polypeptide deformylase DAES_RS01150 PF01336 OB-fold nucleic acid binding domain DAES_RS01150 PF00152 tRNA synthetases class II (D, K and N) DAES_RS01150 PF02938 GAD domain DAES_RS01155 PF13393 Histidyl-tRNA synthetase DAES_RS01155 PF03129 Anticodon binding domain DAES_RS01160 PF01568 Molydopterin dinucleotide binding domain DAES_RS01160 PF00384 Molybdopterin oxidoreductase DAES_RS01160 PF00037 4Fe-4S binding domain DAES_RS01160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DAES_RS01160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DAES_RS01170 PF02653 Branched-chain amino acid transport system / permease component DAES_RS01175 PF00005 ABC transporter DAES_RS01180 PF02608 ABC transporter substrate-binding protein PnrA-like DAES_RS01185 PF00183 Hsp90 protein DAES_RS01200 PF00850 Histone deacetylase domain DAES_RS01240 PF01131 DNA topoisomerase DAES_RS01240 PF01751 Toprim domain DAES_RS01240 PF01396 Topoisomerase DNA binding C4 zinc finger DAES_RS01245 PF00535 Glycosyl transferase family 2 DAES_RS01250 PF01168 Alanine racemase, N-terminal domain DAES_RS01255 PF01618 MotA/TolQ/ExbB proton channel family DAES_RS01260 PF13677 Membrane MotB of proton-channel complex MotA/MotB DAES_RS01260 PF00691 OmpA family DAES_RS01265 PF13677 Membrane MotB of proton-channel complex MotA/MotB DAES_RS01265 PF00691 OmpA family DAES_RS01275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DAES_RS01285 PF00813 FliP family DAES_RS01290 PF01313 Bacterial export proteins, family 3 DAES_RS01295 PF05362 Lon protease (S16) C-terminal proteolytic domain DAES_RS01295 PF13654 AAA domain DAES_RS01305 PF02590 Predicted SPOUT methyltransferase DAES_RS01320 PF02527 rRNA small subunit methyltransferase G DAES_RS01325 PF07228 Stage II sporulation protein E (SpoIIE) DAES_RS01325 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DAES_RS01345 PF00155 Aminotransferase class I and II DAES_RS01350 PF02592 Putative vitamin uptake transporter DAES_RS01360 PF00750 tRNA synthetases class I (R) DAES_RS01360 PF05746 DALR anticodon binding domain DAES_RS01360 PF03485 Arginyl tRNA synthetase N terminal domain DAES_RS01380 PF00155 Aminotransferase class I and II DAES_RS01380 PF00392 Bacterial regulatory proteins, gntR family DAES_RS01390 PF18073 Rubredoxin metal binding domain DAES_RS01390 PF06745 KaiC DAES_RS01395 PF00342 Phosphoglucose isomerase DAES_RS01400 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS01425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DAES_RS01430 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS01435 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS01440 PF00005 ABC transporter DAES_RS01440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DAES_RS01445 PF00005 ABC transporter DAES_RS01450 PF01926 50S ribosome-binding GTPase DAES_RS01450 PF12631 MnmE helical domain DAES_RS01450 PF10396 GTP-binding protein TrmE N-terminus DAES_RS01455 PF06968 Biotin and Thiamin Synthesis associated domain DAES_RS01455 PF04055 Radical SAM superfamily DAES_RS01465 PF00206 Lyase DAES_RS01465 PF10415 Fumarase C C-terminus DAES_RS01485 PF00037 4Fe-4S binding domain DAES_RS01485 PF02906 Iron only hydrogenase large subunit, C-terminal domain DAES_RS01490 PF12833 Helix-turn-helix domain DAES_RS01495 PF00892 EamA-like transporter family DAES_RS01500 PF00892 EamA-like transporter family DAES_RS01525 PF03033 Glycosyltransferase family 28 N-terminal domain DAES_RS01525 PF04101 Glycosyltransferase family 28 C-terminal domain DAES_RS01530 PF13439 Glycosyltransferase Family 4 DAES_RS01530 PF00534 Glycosyl transferases group 1 DAES_RS01540 PF01784 NIF3 (NGG1p interacting factor 3) DAES_RS01550 PF02542 YgbB family DAES_RS01550 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DAES_RS01560 PF01406 tRNA synthetases class I (C) catalytic domain DAES_RS01560 PF09190 DALR domain DAES_RS01645 PF01207 Dihydrouridine synthase (Dus) DAES_RS01655 PF00892 EamA-like transporter family DAES_RS01700 PF03707 Bacterial signalling protein N terminal repeat DAES_RS01700 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS01700 PF00563 EAL domain DAES_RS01705 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS01705 PF00563 EAL domain DAES_RS01705 PF05231 MASE1 DAES_RS01705 PF08447 PAS fold DAES_RS01705 PF08448 PAS fold DAES_RS01705 PF13426 PAS domain DAES_RS01730 PF00881 Nitroreductase family DAES_RS01745 PF03306 Alpha-acetolactate decarboxylase DAES_RS01750 PF13439 Glycosyltransferase Family 4 DAES_RS01750 PF00534 Glycosyl transferases group 1 DAES_RS01765 PF00672 HAMP domain DAES_RS01765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS01765 PF02743 Cache domain DAES_RS01770 PF07559 Flagellar basal body protein FlaE DAES_RS01770 PF00460 Flagella basal body rod protein DAES_RS01770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS01780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS01780 PF00989 PAS fold DAES_RS01780 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS01780 PF00672 HAMP domain DAES_RS01790 PF03824 High-affinity nickel-transport protein DAES_RS01810 PF02562 PhoH-like protein DAES_RS01810 PF13638 PIN domain DAES_RS01815 PF00994 Probable molybdopterin binding domain DAES_RS01815 PF02464 Competence-damaged protein DAES_RS01825 PF00037 4Fe-4S binding domain DAES_RS01825 PF13247 4Fe-4S dicluster domain DAES_RS01850 PF00563 EAL domain DAES_RS01850 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS01850 PF05231 MASE1 DAES_RS01850 PF08447 PAS fold DAES_RS01850 PF08448 PAS fold DAES_RS01850 PF13426 PAS domain DAES_RS01865 PF00005 ABC transporter DAES_RS01865 PF12704 MacB-like periplasmic core domain DAES_RS01865 PF02687 FtsX-like permease family DAES_RS01870 PF13438 Domain of unknown function (DUF4113) DAES_RS01870 PF00817 impB/mucB/samB family DAES_RS01870 PF11799 impB/mucB/samB family C-terminal domain DAES_RS01875 PF00717 Peptidase S24-like DAES_RS01890 PF02322 Cytochrome bd terminal oxidase subunit II DAES_RS01895 PF01654 Cytochrome bd terminal oxidase subunit I DAES_RS01900 PF00365 Phosphofructokinase DAES_RS01915 PF01610 Transposase DAES_RS01915 PF13542 Helix-turn-helix domain of transposase family ISL3 DAES_RS01915 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DAES_RS01920 PF00149 Calcineurin-like phosphoesterase DAES_RS01925 PF01435 Peptidase family M48 DAES_RS01930 PF00595 PDZ domain DAES_RS01935 PF01209 ubiE/COQ5 methyltransferase family DAES_RS01940 PF00158 Sigma-54 interaction domain DAES_RS01940 PF13426 PAS domain DAES_RS01940 PF02954 Bacterial regulatory protein, Fis family DAES_RS01955 PF01970 Tripartite tricarboxylate transporter TctA family DAES_RS01965 PF03401 Tripartite tricarboxylate transporter family receptor DAES_RS02030 PF02661 Fic/DOC family DAES_RS02240 PF01258 Prokaryotic dksA/traR C4-type zinc finger DAES_RS02275 PF01381 Helix-turn-helix DAES_RS02280 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DAES_RS02350 PF01527 Transposase DAES_RS02395 PF02899 Phage integrase, N-terminal SAM-like domain DAES_RS02395 PF00589 Phage integrase family DAES_RS02420 PF02661 Fic/DOC family DAES_RS02420 PF13784 Fic/DOC family N-terminal DAES_RS02430 PF17841 BID domain of Bartonella effector protein (Bep) DAES_RS02430 PF02661 Fic/DOC family DAES_RS02435 PF01527 Transposase DAES_RS02460 PF00672 HAMP domain DAES_RS02460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS02460 PF02203 Tar ligand binding domain homologue DAES_RS02465 PF03309 Type III pantothenate kinase DAES_RS02470 PF01965 DJ-1/PfpI family DAES_RS02475 PF00113 Enolase, C-terminal TIM barrel domain DAES_RS02475 PF03952 Enolase, N-terminal domain DAES_RS02480 PF01022 Bacterial regulatory protein, arsR family DAES_RS02500 PF00085 Thioredoxin DAES_RS02515 PF07291 Methylamine utilisation protein MauE DAES_RS02520 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DAES_RS02520 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DAES_RS02545 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS02545 PF00672 HAMP domain DAES_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS02565 PF00881 Nitroreductase family DAES_RS02570 PF01638 HxlR-like helix-turn-helix DAES_RS02575 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS02575 PF00072 Response regulator receiver domain DAES_RS02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS02575 PF01627 Hpt domain DAES_RS02575 PF00672 HAMP domain DAES_RS02575 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DAES_RS02580 PF12762 ISXO2-like transposase domain DAES_RS02585 PF01627 Hpt domain DAES_RS02585 PF00072 Response regulator receiver domain DAES_RS02585 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS02585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DAES_RS02585 PF00672 HAMP domain DAES_RS02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS02605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DAES_RS02610 PF03063 Prismane/CO dehydrogenase family DAES_RS02615 PF00027 Cyclic nucleotide-binding domain DAES_RS02615 PF13545 Crp-like helix-turn-helix domain DAES_RS02620 PF05958 tRNA (Uracil-5-)-methyltransferase DAES_RS02625 PF03741 Integral membrane protein TerC family DAES_RS02630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DAES_RS02635 PF12833 Helix-turn-helix domain DAES_RS02635 PF06445 GyrI-like small molecule binding domain DAES_RS02655 PF00005 ABC transporter DAES_RS02675 PF13193 AMP-binding enzyme C-terminal domain DAES_RS02675 PF00501 AMP-binding enzyme DAES_RS02680 PF07883 Cupin domain DAES_RS02685 PF13193 AMP-binding enzyme C-terminal domain DAES_RS02685 PF00501 AMP-binding enzyme DAES_RS02690 PF01381 Helix-turn-helix DAES_RS02700 PF00005 ABC transporter DAES_RS02705 PF03649 Uncharacterised protein family (UPF0014) DAES_RS02710 PF00158 Sigma-54 interaction domain DAES_RS02710 PF02954 Bacterial regulatory protein, Fis family DAES_RS02730 PF13439 Glycosyltransferase Family 4 DAES_RS02730 PF00534 Glycosyl transferases group 1 DAES_RS02740 PF01170 Putative RNA methylase family UPF0020 DAES_RS02740 PF02926 THUMP domain DAES_RS02740 PF10672 S-adenosylmethionine-dependent methyltransferase DAES_RS02755 PF01740 STAS domain DAES_RS02770 PF00005 ABC transporter DAES_RS02770 PF00005 ABC transporter DAES_RS02770 PF00664 ABC transporter transmembrane region DAES_RS02770 PF00664 ABC transporter transmembrane region DAES_RS02800 PF08021 Siderophore-interacting FAD-binding domain DAES_RS02800 PF04954 Siderophore-interacting protein DAES_RS02800 PF00005 ABC transporter DAES_RS02800 PF00664 ABC transporter transmembrane region DAES_RS02805 PF00005 ABC transporter DAES_RS02810 PF07715 TonB-dependent Receptor Plug Domain DAES_RS02810 PF00593 TonB dependent receptor DAES_RS02840 PF01618 MotA/TolQ/ExbB proton channel family DAES_RS02845 PF01618 MotA/TolQ/ExbB proton channel family DAES_RS02850 PF02472 Biopolymer transport protein ExbD/TolR DAES_RS02870 PF00005 ABC transporter DAES_RS02885 PF00593 TonB dependent receptor DAES_RS02885 PF07715 TonB-dependent Receptor Plug Domain DAES_RS02895 PF00005 ABC transporter DAES_RS02895 PF00664 ABC transporter transmembrane region DAES_RS02900 PF02492 CobW/HypB/UreG, nucleotide-binding domain DAES_RS02910 PF07690 Major Facilitator Superfamily DAES_RS02915 PF01047 MarR family DAES_RS02920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DAES_RS02920 PF00005 ABC transporter DAES_RS02925 PF12631 MnmE helical domain DAES_RS02925 PF10396 GTP-binding protein TrmE N-terminus DAES_RS02925 PF01926 50S ribosome-binding GTPase DAES_RS02930 PF04055 Radical SAM superfamily DAES_RS02930 PF06968 Biotin and Thiamin Synthesis associated domain DAES_RS02940 PF10415 Fumarase C C-terminus DAES_RS02940 PF00206 Lyase DAES_RS02960 PF00037 4Fe-4S binding domain DAES_RS02960 PF02906 Iron only hydrogenase large subunit, C-terminal domain DAES_RS02965 PF01678 Diaminopimelate epimerase DAES_RS02970 PF13520 Amino acid permease DAES_RS02975 PF03466 LysR substrate binding domain DAES_RS02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DAES_RS02990 PF00005 ABC transporter DAES_RS03010 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS03015 PF02580 D-Tyr-tRNA(Tyr) deacylase DAES_RS03025 PF01242 6-pyruvoyl tetrahydropterin synthase DAES_RS03035 PF01336 OB-fold nucleic acid binding domain DAES_RS03035 PF02811 PHP domain DAES_RS03035 PF14579 Helix-hairpin-helix motif DAES_RS03035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DAES_RS03035 PF07733 Bacterial DNA polymerase III alpha NTPase domain DAES_RS03040 PF00939 Sodium:sulfate symporter transmembrane region DAES_RS03045 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS03045 PF00072 Response regulator receiver domain DAES_RS03045 PF01627 Hpt domain DAES_RS03105 PF00009 Elongation factor Tu GTP binding domain DAES_RS03105 PF16658 Class II release factor RF3, C-terminal domain DAES_RS03110 PF07730 Histidine kinase DAES_RS03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS03115 PF05860 haemagglutination activity domain DAES_RS03115 PF13332 Hemagglutinin repeat DAES_RS03115 PF13018 Extended Signal Peptide of Type V secretion system DAES_RS03115 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain DAES_RS03115 PF05594 Haemagluttinin repeat DAES_RS03125 PF01527 Transposase DAES_RS03130 PF04829 Pre-toxin domain with VENN motif DAES_RS03130 PF15526 Novel toxin 21 DAES_RS03130 PF05860 haemagglutination activity domain DAES_RS03130 PF05594 Haemagluttinin repeat DAES_RS03130 PF13332 Hemagglutinin repeat DAES_RS03135 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DAES_RS03135 PF17287 POTRA domain DAES_RS03135 PF08479 POTRA domain, ShlB-type DAES_RS03140 PF00072 Response regulator receiver domain DAES_RS03140 PF00196 Bacterial regulatory proteins, luxR family DAES_RS03160 PF07687 Peptidase dimerisation domain DAES_RS03160 PF01546 Peptidase family M20/M25/M40 DAES_RS03165 PF03315 Serine dehydratase beta chain DAES_RS03165 PF03313 Serine dehydratase alpha chain DAES_RS03175 PF00005 ABC transporter DAES_RS03175 PF17912 MalK OB fold domain DAES_RS03180 PF00149 Calcineurin-like phosphoesterase DAES_RS03185 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS03190 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS03195 PF13344 Haloacid dehalogenase-like hydrolase DAES_RS03205 PF00375 Sodium:dicarboxylate symporter family DAES_RS03220 PF00672 HAMP domain DAES_RS03220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS03220 PF13426 PAS domain DAES_RS03225 PF00565 Staphylococcal nuclease homologue DAES_RS03245 PF17763 Glutaminase/Asparaginase C-terminal domain DAES_RS03245 PF00710 Asparaginase, N-terminal DAES_RS03250 PF08335 GlnD PII-uridylyltransferase DAES_RS03250 PF01966 HD domain DAES_RS03255 PF00543 Nitrogen regulatory protein P-II DAES_RS03260 PF00909 Ammonium Transporter Family DAES_RS03285 PF01544 CorA-like Mg2+ transporter protein DAES_RS03295 PF01810 LysE type translocator DAES_RS03300 PF01594 AI-2E family transporter DAES_RS03305 PF16177 Acetyl-coenzyme A synthetase N-terminus DAES_RS03305 PF00501 AMP-binding enzyme DAES_RS03305 PF13193 AMP-binding enzyme C-terminal domain DAES_RS03310 PF04397 LytTr DNA-binding domain DAES_RS03325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DAES_RS03325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DAES_RS03355 PF00753 Metallo-beta-lactamase superfamily DAES_RS03360 PF01773 Na+ dependent nucleoside transporter N-terminus DAES_RS03360 PF07662 Na+ dependent nucleoside transporter C-terminus DAES_RS03360 PF07670 Nucleoside recognition DAES_RS03375 PF00072 Response regulator receiver domain DAES_RS03415 PF00155 Aminotransferase class I and II DAES_RS03420 PF01343 Peptidase family S49 DAES_RS03425 PF02654 Cobalamin-5-phosphate synthase DAES_RS03430 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase DAES_RS03435 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DAES_RS03435 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DAES_RS03460 PF01527 Transposase DAES_RS03480 PF00733 Asparagine synthase DAES_RS03480 PF13537 Glutamine amidotransferase domain DAES_RS03490 PF00535 Glycosyl transferase family 2 DAES_RS03495 PF04055 Radical SAM superfamily DAES_RS03495 PF01938 TRAM domain DAES_RS03495 PF00919 Uncharacterized protein family UPF0004 DAES_RS03505 PF01619 Proline dehydrogenase DAES_RS03510 PF06445 GyrI-like small molecule binding domain DAES_RS03510 PF12833 Helix-turn-helix domain DAES_RS03525 PF01938 TRAM domain DAES_RS03525 PF00919 Uncharacterized protein family UPF0004 DAES_RS03525 PF04055 Radical SAM superfamily DAES_RS03540 PF13847 Methyltransferase domain DAES_RS03540 PF03551 Transcriptional regulator PadR-like family DAES_RS03545 PF17103 Stealth protein CR4, conserved region 4 DAES_RS03545 PF17102 Stealth protein CR3, conserved region 3 DAES_RS03545 PF11380 Stealth protein CR2, conserved region 2 DAES_RS03545 PF17101 Stealth protein CR1, conserved region 1 DAES_RS03545 PF00534 Glycosyl transferases group 1 DAES_RS03555 PF00733 Asparagine synthase DAES_RS03555 PF13537 Glutamine amidotransferase domain DAES_RS03560 PF13537 Glutamine amidotransferase domain DAES_RS03560 PF00733 Asparagine synthase DAES_RS03565 PF13439 Glycosyltransferase Family 4 DAES_RS03565 PF00534 Glycosyl transferases group 1 DAES_RS03575 PF02464 Competence-damaged protein DAES_RS03590 PF01960 ArgJ family DAES_RS03600 PF02405 Permease MlaE DAES_RS03605 PF00005 ABC transporter DAES_RS03625 PF12850 Calcineurin-like phosphoesterase superfamily domain DAES_RS03635 PF00563 EAL domain DAES_RS03635 PF03707 Bacterial signalling protein N terminal repeat DAES_RS03635 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS03645 PF07685 CobB/CobQ-like glutamine amidotransferase domain DAES_RS03645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DAES_RS03650 PF11700 Vacuole effluxer Atg22 like DAES_RS03655 PF01871 AMMECR1 DAES_RS03660 PF01966 HD domain DAES_RS03660 PF11871 Domain of unknown function (DUF3391) DAES_RS03695 PF08264 Anticodon-binding domain of tRNA DAES_RS03695 PF10458 Valyl tRNA synthetase tRNA binding arm DAES_RS03695 PF00133 tRNA synthetases class I (I, L, M and V) DAES_RS03705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DAES_RS03705 PF02602 Uroporphyrinogen-III synthase HemD DAES_RS03710 PF00551 Formyl transferase DAES_RS03715 PF01888 CbiD DAES_RS03720 PF11066 Protein of unknown function (DUF2867) DAES_RS03720 PF13460 NAD(P)H-binding DAES_RS03730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DAES_RS03730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DAES_RS03735 PF17805 AsnC-like ligand binding domain DAES_RS03740 PF00202 Aminotransferase class-III DAES_RS03745 PF11760 Cobalamin synthesis G N-terminal DAES_RS03745 PF11761 Cobalamin biosynthesis central region DAES_RS03745 PF01890 Cobalamin synthesis G C-terminus DAES_RS03750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DAES_RS03755 PF02085 Class III cytochrome C family DAES_RS03770 PF00155 Aminotransferase class I and II DAES_RS03780 PF02881 SRP54-type protein, helical bundle domain DAES_RS03780 PF00448 SRP54-type protein, GTPase domain DAES_RS03780 PF02978 Signal peptide binding domain DAES_RS03785 PF00886 Ribosomal protein S16 DAES_RS03795 PF05239 PRC-barrel domain DAES_RS03795 PF01782 RimM N-terminal domain DAES_RS03800 PF01746 tRNA (Guanine-1)-methyltransferase DAES_RS03800 PF09936 SAM-dependent RNA methyltransferase DAES_RS03805 PF01245 Ribosomal protein L19 DAES_RS03810 PF01351 Ribonuclease HII DAES_RS03815 PF02021 Uncharacterised protein family UPF0102 DAES_RS03820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DAES_RS03825 PF06968 Biotin and Thiamin Synthesis associated domain DAES_RS03825 PF04055 Radical SAM superfamily DAES_RS03830 PF02632 BioY family DAES_RS03840 PF00381 PTS HPr component phosphorylation site DAES_RS03845 PF02896 PEP-utilising enzyme, TIM barrel domain DAES_RS03845 PF00391 PEP-utilising enzyme, mobile domain DAES_RS03845 PF05524 PEP-utilising enzyme, N-terminal DAES_RS03850 PF01668 SmpB protein DAES_RS03860 PF00158 Sigma-54 interaction domain DAES_RS03860 PF00072 Response regulator receiver domain DAES_RS03860 PF02954 Bacterial regulatory protein, Fis family DAES_RS03870 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS03870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DAES_RS03885 PF01593 Flavin containing amine oxidoreductase DAES_RS03895 PF02754 Cysteine-rich domain DAES_RS03905 PF02754 Cysteine-rich domain DAES_RS03915 PF03916 Polysulphide reductase, NrfD DAES_RS03920 PF13247 4Fe-4S dicluster domain DAES_RS03930 PF01565 FAD binding domain DAES_RS03930 PF02913 FAD linked oxidases, C-terminal domain DAES_RS03945 PF01043 SecA preprotein cross-linking domain DAES_RS03945 PF07517 SecA DEAD-like domain DAES_RS03945 PF07516 SecA Wing and Scaffold domain DAES_RS03945 PF02810 SEC-C motif DAES_RS03965 PF01209 ubiE/COQ5 methyltransferase family DAES_RS03975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DAES_RS03975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAES_RS03975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DAES_RS03985 PF00348 Polyprenyl synthetase DAES_RS03990 PF00586 AIR synthase related protein, N-terminal domain DAES_RS03990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DAES_RS03990 PF02769 AIR synthase related protein, C-terminal domain DAES_RS04000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS04000 PF00672 HAMP domain DAES_RS04000 PF13426 PAS domain DAES_RS04010 PF02915 Rubrerythrin DAES_RS04015 PF06397 Desulfoferrodoxin, N-terminal domain DAES_RS04015 PF01880 Desulfoferrodoxin DAES_RS04020 PF00301 Rubredoxin DAES_RS04025 PF00753 Metallo-beta-lactamase superfamily DAES_RS04025 PF00258 Flavodoxin DAES_RS04030 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DAES_RS04035 PF09962 Uncharacterized conserved protein (DUF2196) DAES_RS04045 PF00691 OmpA family DAES_RS04045 PF05736 OprF membrane domain DAES_RS04050 PF01370 NAD dependent epimerase/dehydratase family DAES_RS04055 PF03968 OstA-like protein DAES_RS04055 PF04453 LPS transport system D DAES_RS04060 PF01119 DNA mismatch repair protein, C-terminal domain DAES_RS04060 PF08676 MutL C terminal dimerisation domain DAES_RS04065 PF01168 Alanine racemase, N-terminal domain DAES_RS04065 PF00842 Alanine racemase, C-terminal domain DAES_RS04075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS04075 PF00672 HAMP domain DAES_RS04075 PF02743 Cache domain DAES_RS04080 PF16736 Single Cache-like DAES_RS04080 PF00989 PAS fold DAES_RS04080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS04080 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS04085 PF01384 Phosphate transporter family DAES_RS04095 PF01966 HD domain DAES_RS04095 PF00072 Response regulator receiver domain DAES_RS04100 PF00920 Dehydratase family DAES_RS04105 PF02371 Transposase IS116/IS110/IS902 family DAES_RS04105 PF01548 Transposase DAES_RS04110 PF06628 Catalase-related immune-responsive DAES_RS04110 PF00199 Catalase DAES_RS04115 PF07685 CobB/CobQ-like glutamine amidotransferase domain DAES_RS04115 PF00155 Aminotransferase class I and II DAES_RS04115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DAES_RS04120 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DAES_RS04130 PF00210 Ferritin-like domain DAES_RS04135 PF10502 Signal peptidase, peptidase S26 DAES_RS04140 PF00009 Elongation factor Tu GTP binding domain DAES_RS04140 PF00679 Elongation factor G C-terminus DAES_RS04140 PF03144 Elongation factor Tu domain 2 DAES_RS04140 PF06421 GTP-binding protein LepA C-terminus DAES_RS04175 PF04542 Sigma-70 region 2 DAES_RS04175 PF08281 Sigma-70, region 4 DAES_RS04185 PF00196 Bacterial regulatory proteins, luxR family DAES_RS04185 PF00072 Response regulator receiver domain DAES_RS04195 PF00497 Bacterial extracellular solute-binding proteins, family 3 DAES_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS04205 PF00005 ABC transporter DAES_RS04210 PF04055 Radical SAM superfamily DAES_RS04210 PF12544 Lysine-2,3-aminomutase DAES_RS04220 PF03193 RsgA GTPase DAES_RS04230 PF00873 AcrB/AcrD/AcrF family DAES_RS04235 PF00529 HlyD membrane-fusion protein of T1SS DAES_RS04235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DAES_RS04285 PF13380 CoA binding domain DAES_RS04285 PF13607 Succinyl-CoA ligase like flavodoxin domain DAES_RS04290 PF01361 Tautomerase enzyme DAES_RS04300 PF02085 Class III cytochrome C family DAES_RS04305 PF13247 4Fe-4S dicluster domain DAES_RS04310 PF03916 Polysulphide reductase, NrfD DAES_RS04325 PF02754 Cysteine-rich domain DAES_RS04330 PF01661 Macro domain DAES_RS04335 PF00227 Proteasome subunit DAES_RS04340 PF07724 AAA domain (Cdc48 subfamily) DAES_RS04340 PF00004 ATPase family associated with various cellular activities (AAA) DAES_RS04345 PF00491 Arginase family DAES_RS04355 PF01687 Riboflavin kinase DAES_RS04355 PF06574 FAD synthetase DAES_RS04360 PF01435 Peptidase family M48 DAES_RS04365 PF07498 Rho termination factor, N-terminal domain DAES_RS04365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DAES_RS04365 PF07497 Rho termination factor, RNA-binding domain DAES_RS04375 PF01195 Peptidyl-tRNA hydrolase DAES_RS04380 PF01386 Ribosomal L25p family DAES_RS04380 PF14693 Ribosomal protein TL5, C-terminal domain DAES_RS04385 PF14572 Phosphoribosyl synthetase-associated domain DAES_RS04385 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DAES_RS04395 PF00288 GHMP kinases N terminal domain DAES_RS04395 PF08544 GHMP kinases C terminal DAES_RS04400 PF13180 PDZ domain DAES_RS04410 PF00205 Thiamine pyrophosphate enzyme, central domain DAES_RS04410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DAES_RS04410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DAES_RS04415 PF02702 Osmosensitive K+ channel His kinase sensor domain DAES_RS04415 PF13493 Domain of unknown function (DUF4118) DAES_RS04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS04415 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS04420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS04420 PF17200 Single Cache domain 2 DAES_RS04420 PF00672 HAMP domain DAES_RS04425 PF04264 YceI-like domain DAES_RS04435 PF00005 ABC transporter DAES_RS04440 PF01032 FecCD transport family DAES_RS04450 PF00491 Arginase family DAES_RS04455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DAES_RS04460 PF16653 Saccharopine dehydrogenase C-terminal domain DAES_RS04460 PF03435 Saccharopine dehydrogenase NADP binding domain DAES_RS04465 PF17810 Arginine decarboxylase helical bundle domain DAES_RS04465 PF17944 Arginine decarboxylase C-terminal helical extension DAES_RS04465 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DAES_RS04470 PF01933 Uncharacterised protein family UPF0052 DAES_RS04475 PF14765 Polyketide synthase dehydratase DAES_RS04475 PF00550 Phosphopantetheine attachment site DAES_RS04475 PF08659 KR domain DAES_RS04475 PF00109 Beta-ketoacyl synthase, N-terminal domain DAES_RS04475 PF00698 Acyl transferase domain DAES_RS04475 PF16197 Ketoacyl-synthetase C-terminal extension DAES_RS04475 PF09277 Erythronolide synthase, docking DAES_RS04475 PF08990 Erythronolide synthase docking DAES_RS04475 PF08240 Alcohol dehydrogenase GroES-like domain DAES_RS04475 PF02801 Beta-ketoacyl synthase, C-terminal domain DAES_RS04480 PF00005 ABC transporter DAES_RS04480 PF00664 ABC transporter transmembrane region DAES_RS04480 PF03412 Peptidase C39 family DAES_RS04485 PF00529 HlyD membrane-fusion protein of T1SS DAES_RS04485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DAES_RS04495 PF00072 Response regulator receiver domain DAES_RS04500 PF01554 MatE DAES_RS04520 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS04525 PF13581 Histidine kinase-like ATPase domain DAES_RS04530 PF05145 Transition state regulatory protein AbrB DAES_RS04535 PF02601 Exonuclease VII, large subunit DAES_RS04535 PF13742 OB-fold nucleic acid binding domain DAES_RS04540 PF08525 Opacity-associated protein A N-terminal motif DAES_RS04540 PF01551 Peptidase family M23 DAES_RS04540 PF01476 LysM domain DAES_RS04545 PF02609 Exonuclease VII small subunit DAES_RS04550 PF00348 Polyprenyl synthetase DAES_RS04555 PF02780 Transketolase, C-terminal domain DAES_RS04555 PF02779 Transketolase, pyrimidine binding domain DAES_RS04555 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DAES_RS04560 PF02810 SEC-C motif DAES_RS04565 PF00472 RF-1 domain DAES_RS04585 PF01790 Prolipoprotein diacylglyceryl transferase DAES_RS04600 PF02401 LytB protein DAES_RS04610 PF04055 Radical SAM superfamily DAES_RS04610 PF06463 Molybdenum Cofactor Synthesis C DAES_RS04615 PF00563 EAL domain DAES_RS04615 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS04615 PF03707 Bacterial signalling protein N terminal repeat DAES_RS04620 PF11849 Domain of unknown function (DUF3369) DAES_RS04625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS04625 PF13426 PAS domain DAES_RS04625 PF00072 Response regulator receiver domain DAES_RS04635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS04645 PF00271 Helicase conserved C-terminal domain DAES_RS04645 PF00270 DEAD/DEAH box helicase DAES_RS04650 PF01176 Translation initiation factor 1A / IF-1 DAES_RS04655 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DAES_RS04685 PF14535 AMP-binding enzyme C-terminal domain DAES_RS04685 PF00501 AMP-binding enzyme DAES_RS04690 PF01478 Type IV leader peptidase family DAES_RS04690 PF06750 Bacterial Peptidase A24 N-terminal domain DAES_RS04695 PF00561 alpha/beta hydrolase fold DAES_RS04715 PF07556 Protein of unknown function (DUF1538) DAES_RS04720 PF07556 Protein of unknown function (DUF1538) DAES_RS04725 PF00290 Tryptophan synthase alpha chain DAES_RS04730 PF00291 Pyridoxal-phosphate dependent enzyme DAES_RS04735 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DAES_RS04740 PF00218 Indole-3-glycerol phosphate synthase DAES_RS04745 PF02885 Glycosyl transferase family, helical bundle domain DAES_RS04745 PF00591 Glycosyl transferase family, a/b domain DAES_RS04750 PF02885 Glycosyl transferase family, helical bundle domain DAES_RS04750 PF00591 Glycosyl transferase family, a/b domain DAES_RS04750 PF00117 Glutamine amidotransferase class-I DAES_RS04755 PF00425 chorismate binding enzyme DAES_RS04755 PF04715 Anthranilate synthase component I, N terminal region DAES_RS04765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DAES_RS04770 PF01842 ACT domain DAES_RS04770 PF00800 Prephenate dehydratase DAES_RS04770 PF01817 Chorismate mutase type II DAES_RS04775 PF01959 3-dehydroquinate synthase II DAES_RS04780 PF01791 DeoC/LacD family aldolase DAES_RS04785 PF00909 Ammonium Transporter Family DAES_RS04790 PF00543 Nitrogen regulatory protein P-II DAES_RS04795 PF10388 EAL-domain associated signalling protein domain DAES_RS04795 PF00563 EAL domain DAES_RS04805 PF00202 Aminotransferase class-III DAES_RS04810 PF00155 Aminotransferase class I and II DAES_RS04830 PF02772 S-adenosylmethionine synthetase, central domain DAES_RS04830 PF00438 S-adenosylmethionine synthetase, N-terminal domain DAES_RS04830 PF02773 S-adenosylmethionine synthetase, C-terminal domain DAES_RS04835 PF02261 Aspartate decarboxylase DAES_RS04840 PF02569 Pantoate-beta-alanine ligase DAES_RS04845 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS04845 PF00563 EAL domain DAES_RS04855 PF03477 ATP cone domain DAES_RS04855 PF13597 Anaerobic ribonucleoside-triphosphate reductase DAES_RS04860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DAES_RS04860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DAES_RS04860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DAES_RS04860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DAES_RS04865 PF02203 Tar ligand binding domain homologue DAES_RS04865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS04865 PF00672 HAMP domain DAES_RS04875 PF01435 Peptidase family M48 DAES_RS04910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DAES_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS04925 PF00005 ABC transporter DAES_RS04930 PF00005 ABC transporter DAES_RS04935 PF01118 Semialdehyde dehydrogenase, NAD binding domain DAES_RS04935 PF02774 Semialdehyde dehydrogenase, dimerisation domain DAES_RS04945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DAES_RS04950 PF00873 AcrB/AcrD/AcrF family DAES_RS04960 PF00027 Cyclic nucleotide-binding domain DAES_RS04960 PF00520 Ion transport protein DAES_RS04990 PF01842 ACT domain DAES_RS04990 PF00551 Formyl transferase DAES_RS04995 PF13580 SIS domain DAES_RS05000 PF01627 Hpt domain DAES_RS05000 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05000 PF00672 HAMP domain DAES_RS05000 PF00072 Response regulator receiver domain DAES_RS05000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DAES_RS05010 PF00672 HAMP domain DAES_RS05010 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05010 PF17149 Periplasmic sensor domain found in signal transduction proteins DAES_RS05010 PF00072 Response regulator receiver domain DAES_RS05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05010 PF01627 Hpt domain DAES_RS05015 PF02954 Bacterial regulatory protein, Fis family DAES_RS05015 PF00072 Response regulator receiver domain DAES_RS05015 PF00158 Sigma-54 interaction domain DAES_RS05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05020 PF13188 PAS domain DAES_RS05020 PF00072 Response regulator receiver domain DAES_RS05020 PF08448 PAS fold DAES_RS05020 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05030 PF01925 Sulfite exporter TauE/SafE DAES_RS05035 PF00158 Sigma-54 interaction domain DAES_RS05035 PF00072 Response regulator receiver domain DAES_RS05035 PF02954 Bacterial regulatory protein, Fis family DAES_RS05040 PF00158 Sigma-54 interaction domain DAES_RS05040 PF00072 Response regulator receiver domain DAES_RS05045 PF02954 Bacterial regulatory protein, Fis family DAES_RS05045 PF00072 Response regulator receiver domain DAES_RS05045 PF00158 Sigma-54 interaction domain DAES_RS05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05050 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05055 PF00158 Sigma-54 interaction domain DAES_RS05055 PF00072 Response regulator receiver domain DAES_RS05055 PF02954 Bacterial regulatory protein, Fis family DAES_RS05060 PF02896 PEP-utilising enzyme, TIM barrel domain DAES_RS05060 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DAES_RS05060 PF00391 PEP-utilising enzyme, mobile domain DAES_RS05065 PF03773 Predicted permease DAES_RS05080 PF01297 Zinc-uptake complex component A periplasmic DAES_RS05080 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DAES_RS05085 PF01869 BadF/BadG/BcrA/BcrD ATPase family DAES_RS05090 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DAES_RS05100 PF00682 HMGL-like DAES_RS05105 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DAES_RS05110 PF00543 Nitrogen regulatory protein P-II DAES_RS05115 PF00543 Nitrogen regulatory protein P-II DAES_RS05120 PF00148 Nitrogenase component 1 type Oxidoreductase DAES_RS05125 PF00148 Nitrogenase component 1 type Oxidoreductase DAES_RS05130 PF02579 Dinitrogenase iron-molybdenum cofactor DAES_RS05130 PF04055 Radical SAM superfamily DAES_RS05140 PF00148 Nitrogenase component 1 type Oxidoreductase DAES_RS05145 PF00148 Nitrogenase component 1 type Oxidoreductase DAES_RS05150 PF02579 Dinitrogenase iron-molybdenum cofactor DAES_RS05150 PF04055 Radical SAM superfamily DAES_RS05160 PF00158 Sigma-54 interaction domain DAES_RS05160 PF02954 Bacterial regulatory protein, Fis family DAES_RS05160 PF01590 GAF domain DAES_RS05170 PF12849 PBP superfamily domain DAES_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS05180 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS05185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS05185 PF13426 PAS domain DAES_RS05185 PF00672 HAMP domain DAES_RS05190 PF08497 Radical SAM N-terminal DAES_RS05190 PF04055 Radical SAM superfamily DAES_RS05190 PF11842 Domain of unknown function (DUF3362) DAES_RS05200 PF00270 DEAD/DEAH box helicase DAES_RS05200 PF00271 Helicase conserved C-terminal domain DAES_RS05205 PF01513 ATP-NAD kinase DAES_RS05210 PF00285 Citrate synthase, C-terminal domain DAES_RS05215 PF13247 4Fe-4S dicluster domain DAES_RS05215 PF00037 4Fe-4S binding domain DAES_RS05225 PF16916 Dimerisation domain of Zinc Transporter DAES_RS05225 PF01545 Cation efflux family DAES_RS05230 PF02660 Glycerol-3-phosphate acyltransferase DAES_RS05235 PF08206 Ribonuclease B OB domain DAES_RS05235 PF00773 RNB domain DAES_RS05240 PF04193 PQ loop repeat DAES_RS05245 PF01808 AICARFT/IMPCHase bienzyme DAES_RS05245 PF02142 MGS-like domain DAES_RS05250 PF00672 HAMP domain DAES_RS05250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS05250 PF17200 Single Cache domain 2 DAES_RS05255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS05255 PF00672 HAMP domain DAES_RS05255 PF12729 Four helix bundle sensory module for signal transduction DAES_RS05265 PF00709 Adenylosuccinate synthetase DAES_RS05270 PF09115 DNA polymerase III, delta subunit, C terminal DAES_RS05295 PF00679 Elongation factor G C-terminus DAES_RS05295 PF00009 Elongation factor Tu GTP binding domain DAES_RS05295 PF03144 Elongation factor Tu domain 2 DAES_RS05305 PF10415 Fumarase C C-terminus DAES_RS05305 PF00206 Lyase DAES_RS05310 PF05036 Sporulation related domain DAES_RS05310 PF03330 Lytic transglycolase DAES_RS05320 PF13188 PAS domain DAES_RS05320 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05320 PF00072 Response regulator receiver domain DAES_RS05320 PF08448 PAS fold DAES_RS05325 PF02954 Bacterial regulatory protein, Fis family DAES_RS05325 PF00158 Sigma-54 interaction domain DAES_RS05325 PF00072 Response regulator receiver domain DAES_RS05330 PF00216 Bacterial DNA-binding protein DAES_RS05340 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DAES_RS05340 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DAES_RS05340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DAES_RS05340 PF10371 Domain of unknown function DAES_RS05340 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DAES_RS05345 PF02652 L-lactate permease DAES_RS05350 PF02913 FAD linked oxidases, C-terminal domain DAES_RS05350 PF01565 FAD binding domain DAES_RS05355 PF02754 Cysteine-rich domain DAES_RS05360 PF01515 Phosphate acetyl/butaryl transferase DAES_RS05360 PF07085 DRTGG domain DAES_RS05365 PF00871 Acetokinase family DAES_RS05370 PF02589 LUD domain DAES_RS05375 PF11870 Domain of unknown function (DUF3390) DAES_RS05375 PF02589 LUD domain DAES_RS05375 PF13183 4Fe-4S dicluster domain DAES_RS05380 PF13426 PAS domain DAES_RS05380 PF00672 HAMP domain DAES_RS05380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS05425 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DAES_RS05430 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DAES_RS05435 PF00361 Proton-conducting membrane transporter DAES_RS05440 PF00361 Proton-conducting membrane transporter DAES_RS05450 PF00361 Proton-conducting membrane transporter DAES_RS05460 PF00072 Response regulator receiver domain DAES_RS05460 PF00486 Transcriptional regulatory protein, C terminal DAES_RS05480 PF00072 Response regulator receiver domain DAES_RS05480 PF00196 Bacterial regulatory proteins, luxR family DAES_RS05490 PF00072 Response regulator receiver domain DAES_RS05490 PF00158 Sigma-54 interaction domain DAES_RS05490 PF02954 Bacterial regulatory protein, Fis family DAES_RS05495 PF00689 Cation transporting ATPase, C-terminus DAES_RS05495 PF00690 Cation transporter/ATPase, N-terminus DAES_RS05500 PF01451 Low molecular weight phosphotyrosine protein phosphatase DAES_RS05505 PF01740 STAS domain DAES_RS05505 PF00916 Sulfate permease family DAES_RS05510 PF00158 Sigma-54 interaction domain DAES_RS05510 PF00072 Response regulator receiver domain DAES_RS05520 PF00005 ABC transporter DAES_RS05530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05530 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05540 PF00593 TonB dependent receptor DAES_RS05540 PF07715 TonB-dependent Receptor Plug Domain DAES_RS05545 PF00072 Response regulator receiver domain DAES_RS05545 PF00486 Transcriptional regulatory protein, C terminal DAES_RS05550 PF00669 Bacterial flagellin N-terminal helical region DAES_RS05550 PF00700 Bacterial flagellin C-terminal helical region DAES_RS05560 PF03963 Flagellar hook capping protein - N-terminal region DAES_RS05560 PF13860 FlgD Ig-like domain DAES_RS05560 PF13861 FlgD Tudor-like domain DAES_RS05565 PF00460 Flagella basal body rod protein DAES_RS05565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS05565 PF07559 Flagellar basal body protein FlaE DAES_RS05570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS05570 PF00460 Flagella basal body rod protein DAES_RS05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05585 PF00672 HAMP domain DAES_RS05585 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05590 PF00072 Response regulator receiver domain DAES_RS05590 PF00486 Transcriptional regulatory protein, C terminal DAES_RS05595 PF02321 Outer membrane efflux protein DAES_RS05600 PF13533 Biotin-lipoyl like DAES_RS05605 PF00873 AcrB/AcrD/AcrF family DAES_RS05615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS05615 PF00672 HAMP domain DAES_RS05635 PF02687 FtsX-like permease family DAES_RS05635 PF00005 ABC transporter DAES_RS05635 PF12704 MacB-like periplasmic core domain DAES_RS05640 PF02687 FtsX-like permease family DAES_RS05640 PF12704 MacB-like periplasmic core domain DAES_RS05640 PF00005 ABC transporter DAES_RS05665 PF07859 alpha/beta hydrolase fold DAES_RS05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05670 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05670 PF00072 Response regulator receiver domain DAES_RS05670 PF09308 LuxQ, periplasmic DAES_RS05675 PF00072 Response regulator receiver domain DAES_RS05675 PF00158 Sigma-54 interaction domain DAES_RS05675 PF02954 Bacterial regulatory protein, Fis family DAES_RS05685 PF00120 Glutamine synthetase, catalytic domain DAES_RS05700 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS05710 PF00005 ABC transporter DAES_RS05715 PF17912 MalK OB fold domain DAES_RS05715 PF00005 ABC transporter DAES_RS05725 PF01568 Molydopterin dinucleotide binding domain DAES_RS05725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DAES_RS05725 PF00384 Molybdopterin oxidoreductase DAES_RS05750 PF00440 Bacterial regulatory proteins, tetR family DAES_RS05750 PF16859 Tetracyclin repressor-like, C-terminal domain DAES_RS05770 PF08245 Mur ligase middle domain DAES_RS05770 PF02875 Mur ligase family, glutamate ligase domain DAES_RS05775 PF12390 Selenocysteine synthase N terminal DAES_RS05775 PF03841 L-seryl-tRNA selenium transferase DAES_RS05780 PF02127 Aminopeptidase I zinc metalloprotease (M18) DAES_RS05790 PF09106 Elongation factor SelB, winged helix DAES_RS05790 PF09107 Elongation factor SelB, winged helix DAES_RS05790 PF00009 Elongation factor Tu GTP binding domain DAES_RS05790 PF03144 Elongation factor Tu domain 2 DAES_RS05805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DAES_RS05810 PF01274 Malate synthase DAES_RS05825 PF00132 Bacterial transferase hexapeptide (six repeats) DAES_RS05830 PF00392 Bacterial regulatory proteins, gntR family DAES_RS05830 PF07702 UTRA domain DAES_RS05835 PF06754 Phosphonate metabolism protein PhnG DAES_RS05845 PF05861 Bacterial phosphonate metabolism protein (PhnI) DAES_RS05850 PF06007 Phosphonate metabolism protein PhnJ DAES_RS05855 PF00005 ABC transporter DAES_RS05860 PF00005 ABC transporter DAES_RS05865 PF07969 Amidohydrolase family DAES_RS05870 PF00005 ABC transporter DAES_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS05930 PF13614 AAA domain DAES_RS05940 PF10518 TAT (twin-arginine translocation) pathway signal sequence DAES_RS05940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DAES_RS05940 PF00384 Molybdopterin oxidoreductase DAES_RS05940 PF01568 Molydopterin dinucleotide binding domain DAES_RS05945 PF13247 4Fe-4S dicluster domain DAES_RS05970 PF13188 PAS domain DAES_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS05970 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS05970 PF00989 PAS fold DAES_RS05970 PF13426 PAS domain DAES_RS05975 PF00072 Response regulator receiver domain DAES_RS05975 PF00158 Sigma-54 interaction domain DAES_RS05975 PF02954 Bacterial regulatory protein, Fis family DAES_RS05980 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DAES_RS05980 PF02896 PEP-utilising enzyme, TIM barrel domain DAES_RS05980 PF00391 PEP-utilising enzyme, mobile domain DAES_RS05995 PF08668 HDOD domain DAES_RS06000 PF12706 Beta-lactamase superfamily domain DAES_RS06000 PF00753 Metallo-beta-lactamase superfamily DAES_RS06005 PF00072 Response regulator receiver domain DAES_RS06005 PF00486 Transcriptional regulatory protein, C terminal DAES_RS06010 PF04468 PSP1 C-terminal conserved region DAES_RS06015 PF00133 tRNA synthetases class I (I, L, M and V) DAES_RS06015 PF09334 tRNA synthetases class I (M) DAES_RS06015 PF01588 Putative tRNA binding domain DAES_RS06040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DAES_RS06040 PF02142 MGS-like domain DAES_RS06040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DAES_RS06045 PF00156 Phosphoribosyl transferase domain DAES_RS06050 PF00571 CBS domain DAES_RS06050 PF01380 SIS domain DAES_RS06060 PF00905 Penicillin binding protein transpeptidase domain DAES_RS06060 PF00912 Transglycosylase DAES_RS06060 PF17092 Penicillin-binding protein OB-like domain DAES_RS06065 PF02567 Phenazine biosynthesis-like protein DAES_RS06070 PF16325 Peptidase family U32 C-terminal domain DAES_RS06070 PF01136 Peptidase family U32 DAES_RS06075 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DAES_RS06080 PF01180 Dihydroorotate dehydrogenase DAES_RS06095 PF01758 Sodium Bile acid symporter family DAES_RS06110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DAES_RS06115 PF00005 ABC transporter DAES_RS06125 PF00581 Rhodanese-like domain DAES_RS06135 PF01479 S4 domain DAES_RS06135 PF01728 FtsJ-like methyltransferase DAES_RS06140 PF00291 Pyridoxal-phosphate dependent enzyme DAES_RS06150 PF00501 AMP-binding enzyme DAES_RS06150 PF14535 AMP-binding enzyme C-terminal domain DAES_RS06155 PF00772 DnaB-like helicase N terminal domain DAES_RS06155 PF03796 DnaB-like helicase C terminal domain DAES_RS06160 PF01281 Ribosomal protein L9, N-terminal domain DAES_RS06160 PF03948 Ribosomal protein L9, C-terminal domain DAES_RS06165 PF01084 Ribosomal protein S18 DAES_RS06170 PF01250 Ribosomal protein S6 DAES_RS06175 PF01259 SAICAR synthetase DAES_RS06180 PF00815 Histidinol dehydrogenase DAES_RS06190 PF01541 GIY-YIG catalytic domain DAES_RS06190 PF08459 UvrC Helix-hairpin-helix N-terminal DAES_RS06190 PF02151 UvrB/uvrC motif DAES_RS06200 PF02441 Flavoprotein DAES_RS06220 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DAES_RS06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS06230 PF00072 Response regulator receiver domain DAES_RS06230 PF01584 CheW-like domain DAES_RS06230 PF01627 Hpt domain DAES_RS06230 PF02895 Signal transducing histidine kinase, homodimeric domain DAES_RS06235 PF00072 Response regulator receiver domain DAES_RS06235 PF01584 CheW-like domain DAES_RS06245 PF08534 Redoxin DAES_RS06250 PF01022 Bacterial regulatory protein, arsR family DAES_RS06265 PF00005 ABC transporter DAES_RS06270 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS06275 PF02562 PhoH-like protein DAES_RS06280 PF02130 Uncharacterized protein family UPF0054 DAES_RS06290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DAES_RS06290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DAES_RS06295 PF00764 Arginosuccinate synthase DAES_RS06300 PF14698 Argininosuccinate lyase C-terminal DAES_RS06300 PF00206 Lyase DAES_RS06305 PF01434 Peptidase family M41 DAES_RS06305 PF00004 ATPase family associated with various cellular activities (AAA) DAES_RS06305 PF06480 FtsH Extracellular DAES_RS06305 PF17862 AAA+ lid domain DAES_RS06310 PF00809 Pterin binding enzyme DAES_RS06315 PF02457 DisA bacterial checkpoint controller nucleotide-binding DAES_RS06325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DAES_RS06325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DAES_RS06325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DAES_RS06325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DAES_RS06330 PF00483 Nucleotidyl transferase DAES_RS06340 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DAES_RS06340 PF04851 Type III restriction enzyme, res subunit DAES_RS06340 PF17764 3′ DNA-binding domain (3′BD) DAES_RS06340 PF00271 Helicase conserved C-terminal domain DAES_RS06340 PF18074 Primosomal protein N C-terminal domain DAES_RS06365 PF05690 Thiazole biosynthesis protein ThiG DAES_RS06370 PF04055 Radical SAM superfamily DAES_RS06370 PF06968 Biotin and Thiamin Synthesis associated domain DAES_RS06380 PF02581 Thiamine monophosphate synthase DAES_RS06385 PF01964 Radical SAM ThiC family DAES_RS06410 PF00962 Adenosine/AMP deaminase DAES_RS06430 PF00535 Glycosyl transferase family 2 DAES_RS06445 PF01569 PAP2 superfamily DAES_RS06450 PF00534 Glycosyl transferases group 1 DAES_RS06460 PF01370 NAD dependent epimerase/dehydratase family DAES_RS06460 PF02911 Formyl transferase, C-terminal domain DAES_RS06460 PF00551 Formyl transferase DAES_RS06465 PF04029 2-phosphosulpholactate phosphatase DAES_RS06470 PF00072 Response regulator receiver domain DAES_RS06470 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS06480 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DAES_RS06485 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DAES_RS06490 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DAES_RS06495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DAES_RS06500 PF00146 NADH dehydrogenase DAES_RS06505 PF12838 4Fe-4S dicluster domain DAES_RS06510 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DAES_RS06515 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DAES_RS06520 PF00361 Proton-conducting membrane transporter DAES_RS06530 PF00361 Proton-conducting membrane transporter DAES_RS06535 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DAES_RS06535 PF00361 Proton-conducting membrane transporter DAES_RS06540 PF00361 Proton-conducting membrane transporter DAES_RS06560 PF01926 50S ribosome-binding GTPase DAES_RS06560 PF06071 Protein of unknown function (DUF933) DAES_RS06565 PF01202 Shikimate kinase DAES_RS06570 PF02386 Cation transport protein DAES_RS06585 PF01541 GIY-YIG catalytic domain DAES_RS06590 PF00005 ABC transporter DAES_RS06590 PF12848 ABC transporter DAES_RS06595 PF00293 NUDIX domain DAES_RS06600 PF02219 Methylenetetrahydrofolate reductase DAES_RS06605 PF02774 Semialdehyde dehydrogenase, dimerisation domain DAES_RS06605 PF01118 Semialdehyde dehydrogenase, NAD binding domain DAES_RS06610 PF01063 Amino-transferase class IV DAES_RS06620 PF00027 Cyclic nucleotide-binding domain DAES_RS06625 PF04321 RmlD substrate binding domain DAES_RS06630 PF16363 GDP-mannose 4,6 dehydratase DAES_RS06635 PF00588 SpoU rRNA Methylase family DAES_RS06645 PF00005 ABC transporter DAES_RS06650 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS06655 PF12849 PBP superfamily domain DAES_RS06665 PF00899 ThiF family DAES_RS06675 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DAES_RS06675 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DAES_RS06680 PF12762 ISXO2-like transposase domain DAES_RS06695 PF02954 Bacterial regulatory protein, Fis family DAES_RS06695 PF00072 Response regulator receiver domain DAES_RS06695 PF00158 Sigma-54 interaction domain DAES_RS06720 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS06720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DAES_RS06720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DAES_RS06725 PF02508 Rnf-Nqr subunit, membrane protein DAES_RS06730 PF02508 Rnf-Nqr subunit, membrane protein DAES_RS06740 PF03116 NQR2, RnfD, RnfE family DAES_RS06750 PF02085 Class III cytochrome C family DAES_RS06765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS06770 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS06770 PF09456 RcsC Alpha-Beta-Loop (ABL) DAES_RS06770 PF00072 Response regulator receiver domain DAES_RS06785 PF00072 Response regulator receiver domain DAES_RS06805 PF04358 DsrC like protein DAES_RS06810 PF01197 Ribosomal protein L31 DAES_RS06815 PF07136 Protein of unknown function (DUF1385) DAES_RS06820 PF03462 PCRF domain DAES_RS06820 PF00472 RF-1 domain DAES_RS06825 PF13847 Methyltransferase domain DAES_RS06825 PF17827 PrmC N-terminal domain DAES_RS06830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DAES_RS06855 PF00072 Response regulator receiver domain DAES_RS06860 PF04545 Sigma-70, region 4 DAES_RS06860 PF04539 Sigma-70 region 3 DAES_RS06860 PF04542 Sigma-70 region 2 DAES_RS06865 PF10609 NUBPL iron-transfer P-loop NTPase DAES_RS06870 PF00448 SRP54-type protein, GTPase domain DAES_RS06875 PF00771 FHIPEP family DAES_RS06880 PF01312 FlhB HrpN YscU SpaS Family DAES_RS06885 PF01311 Bacterial export proteins, family 1 DAES_RS06890 PF08525 Opacity-associated protein A N-terminal motif DAES_RS06890 PF01551 Peptidase family M23 DAES_RS06890 PF01476 LysM domain DAES_RS06895 PF11734 TilS substrate C-terminal domain DAES_RS06895 PF01171 PP-loop family DAES_RS06895 PF09179 TilS substrate binding domain DAES_RS06905 PF01192 RNA polymerase Rpb6 DAES_RS06910 PF00226 DnaJ domain DAES_RS06910 PF00684 DnaJ central domain DAES_RS06910 PF01556 DnaJ C terminal domain DAES_RS06915 PF01967 MoaC family DAES_RS06920 PF00977 Histidine biosynthesis protein DAES_RS06925 PF00117 Glutamine amidotransferase class-I DAES_RS06930 PF00684 DnaJ central domain DAES_RS06930 PF01556 DnaJ C terminal domain DAES_RS06930 PF00226 DnaJ domain DAES_RS06945 PF01321 Creatinase/Prolidase N-terminal domain DAES_RS06945 PF00557 Metallopeptidase family M24 DAES_RS06955 PF00465 Iron-containing alcohol dehydrogenase DAES_RS06960 PF11412 Disulphide bond corrector protein DsbC DAES_RS06960 PF02683 Cytochrome C biogenesis protein transmembrane region DAES_RS06975 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DAES_RS06975 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DAES_RS06975 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DAES_RS06975 PF10371 Domain of unknown function DAES_RS06975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DAES_RS06990 PF00581 Rhodanese-like domain DAES_RS06990 PF00753 Metallo-beta-lactamase superfamily DAES_RS07010 PF00005 ABC transporter DAES_RS07015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DAES_RS07020 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS07020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAES_RS07030 PF01336 OB-fold nucleic acid binding domain DAES_RS07030 PF00152 tRNA synthetases class II (D, K and N) DAES_RS07035 PF02687 FtsX-like permease family DAES_RS07035 PF12704 MacB-like periplasmic core domain DAES_RS07040 PF00005 ABC transporter DAES_RS07045 PF01103 Surface antigen DAES_RS07045 PF07244 Surface antigen variable number repeat DAES_RS07055 PF00132 Bacterial transferase hexapeptide (six repeats) DAES_RS07055 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DAES_RS07060 PF07977 FabA-like domain DAES_RS07065 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DAES_RS07065 PF00132 Bacterial transferase hexapeptide (six repeats) DAES_RS07070 PF06230 LpxI C-terminal domain DAES_RS07070 PF17930 LpxI N-terminal domain DAES_RS07085 PF03631 Virulence factor BrkB DAES_RS07095 PF01702 Queuine tRNA-ribosyltransferase DAES_RS07100 PF00730 HhH-GPD superfamily base excision DNA repair protein DAES_RS07100 PF00633 Helix-hairpin-helix motif DAES_RS07105 PF03091 CutA1 divalent ion tolerance protein DAES_RS07110 PF00294 pfkB family carbohydrate kinase DAES_RS07120 PF01747 ATP-sulfurylase DAES_RS07120 PF14306 PUA-like domain DAES_RS07125 PF00919 Uncharacterized protein family UPF0004 DAES_RS07125 PF04055 Radical SAM superfamily DAES_RS07130 PF02577 Bifunctional nuclease DAES_RS07140 PF01618 MotA/TolQ/ExbB proton channel family DAES_RS07145 PF02472 Biopolymer transport protein ExbD/TolR DAES_RS07155 PF07676 WD40-like Beta Propeller Repeat DAES_RS07160 PF00691 OmpA family DAES_RS07165 PF04608 Phosphatidylglycerophosphatase A DAES_RS07175 PF02545 Maf-like protein DAES_RS07185 PF01618 MotA/TolQ/ExbB proton channel family DAES_RS07190 PF02685 Glucokinase DAES_RS07195 PF00156 Phosphoribosyl transferase domain DAES_RS07200 PF02608 ABC transporter substrate-binding protein PnrA-like DAES_RS07205 PF02653 Branched-chain amino acid transport system / permease component DAES_RS07210 PF02653 Branched-chain amino acid transport system / permease component DAES_RS07215 PF00005 ABC transporter DAES_RS07220 PF13286 Phosphohydrolase-associated domain DAES_RS07220 PF01966 HD domain DAES_RS07240 PF01676 Metalloenzyme superfamily DAES_RS07240 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DAES_RS07245 PF03447 Homoserine dehydrogenase, NAD binding domain DAES_RS07245 PF00742 Homoserine dehydrogenase DAES_RS07245 PF01842 ACT domain DAES_RS07250 PF00155 Aminotransferase class I and II DAES_RS07255 PF01063 Amino-transferase class IV DAES_RS07260 PF12169 DNA polymerase III subunits gamma and tau domain III DAES_RS07265 PF02575 YbaB/EbfC DNA-binding family DAES_RS07270 PF13662 Toprim domain DAES_RS07270 PF02132 RecR protein DAES_RS07275 PF13538 UvrD-like helicase C-terminal domain DAES_RS07275 PF14490 Helix-hairpin-helix containing domain DAES_RS07275 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DAES_RS07280 PF00210 Ferritin-like domain DAES_RS07290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DAES_RS07295 PF12848 ABC transporter DAES_RS07295 PF00005 ABC transporter DAES_RS07305 PF01039 Carboxyl transferase domain DAES_RS07305 PF17848 Acetyl-coA carboxylase zinc finger domain DAES_RS07310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DAES_RS07310 PF02785 Biotin carboxylase C-terminal domain DAES_RS07310 PF00289 Biotin carboxylase, N-terminal domain DAES_RS07315 PF18267 Rubredoxin NAD+ reductase C-terminal domain DAES_RS07315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DAES_RS07315 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS07315 PF04324 BFD-like [2Fe-2S] binding domain DAES_RS07320 PF00211 Adenylate and Guanylate cyclase catalytic domain DAES_RS07330 PF00005 ABC transporter DAES_RS07330 PF03412 Peptidase C39 family DAES_RS07330 PF00664 ABC transporter transmembrane region DAES_RS07335 PF00529 HlyD membrane-fusion protein of T1SS DAES_RS07335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DAES_RS07355 PF00672 HAMP domain DAES_RS07355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS07355 PF02203 Tar ligand binding domain homologue DAES_RS07365 PF12762 ISXO2-like transposase domain DAES_RS07375 PF01527 Transposase DAES_RS07380 PF12762 ISXO2-like transposase domain DAES_RS07385 PF14437 MafB19-like deaminase DAES_RS07395 PF00117 Glutamine amidotransferase class-I DAES_RS07395 PF06418 CTP synthase N-terminus DAES_RS07400 PF00793 DAHP synthetase I family DAES_RS07420 PF00005 ABC transporter DAES_RS07420 PF12399 Branched-chain amino acid ATP-binding cassette transporter DAES_RS07425 PF04552 Sigma-54, DNA binding domain DAES_RS07425 PF00309 Sigma-54 factor, Activator interacting domain (AID) DAES_RS07425 PF04963 Sigma-54 factor, core binding domain DAES_RS07430 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DAES_RS07430 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DAES_RS07435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DAES_RS07440 PF03668 P-loop ATPase protein family DAES_RS07450 PF03830 PTS system sorbose subfamily IIB component DAES_RS07460 PF02833 DHHA2 domain DAES_RS07460 PF01368 DHH family DAES_RS07465 PF00701 Dihydrodipicolinate synthetase family DAES_RS07475 PF00216 Bacterial DNA-binding protein DAES_RS07480 PF10609 NUBPL iron-transfer P-loop NTPase DAES_RS07485 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS07490 PF03462 PCRF domain DAES_RS07490 PF00472 RF-1 domain DAES_RS07495 PF00795 Carbon-nitrogen hydrolase DAES_RS07500 PF03471 Transporter associated domain DAES_RS07500 PF00571 CBS domain DAES_RS07505 PF13932 GidA associated domain DAES_RS07505 PF01134 Glucose inhibited division protein A DAES_RS07510 PF07687 Peptidase dimerisation domain DAES_RS07510 PF01546 Peptidase family M20/M25/M40 DAES_RS07520 PF01979 Amidohydrolase family DAES_RS07525 PF01048 Phosphorylase superfamily DAES_RS07530 PF00156 Phosphoribosyl transferase domain DAES_RS07535 PF00398 Ribosomal RNA adenine dimethylase DAES_RS07540 PF00216 Bacterial DNA-binding protein DAES_RS07545 PF01165 Ribosomal protein S21 DAES_RS07550 PF09424 Yqey-like protein DAES_RS07555 PF01713 Smr domain DAES_RS07555 PF00488 MutS domain V DAES_RS07560 PF01807 CHC2 zinc finger DAES_RS07560 PF10410 DnaB-helicase binding domain of primase DAES_RS07560 PF08275 DNA primase catalytic core, N-terminal domain DAES_RS07565 PF04539 Sigma-70 region 3 DAES_RS07565 PF04545 Sigma-70, region 4 DAES_RS07565 PF04546 Sigma-70, non-essential region DAES_RS07565 PF03979 Sigma-70 factor, region 1.1 DAES_RS07565 PF04542 Sigma-70 region 2 DAES_RS07565 PF00140 Sigma-70 factor, region 1.2 DAES_RS07570 PF03186 CobD/Cbib protein DAES_RS07580 PF14748 Pyrroline-5-carboxylate reductase dimerisation DAES_RS07580 PF03807 NADP oxidoreductase coenzyme F420-dependent DAES_RS07585 PF00334 Nucleoside diphosphate kinase DAES_RS07590 PF00005 ABC transporter DAES_RS07595 PF02653 Branched-chain amino acid transport system / permease component DAES_RS07605 PF02154 Flagellar motor switch protein FliM DAES_RS07605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DAES_RS07615 PF13180 PDZ domain DAES_RS07615 PF03572 Peptidase family S41 DAES_RS07640 PF00202 Aminotransferase class-III DAES_RS07645 PF00692 dUTPase DAES_RS07650 PF00474 Sodium:solute symporter family DAES_RS07655 PF01645 Conserved region in glutamate synthase DAES_RS07655 PF13187 4Fe-4S dicluster domain DAES_RS07660 PF12800 4Fe-4S binding domain DAES_RS07660 PF13247 4Fe-4S dicluster domain DAES_RS07665 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS07665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DAES_RS07665 PF18267 Rubredoxin NAD+ reductase C-terminal domain DAES_RS07665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DAES_RS07665 PF04324 BFD-like [2Fe-2S] binding domain DAES_RS07670 PF00310 Glutamine amidotransferases class-II DAES_RS07680 PF02699 Preprotein translocase subunit DAES_RS07685 PF02355 Protein export membrane protein DAES_RS07685 PF07549 SecD/SecF GG Motif DAES_RS07690 PF02355 Protein export membrane protein DAES_RS07690 PF07549 SecD/SecF GG Motif DAES_RS07700 PF01171 PP-loop family DAES_RS07710 PF01488 Shikimate / quinate 5-dehydrogenase DAES_RS07710 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DAES_RS07710 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DAES_RS07715 PF01578 Cytochrome C assembly protein DAES_RS07720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DAES_RS07720 PF14824 Sirohaem biosynthesis protein central DAES_RS07720 PF10414 Sirohaem synthase dimerisation region DAES_RS07730 PF12996 DUF based on E. rectale Gene description (DUF3880) DAES_RS07735 PF12002 MgsA AAA+ ATPase C terminal DAES_RS07735 PF16193 AAA C-terminal domain DAES_RS07735 PF00004 ATPase family associated with various cellular activities (AAA) DAES_RS07745 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DAES_RS07745 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DAES_RS07755 PF05192 MutS domain III DAES_RS07755 PF05190 MutS family domain IV DAES_RS07755 PF00488 MutS domain V DAES_RS07755 PF05188 MutS domain II DAES_RS07755 PF01624 MutS domain I DAES_RS07760 PF18073 Rubredoxin metal binding domain DAES_RS07780 PF00571 CBS domain DAES_RS07780 PF02272 DHHA1 domain DAES_RS07780 PF01368 DHH family DAES_RS07780 PF01743 Poly A polymerase head domain DAES_RS07780 PF12627 Probable RNA and SrmB- binding site of polymerase A DAES_RS07785 PF02899 Phage integrase, N-terminal SAM-like domain DAES_RS07785 PF00589 Phage integrase family DAES_RS07790 PF00155 Aminotransferase class I and II DAES_RS07795 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DAES_RS07810 PF00484 Carbonic anhydrase DAES_RS07820 PF03840 Preprotein translocase SecG subunit DAES_RS07825 PF00121 Triosephosphate isomerase DAES_RS07830 PF00162 Phosphoglycerate kinase DAES_RS07835 PF00583 Acetyltransferase (GNAT) family DAES_RS07845 PF00459 Inositol monophosphatase family DAES_RS07860 PF01571 Aminomethyltransferase folate-binding domain DAES_RS07860 PF08669 Glycine cleavage T-protein C-terminal barrel domain DAES_RS07875 PF01479 S4 domain DAES_RS07875 PF00849 RNA pseudouridylate synthase DAES_RS07880 PF03548 Outer membrane lipoprotein carrier protein LolA DAES_RS07885 PF17854 FtsK alpha domain DAES_RS07885 PF01580 FtsK/SpoIIIE family DAES_RS07885 PF09397 Ftsk gamma domain DAES_RS07885 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DAES_RS07890 PF01132 Elongation factor P (EF-P) OB domain DAES_RS07890 PF08207 Elongation factor P (EF-P) KOW-like domain DAES_RS07890 PF09285 Elongation factor P, C-terminal DAES_RS07895 PF01220 Dehydroquinase class II DAES_RS07900 PF01926 50S ribosome-binding GTPase DAES_RS07920 PF02673 Bacitracin resistance protein BacA DAES_RS07940 PF02796 Helix-turn-helix domain of resolvase DAES_RS07940 PF00239 Resolvase, N terminal domain DAES_RS07955 PF01726 LexA DNA binding domain DAES_RS07955 PF00717 Peptidase S24-like DAES_RS08005 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DAES_RS08005 PF13538 UvrD-like helicase C-terminal domain DAES_RS08005 PF14490 Helix-hairpin-helix containing domain DAES_RS08010 PF01807 CHC2 zinc finger DAES_RS08010 PF13662 Toprim domain DAES_RS08010 PF10410 DnaB-helicase binding domain of primase DAES_RS08010 PF08278 DNA primase DnaG DnaB-binding DAES_RS08010 PF08275 DNA primase catalytic core, N-terminal domain DAES_RS08030 PF02899 Phage integrase, N-terminal SAM-like domain DAES_RS08030 PF00589 Phage integrase family DAES_RS08170 PF01471 Putative peptidoglycan binding domain DAES_RS08170 PF08291 Peptidase M15 DAES_RS08305 PF00271 Helicase conserved C-terminal domain DAES_RS08305 PF00176 SNF2 family N-terminal domain DAES_RS08320 PF00924 Mechanosensitive ion channel DAES_RS08320 PF05552 Conserved TM helix DAES_RS08325 PF01435 Peptidase family M48 DAES_RS08330 PF01699 Sodium/calcium exchanger protein DAES_RS08340 PF13439 Glycosyltransferase Family 4 DAES_RS08340 PF00534 Glycosyl transferases group 1 DAES_RS08355 PF18273 Type III R-M EcoP15I C-terminal domain DAES_RS08355 PF01555 DNA methylase DAES_RS08360 PF12762 ISXO2-like transposase domain DAES_RS08365 PF01555 DNA methylase DAES_RS08375 PF13458 Periplasmic binding protein DAES_RS08380 PF00072 Response regulator receiver domain DAES_RS08380 PF00989 PAS fold DAES_RS08380 PF01627 Hpt domain DAES_RS08380 PF18415 Histidine kinase receptor ArcB trans-membrane domain DAES_RS08380 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS08380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS08385 PF13677 Membrane MotB of proton-channel complex MotA/MotB DAES_RS08385 PF00691 OmpA family DAES_RS08390 PF00691 OmpA family DAES_RS08390 PF13677 Membrane MotB of proton-channel complex MotA/MotB DAES_RS08395 PF01618 MotA/TolQ/ExbB proton channel family DAES_RS08415 PF02525 Flavodoxin-like fold DAES_RS08420 PF02896 PEP-utilising enzyme, TIM barrel domain DAES_RS08420 PF00391 PEP-utilising enzyme, mobile domain DAES_RS08420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DAES_RS08425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DAES_RS08425 PF02785 Biotin carboxylase C-terminal domain DAES_RS08425 PF00289 Biotin carboxylase, N-terminal domain DAES_RS08435 PF01743 Poly A polymerase head domain DAES_RS08435 PF12627 Probable RNA and SrmB- binding site of polymerase A DAES_RS08435 PF01966 HD domain DAES_RS08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS08445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DAES_RS08445 PF00072 Response regulator receiver domain DAES_RS08445 PF01627 Hpt domain DAES_RS08445 PF00672 HAMP domain DAES_RS08445 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS08455 PF02629 CoA binding domain DAES_RS08455 PF00549 CoA-ligase DAES_RS08460 PF13439 Glycosyltransferase Family 4 DAES_RS08460 PF00534 Glycosyl transferases group 1 DAES_RS08470 PF17932 Tetracyclin repressor-like, C-terminal domain DAES_RS08470 PF00440 Bacterial regulatory proteins, tetR family DAES_RS08475 PF01458 Uncharacterized protein family (UPF0051) DAES_RS08480 PF00005 ABC transporter DAES_RS08490 PF01584 CheW-like domain DAES_RS08510 PF01842 ACT domain DAES_RS08515 PF00205 Thiamine pyrophosphate enzyme, central domain DAES_RS08515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DAES_RS08515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DAES_RS08525 PF02525 Flavodoxin-like fold DAES_RS08530 PF13654 AAA domain DAES_RS08530 PF05362 Lon protease (S16) C-terminal proteolytic domain DAES_RS08545 PF00563 EAL domain DAES_RS08545 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS08545 PF03707 Bacterial signalling protein N terminal repeat DAES_RS08555 PF04324 BFD-like [2Fe-2S] binding domain DAES_RS08555 PF01106 NifU-like domain DAES_RS08555 PF01592 NifU-like N terminal domain DAES_RS08560 PF00266 Aminotransferase class-V DAES_RS08565 PF00291 Pyridoxal-phosphate dependent enzyme DAES_RS08570 PF00132 Bacterial transferase hexapeptide (six repeats) DAES_RS08580 PF06827 Zinc finger found in FPG and IleRS DAES_RS08580 PF00133 tRNA synthetases class I (I, L, M and V) DAES_RS08580 PF08264 Anticodon-binding domain of tRNA DAES_RS08585 PF01252 Signal peptidase (SPase) II DAES_RS08615 PF03448 MgtE intracellular N domain DAES_RS08615 PF01769 Divalent cation transporter DAES_RS08615 PF00571 CBS domain DAES_RS08620 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DAES_RS08620 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DAES_RS08625 PF02445 Quinolinate synthetase A protein DAES_RS08630 PF02910 Fumarate reductase flavoprotein C-term DAES_RS08630 PF00890 FAD binding domain DAES_RS08635 PF02386 Cation transport protein DAES_RS08640 PF02080 TrkA-C domain DAES_RS08640 PF02254 TrkA-N domain DAES_RS08645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DAES_RS08645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DAES_RS08650 PF03147 Ferredoxin-fold anticodon binding domain DAES_RS08650 PF03483 B3/4 domain DAES_RS08650 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DAES_RS08650 PF03484 tRNA synthetase B5 domain DAES_RS08650 PF01588 Putative tRNA binding domain DAES_RS08665 PF13545 Crp-like helix-turn-helix domain DAES_RS08665 PF00027 Cyclic nucleotide-binding domain DAES_RS08670 PF01649 Ribosomal protein S20 DAES_RS08675 PF02092 Glycyl-tRNA synthetase beta subunit DAES_RS08675 PF05746 DALR anticodon binding domain DAES_RS08680 PF02091 Glycyl-tRNA synthetase alpha subunit DAES_RS08685 PF11967 Recombination protein O N terminal DAES_RS08685 PF02565 Recombination protein O C terminal DAES_RS08695 PF00639 PPIC-type PPIASE domain DAES_RS08695 PF09312 SurA N-terminal domain DAES_RS08705 PF17757 UvrB interaction domain DAES_RS08705 PF02559 CarD-like/TRCF domain DAES_RS08705 PF03461 TRCF domain DAES_RS08705 PF00270 DEAD/DEAH box helicase DAES_RS08705 PF00271 Helicase conserved C-terminal domain DAES_RS08710 PF01584 CheW-like domain DAES_RS08720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DAES_RS08720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DAES_RS08720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAES_RS08725 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DAES_RS08730 PF01648 4'-phosphopantetheinyl transferase superfamily DAES_RS08735 PF01256 Carbohydrate kinase DAES_RS08735 PF03853 YjeF-related protein N-terminus DAES_RS08740 PF00571 CBS domain DAES_RS08740 PF00478 IMP dehydrogenase / GMP reductase domain DAES_RS08750 PF13840 ACT domain DAES_RS08750 PF01842 ACT domain DAES_RS08750 PF00696 Amino acid kinase family DAES_RS08755 PF08502 LeuA allosteric (dimerisation) domain DAES_RS08755 PF00682 HMGL-like DAES_RS08765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DAES_RS08765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DAES_RS08770 PF01975 Survival protein SurE DAES_RS08775 PF01966 HD domain DAES_RS08780 PF02223 Thymidylate kinase DAES_RS08785 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS08790 PF00497 Bacterial extracellular solute-binding proteins, family 3 DAES_RS08795 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS08810 PF02163 Peptidase family M50 DAES_RS08810 PF13180 PDZ domain DAES_RS08815 PF01053 Cys/Met metabolism PLP-dependent enzyme DAES_RS08820 PF01134 Glucose inhibited division protein A DAES_RS08825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DAES_RS08825 PF00005 ABC transporter DAES_RS08830 PF00005 ABC transporter DAES_RS08830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DAES_RS08845 PF00005 ABC transporter DAES_RS08850 PF01554 MatE DAES_RS08870 PF13361 UvrD-like helicase C-terminal domain DAES_RS08870 PF00580 UvrD/REP helicase N-terminal domain DAES_RS08875 PF02769 AIR synthase related protein, C-terminal domain DAES_RS08875 PF00586 AIR synthase related protein, N-terminal domain DAES_RS08880 PF18389 TrmO C-terminal domain DAES_RS08880 PF01980 tRNA-methyltransferase O DAES_RS08885 PF00561 alpha/beta hydrolase fold DAES_RS08885 PF08386 TAP-like protein DAES_RS08890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DAES_RS08895 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DAES_RS08895 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DAES_RS08900 PF10369 Small subunit of acetolactate synthase DAES_RS08900 PF01842 ACT domain DAES_RS08905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DAES_RS08905 PF00205 Thiamine pyrophosphate enzyme, central domain DAES_RS08905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DAES_RS08915 PF02594 Uncharacterised ACR, YggU family COG1872 DAES_RS08945 PF02416 mttA/Hcf106 family DAES_RS08970 PF01467 Cytidylyltransferase-like DAES_RS08980 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DAES_RS08980 PF00753 Metallo-beta-lactamase superfamily DAES_RS08980 PF10996 Beta-Casp domain DAES_RS08985 PF03641 Possible lysine decarboxylase DAES_RS08990 PF00892 EamA-like transporter family DAES_RS08995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS08995 PF12729 Four helix bundle sensory module for signal transduction DAES_RS08995 PF00672 HAMP domain DAES_RS09005 PF01676 Metalloenzyme superfamily DAES_RS09005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DAES_RS09020 PF00501 AMP-binding enzyme DAES_RS09020 PF14535 AMP-binding enzyme C-terminal domain DAES_RS09030 PF01139 tRNA-splicing ligase RtcB DAES_RS09045 PF01554 MatE DAES_RS09050 PF13091 PLD-like domain DAES_RS09050 PF13396 Phospholipase_D-nuclease N-terminal DAES_RS09055 PF12762 ISXO2-like transposase domain DAES_RS09060 PF05173 Dihydrodipicolinate reductase, C-terminus DAES_RS09060 PF01113 Dihydrodipicolinate reductase, N-terminus DAES_RS09065 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DAES_RS09065 PF12826 Helix-hairpin-helix motif DAES_RS09065 PF03120 NAD-dependent DNA ligase OB-fold domain DAES_RS09065 PF01653 NAD-dependent DNA ligase adenylation domain DAES_RS09065 PF00533 BRCA1 C Terminus (BRCT) domain DAES_RS09070 PF00271 Helicase conserved C-terminal domain DAES_RS09070 PF04851 Type III restriction enzyme, res subunit DAES_RS09070 PF02151 UvrB/uvrC motif DAES_RS09070 PF12344 Ultra-violet resistance protein B DAES_RS09070 PF17757 UvrB interaction domain DAES_RS09080 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DAES_RS09085 PF17871 AAA lid domain DAES_RS09085 PF02861 Clp amino terminal domain, pathogenicity island component DAES_RS09085 PF10431 C-terminal, D2-small domain, of ClpB protein DAES_RS09085 PF00004 ATPase family associated with various cellular activities (AAA) DAES_RS09085 PF07724 AAA domain (Cdc48 subfamily) DAES_RS09090 PF02617 ATP-dependent Clp protease adaptor protein ClpS DAES_RS09100 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DAES_RS09105 PF02641 Uncharacterized ACR, COG1993 DAES_RS09110 PF01339 CheB methylesterase DAES_RS09110 PF00072 Response regulator receiver domain DAES_RS09115 PF01584 CheW-like domain DAES_RS09115 PF02895 Signal transducing histidine kinase, homodimeric domain DAES_RS09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS09115 PF01627 Hpt domain DAES_RS09120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS09120 PF13426 PAS domain DAES_RS09120 PF00672 HAMP domain DAES_RS09130 PF03144 Elongation factor Tu domain 2 DAES_RS09130 PF00679 Elongation factor G C-terminus DAES_RS09130 PF00009 Elongation factor Tu GTP binding domain DAES_RS09130 PF14492 Elongation Factor G, domain II DAES_RS09130 PF03764 Elongation factor G, domain IV DAES_RS09140 PF13525 Outer membrane lipoprotein DAES_RS09145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS09150 PF00085 Thioredoxin DAES_RS09155 PF00814 Glycoprotease family DAES_RS09160 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DAES_RS09185 PF01066 CDP-alcohol phosphatidyltransferase DAES_RS09190 PF10609 NUBPL iron-transfer P-loop NTPase DAES_RS09220 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DAES_RS09220 PF00591 Glycosyl transferase family, a/b domain DAES_RS09220 PF02885 Glycosyl transferase family, helical bundle domain DAES_RS09225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DAES_RS09230 PF00004 ATPase family associated with various cellular activities (AAA) DAES_RS09230 PF05362 Lon protease (S16) C-terminal proteolytic domain DAES_RS09230 PF02190 ATP-dependent protease La (LON) substrate-binding domain DAES_RS09235 PF10431 C-terminal, D2-small domain, of ClpB protein DAES_RS09235 PF06689 ClpX C4-type zinc finger DAES_RS09235 PF07724 AAA domain (Cdc48 subfamily) DAES_RS09240 PF00574 Clp protease DAES_RS09245 PF05698 Bacterial trigger factor protein (TF) C-terminus DAES_RS09245 PF05697 Bacterial trigger factor protein (TF) DAES_RS09245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DAES_RS09255 PF08543 Phosphomethylpyrimidine kinase DAES_RS09275 PF05443 ROS/MUCR transcriptional regulator protein DAES_RS09305 PF00152 tRNA synthetases class II (D, K and N) DAES_RS09305 PF01336 OB-fold nucleic acid binding domain DAES_RS09310 PF00448 SRP54-type protein, GTPase domain DAES_RS09310 PF02881 SRP54-type protein, helical bundle domain DAES_RS09315 PF00575 S1 RNA binding domain DAES_RS09320 PF00849 RNA pseudouridylate synthase DAES_RS09330 PF13361 UvrD-like helicase C-terminal domain DAES_RS09330 PF00580 UvrD/REP helicase N-terminal domain DAES_RS09330 PF12705 PD-(D/E)XK nuclease superfamily DAES_RS09345 PF01266 FAD dependent oxidoreductase DAES_RS09350 PF03060 Nitronate monooxygenase DAES_RS09355 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DAES_RS09360 PF02899 Phage integrase, N-terminal SAM-like domain DAES_RS09360 PF00589 Phage integrase family DAES_RS09370 PF00013 KH domain DAES_RS09370 PF12072 Domain of unknown function (DUF3552) DAES_RS09370 PF01966 HD domain DAES_RS09380 PF17782 DprA winged helix domain DAES_RS09380 PF02481 DNA recombination-mediator protein A DAES_RS09400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS09400 PF01627 Hpt domain DAES_RS09400 PF00072 Response regulator receiver domain DAES_RS09400 PF02895 Signal transducing histidine kinase, homodimeric domain DAES_RS09400 PF01627 Hpt domain DAES_RS09400 PF00072 Response regulator receiver domain DAES_RS09400 PF02895 Signal transducing histidine kinase, homodimeric domain DAES_RS09400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS09400 PF01584 CheW-like domain DAES_RS09400 PF01584 CheW-like domain DAES_RS09405 PF00072 Response regulator receiver domain DAES_RS09410 PF03705 CheR methyltransferase, all-alpha domain DAES_RS09410 PF01739 CheR methyltransferase, SAM binding domain DAES_RS09420 PF00072 Response regulator receiver domain DAES_RS09420 PF01339 CheB methylesterase DAES_RS09450 PF02384 N-6 DNA Methylase DAES_RS09455 PF07669 Eco57I restriction-modification methylase DAES_RS09470 PF01527 Transposase DAES_RS09475 PF03062 MBOAT, membrane-bound O-acyltransferase family DAES_RS09485 PF12708 Pectate lyase superfamily protein DAES_RS09485 PF13229 Right handed beta helix region DAES_RS09485 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DAES_RS09495 PF00535 Glycosyl transferase family 2 DAES_RS09510 PF07670 Nucleoside recognition DAES_RS09510 PF04023 FeoA domain DAES_RS09510 PF07664 Ferrous iron transport protein B C terminus DAES_RS09510 PF17910 FeoB cytosolic helical domain DAES_RS09510 PF02421 Ferrous iron transport protein B DAES_RS09515 PF04023 FeoA domain DAES_RS09525 PF01475 Ferric uptake regulator family DAES_RS09530 PF01475 Ferric uptake regulator family DAES_RS09540 PF09967 VWA-like domain (DUF2201) DAES_RS09540 PF13203 Putative metallopeptidase domain DAES_RS09550 PF09345 Domain of unknown function (DUF1987) DAES_RS09565 PF00072 Response regulator receiver domain DAES_RS09565 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS09575 PF03313 Serine dehydratase alpha chain DAES_RS09575 PF03315 Serine dehydratase beta chain DAES_RS09580 PF00005 ABC transporter DAES_RS09585 PF00497 Bacterial extracellular solute-binding proteins, family 3 DAES_RS09590 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS09605 PF02085 Class III cytochrome C family DAES_RS09610 PF00180 Isocitrate/isopropylmalate dehydrogenase DAES_RS09615 PF00694 Aconitase C-terminal domain DAES_RS09620 PF00330 Aconitase family (aconitate hydratase) DAES_RS09625 PF00682 HMGL-like DAES_RS09625 PF08502 LeuA allosteric (dimerisation) domain DAES_RS09630 PF01066 CDP-alcohol phosphatidyltransferase DAES_RS09635 PF02666 Phosphatidylserine decarboxylase DAES_RS09670 PF01258 Prokaryotic dksA/traR C4-type zinc finger DAES_RS09685 PF00730 HhH-GPD superfamily base excision DNA repair protein DAES_RS09685 PF14815 NUDIX domain DAES_RS09685 PF00633 Helix-hairpin-helix motif DAES_RS09690 PF00300 Histidine phosphatase superfamily (branch 1) DAES_RS09700 PF00535 Glycosyl transferase family 2 DAES_RS09725 PF00994 Probable molybdopterin binding domain DAES_RS09735 PF00483 Nucleotidyl transferase DAES_RS09780 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DAES_RS09795 PF01527 Transposase DAES_RS09810 PF02001 Protein of unknown function DUF134 DAES_RS09860 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS09860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DAES_RS09865 PF01645 Conserved region in glutamate synthase DAES_RS09865 PF13187 4Fe-4S dicluster domain DAES_RS09880 PF02082 Transcriptional regulator DAES_RS09890 PF01594 AI-2E family transporter DAES_RS09895 PF00497 Bacterial extracellular solute-binding proteins, family 3 DAES_RS09900 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS09905 PF00005 ABC transporter DAES_RS09950 PF02779 Transketolase, pyrimidine binding domain DAES_RS09950 PF02780 Transketolase, C-terminal domain DAES_RS09950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DAES_RS09955 PF00456 Transketolase, thiamine diphosphate binding domain DAES_RS09960 PF01370 NAD dependent epimerase/dehydratase family DAES_RS09965 PF13580 SIS domain DAES_RS09975 PF01467 Cytidylyltransferase-like DAES_RS09975 PF00294 pfkB family carbohydrate kinase DAES_RS09990 PF00535 Glycosyl transferase family 2 DAES_RS10005 PF16363 GDP-mannose 4,6 dehydratase DAES_RS10010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DAES_RS10015 PF03102 NeuB family DAES_RS10015 PF08666 SAF domain DAES_RS10020 PF02350 UDP-N-acetylglucosamine 2-epimerase DAES_RS10025 PF00483 Nucleotidyl transferase DAES_RS10030 PF05173 Dihydrodipicolinate reductase, C-terminus DAES_RS10030 PF01113 Dihydrodipicolinate reductase, N-terminus DAES_RS10035 PF13472 GDSL-like Lipase/Acylhydrolase family DAES_RS10035 PF02348 Cytidylyltransferase DAES_RS10045 PF00977 Histidine biosynthesis protein DAES_RS10050 PF00117 Glutamine amidotransferase class-I DAES_RS10070 PF08446 PAS fold DAES_RS10070 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS10070 PF00360 Phytochrome region DAES_RS10070 PF01590 GAF domain DAES_RS10075 PF00072 Response regulator receiver domain DAES_RS10080 PF08446 PAS fold DAES_RS10080 PF01590 GAF domain DAES_RS10080 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS10080 PF00360 Phytochrome region DAES_RS10085 PF00989 PAS fold DAES_RS10085 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS10085 PF16736 Single Cache-like DAES_RS10085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS10105 PF17910 FeoB cytosolic helical domain DAES_RS10105 PF07670 Nucleoside recognition DAES_RS10105 PF04023 FeoA domain DAES_RS10105 PF02421 Ferrous iron transport protein B DAES_RS10105 PF07664 Ferrous iron transport protein B C terminus DAES_RS10110 PF16360 GTP-binding GTPase Middle Region DAES_RS10110 PF13167 GTP-binding GTPase N-terminal DAES_RS10110 PF01926 50S ribosome-binding GTPase DAES_RS10115 PF01808 AICARFT/IMPCHase bienzyme DAES_RS10115 PF02142 MGS-like domain DAES_RS10125 PF00460 Flagella basal body rod protein DAES_RS10130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS10130 PF00460 Flagella basal body rod protein DAES_RS10135 PF02049 Flagellar hook-basal body complex protein FliE DAES_RS10140 PF01514 Secretory protein of YscJ/FliF family DAES_RS10140 PF08345 Flagellar M-ring protein C-terminal DAES_RS10145 PF14841 FliG middle domain DAES_RS10145 PF01706 FliG C-terminal domain DAES_RS10145 PF14842 FliG N-terminal domain DAES_RS10155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DAES_RS10155 PF02874 ATP synthase alpha/beta family, beta-barrel domain DAES_RS10155 PF18269 T3SS EscN ATPase C-terminal domain DAES_RS10160 PF01451 Low molecular weight phosphotyrosine protein phosphatase DAES_RS10170 PF13411 MerR HTH family regulatory protein DAES_RS10175 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DAES_RS10175 PF03483 B3/4 domain DAES_RS10175 PF01588 Putative tRNA binding domain DAES_RS10175 PF03484 tRNA synthetase B5 domain DAES_RS10175 PF03147 Ferredoxin-fold anticodon binding domain DAES_RS10180 PF01409 tRNA synthetases class II core domain (F) DAES_RS10180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DAES_RS10185 PF00453 Ribosomal protein L20 DAES_RS10190 PF01632 Ribosomal protein L35 DAES_RS10195 PF05198 Translation initiation factor IF-3, N-terminal domain DAES_RS10195 PF00707 Translation initiation factor IF-3, C-terminal domain DAES_RS10200 PF03129 Anticodon binding domain DAES_RS10200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DAES_RS10200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DAES_RS10235 PF13237 4Fe-4S dicluster domain DAES_RS10245 PF12727 PBP superfamily domain DAES_RS10250 PF00857 Isochorismatase family DAES_RS10255 PF02310 B12 binding domain DAES_RS10255 PF13282 Domain of unknown function (DUF4070) DAES_RS10255 PF04055 Radical SAM superfamily DAES_RS10260 PF09334 tRNA synthetases class I (M) DAES_RS10260 PF01588 Putative tRNA binding domain DAES_RS10270 PF01042 Endoribonuclease L-PSP DAES_RS10275 PF01791 DeoC/LacD family aldolase DAES_RS10285 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DAES_RS10285 PF01464 Transglycosylase SLT domain DAES_RS10305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DAES_RS10320 PF00474 Sodium:solute symporter family DAES_RS10345 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS10350 PF12911 N-terminal TM domain of oligopeptide transport permease C DAES_RS10350 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS10355 PF00005 ABC transporter DAES_RS10355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DAES_RS10360 PF00005 ABC transporter DAES_RS10360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DAES_RS10365 PF01527 Transposase DAES_RS10375 PF00486 Transcriptional regulatory protein, C terminal DAES_RS10375 PF00072 Response regulator receiver domain DAES_RS10380 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS10380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAES_RS10385 PF00155 Aminotransferase class I and II DAES_RS10395 PF05681 Fumarate hydratase (Fumerase) DAES_RS10395 PF05683 Fumarase C-terminus DAES_RS10400 PF05681 Fumarate hydratase (Fumerase) DAES_RS10405 PF13085 2Fe-2S iron-sulfur cluster binding domain DAES_RS10405 PF13183 4Fe-4S dicluster domain DAES_RS10410 PF00890 FAD binding domain DAES_RS10410 PF02910 Fumarate reductase flavoprotein C-term DAES_RS10415 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DAES_RS10420 PF00675 Insulinase (Peptidase family M16) DAES_RS10420 PF05193 Peptidase M16 inactive domain DAES_RS10430 PF01264 Chorismate synthase DAES_RS10435 PF02254 TrkA-N domain DAES_RS10435 PF02080 TrkA-C domain DAES_RS10440 PF02824 TGS domain DAES_RS10440 PF13291 ACT domain DAES_RS10440 PF04607 Region found in RelA / SpoT proteins DAES_RS10445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DAES_RS10450 PF00176 SNF2 family N-terminal domain DAES_RS10450 PF12419 SNF2 Helicase protein DAES_RS10450 PF00271 Helicase conserved C-terminal domain DAES_RS10465 PF00436 Single-strand binding protein family DAES_RS10480 PF17848 Acetyl-coA carboxylase zinc finger domain DAES_RS10480 PF01039 Carboxyl transferase domain DAES_RS10485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DAES_RS10485 PF02785 Biotin carboxylase C-terminal domain DAES_RS10485 PF00289 Biotin carboxylase, N-terminal domain DAES_RS10495 PF00691 OmpA family DAES_RS10495 PF13677 Membrane MotB of proton-channel complex MotA/MotB DAES_RS10500 PF01618 MotA/TolQ/ExbB proton channel family DAES_RS10505 PF01048 Phosphorylase superfamily DAES_RS10520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DAES_RS10525 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DAES_RS10525 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DAES_RS10525 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DAES_RS10535 PF02570 Precorrin-8X methylmutase DAES_RS10540 PF01791 DeoC/LacD family aldolase DAES_RS10545 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS10550 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS10555 PF00497 Bacterial extracellular solute-binding proteins, family 3 DAES_RS10560 PF00005 ABC transporter DAES_RS10565 PF13533 Biotin-lipoyl like DAES_RS10570 PF00873 AcrB/AcrD/AcrF family DAES_RS10575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DAES_RS10580 PF02535 ZIP Zinc transporter DAES_RS10585 PF07969 Amidohydrolase family DAES_RS10590 PF03916 Polysulphide reductase, NrfD DAES_RS10595 PF13247 4Fe-4S dicluster domain DAES_RS10595 PF00037 4Fe-4S binding domain DAES_RS10600 PF01568 Molydopterin dinucleotide binding domain DAES_RS10600 PF00384 Molybdopterin oxidoreductase DAES_RS10605 PF02085 Class III cytochrome C family DAES_RS10610 PF00483 Nucleotidyl transferase DAES_RS10610 PF01050 Mannose-6-phosphate isomerase DAES_RS10615 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DAES_RS10625 PF03819 MazG nucleotide pyrophosphohydrolase domain DAES_RS10635 PF13478 XdhC Rossmann domain DAES_RS10635 PF02625 XdhC and CoxI family DAES_RS10640 PF12804 MobA-like NTP transferase domain DAES_RS10660 PF01475 Ferric uptake regulator family DAES_RS10670 PF02110 Hydroxyethylthiazole kinase family DAES_RS10675 PF00271 Helicase conserved C-terminal domain DAES_RS10675 PF00270 DEAD/DEAH box helicase DAES_RS10685 PF01925 Sulfite exporter TauE/SafE DAES_RS10695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DAES_RS10695 PF01926 50S ribosome-binding GTPase DAES_RS10700 PF00672 HAMP domain DAES_RS10700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS10700 PF13426 PAS domain DAES_RS10705 PF01008 Initiation factor 2 subunit family DAES_RS10710 PF02934 GatB/GatE catalytic domain DAES_RS10710 PF02637 GatB domain DAES_RS10730 PF01513 ATP-NAD kinase DAES_RS10745 PF02623 FliW protein DAES_RS10750 PF02599 Global regulator protein family DAES_RS10760 PF00460 Flagella basal body rod protein DAES_RS10760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS10760 PF00460 Flagella basal body rod protein DAES_RS10760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS10775 PF02119 Flagellar P-ring protein DAES_RS10780 PF02107 Flagellar L-ring protein DAES_RS10790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS10790 PF00460 Flagella basal body rod protein DAES_RS10795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS10795 PF00460 Flagella basal body rod protein DAES_RS10805 PF17384 RimP C-terminal SH3 domain DAES_RS10805 PF02576 RimP N-terminal domain DAES_RS10810 PF08529 NusA N-terminal domain DAES_RS10810 PF00575 S1 RNA binding domain DAES_RS10810 PF13184 NusA-like KH domain DAES_RS10820 PF00009 Elongation factor Tu GTP binding domain DAES_RS10820 PF11987 Translation-initiation factor 2 DAES_RS10820 PF04760 Translation initiation factor IF-2, N-terminal region DAES_RS10820 PF00009 Elongation factor Tu GTP binding domain DAES_RS10820 PF04760 Translation initiation factor IF-2, N-terminal region DAES_RS10820 PF11987 Translation-initiation factor 2 DAES_RS10830 PF02033 Ribosome-binding factor A DAES_RS10840 PF16198 tRNA pseudouridylate synthase B C-terminal domain DAES_RS10840 PF01509 TruB family pseudouridylate synthase (N terminal domain) DAES_RS10845 PF00312 Ribosomal protein S15 DAES_RS10850 PF01138 3' exoribonuclease family, domain 1 DAES_RS10850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DAES_RS10850 PF00013 KH domain DAES_RS10850 PF00575 S1 RNA binding domain DAES_RS10850 PF03725 3' exoribonuclease family, domain 2 DAES_RS10855 PF01875 Memo-like protein DAES_RS10865 PF00158 Sigma-54 interaction domain DAES_RS10865 PF02954 Bacterial regulatory protein, Fis family DAES_RS10865 PF06490 Flagellar regulatory protein FleQ DAES_RS10890 PF02649 Type I GTP cyclohydrolase folE2 DAES_RS10895 PF01402 Ribbon-helix-helix protein, copG family DAES_RS10895 PF08753 NikR C terminal nickel binding domain DAES_RS10905 PF01597 Glycine cleavage H-protein DAES_RS10910 PF02347 Glycine cleavage system P-protein DAES_RS10915 PF02347 Glycine cleavage system P-protein DAES_RS10920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAES_RS10920 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS10945 PF03313 Serine dehydratase alpha chain DAES_RS10960 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DAES_RS10960 PF17770 Ribonuclease J C-terminal domain DAES_RS10960 PF00753 Metallo-beta-lactamase superfamily DAES_RS10970 PF03144 Elongation factor Tu domain 2 DAES_RS10970 PF00009 Elongation factor Tu GTP binding domain DAES_RS10970 PF03764 Elongation factor G, domain IV DAES_RS10970 PF00679 Elongation factor G C-terminus DAES_RS10970 PF14492 Elongation Factor G, domain II DAES_RS11000 PF00318 Ribosomal protein S2 DAES_RS11005 PF00889 Elongation factor TS DAES_RS11010 PF00696 Amino acid kinase family DAES_RS11015 PF01765 Ribosome recycling factor DAES_RS11020 PF01255 Putative undecaprenyl diphosphate synthase DAES_RS11030 PF13288 DXP reductoisomerase C-terminal domain DAES_RS11030 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DAES_RS11030 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DAES_RS11035 PF02163 Peptidase family M50 DAES_RS11035 PF17820 PDZ domain DAES_RS11040 PF00814 Glycoprotease family DAES_RS11045 PF00308 Bacterial dnaA protein DAES_RS11045 PF08299 Bacterial dnaA protein helix-turn-helix DAES_RS11045 PF11638 DnaA N-terminal domain DAES_RS11050 PF02511 Thymidylate synthase complementing protein DAES_RS11080 PF00669 Bacterial flagellin N-terminal helical region DAES_RS11080 PF00700 Bacterial flagellin C-terminal helical region DAES_RS11085 PF02465 Flagellar hook-associated protein 2 N-terminus DAES_RS11085 PF07195 Flagellar hook-associated protein 2 C-terminus DAES_RS11085 PF07196 Flagellin hook IN motif DAES_RS11095 PF13439 Glycosyltransferase Family 4 DAES_RS11095 PF00534 Glycosyl transferases group 1 DAES_RS11115 PF01389 OmpA-like transmembrane domain DAES_RS11115 PF00691 OmpA family DAES_RS11120 PF13186 Iron-sulfur cluster-binding domain DAES_RS11120 PF04055 Radical SAM superfamily DAES_RS11125 PF00490 Delta-aminolevulinic acid dehydratase DAES_RS11130 PF04055 Radical SAM superfamily DAES_RS11130 PF13186 Iron-sulfur cluster-binding domain DAES_RS11135 PF13404 AsnC-type helix-turn-helix domain DAES_RS11135 PF17805 AsnC-like ligand binding domain DAES_RS11145 PF00834 Ribulose-phosphate 3 epimerase family DAES_RS11150 PF12848 ABC transporter DAES_RS11150 PF00005 ABC transporter DAES_RS11150 PF16326 ABC transporter C-terminal domain DAES_RS11160 PF00171 Aldehyde dehydrogenase family DAES_RS11165 PF01037 Lrp/AsnC ligand binding domain DAES_RS11170 PF02405 Permease MlaE DAES_RS11175 PF00005 ABC transporter DAES_RS11190 PF04751 Protein of unknown function (DUF615) DAES_RS11200 PF00892 EamA-like transporter family DAES_RS11205 PF02621 Menaquinone biosynthesis DAES_RS11215 PF04055 Radical SAM superfamily DAES_RS11220 PF04055 Radical SAM superfamily DAES_RS11230 PF03466 LysR substrate binding domain DAES_RS11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DAES_RS11235 PF01196 Ribosomal protein L17 DAES_RS11240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DAES_RS11240 PF01000 RNA polymerase Rpb3/RpoA insert domain DAES_RS11240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DAES_RS11245 PF01479 S4 domain DAES_RS11245 PF00163 Ribosomal protein S4/S9 N-terminal domain DAES_RS11250 PF00411 Ribosomal protein S11 DAES_RS11255 PF00416 Ribosomal protein S13/S18 DAES_RS11260 PF00557 Metallopeptidase family M24 DAES_RS11265 PF00344 SecY translocase DAES_RS11270 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DAES_RS11275 PF00327 Ribosomal protein L30p/L7e DAES_RS11280 PF00333 Ribosomal protein S5, N-terminal domain DAES_RS11280 PF03719 Ribosomal protein S5, C-terminal domain DAES_RS11285 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DAES_RS11290 PF00347 Ribosomal protein L6 DAES_RS11295 PF00410 Ribosomal protein S8 DAES_RS11300 PF00281 Ribosomal protein L5 DAES_RS11300 PF00673 ribosomal L5P family C-terminus DAES_RS11305 PF00467 KOW motif DAES_RS11305 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DAES_RS11310 PF00238 Ribosomal protein L14p/L23e DAES_RS11315 PF00366 Ribosomal protein S17 DAES_RS11320 PF00831 Ribosomal L29 protein DAES_RS11325 PF00252 Ribosomal protein L16p/L10e DAES_RS11330 PF00189 Ribosomal protein S3, C-terminal domain DAES_RS11330 PF07650 KH domain DAES_RS11335 PF00237 Ribosomal protein L22p/L17e DAES_RS11340 PF00203 Ribosomal protein S19 DAES_RS11345 PF03947 Ribosomal Proteins L2, C-terminal domain DAES_RS11345 PF00181 Ribosomal Proteins L2, RNA binding domain DAES_RS11350 PF00276 Ribosomal protein L23 DAES_RS11355 PF00573 Ribosomal protein L4/L1 family DAES_RS11360 PF00297 Ribosomal protein L3 DAES_RS11365 PF00338 Ribosomal protein S10p/S20e DAES_RS11370 PF00009 Elongation factor Tu GTP binding domain DAES_RS11370 PF03764 Elongation factor G, domain IV DAES_RS11370 PF14492 Elongation Factor G, domain II DAES_RS11370 PF00679 Elongation factor G C-terminus DAES_RS11370 PF03144 Elongation factor Tu domain 2 DAES_RS11375 PF00177 Ribosomal protein S7p/S5e DAES_RS11380 PF00164 Ribosomal protein S12/S23 DAES_RS11385 PF04998 RNA polymerase Rpb1, domain 5 DAES_RS11385 PF05000 RNA polymerase Rpb1, domain 4 DAES_RS11385 PF04983 RNA polymerase Rpb1, domain 3 DAES_RS11385 PF00623 RNA polymerase Rpb1, domain 2 DAES_RS11385 PF04997 RNA polymerase Rpb1, domain 1 DAES_RS11390 PF04561 RNA polymerase Rpb2, domain 2 DAES_RS11390 PF04560 RNA polymerase Rpb2, domain 7 DAES_RS11390 PF00562 RNA polymerase Rpb2, domain 6 DAES_RS11390 PF10385 RNA polymerase beta subunit external 1 domain DAES_RS11390 PF04565 RNA polymerase Rpb2, domain 3 DAES_RS11390 PF04563 RNA polymerase beta subunit DAES_RS11395 PF16320 Ribosomal protein L7/L12 dimerisation domain DAES_RS11395 PF00542 Ribosomal protein L7/L12 C-terminal domain DAES_RS11400 PF00466 Ribosomal protein L10 DAES_RS11405 PF00687 Ribosomal protein L1p/L10e family DAES_RS11410 PF03946 Ribosomal protein L11, N-terminal domain DAES_RS11410 PF00298 Ribosomal protein L11, RNA binding domain DAES_RS11415 PF00467 KOW motif DAES_RS11415 PF02357 Transcription termination factor nusG DAES_RS11420 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DAES_RS11430 PF00471 Ribosomal protein L33 DAES_RS11435 PF03144 Elongation factor Tu domain 2 DAES_RS11435 PF00009 Elongation factor Tu GTP binding domain DAES_RS11435 PF03143 Elongation factor Tu C-terminal domain DAES_RS11460 PF01207 Dihydrouridine synthase (Dus) DAES_RS11465 PF00072 Response regulator receiver domain DAES_RS11465 PF01584 CheW-like domain DAES_RS11470 PF00586 AIR synthase related protein, N-terminal domain DAES_RS11470 PF02769 AIR synthase related protein, C-terminal domain DAES_RS11475 PF01924 Hydrogenase formation hypA family DAES_RS11495 PF07478 D-ala D-ala ligase C-terminus DAES_RS11505 PF02348 Cytidylyltransferase DAES_RS11510 PF00117 Glutamine amidotransferase class-I DAES_RS11510 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DAES_RS11520 PF00890 FAD binding domain DAES_RS11520 PF02910 Fumarate reductase flavoprotein C-term DAES_RS11530 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DAES_RS11535 PF00293 NUDIX domain DAES_RS11540 PF01300 Telomere recombination DAES_RS11545 PF00588 SpoU rRNA Methylase family DAES_RS11545 PF12105 SpoU, rRNA methylase, C-terminal DAES_RS11550 PF02954 Bacterial regulatory protein, Fis family DAES_RS11550 PF00072 Response regulator receiver domain DAES_RS11550 PF00158 Sigma-54 interaction domain DAES_RS11560 PF01627 Hpt domain DAES_RS11560 PF01584 CheW-like domain DAES_RS11560 PF02895 Signal transducing histidine kinase, homodimeric domain DAES_RS11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS11560 PF07194 P2 response regulator binding domain DAES_RS11565 PF06180 Cobalt chelatase (CbiK) DAES_RS11570 PF01032 FecCD transport family DAES_RS11575 PF00005 ABC transporter DAES_RS11585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DAES_RS11590 PF06180 Cobalt chelatase (CbiK) DAES_RS11595 PF02773 S-adenosylmethionine synthetase, C-terminal domain DAES_RS11595 PF02772 S-adenosylmethionine synthetase, central domain DAES_RS11595 PF00438 S-adenosylmethionine synthetase, N-terminal domain DAES_RS11620 PF03099 Biotin/lipoate A/B protein ligase family DAES_RS11625 PF04055 Radical SAM superfamily DAES_RS11625 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DAES_RS11630 PF00027 Cyclic nucleotide-binding domain DAES_RS11630 PF13545 Crp-like helix-turn-helix domain DAES_RS11655 PF02272 DHHA1 domain DAES_RS11655 PF17768 RecJ OB domain DAES_RS11655 PF01368 DHH family DAES_RS11670 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DAES_RS11675 PF00625 Guanylate kinase DAES_RS11680 PF04025 Domain of unknown function (DUF370) DAES_RS11685 PF03755 YicC-like family, N-terminal region DAES_RS11685 PF08340 Domain of unknown function (DUF1732) DAES_RS11695 PF04055 Radical SAM superfamily DAES_RS11695 PF00919 Uncharacterized protein family UPF0004 DAES_RS11715 PF00465 Iron-containing alcohol dehydrogenase DAES_RS11720 PF03577 Peptidase family C69 DAES_RS11725 PF01425 Amidase DAES_RS11730 PF02686 Glu-tRNAGln amidotransferase C subunit DAES_RS11740 PF00012 Hsp70 protein DAES_RS11745 PF01025 GrpE DAES_RS11760 PF00561 alpha/beta hydrolase fold DAES_RS11765 PF07690 Major Facilitator Superfamily DAES_RS11770 PF00004 ATPase family associated with various cellular activities (AAA) DAES_RS11770 PF07724 AAA domain (Cdc48 subfamily) DAES_RS11770 PF17871 AAA lid domain DAES_RS11770 PF02861 Clp amino terminal domain, pathogenicity island component DAES_RS11770 PF10431 C-terminal, D2-small domain, of ClpB protein DAES_RS11780 PF00226 DnaJ domain DAES_RS11780 PF01556 DnaJ C terminal domain DAES_RS11785 PF04972 BON domain DAES_RS11790 PF01676 Metalloenzyme superfamily DAES_RS11790 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DAES_RS11800 PF00849 RNA pseudouridylate synthase DAES_RS11800 PF01479 S4 domain DAES_RS11810 PF00860 Permease family DAES_RS11815 PF00535 Glycosyl transferase family 2 DAES_RS11820 PF00924 Mechanosensitive ion channel DAES_RS11820 PF05552 Conserved TM helix DAES_RS11825 PF02684 Lipid-A-disaccharide synthetase DAES_RS11830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DAES_RS11830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DAES_RS11860 PF00291 Pyridoxal-phosphate dependent enzyme DAES_RS11865 PF00171 Aldehyde dehydrogenase family DAES_RS11885 PF00158 Sigma-54 interaction domain DAES_RS11885 PF01590 GAF domain DAES_RS11885 PF02954 Bacterial regulatory protein, Fis family DAES_RS11900 PF02709 N-terminal domain of galactosyltransferase DAES_RS11900 PF00535 Glycosyl transferase family 2 DAES_RS11915 PF00313 'Cold-shock' DNA-binding domain DAES_RS11920 PF00005 ABC transporter DAES_RS11925 PF04015 Domain of unknown function (DUF362) DAES_RS11930 PF01300 Telomere recombination DAES_RS11930 PF07503 HypF finger DAES_RS11930 PF00708 Acylphosphatase DAES_RS11930 PF17788 HypF Kae1-like domain DAES_RS11935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DAES_RS11935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DAES_RS11945 PF04073 Aminoacyl-tRNA editing domain DAES_RS11945 PF03129 Anticodon binding domain DAES_RS11945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DAES_RS11950 PF04551 GcpE protein DAES_RS11965 PF00374 Nickel-dependent hydrogenase DAES_RS11965 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DAES_RS11975 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DAES_RS11985 PF00361 Proton-conducting membrane transporter DAES_RS11985 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DAES_RS11985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DAES_RS11985 PF13244 Domain of unknown function (DUF4040) DAES_RS11990 PF01507 Phosphoadenosine phosphosulfate reductase family DAES_RS12005 PF13276 HTH-like domain DAES_RS12005 PF13683 Integrase core domain DAES_RS12010 PF01527 Transposase DAES_RS12040 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) DAES_RS12045 PF04865 Baseplate J-like protein DAES_RS12050 PF07409 Phage protein GP46 DAES_RS12055 PF06890 Bacteriophage Mu Gp45 protein DAES_RS12065 PF07157 DNA circularisation protein N-terminus DAES_RS12080 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 DAES_RS12090 PF04984 Phage tail sheath protein subtilisin-like domain DAES_RS12090 PF17482 Phage tail sheath C-terminal domain DAES_RS12120 PF10124 Mu-like prophage major head subunit gpT DAES_RS12140 PF06074 Protein of unknown function (DUF935) DAES_RS12145 PF03237 Terminase-like family DAES_RS12235 PF13401 AAA domain DAES_RS12235 PF01471 Putative peptidoglycan binding domain DAES_RS12265 PF00216 Bacterial DNA-binding protein DAES_RS12295 PF08765 Mor transcription activator family DAES_RS12300 PF02913 FAD linked oxidases, C-terminal domain DAES_RS12300 PF01565 FAD binding domain DAES_RS12305 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS12305 PF00989 PAS fold DAES_RS12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS12315 PF03652 Holliday junction resolvase DAES_RS12320 PF02618 YceG-like family DAES_RS12330 PF00535 Glycosyl transferase family 2 DAES_RS12335 PF01171 PP-loop family DAES_RS12345 PF00072 Response regulator receiver domain DAES_RS12350 PF00977 Histidine biosynthesis protein DAES_RS12365 PF01527 Transposase DAES_RS12370 PF12762 ISXO2-like transposase domain DAES_RS12380 PF00475 Imidazoleglycerol-phosphate dehydratase DAES_RS12390 PF02416 mttA/Hcf106 family DAES_RS12395 PF00117 Glutamine amidotransferase class-I DAES_RS12395 PF00958 GMP synthase C terminal domain DAES_RS12395 PF02540 NAD synthase DAES_RS12400 PF00478 IMP dehydrogenase / GMP reductase domain DAES_RS12400 PF00571 CBS domain DAES_RS12405 PF00005 ABC transporter DAES_RS12410 PF12399 Branched-chain amino acid ATP-binding cassette transporter DAES_RS12410 PF00005 ABC transporter DAES_RS12415 PF11862 Domain of unknown function (DUF3382) DAES_RS12415 PF02653 Branched-chain amino acid transport system / permease component DAES_RS12420 PF02653 Branched-chain amino acid transport system / permease component DAES_RS12425 PF13458 Periplasmic binding protein DAES_RS12435 PF01578 Cytochrome C assembly protein DAES_RS12445 PF00005 ABC transporter DAES_RS12450 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DAES_RS12450 PF01578 Cytochrome C assembly protein DAES_RS12455 PF03100 CcmE DAES_RS12460 PF01595 Cyclin M transmembrane N-terminal domain DAES_RS12460 PF00571 CBS domain DAES_RS12470 PF01467 Cytidylyltransferase-like DAES_RS12475 PF02163 Peptidase family M50 DAES_RS12480 PF00579 tRNA synthetases class I (W and Y) DAES_RS12485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DAES_RS12490 PF00155 Aminotransferase class I and II DAES_RS12495 PF04333 MlaA lipoprotein DAES_RS12505 PF01625 Peptide methionine sulfoxide reductase DAES_RS12505 PF01641 SelR domain DAES_RS12520 PF00873 AcrB/AcrD/AcrF family DAES_RS12525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DAES_RS12535 PF13361 UvrD-like helicase C-terminal domain DAES_RS12535 PF00570 HRDC domain DAES_RS12535 PF00580 UvrD/REP helicase N-terminal domain DAES_RS12555 PF09281 Taq polymerase, exonuclease DAES_RS12555 PF01367 5'-3' exonuclease, C-terminal SAM fold DAES_RS12555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DAES_RS12555 PF00476 DNA polymerase family A DAES_RS12560 PF01925 Sulfite exporter TauE/SafE DAES_RS12565 PF01070 FMN-dependent dehydrogenase DAES_RS12570 PF07729 FCD domain DAES_RS12570 PF00392 Bacterial regulatory proteins, gntR family DAES_RS12580 PF00149 Calcineurin-like phosphoesterase DAES_RS12585 PF04055 Radical SAM superfamily DAES_RS12590 PF03477 ATP cone domain DAES_RS12590 PF13597 Anaerobic ribonucleoside-triphosphate reductase DAES_RS12635 PF00156 Phosphoribosyl transferase domain DAES_RS12640 PF10397 Adenylosuccinate lyase C-terminus DAES_RS12640 PF00206 Lyase DAES_RS12665 PF00708 Acylphosphatase DAES_RS12670 PF13426 PAS domain DAES_RS12670 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS12670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS12670 PF00672 HAMP domain DAES_RS12675 PF00158 Sigma-54 interaction domain DAES_RS12675 PF00072 Response regulator receiver domain DAES_RS12675 PF02954 Bacterial regulatory protein, Fis family DAES_RS12680 PF01584 CheW-like domain DAES_RS12680 PF00072 Response regulator receiver domain DAES_RS12690 PF00072 Response regulator receiver domain DAES_RS12695 PF00072 Response regulator receiver domain DAES_RS12695 PF00486 Transcriptional regulatory protein, C terminal DAES_RS12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS12700 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB DAES_RS12700 PF08448 PAS fold DAES_RS12700 PF00672 HAMP domain DAES_RS12700 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS12715 PF01380 SIS domain DAES_RS12720 PF08722 TnsA endonuclease N terminal DAES_RS12720 PF08721 TnsA endonuclease C terminal DAES_RS12725 PF00665 Integrase core domain DAES_RS12730 PF11426 Tn7 transposition regulator TnsC DAES_RS12730 PF13401 AAA domain DAES_RS12735 PF01527 Transposase DAES_RS12785 PF13419 Haloacid dehalogenase-like hydrolase DAES_RS12790 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DAES_RS12790 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DAES_RS12795 PF00485 Phosphoribulokinase / Uridine kinase family DAES_RS12800 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DAES_RS12810 PF00158 Sigma-54 interaction domain DAES_RS12810 PF00072 Response regulator receiver domain DAES_RS12810 PF02954 Bacterial regulatory protein, Fis family DAES_RS12815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DAES_RS12815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DAES_RS12820 PF00834 Ribulose-phosphate 3 epimerase family DAES_RS12825 PF01116 Fructose-bisphosphate aldolase class-II DAES_RS12830 PF02887 Pyruvate kinase, alpha/beta domain DAES_RS12830 PF00224 Pyruvate kinase, barrel domain DAES_RS12835 PF00162 Phosphoglycerate kinase DAES_RS12840 PF00456 Transketolase, thiamine diphosphate binding domain DAES_RS12840 PF02780 Transketolase, C-terminal domain DAES_RS12840 PF02779 Transketolase, pyrimidine binding domain DAES_RS12845 PF01494 FAD binding domain DAES_RS12855 PF01527 Transposase DAES_RS12865 PF13683 Integrase core domain DAES_RS12865 PF13276 HTH-like domain DAES_RS12870 PF01527 Transposase DAES_RS12880 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DAES_RS12880 PF13542 Helix-turn-helix domain of transposase family ISL3 DAES_RS12880 PF01610 Transposase DAES_RS12885 PF05860 haemagglutination activity domain DAES_RS12885 PF13332 Hemagglutinin repeat DAES_RS12885 PF13018 Extended Signal Peptide of Type V secretion system DAES_RS12885 PF04829 Pre-toxin domain with VENN motif DAES_RS12890 PF17287 POTRA domain DAES_RS12890 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DAES_RS12890 PF08479 POTRA domain, ShlB-type DAES_RS12920 PF01926 50S ribosome-binding GTPase DAES_RS12920 PF10396 GTP-binding protein TrmE N-terminus DAES_RS12920 PF12631 MnmE helical domain DAES_RS12925 PF01424 R3H domain DAES_RS12925 PF14804 Jag N-terminus DAES_RS12930 PF14849 YidC periplasmic domain DAES_RS12930 PF02096 60Kd inner membrane protein DAES_RS12935 PF00825 Ribonuclease P DAES_RS12950 PF13545 Crp-like helix-turn-helix domain DAES_RS12950 PF00027 Cyclic nucleotide-binding domain DAES_RS12965 PF10518 TAT (twin-arginine translocation) pathway signal sequence DAES_RS12965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DAES_RS12965 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DAES_RS12970 PF00374 Nickel-dependent hydrogenase DAES_RS12975 PF01750 Hydrogenase maturation protease DAES_RS12980 PF01455 HupF/HypC family DAES_RS12985 PF00149 Calcineurin-like phosphoesterase DAES_RS12985 PF02872 5'-nucleotidase, C-terminal domain DAES_RS12990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DAES_RS12990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DAES_RS12995 PF06865 Pyrimidine/purine nucleoside phosphorylase DAES_RS13005 PF00072 Response regulator receiver domain DAES_RS13005 PF01966 HD domain DAES_RS13025 PF01212 Beta-eliminating lyase DAES_RS13030 PF03641 Possible lysine decarboxylase DAES_RS13040 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) DAES_RS13060 PF00166 Chaperonin 10 Kd subunit DAES_RS13065 PF00118 TCP-1/cpn60 chaperonin family DAES_RS13070 PF03992 Antibiotic biosynthesis monooxygenase DAES_RS13080 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DAES_RS13080 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DAES_RS13095 PF01758 Sodium Bile acid symporter family DAES_RS13120 PF01728 FtsJ-like methyltransferase DAES_RS13125 PF01709 Transcriptional regulator DAES_RS13130 PF02075 Crossover junction endodeoxyribonuclease RuvC DAES_RS13140 PF01330 RuvA N terminal domain DAES_RS13145 PF05491 RuvB C-terminal winged helix domain DAES_RS13145 PF17864 RuvB AAA lid domain DAES_RS13145 PF05496 Holliday junction DNA helicase RuvB P-loop domain DAES_RS13150 PF00301 Rubredoxin DAES_RS13160 PF00258 Flavodoxin DAES_RS13160 PF00753 Metallo-beta-lactamase superfamily DAES_RS13165 PF00005 ABC transporter DAES_RS13165 PF03459 TOBE domain DAES_RS13170 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS13185 PF01717 Cobalamin-independent synthase, Catalytic domain DAES_RS13185 PF08267 Cobalamin-independent synthase, N-terminal domain DAES_RS13190 PF13817 IS66 C-terminal element DAES_RS13190 PF13007 Transposase C of IS166 homeodomain DAES_RS13190 PF03050 Transposase IS66 family DAES_RS13190 PF13005 zinc-finger binding domain of transposase IS66 DAES_RS13200 PF08448 PAS fold DAES_RS13200 PF13426 PAS domain DAES_RS13200 PF05231 MASE1 DAES_RS13200 PF13426 PAS domain DAES_RS13200 PF00563 EAL domain DAES_RS13200 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS13200 PF00563 EAL domain DAES_RS13200 PF05231 MASE1 DAES_RS13200 PF08447 PAS fold DAES_RS13200 PF08448 PAS fold DAES_RS13200 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS13200 PF08447 PAS fold DAES_RS13205 PF01814 Hemerythrin HHE cation binding domain DAES_RS13230 PF08447 PAS fold DAES_RS13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS13230 PF08448 PAS fold DAES_RS13235 PF00072 Response regulator receiver domain DAES_RS13235 PF00158 Sigma-54 interaction domain DAES_RS13235 PF02954 Bacterial regulatory protein, Fis family DAES_RS13240 PF02954 Bacterial regulatory protein, Fis family DAES_RS13240 PF00158 Sigma-54 interaction domain DAES_RS13240 PF00072 Response regulator receiver domain DAES_RS13245 PF00072 Response regulator receiver domain DAES_RS13250 PF00072 Response regulator receiver domain DAES_RS13250 PF00158 Sigma-54 interaction domain DAES_RS13250 PF02954 Bacterial regulatory protein, Fis family DAES_RS13265 PF02085 Class III cytochrome C family DAES_RS13270 PF02754 Cysteine-rich domain DAES_RS13290 PF00158 Sigma-54 interaction domain DAES_RS13290 PF13426 PAS domain DAES_RS13290 PF02954 Bacterial regulatory protein, Fis family DAES_RS13305 PF00072 Response regulator receiver domain DAES_RS13305 PF00158 Sigma-54 interaction domain DAES_RS13305 PF02954 Bacterial regulatory protein, Fis family DAES_RS13315 PF00486 Transcriptional regulatory protein, C terminal DAES_RS13315 PF00072 Response regulator receiver domain DAES_RS13325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DAES_RS13330 PF13193 AMP-binding enzyme C-terminal domain DAES_RS13330 PF00501 AMP-binding enzyme DAES_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS13335 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS13335 PF09308 LuxQ, periplasmic DAES_RS13335 PF00072 Response regulator receiver domain DAES_RS13345 PF03591 AzlC protein DAES_RS13350 PF00392 Bacterial regulatory proteins, gntR family DAES_RS13350 PF00155 Aminotransferase class I and II DAES_RS13355 PF00892 EamA-like transporter family DAES_RS13360 PF01022 Bacterial regulatory protein, arsR family DAES_RS13375 PF17149 Periplasmic sensor domain found in signal transduction proteins DAES_RS13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS13375 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS13375 PF01627 Hpt domain DAES_RS13375 PF00672 HAMP domain DAES_RS13375 PF00072 Response regulator receiver domain DAES_RS13405 PF12633 Adenylate cyclase NT domain DAES_RS13405 PF01295 Adenylate cyclase, class-I DAES_RS13410 PF00950 ABC 3 transport family DAES_RS13415 PF00005 ABC transporter DAES_RS13425 PF01915 Glycosyl hydrolase family 3 C-terminal domain DAES_RS13425 PF00933 Glycosyl hydrolase family 3 N terminal domain DAES_RS13435 PF00291 Pyridoxal-phosphate dependent enzyme DAES_RS13440 PF02146 Sir2 family DAES_RS13445 PF00180 Isocitrate/isopropylmalate dehydrogenase DAES_RS13455 PF12437 Glutamine synthetase type III N terminal DAES_RS13455 PF00120 Glutamine synthetase, catalytic domain DAES_RS13455 PF18318 Glutamine synthetase C-terminal domain DAES_RS13460 PF00849 RNA pseudouridylate synthase DAES_RS13470 PF01272 Transcription elongation factor, GreA/GreB, C-term DAES_RS13470 PF03449 Transcription elongation factor, N-terminal DAES_RS13475 PF02608 ABC transporter substrate-binding protein PnrA-like DAES_RS13480 PF00005 ABC transporter DAES_RS13485 PF02653 Branched-chain amino acid transport system / permease component DAES_RS13490 PF02653 Branched-chain amino acid transport system / permease component DAES_RS13495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DAES_RS13495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DAES_RS13500 PF13660 Domain of unknown function (DUF4147) DAES_RS13500 PF05161 MOFRL family DAES_RS13505 PF01427 D-ala-D-ala dipeptidase DAES_RS13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS13515 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS13515 PF00989 PAS fold DAES_RS13520 PF02659 Putative manganese efflux pump DAES_RS13525 PF00072 Response regulator receiver domain DAES_RS13525 PF00158 Sigma-54 interaction domain DAES_RS13525 PF02954 Bacterial regulatory protein, Fis family DAES_RS13530 PF00072 Response regulator receiver domain DAES_RS13530 PF00158 Sigma-54 interaction domain DAES_RS13530 PF02954 Bacterial regulatory protein, Fis family DAES_RS13540 PF02954 Bacterial regulatory protein, Fis family DAES_RS13540 PF00072 Response regulator receiver domain DAES_RS13540 PF00158 Sigma-54 interaction domain DAES_RS13545 PF00158 Sigma-54 interaction domain DAES_RS13545 PF02954 Bacterial regulatory protein, Fis family DAES_RS13545 PF00072 Response regulator receiver domain DAES_RS13580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DAES_RS13580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DAES_RS13590 PF13579 Glycosyl transferase 4-like domain DAES_RS13590 PF00534 Glycosyl transferases group 1 DAES_RS13600 PF00343 Carbohydrate phosphorylase DAES_RS13600 PF11897 Protein of unknown function (DUF3417) DAES_RS13605 PF00158 Sigma-54 interaction domain DAES_RS13605 PF00072 Response regulator receiver domain DAES_RS13605 PF02954 Bacterial regulatory protein, Fis family DAES_RS13620 PF04055 Radical SAM superfamily DAES_RS13620 PF12544 Lysine-2,3-aminomutase DAES_RS13625 PF07478 D-ala D-ala ligase C-terminus DAES_RS13625 PF01820 D-ala D-ala ligase N-terminus DAES_RS13630 PF07478 D-ala D-ala ligase C-terminus DAES_RS13630 PF01820 D-ala D-ala ligase N-terminus DAES_RS13640 PF00850 Histone deacetylase domain DAES_RS13645 PF00300 Histidine phosphatase superfamily (branch 1) DAES_RS13650 PF02358 Trehalose-phosphatase DAES_RS13650 PF03636 Glycosyl hydrolase family 65, N-terminal domain DAES_RS13650 PF03632 Glycosyl hydrolase family 65 central catalytic domain DAES_RS13650 PF03633 Glycosyl hydrolase family 65, C-terminal domain DAES_RS13665 PF00360 Phytochrome region DAES_RS13665 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS13665 PF01590 GAF domain DAES_RS13665 PF00563 EAL domain DAES_RS13675 PF17876 Cold shock domain DAES_RS13675 PF08461 Ribonuclease R winged-helix domain DAES_RS13675 PF08206 Ribonuclease B OB domain DAES_RS13675 PF00773 RNB domain DAES_RS13675 PF00575 S1 RNA binding domain DAES_RS13680 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DAES_RS13685 PF01027 Inhibitor of apoptosis-promoting Bax1 DAES_RS13700 PF01699 Sodium/calcium exchanger protein DAES_RS13710 PF01814 Hemerythrin HHE cation binding domain DAES_RS13715 PF00154 recA bacterial DNA recombination protein DAES_RS13720 PF01411 tRNA synthetases class II (A) DAES_RS13720 PF02272 DHHA1 domain DAES_RS13720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DAES_RS13725 PF00572 Ribosomal protein L13 DAES_RS13730 PF00380 Ribosomal protein S9/S16 DAES_RS13745 PF01891 Cobalt uptake substrate-specific transmembrane region DAES_RS13755 PF02082 Transcriptional regulator DAES_RS13760 PF03006 Haemolysin-III related DAES_RS13770 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DAES_RS13780 PF10609 NUBPL iron-transfer P-loop NTPase DAES_RS13790 PF02954 Bacterial regulatory protein, Fis family DAES_RS13790 PF00072 Response regulator receiver domain DAES_RS13790 PF00158 Sigma-54 interaction domain DAES_RS13795 PF02492 CobW/HypB/UreG, nucleotide-binding domain DAES_RS13800 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DAES_RS13810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DAES_RS13820 PF00583 Acetyltransferase (GNAT) family DAES_RS13825 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS13825 PF12911 N-terminal TM domain of oligopeptide transport permease C DAES_RS13830 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS13840 PF01522 Polysaccharide deacetylase DAES_RS13865 PF02769 AIR synthase related protein, C-terminal domain DAES_RS13865 PF00586 AIR synthase related protein, N-terminal domain DAES_RS13870 PF01938 TRAM domain DAES_RS13870 PF05958 tRNA (Uracil-5-)-methyltransferase DAES_RS13895 PF00072 Response regulator receiver domain DAES_RS13900 PF00224 Pyruvate kinase, barrel domain DAES_RS13900 PF02887 Pyruvate kinase, alpha/beta domain DAES_RS13905 PF02381 MraZ protein, putative antitoxin-like DAES_RS13910 PF01795 MraW methylase family DAES_RS13920 PF03717 Penicillin-binding Protein dimerisation domain DAES_RS13920 PF00905 Penicillin binding protein transpeptidase domain DAES_RS13925 PF01225 Mur ligase family, catalytic domain DAES_RS13925 PF02875 Mur ligase family, glutamate ligase domain DAES_RS13925 PF08245 Mur ligase middle domain DAES_RS13930 PF01225 Mur ligase family, catalytic domain DAES_RS13930 PF02875 Mur ligase family, glutamate ligase domain DAES_RS13930 PF08245 Mur ligase middle domain DAES_RS13935 PF00953 Glycosyl transferase family 4 DAES_RS13935 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DAES_RS13940 PF08245 Mur ligase middle domain DAES_RS13945 PF01098 Cell cycle protein DAES_RS13950 PF03033 Glycosyltransferase family 28 N-terminal domain DAES_RS13950 PF04101 Glycosyltransferase family 28 C-terminal domain DAES_RS13955 PF08245 Mur ligase middle domain DAES_RS13955 PF01225 Mur ligase family, catalytic domain DAES_RS13955 PF02875 Mur ligase family, glutamate ligase domain DAES_RS13960 PF01565 FAD binding domain DAES_RS13960 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DAES_RS13965 PF03799 Cell division protein FtsQ DAES_RS13965 PF08478 POTRA domain, FtsQ-type DAES_RS13970 PF02491 SHS2 domain inserted in FTSA DAES_RS13975 PF12327 FtsZ family, C-terminal domain DAES_RS13975 PF00091 Tubulin/FtsZ family, GTPase domain DAES_RS13980 PF00919 Uncharacterized protein family UPF0004 DAES_RS13980 PF18693 TRAM domain DAES_RS13980 PF04055 Radical SAM superfamily DAES_RS13990 PF13276 HTH-like domain DAES_RS13990 PF13683 Integrase core domain DAES_RS13995 PF01527 Transposase DAES_RS14000 PF02371 Transposase IS116/IS110/IS902 family DAES_RS14000 PF01548 Transposase DAES_RS14005 PF00464 Serine hydroxymethyltransferase DAES_RS14010 PF00109 Beta-ketoacyl synthase, N-terminal domain DAES_RS14010 PF02801 Beta-ketoacyl synthase, C-terminal domain DAES_RS14015 PF00550 Phosphopantetheine attachment site DAES_RS14025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DAES_RS14025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DAES_RS14030 PF02504 Fatty acid synthesis protein DAES_RS14035 PF01783 Ribosomal L32p protein family DAES_RS14045 PF00830 Ribosomal L28 family DAES_RS14070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DAES_RS14070 PF00384 Molybdopterin oxidoreductase DAES_RS14070 PF01568 Molydopterin dinucleotide binding domain DAES_RS14075 PF13247 4Fe-4S dicluster domain DAES_RS14080 PF00749 tRNA synthetases class I (E and Q), catalytic domain DAES_RS14085 PF01106 NifU-like domain DAES_RS14090 PF00753 Metallo-beta-lactamase superfamily DAES_RS14095 PF00072 Response regulator receiver domain DAES_RS14095 PF02954 Bacterial regulatory protein, Fis family DAES_RS14095 PF00158 Sigma-54 interaction domain DAES_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS14100 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS14115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DAES_RS14115 PF01872 RibD C-terminal domain DAES_RS14130 PF00677 Lumazine binding domain DAES_RS14140 PF00925 GTP cyclohydrolase II DAES_RS14140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DAES_RS14145 PF00885 6,7-dimethyl-8-ribityllumazine synthase DAES_RS14150 PF01029 NusB family DAES_RS14155 PF09334 tRNA synthetases class I (M) DAES_RS14155 PF13603 Leucyl-tRNA synthetase, Domain 2 DAES_RS14155 PF08264 Anticodon-binding domain of tRNA DAES_RS14155 PF00133 tRNA synthetases class I (I, L, M and V) DAES_RS14190 PF04002 RadC-like JAB domain DAES_RS14195 PF00708 Acylphosphatase DAES_RS14200 PF02190 ATP-dependent protease La (LON) substrate-binding domain DAES_RS14200 PF05362 Lon protease (S16) C-terminal proteolytic domain DAES_RS14200 PF00004 ATPase family associated with various cellular activities (AAA) DAES_RS14230 PF03900 Porphobilinogen deaminase, C-terminal domain DAES_RS14230 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DAES_RS14240 PF02277 Phosphoribosyltransferase DAES_RS14265 PF01202 Shikimate kinase DAES_RS14270 PF00156 Phosphoribosyl transferase domain DAES_RS14290 PF00005 ABC transporter DAES_RS14295 PF13458 Periplasmic binding protein DAES_RS14305 PF02653 Branched-chain amino acid transport system / permease component DAES_RS14310 PF00501 AMP-binding enzyme DAES_RS14315 PF00005 ABC transporter DAES_RS14315 PF12399 Branched-chain amino acid ATP-binding cassette transporter DAES_RS14330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DAES_RS14335 PF00155 Aminotransferase class I and II DAES_RS14345 PF02463 RecF/RecN/SMC N terminal domain DAES_RS14350 PF00497 Bacterial extracellular solute-binding proteins, family 3 DAES_RS14375 PF01966 HD domain DAES_RS14375 PF00072 Response regulator receiver domain DAES_RS14405 PF00881 Nitroreductase family DAES_RS14410 PF00753 Metallo-beta-lactamase superfamily DAES_RS14425 PF00156 Phosphoribosyl transferase domain DAES_RS14430 PF00829 Ribosomal prokaryotic L21 protein DAES_RS14435 PF01016 Ribosomal L27 protein DAES_RS14440 PF01018 GTP1/OBG DAES_RS14440 PF01926 50S ribosome-binding GTPase DAES_RS14445 PF00696 Amino acid kinase family DAES_RS14445 PF01472 PUA domain DAES_RS14450 PF07690 Major Facilitator Superfamily DAES_RS14450 PF00083 Sugar (and other) transporter DAES_RS14460 PF00696 Amino acid kinase family DAES_RS14465 PF01814 Hemerythrin HHE cation binding domain DAES_RS14470 PF03453 MoeA N-terminal region (domain I and II) DAES_RS14470 PF00994 Probable molybdopterin binding domain DAES_RS14470 PF03454 MoeA C-terminal region (domain IV) DAES_RS14480 PF05221 S-adenosyl-L-homocysteine hydrolase DAES_RS14480 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DAES_RS14485 PF03551 Transcriptional regulator PadR-like family DAES_RS14485 PF13847 Methyltransferase domain DAES_RS14495 PF02954 Bacterial regulatory protein, Fis family DAES_RS14495 PF00072 Response regulator receiver domain DAES_RS14495 PF00158 Sigma-54 interaction domain DAES_RS14545 PF03480 Bacterial extracellular solute-binding protein, family 7 DAES_RS14550 PF03480 Bacterial extracellular solute-binding protein, family 7 DAES_RS14560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DAES_RS14565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DAES_RS14565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DAES_RS14580 PF13188 PAS domain DAES_RS14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS14580 PF00072 Response regulator receiver domain DAES_RS14580 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS14580 PF08448 PAS fold DAES_RS14600 PF00437 Type II/IV secretion system protein DAES_RS14615 PF04972 BON domain DAES_RS14615 PF00263 Bacterial type II and III secretion system protein DAES_RS14615 PF13629 Pilus formation protein N terminal region DAES_RS14635 PF00072 Response regulator receiver domain DAES_RS14635 PF02954 Bacterial regulatory protein, Fis family DAES_RS14635 PF00158 Sigma-54 interaction domain DAES_RS14660 PF00497 Bacterial extracellular solute-binding proteins, family 3 DAES_RS14670 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DAES_RS14670 PF00749 tRNA synthetases class I (E and Q), catalytic domain DAES_RS14675 PF02080 TrkA-C domain DAES_RS14680 PF00999 Sodium/hydrogen exchanger family DAES_RS14700 PF12762 ISXO2-like transposase domain DAES_RS14735 PF01189 16S rRNA methyltransferase RsmB/F DAES_RS14735 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DAES_RS14735 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DAES_RS14745 PF03480 Bacterial extracellular solute-binding protein, family 7 DAES_RS14755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DAES_RS14775 PF01479 S4 domain DAES_RS14775 PF00849 RNA pseudouridylate synthase DAES_RS14785 PF00877 NlpC/P60 family DAES_RS14790 PF00118 TCP-1/cpn60 chaperonin family DAES_RS14795 PF00166 Chaperonin 10 Kd subunit DAES_RS14800 PF00982 Glycosyltransferase family 20 DAES_RS14810 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS14810 PF03707 Bacterial signalling protein N terminal repeat DAES_RS14810 PF00563 EAL domain DAES_RS14820 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS14820 PF00072 Response regulator receiver domain DAES_RS14820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS14820 PF00672 HAMP domain DAES_RS14820 PF17149 Periplasmic sensor domain found in signal transduction proteins DAES_RS14820 PF01627 Hpt domain DAES_RS14830 PF12368 Rhodanase C-terminal DAES_RS14830 PF00581 Rhodanese-like domain DAES_RS14830 PF17773 UPF0176 acylphosphatase like domain DAES_RS14835 PF09084 NMT1/THI5 like DAES_RS14840 PF00672 HAMP domain DAES_RS14840 PF07228 Stage II sporulation protein E (SpoIIE) DAES_RS14865 PF06071 Protein of unknown function (DUF933) DAES_RS14865 PF01926 50S ribosome-binding GTPase DAES_RS14870 PF00440 Bacterial regulatory proteins, tetR family DAES_RS14870 PF13977 BetI-type transcriptional repressor, C-terminal DAES_RS14885 PF00672 HAMP domain DAES_RS14885 PF17200 Single Cache domain 2 DAES_RS14885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS14900 PF00072 Response regulator receiver domain DAES_RS14900 PF01584 CheW-like domain DAES_RS14905 PF03102 NeuB family DAES_RS14905 PF08666 SAF domain DAES_RS14915 PF00501 AMP-binding enzyme DAES_RS14915 PF13193 AMP-binding enzyme C-terminal domain DAES_RS14925 PF02653 Branched-chain amino acid transport system / permease component DAES_RS14935 PF12399 Branched-chain amino acid ATP-binding cassette transporter DAES_RS14935 PF00005 ABC transporter DAES_RS14940 PF00005 ABC transporter DAES_RS14945 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DAES_RS14955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DAES_RS14965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DAES_RS14965 PF07685 CobB/CobQ-like glutamine amidotransferase domain DAES_RS14970 PF08679 Dissimilatory sulfite reductase D (DsrD) DAES_RS14975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DAES_RS14975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DAES_RS14980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DAES_RS14980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DAES_RS14995 PF01725 Ham1 family DAES_RS15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS15000 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS15005 PF18693 TRAM domain DAES_RS15005 PF04055 Radical SAM superfamily DAES_RS15005 PF00919 Uncharacterized protein family UPF0004 DAES_RS15010 PF02371 Transposase IS116/IS110/IS902 family DAES_RS15010 PF01548 Transposase DAES_RS15015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DAES_RS15015 PF02403 Seryl-tRNA synthetase N-terminal domain DAES_RS15030 PF03949 Malic enzyme, NAD binding domain DAES_RS15030 PF00390 Malic enzyme, N-terminal domain DAES_RS15030 PF01515 Phosphate acetyl/butaryl transferase DAES_RS15045 PF16868 NMT1-like family DAES_RS15050 PF00588 SpoU rRNA Methylase family DAES_RS15055 PF11798 IMS family HHH motif DAES_RS15055 PF11799 impB/mucB/samB family C-terminal domain DAES_RS15055 PF00817 impB/mucB/samB family DAES_RS15075 PF01416 tRNA pseudouridine synthase DAES_RS15080 PF13536 Putative multidrug resistance efflux transporter DAES_RS15095 PF01894 Uncharacterised protein family UPF0047 DAES_RS15100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DAES_RS15110 PF05175 Methyltransferase small domain DAES_RS15115 PF00923 Transaldolase/Fructose-6-phosphate aldolase DAES_RS15120 PF03372 Endonuclease/Exonuclease/phosphatase family DAES_RS15130 PF02224 Cytidylate kinase DAES_RS15135 PF00155 Aminotransferase class I and II DAES_RS15140 PF00582 Universal stress protein family DAES_RS15150 PF00005 ABC transporter DAES_RS15155 PF02653 Branched-chain amino acid transport system / permease component DAES_RS15155 PF11862 Domain of unknown function (DUF3382) DAES_RS15160 PF02653 Branched-chain amino acid transport system / permease component DAES_RS15165 PF13458 Periplasmic binding protein DAES_RS15170 PF12399 Branched-chain amino acid ATP-binding cassette transporter DAES_RS15170 PF00005 ABC transporter DAES_RS15175 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DAES_RS15180 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS15185 PF00005 ABC transporter DAES_RS15185 PF00571 CBS domain DAES_RS15200 PF07992 Pyridine nucleotide-disulphide oxidoreductase DAES_RS15200 PF14759 Reductase C-terminal DAES_RS15210 PF00890 FAD binding domain DAES_RS15215 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit DAES_RS15215 PF13187 4Fe-4S dicluster domain DAES_RS15220 PF14306 PUA-like domain DAES_RS15220 PF01747 ATP-sulfurylase DAES_RS15235 PF00330 Aconitase family (aconitate hydratase) DAES_RS15240 PF09312 SurA N-terminal domain DAES_RS15260 PF13860 FlgD Ig-like domain DAES_RS15260 PF03963 Flagellar hook capping protein - N-terminal region DAES_RS15260 PF13861 FlgD Tudor-like domain DAES_RS15265 PF00460 Flagella basal body rod protein DAES_RS15265 PF07559 Flagellar basal body protein FlaE DAES_RS15265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DAES_RS15265 PF07196 Flagellin hook IN motif DAES_RS15270 PF00700 Bacterial flagellin C-terminal helical region DAES_RS15270 PF00669 Bacterial flagellin N-terminal helical region DAES_RS15275 PF14622 Ribonuclease-III-like DAES_RS15275 PF00035 Double-stranded RNA binding motif DAES_RS15285 PF07085 DRTGG domain DAES_RS15300 PF00958 GMP synthase C terminal domain DAES_RS15300 PF00117 Glutamine amidotransferase class-I DAES_RS15305 PF01343 Peptidase family S49 DAES_RS15310 PF00575 S1 RNA binding domain DAES_RS15315 PF01895 PhoU domain DAES_RS15320 PF00005 ABC transporter DAES_RS15340 PF03306 Alpha-acetolactate decarboxylase DAES_RS15345 PF03975 CheD chemotactic sensory transduction DAES_RS15355 PF04463 Protein of unknown function (DUF523) DAES_RS15385 PF17760 UvrA interaction domain DAES_RS15385 PF17755 UvrA DNA-binding domain DAES_RS15390 PF00486 Transcriptional regulatory protein, C terminal DAES_RS15390 PF00072 Response regulator receiver domain DAES_RS15400 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DAES_RS15410 PF01502 Phosphoribosyl-AMP cyclohydrolase DAES_RS15415 PF08029 HisG, C-terminal domain DAES_RS15415 PF01634 ATP phosphoribosyltransferase DAES_RS15420 PF01467 Cytidylyltransferase-like DAES_RS15420 PF00294 pfkB family carbohydrate kinase DAES_RS15430 PF02769 AIR synthase related protein, C-terminal domain DAES_RS15430 PF00586 AIR synthase related protein, N-terminal domain DAES_RS15445 PF03061 Thioesterase superfamily DAES_RS15450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DAES_RS15460 PF03749 Sugar fermentation stimulation protein RE domain DAES_RS15460 PF17746 SfsA N-terminal OB domain DAES_RS15485 PF00561 alpha/beta hydrolase fold DAES_RS15500 PF01040 UbiA prenyltransferase family DAES_RS15505 PF04657 Putative inner membrane exporter, YdcZ DAES_RS15510 PF01258 Prokaryotic dksA/traR C4-type zinc finger DAES_RS15515 PF00534 Glycosyl transferases group 1 DAES_RS15520 PF02371 Transposase IS116/IS110/IS902 family DAES_RS15520 PF01548 Transposase DAES_RS15525 PF02867 Ribonucleotide reductase, barrel domain DAES_RS15525 PF00317 Ribonucleotide reductase, all-alpha domain DAES_RS15525 PF03477 ATP cone domain DAES_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS15535 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS15535 PF00672 HAMP domain DAES_RS15540 PF01209 ubiE/COQ5 methyltransferase family DAES_RS15545 PF00155 Aminotransferase class I and II DAES_RS15550 PF00579 tRNA synthetases class I (W and Y) DAES_RS15550 PF01479 S4 domain DAES_RS15555 PF13277 YmdB-like protein DAES_RS15560 PF01739 CheR methyltransferase, SAM binding domain DAES_RS15560 PF03705 CheR methyltransferase, all-alpha domain DAES_RS15565 PF01966 HD domain DAES_RS15565 PF00013 KH domain DAES_RS15565 PF12072 Domain of unknown function (DUF3552) DAES_RS15575 PF00132 Bacterial transferase hexapeptide (six repeats) DAES_RS15575 PF12804 MobA-like NTP transferase domain DAES_RS15580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DAES_RS15580 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DAES_RS15585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DAES_RS15585 PF02874 ATP synthase alpha/beta family, beta-barrel domain DAES_RS15590 PF00231 ATP synthase DAES_RS15595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DAES_RS15595 PF00306 ATP synthase alpha/beta chain, C terminal domain DAES_RS15595 PF02874 ATP synthase alpha/beta family, beta-barrel domain DAES_RS15600 PF00213 ATP synthase delta (OSCP) subunit DAES_RS15605 PF00430 ATP synthase B/B' CF(0) DAES_RS15620 PF01098 Cell cycle protein DAES_RS15625 PF00905 Penicillin binding protein transpeptidase domain DAES_RS15625 PF03717 Penicillin-binding Protein dimerisation domain DAES_RS15650 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DAES_RS15650 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DAES_RS15655 PF02629 CoA binding domain DAES_RS15655 PF06971 Putative DNA-binding protein N-terminus DAES_RS15660 PF00137 ATP synthase subunit C DAES_RS15665 PF00119 ATP synthase A chain DAES_RS15675 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DAES_RS15685 PF00156 Phosphoribosyl transferase domain DAES_RS15695 PF00578 AhpC/TSA family DAES_RS15700 PF02574 Homocysteine S-methyltransferase DAES_RS15700 PF02310 B12 binding domain DAES_RS15700 PF02965 Vitamin B12 dependent methionine synthase, activation domain DAES_RS15700 PF00809 Pterin binding enzyme DAES_RS15700 PF02607 B12 binding domain DAES_RS15705 PF04542 Sigma-70 region 2 DAES_RS15705 PF00140 Sigma-70 factor, region 1.2 DAES_RS15705 PF04545 Sigma-70, region 4 DAES_RS15705 PF04539 Sigma-70 region 3 DAES_RS15725 PF02502 Ribose/Galactose Isomerase DAES_RS15730 PF02779 Transketolase, pyrimidine binding domain DAES_RS15730 PF00456 Transketolase, thiamine diphosphate binding domain DAES_RS15730 PF02780 Transketolase, C-terminal domain DAES_RS15735 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DAES_RS15765 PF01029 NusB family DAES_RS15765 PF01189 16S rRNA methyltransferase RsmB/F DAES_RS15770 PF00403 Heavy-metal-associated domain DAES_RS15785 PF00270 DEAD/DEAH box helicase DAES_RS15785 PF09369 Domain of unknown function (DUF1998) DAES_RS15785 PF00271 Helicase conserved C-terminal domain DAES_RS15790 PF00072 Response regulator receiver domain DAES_RS15810 PF00072 Response regulator receiver domain DAES_RS15810 PF02954 Bacterial regulatory protein, Fis family DAES_RS15810 PF00158 Sigma-54 interaction domain DAES_RS15815 PF01812 5-formyltetrahydrofolate cyclo-ligase family DAES_RS15825 PF00753 Metallo-beta-lactamase superfamily DAES_RS15825 PF14863 Alkyl sulfatase dimerisation DAES_RS15825 PF14864 Alkyl sulfatase C-terminal DAES_RS15830 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS15835 PF02310 B12 binding domain DAES_RS15835 PF04055 Radical SAM superfamily DAES_RS15845 PF00216 Bacterial DNA-binding protein DAES_RS15850 PF01230 HIT domain DAES_RS15855 PF02719 Polysaccharide biosynthesis protein DAES_RS15860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DAES_RS15870 PF00698 Acyl transferase domain DAES_RS15875 PF01488 Shikimate / quinate 5-dehydrogenase DAES_RS15875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DAES_RS15875 PF08501 Shikimate dehydrogenase substrate binding domain DAES_RS15880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DAES_RS15890 PF03975 CheD chemotactic sensory transduction DAES_RS15895 PF00664 ABC transporter transmembrane region DAES_RS15895 PF00005 ABC transporter DAES_RS15905 PF01520 N-acetylmuramoyl-L-alanine amidase DAES_RS15910 PF02219 Methylenetetrahydrofolate reductase DAES_RS15925 PF01568 Molydopterin dinucleotide binding domain DAES_RS15925 PF00384 Molybdopterin oxidoreductase DAES_RS15925 PF10518 TAT (twin-arginine translocation) pathway signal sequence DAES_RS15925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DAES_RS15930 PF12800 4Fe-4S binding domain DAES_RS15930 PF13247 4Fe-4S dicluster domain DAES_RS15960 PF02583 Metal-sensitive transcriptional repressor DAES_RS15965 PF07650 KH domain DAES_RS15965 PF01926 50S ribosome-binding GTPase DAES_RS15975 PF00082 Subtilase family DAES_RS15975 PF13860 FlgD Ig-like domain DAES_RS15975 PF05922 Peptidase inhibitor I9 DAES_RS15975 PF02225 PA domain DAES_RS15980 PF01136 Peptidase family U32 DAES_RS15980 PF16325 Peptidase family U32 C-terminal domain DAES_RS15985 PF00011 Hsp20/alpha crystallin family DAES_RS15990 PF00011 Hsp20/alpha crystallin family DAES_RS15995 PF03966 Trm112p-like protein DAES_RS16000 PF02811 PHP domain DAES_RS16005 PF12627 Probable RNA and SrmB- binding site of polymerase A DAES_RS16005 PF01743 Poly A polymerase head domain DAES_RS16005 PF01966 HD domain DAES_RS16010 PF01979 Amidohydrolase family DAES_RS16015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DAES_RS16015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DAES_RS16020 PF01979 Amidohydrolase family DAES_RS16030 PF00403 Heavy-metal-associated domain DAES_RS16035 PF00072 Response regulator receiver domain DAES_RS16035 PF00196 Bacterial regulatory proteins, luxR family DAES_RS16050 PF00571 CBS domain DAES_RS16055 PF00072 Response regulator receiver domain DAES_RS16055 PF00486 Transcriptional regulatory protein, C terminal DAES_RS16060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DAES_RS16060 PF01627 Hpt domain DAES_RS16060 PF00072 Response regulator receiver domain DAES_RS16060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16060 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS16060 PF00672 HAMP domain DAES_RS16065 PF12762 ISXO2-like transposase domain DAES_RS16100 PF02371 Transposase IS116/IS110/IS902 family DAES_RS16100 PF01548 Transposase DAES_RS16105 PF00501 AMP-binding enzyme DAES_RS16105 PF14535 AMP-binding enzyme C-terminal domain DAES_RS16135 PF01527 Transposase DAES_RS16150 PF12762 ISXO2-like transposase domain DAES_RS16160 PF00989 PAS fold DAES_RS16160 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16170 PF13581 Histidine kinase-like ATPase domain DAES_RS16205 PF00005 ABC transporter DAES_RS16210 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS16215 PF00528 Binding-protein-dependent transport system inner membrane component DAES_RS16225 PF00501 AMP-binding enzyme DAES_RS16225 PF13193 AMP-binding enzyme C-terminal domain DAES_RS16265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DAES_RS16265 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DAES_RS16270 PF00111 2Fe-2S iron-sulfur cluster binding domain DAES_RS16270 PF01799 [2Fe-2S] binding domain DAES_RS16275 PF03450 CO dehydrogenase flavoprotein C-terminal domain DAES_RS16275 PF00941 FAD binding domain in molybdopterin dehydrogenase DAES_RS16280 PF01554 MatE DAES_RS16310 PF02335 Cytochrome c552 DAES_RS16315 PF14522 Cytochrome c7 and related cytochrome c DAES_RS16315 PF03264 NapC/NirT cytochrome c family, N-terminal region DAES_RS16320 PF00440 Bacterial regulatory proteins, tetR family DAES_RS16330 PF00873 AcrB/AcrD/AcrF family DAES_RS16335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DAES_RS16340 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DAES_RS16340 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DAES_RS16340 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DAES_RS16340 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DAES_RS16340 PF07703 Alpha-2-macroglobulin bait region domain DAES_RS16340 PF00207 Alpha-2-macroglobulin family DAES_RS16340 PF17962 Bacterial macroglobulin domain 6 DAES_RS16340 PF01835 MG2 domain DAES_RS16340 PF07678 A-macroglobulin TED domain DAES_RS16345 PF00905 Penicillin binding protein transpeptidase domain DAES_RS16345 PF00912 Transglycosylase DAES_RS16345 PF06832 Penicillin-Binding Protein C-terminus Family DAES_RS16350 PF00990 Diguanylate cyclase, GGDEF domain DAES_RS16355 PF13439 Glycosyltransferase Family 4 DAES_RS16355 PF00534 Glycosyl transferases group 1 DAES_RS16375 PF00664 ABC transporter transmembrane region DAES_RS16375 PF00005 ABC transporter DAES_RS16380 PF08484 C-methyltransferase C-terminal domain DAES_RS16380 PF08421 Putative zinc binding domain DAES_RS16385 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DAES_RS16390 PF16363 GDP-mannose 4,6 dehydratase DAES_RS16395 PF00483 Nucleotidyl transferase DAES_RS16410 PF01370 NAD dependent epimerase/dehydratase family DAES_RS16420 PF01609 Transposase DDE domain DAES_RS16420 PF13808 DDE_Tnp_1-associated DAES_RS16425 PF02540 NAD synthase DAES_RS16425 PF00795 Carbon-nitrogen hydrolase DAES_RS16440 PF01494 FAD binding domain DAES_RS16445 PF00578 AhpC/TSA family DAES_RS16450 PF08367 Peptidase M16C associated DAES_RS16450 PF00675 Insulinase (Peptidase family M16) DAES_RS16450 PF05193 Peptidase M16 inactive domain DAES_RS16455 PF00120 Glutamine synthetase, catalytic domain DAES_RS16455 PF03951 Glutamine synthetase, beta-Grasp domain DAES_RS16460 PF00582 Universal stress protein family DAES_RS16465 PF02397 Bacterial sugar transferase DAES_RS16480 PF00672 HAMP domain DAES_RS16480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS16480 PF02743 Cache domain DAES_RS16485 PF12795 Mechanosensitive ion channel porin domain DAES_RS16485 PF00924 Mechanosensitive ion channel DAES_RS16485 PF12794 Mechanosensitive ion channel inner membrane domain 1 DAES_RS16490 PF13419 Haloacid dehalogenase-like hydrolase DAES_RS16495 PF01261 Xylose isomerase-like TIM barrel DAES_RS16505 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DAES_RS16510 PF01810 LysE type translocator DAES_RS16515 PF12762 ISXO2-like transposase domain DAES_RS16520 PF13847 Methyltransferase domain DAES_RS16525 PF01078 Magnesium chelatase, subunit ChlI DAES_RS16525 PF13335 Magnesium chelatase, subunit ChlI C-terminal DAES_RS16545 PF03466 LysR substrate binding domain DAES_RS16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DAES_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DAES_RS16555 PF03466 LysR substrate binding domain DAES_RS16565 PF00733 Asparagine synthase DAES_RS16565 PF13537 Glutamine amidotransferase domain DAES_RS16585 PF00155 Aminotransferase class I and II DAES_RS16590 PF00300 Histidine phosphatase superfamily (branch 1) DAES_RS16595 PF00534 Glycosyl transferases group 1 DAES_RS16595 PF13439 Glycosyltransferase Family 4 DAES_RS16610 PF00521 DNA gyrase/topoisomerase IV, subunit A DAES_RS16610 PF03989 DNA gyrase C-terminal domain, beta-propeller DAES_RS16615 PF00204 DNA gyrase B DAES_RS16615 PF00986 DNA gyrase B subunit, carboxyl terminus DAES_RS16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16615 PF01751 Toprim domain DAES_RS16625 PF00308 Bacterial dnaA protein DAES_RS16625 PF11638 DnaA N-terminal domain DAES_RS16625 PF08299 Bacterial dnaA protein helix-turn-helix DAES_RS16635 PF01063 Amino-transferase class IV DAES_RS16640 PF00425 chorismate binding enzyme DAES_RS16640 PF04715 Anthranilate synthase component I, N terminal region DAES_RS16645 PF00117 Glutamine amidotransferase class-I DAES_RS16650 PF00731 AIR carboxylase DAES_RS16655 PF02843 Phosphoribosylglycinamide synthetase, C domain DAES_RS16655 PF02844 Phosphoribosylglycinamide synthetase, N domain DAES_RS16655 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DAES_RS16675 PF12762 ISXO2-like transposase domain DAES_RS16680 PF01527 Transposase DAES_RS16685 PF13683 Integrase core domain DAES_RS16685 PF13276 HTH-like domain DAES_RS16700 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DAES_RS16700 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DAES_RS16700 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DAES_RS16710 PF02547 Queuosine biosynthesis protein DAES_RS16725 PF02441 Flavoprotein DAES_RS16725 PF04127 DNA / pantothenate metabolism flavoprotein DAES_RS16740 PF01145 SPFH domain / Band 7 family DAES_RS16745 PF01370 NAD dependent epimerase/dehydratase family DAES_RS16760 PF00072 Response regulator receiver domain DAES_RS16760 PF01627 Hpt domain DAES_RS16760 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16760 PF00672 HAMP domain DAES_RS16760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DAES_RS16770 PF00535 Glycosyl transferase family 2 DAES_RS16775 PF02348 Cytidylyltransferase DAES_RS16780 PF00535 Glycosyl transferase family 2 DAES_RS16835 PF01965 DJ-1/PfpI family DAES_RS16835 PF12833 Helix-turn-helix domain DAES_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16845 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS16845 PF09308 LuxQ, periplasmic DAES_RS16845 PF00072 Response regulator receiver domain DAES_RS16860 PF07228 Stage II sporulation protein E (SpoIIE) DAES_RS16860 PF00672 HAMP domain DAES_RS16865 PF13426 PAS domain DAES_RS16865 PF00072 Response regulator receiver domain DAES_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16870 PF08241 Methyltransferase domain DAES_RS16875 PF08241 Methyltransferase domain DAES_RS16880 PF00005 ABC transporter DAES_RS16880 PF00664 ABC transporter transmembrane region DAES_RS16905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16905 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS16905 PF09308 LuxQ, periplasmic DAES_RS16905 PF00072 Response regulator receiver domain DAES_RS16910 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS16910 PF08448 PAS fold DAES_RS16910 PF13188 PAS domain DAES_RS16910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16910 PF00072 Response regulator receiver domain DAES_RS16945 PF00563 EAL domain DAES_RS16945 PF08668 HDOD domain DAES_RS16965 PF00072 Response regulator receiver domain DAES_RS16965 PF00497 Bacterial extracellular solute-binding proteins, family 3 DAES_RS16965 PF01627 Hpt domain DAES_RS16965 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS16980 PF00672 HAMP domain DAES_RS16980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DAES_RS16980 PF02743 Cache domain DAES_RS16995 PF10502 Signal peptidase, peptidase S26 DAES_RS17000 PF00902 Sec-independent protein translocase protein (TatC) DAES_RS17005 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS17005 PF00989 PAS fold DAES_RS17005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS17025 PF00072 Response regulator receiver domain DAES_RS17025 PF01627 Hpt domain DAES_RS17025 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS17025 PF00672 HAMP domain DAES_RS17025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DAES_RS17025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS17035 PF13188 PAS domain DAES_RS17035 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS17035 PF00072 Response regulator receiver domain DAES_RS17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS17035 PF08448 PAS fold DAES_RS17040 PF13581 Histidine kinase-like ATPase domain DAES_RS17040 PF07568 Histidine kinase DAES_RS17040 PF13426 PAS domain DAES_RS17045 PF00672 HAMP domain DAES_RS17045 PF01627 Hpt domain DAES_RS17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS17045 PF17149 Periplasmic sensor domain found in signal transduction proteins DAES_RS17045 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS17045 PF00072 Response regulator receiver domain DAES_RS17070 PF18698 Histidine kinase sensor domain DAES_RS17070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS17070 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS17070 PF00989 PAS fold DAES_RS17070 PF00672 HAMP domain DAES_RS17085 PF09308 LuxQ, periplasmic DAES_RS17085 PF00072 Response regulator receiver domain DAES_RS17085 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS17105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS17105 PF05384 Sensor protein DegS DAES_RS17105 PF07730 Histidine kinase DAES_RS17115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAES_RS17115 PF00512 His Kinase A (phospho-acceptor) domain DAES_RS17115 PF00989 PAS fold