locus-tag class description DMR_RS00005 PF00308 Bacterial dnaA protein DMR_RS00005 PF11638 DnaA N-terminal domain DMR_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DMR_RS00015 PF00204 DNA gyrase B DMR_RS00015 PF18053 DNA gyrase B subunit insert domain DMR_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS00015 PF01751 Toprim domain DMR_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus DMR_RS00020 PF00521 DNA gyrase/topoisomerase IV, subunit A DMR_RS00020 PF03989 DNA gyrase C-terminal domain, beta-propeller DMR_RS00035 PF04127 DNA / pantothenate metabolism flavoprotein DMR_RS00035 PF02441 Flavoprotein DMR_RS00050 PF16200 C-terminal region of band_7 DMR_RS00050 PF01145 SPFH domain / Band 7 family DMR_RS00055 PF01370 NAD dependent epimerase/dehydratase family DMR_RS00065 PF13614 AAA domain DMR_RS00075 PF17762 HTH domain found in ParB protein DMR_RS00075 PF02195 ParB-like nuclease domain DMR_RS00080 PF01467 Cytidylyltransferase-like DMR_RS00080 PF00294 pfkB family carbohydrate kinase DMR_RS00085 PF01740 STAS domain DMR_RS00090 PF02405 Permease MlaE DMR_RS00095 PF00005 ABC transporter DMR_RS00125 PF00920 Dehydratase family DMR_RS00130 PF08241 Methyltransferase domain DMR_RS00135 PF13393 Histidyl-tRNA synthetase DMR_RS00135 PF03129 Anticodon binding domain DMR_RS00140 PF00152 tRNA synthetases class II (D, K and N) DMR_RS00140 PF02938 GAD domain DMR_RS00140 PF01336 OB-fold nucleic acid binding domain DMR_RS00145 PF01327 Polypeptide deformylase DMR_RS00150 PF02911 Formyl transferase, C-terminal domain DMR_RS00150 PF00551 Formyl transferase DMR_RS00160 PF01189 16S rRNA methyltransferase RsmB/F DMR_RS00160 PF01029 NusB family DMR_RS00165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMR_RS00170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS00170 PF00672 HAMP domain DMR_RS00170 PF02743 Cache domain DMR_RS00175 PF00893 Small Multidrug Resistance protein DMR_RS00200 PF10415 Fumarase C C-terminus DMR_RS00200 PF00206 Lyase DMR_RS00205 PF02954 Bacterial regulatory protein, Fis family DMR_RS00205 PF00158 Sigma-54 interaction domain DMR_RS00205 PF13188 PAS domain DMR_RS00215 PF00343 Carbohydrate phosphorylase DMR_RS00220 PF05231 MASE1 DMR_RS00220 PF08447 PAS fold DMR_RS00220 PF08448 PAS fold DMR_RS00220 PF13426 PAS domain DMR_RS00220 PF00563 EAL domain DMR_RS00220 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS00250 PF00158 Sigma-54 interaction domain DMR_RS00250 PF02954 Bacterial regulatory protein, Fis family DMR_RS00250 PF00072 Response regulator receiver domain DMR_RS00255 PF00459 Inositol monophosphatase family DMR_RS00265 PF04371 Porphyromonas-type peptidyl-arginine deiminase DMR_RS00275 PF13537 Glutamine amidotransferase domain DMR_RS00275 PF00733 Asparagine synthase DMR_RS00280 PF13439 Glycosyltransferase Family 4 DMR_RS00280 PF00534 Glycosyl transferases group 1 DMR_RS00285 PF00072 Response regulator receiver domain DMR_RS00285 PF01584 CheW-like domain DMR_RS00300 PF00484 Carbonic anhydrase DMR_RS00320 PF08029 HisG, C-terminal domain DMR_RS00320 PF01634 ATP phosphoribosyltransferase DMR_RS00325 PF01502 Phosphoribosyl-AMP cyclohydrolase DMR_RS00340 PF04055 Radical SAM superfamily DMR_RS00350 PF01966 HD domain DMR_RS00350 PF01743 Poly A polymerase head domain DMR_RS00350 PF12627 Probable RNA and SrmB- binding site of polymerase A DMR_RS00355 PF01979 Amidohydrolase family DMR_RS00360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DMR_RS00360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DMR_RS00365 PF06180 Cobalt chelatase (CbiK) DMR_RS00370 PF02687 FtsX-like permease family DMR_RS00370 PF18075 FtsX extracellular domain DMR_RS00375 PF00005 ABC transporter DMR_RS00380 PF02463 RecF/RecN/SMC N terminal domain DMR_RS00385 PF12911 N-terminal TM domain of oligopeptide transport permease C DMR_RS00385 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS00390 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS00460 PF00589 Phage integrase family DMR_RS00470 PF02371 Transposase IS116/IS110/IS902 family DMR_RS00470 PF01548 Transposase DMR_RS00510 PF12833 Helix-turn-helix domain DMR_RS00510 PF06719 AraC-type transcriptional regulator N-terminus DMR_RS00515 PF00465 Iron-containing alcohol dehydrogenase DMR_RS00520 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DMR_RS00525 PF07690 Major Facilitator Superfamily DMR_RS00595 PF00486 Transcriptional regulatory protein, C terminal DMR_RS00595 PF00072 Response regulator receiver domain DMR_RS00605 PF07993 Male sterility protein DMR_RS00605 PF00550 Phosphopantetheine attachment site DMR_RS00605 PF00668 Condensation domain DMR_RS00605 PF13193 AMP-binding enzyme C-terminal domain DMR_RS00605 PF00501 AMP-binding enzyme DMR_RS00655 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DMR_RS00670 PF02386 Cation transport protein DMR_RS00675 PF02254 TrkA-N domain DMR_RS00675 PF02080 TrkA-C domain DMR_RS00680 PF01018 GTP1/OBG DMR_RS00680 PF01926 50S ribosome-binding GTPase DMR_RS00685 PF17785 PUA-like domain DMR_RS00685 PF10672 S-adenosylmethionine-dependent methyltransferase DMR_RS00690 PF13458 Periplasmic binding protein DMR_RS00695 PF12282 Signal transduction histidine kinase DMR_RS00695 PF07568 Histidine kinase DMR_RS00695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS00700 PF10396 GTP-binding protein TrmE N-terminus DMR_RS00700 PF01926 50S ribosome-binding GTPase DMR_RS00700 PF12631 MnmE helical domain DMR_RS00705 PF04055 Radical SAM superfamily DMR_RS00705 PF06968 Biotin and Thiamin Synthesis associated domain DMR_RS00720 PF13091 PLD-like domain DMR_RS00720 PF13396 Phospholipase_D-nuclease N-terminal DMR_RS00740 PF01451 Low molecular weight phosphotyrosine protein phosphatase DMR_RS00745 PF01451 Low molecular weight phosphotyrosine protein phosphatase DMR_RS00750 PF00465 Iron-containing alcohol dehydrogenase DMR_RS00760 PF02754 Cysteine-rich domain DMR_RS00765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMR_RS00765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS00785 PF00175 Oxidoreductase NAD-binding domain DMR_RS00785 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DMR_RS00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS00800 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS00800 PF00989 PAS fold DMR_RS00805 PF00158 Sigma-54 interaction domain DMR_RS00805 PF00072 Response regulator receiver domain DMR_RS00805 PF02954 Bacterial regulatory protein, Fis family DMR_RS00815 PF02254 TrkA-N domain DMR_RS00815 PF07885 Ion channel DMR_RS00820 PF00027 Cyclic nucleotide-binding domain DMR_RS00820 PF13545 Crp-like helix-turn-helix domain DMR_RS00830 PF10458 Valyl tRNA synthetase tRNA binding arm DMR_RS00830 PF08264 Anticodon-binding domain of tRNA DMR_RS00830 PF00133 tRNA synthetases class I (I, L, M and V) DMR_RS00840 PF00563 EAL domain DMR_RS00840 PF03707 Bacterial signalling protein N terminal repeat DMR_RS00840 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS00850 PF00571 CBS domain DMR_RS00855 PF00563 EAL domain DMR_RS00855 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS00855 PF03707 Bacterial signalling protein N terminal repeat DMR_RS00860 PF03358 NADPH-dependent FMN reductase DMR_RS00865 PF03412 Peptidase C39 family DMR_RS00865 PF00664 ABC transporter transmembrane region DMR_RS00865 PF00005 ABC transporter DMR_RS00870 PF01134 Glucose inhibited division protein A DMR_RS00880 PF01266 FAD dependent oxidoreductase DMR_RS00890 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DMR_RS00890 PF01565 FAD binding domain DMR_RS00905 PF01177 Asp/Glu/Hydantoin racemase DMR_RS00915 PF00202 Aminotransferase class-III DMR_RS00935 PF05036 Sporulation related domain DMR_RS00935 PF03330 Lytic transglycolase DMR_RS00940 PF00216 Bacterial DNA-binding protein DMR_RS00945 PF01230 HIT domain DMR_RS00960 PF01979 Amidohydrolase family DMR_RS00965 PF08668 HDOD domain DMR_RS00965 PF00563 EAL domain DMR_RS00970 PF02082 Transcriptional regulator DMR_RS00980 PF00857 Isochorismatase family DMR_RS00995 PF00465 Iron-containing alcohol dehydrogenase DMR_RS01000 PF00989 PAS fold DMR_RS01000 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01005 PF00072 Response regulator receiver domain DMR_RS01005 PF02954 Bacterial regulatory protein, Fis family DMR_RS01005 PF00158 Sigma-54 interaction domain DMR_RS01010 PF01590 GAF domain DMR_RS01010 PF00563 EAL domain DMR_RS01010 PF00360 Phytochrome region DMR_RS01010 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS01020 PF00672 HAMP domain DMR_RS01020 PF13426 PAS domain DMR_RS01025 PF00535 Glycosyl transferase family 2 DMR_RS01040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DMR_RS01040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DMR_RS01040 PF00037 4Fe-4S binding domain DMR_RS01045 PF02906 Iron only hydrogenase large subunit, C-terminal domain DMR_RS01045 PF00037 4Fe-4S binding domain DMR_RS01045 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DMR_RS01045 PF02256 Iron hydrogenase small subunit DMR_RS01050 PF10415 Fumarase C C-terminus DMR_RS01050 PF00206 Lyase DMR_RS01055 PF00768 D-alanyl-D-alanine carboxypeptidase DMR_RS01055 PF07943 Penicillin-binding protein 5, C-terminal domain DMR_RS01060 PF00672 HAMP domain DMR_RS01060 PF00989 PAS fold DMR_RS01060 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS01060 PF18698 Histidine kinase sensor domain DMR_RS01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01075 PF11760 Cobalamin synthesis G N-terminal DMR_RS01075 PF01890 Cobalamin synthesis G C-terminus DMR_RS01075 PF11761 Cobalamin biosynthesis central region DMR_RS01080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMR_RS01085 PF02085 Class III cytochrome C family DMR_RS01115 PF00005 ABC transporter DMR_RS01120 PF16736 Single Cache-like DMR_RS01120 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01120 PF00989 PAS fold DMR_RS01125 PF00072 Response regulator receiver domain DMR_RS01125 PF00486 Transcriptional regulatory protein, C terminal DMR_RS01135 PF00989 PAS fold DMR_RS01135 PF18698 Histidine kinase sensor domain DMR_RS01135 PF00672 HAMP domain DMR_RS01135 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DMR_RS01145 PF07685 CobB/CobQ-like glutamine amidotransferase domain DMR_RS01160 PF00118 TCP-1/cpn60 chaperonin family DMR_RS01165 PF00166 Chaperonin 10 Kd subunit DMR_RS01170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DMR_RS01170 PF00361 Proton-conducting membrane transporter DMR_RS01170 PF13244 Domain of unknown function (DUF4040) DMR_RS01175 PF00146 NADH dehydrogenase DMR_RS01180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMR_RS01190 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DMR_RS01190 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMR_RS01190 PF00374 Nickel-dependent hydrogenase DMR_RS01205 PF09115 DNA polymerase III, delta subunit, C terminal DMR_RS01215 PF01747 ATP-sulfurylase DMR_RS01215 PF14306 PUA-like domain DMR_RS01225 PF03975 CheD chemotactic sensory transduction DMR_RS01230 PF00072 Response regulator receiver domain DMR_RS01235 PF01584 CheW-like domain DMR_RS01235 PF02895 Signal transducing histidine kinase, homodimeric domain DMR_RS01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01235 PF01627 Hpt domain DMR_RS01260 PF02563 Polysaccharide biosynthesis/export protein DMR_RS01260 PF10531 SLBB domain DMR_RS01260 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DMR_RS01275 PF01593 Flavin containing amine oxidoreductase DMR_RS01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01290 PF08447 PAS fold DMR_RS01290 PF08448 PAS fold DMR_RS01295 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01295 PF00072 Response regulator receiver domain DMR_RS01295 PF01627 Hpt domain DMR_RS01305 PF04055 Radical SAM superfamily DMR_RS01305 PF01938 TRAM domain DMR_RS01305 PF00919 Uncharacterized protein family UPF0004 DMR_RS01315 PF03279 Bacterial lipid A biosynthesis acyltransferase DMR_RS01330 PF04015 Domain of unknown function (DUF362) DMR_RS01335 PF13193 AMP-binding enzyme C-terminal domain DMR_RS01335 PF16177 Acetyl-coenzyme A synthetase N-terminus DMR_RS01335 PF00501 AMP-binding enzyme DMR_RS01350 PF00664 ABC transporter transmembrane region DMR_RS01350 PF00005 ABC transporter DMR_RS01350 PF03412 Peptidase C39 family DMR_RS01355 PF00534 Glycosyl transferases group 1 DMR_RS01355 PF13439 Glycosyltransferase Family 4 DMR_RS01375 PF04055 Radical SAM superfamily DMR_RS01375 PF06463 Molybdenum Cofactor Synthesis C DMR_RS01380 PF02653 Branched-chain amino acid transport system / permease component DMR_RS01390 PF00005 ABC transporter DMR_RS01395 PF02608 ABC transporter substrate-binding protein PnrA-like DMR_RS01415 PF00534 Glycosyl transferases group 1 DMR_RS01415 PF13439 Glycosyltransferase Family 4 DMR_RS01425 PF00709 Adenylosuccinate synthetase DMR_RS01435 PF02142 MGS-like domain DMR_RS01435 PF01808 AICARFT/IMPCHase bienzyme DMR_RS01440 PF00773 RNB domain DMR_RS01440 PF00575 S1 RNA binding domain DMR_RS01440 PF08206 Ribonuclease B OB domain DMR_RS01445 PF02660 Glycerol-3-phosphate acyltransferase DMR_RS01490 PF00534 Glycosyl transferases group 1 DMR_RS01495 PF00534 Glycosyl transferases group 1 DMR_RS01495 PF13439 Glycosyltransferase Family 4 DMR_RS01545 PF00072 Response regulator receiver domain DMR_RS01545 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS01545 PF00672 HAMP domain DMR_RS01545 PF01627 Hpt domain DMR_RS01545 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01555 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS01560 PF00005 ABC transporter DMR_RS01560 PF16326 ABC transporter C-terminal domain DMR_RS01570 PF00258 Flavodoxin DMR_RS01620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DMR_RS01620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DMR_RS01625 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DMR_RS01625 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DMR_RS01630 PF08679 Dissimilatory sulfite reductase D (DsrD) DMR_RS01635 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DMR_RS01635 PF07685 CobB/CobQ-like glutamine amidotransferase domain DMR_RS01650 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DMR_RS01650 PF00476 DNA polymerase family A DMR_RS01650 PF09281 Taq polymerase, exonuclease DMR_RS01650 PF01367 5'-3' exonuclease, C-terminal SAM fold DMR_RS01665 PF13247 4Fe-4S dicluster domain DMR_RS01695 PF07969 Amidohydrolase family DMR_RS01700 PF02464 Competence-damaged protein DMR_RS01705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMR_RS01705 PF02403 Seryl-tRNA synthetase N-terminal domain DMR_RS01715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMR_RS01720 PF01678 Diaminopimelate epimerase DMR_RS01725 PF00425 chorismate binding enzyme DMR_RS01725 PF00117 Glutamine amidotransferase class-I DMR_RS01725 PF04715 Anthranilate synthase component I, N terminal region DMR_RS01730 PF00691 OmpA family DMR_RS01730 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMR_RS01750 PF00814 Glycoprotease family DMR_RS01755 PF17820 PDZ domain DMR_RS01755 PF02163 Peptidase family M50 DMR_RS01760 PF13288 DXP reductoisomerase C-terminal domain DMR_RS01760 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DMR_RS01760 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DMR_RS01780 PF00072 Response regulator receiver domain DMR_RS01780 PF13188 PAS domain DMR_RS01780 PF08448 PAS fold DMR_RS01780 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS01780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01785 PF00196 Bacterial regulatory proteins, luxR family DMR_RS01785 PF00072 Response regulator receiver domain DMR_RS01815 PF02561 Flagellar protein FliS DMR_RS01820 PF07195 Flagellar hook-associated protein 2 C-terminus DMR_RS01820 PF02465 Flagellar hook-associated protein 2 N-terminus DMR_RS01825 PF00700 Bacterial flagellin C-terminal helical region DMR_RS01825 PF00669 Bacterial flagellin N-terminal helical region DMR_RS01845 PF00072 Response regulator receiver domain DMR_RS01845 PF00196 Bacterial regulatory proteins, luxR family DMR_RS01850 PF00072 Response regulator receiver domain DMR_RS01850 PF08448 PAS fold DMR_RS01850 PF13188 PAS domain DMR_RS01850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS01850 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS01865 PF00072 Response regulator receiver domain DMR_RS01865 PF02954 Bacterial regulatory protein, Fis family DMR_RS01865 PF00158 Sigma-54 interaction domain DMR_RS01980 PF18389 TrmO C-terminal domain DMR_RS01980 PF01980 tRNA-methyltransferase O DMR_RS01990 PF00672 HAMP domain DMR_RS01990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS01990 PF17200 Single Cache domain 2 DMR_RS01995 PF00072 Response regulator receiver domain DMR_RS02000 PF00873 AcrB/AcrD/AcrF family DMR_RS02005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMR_RS02005 PF00529 HlyD membrane-fusion protein of T1SS DMR_RS02015 PF01475 Ferric uptake regulator family DMR_RS02020 PF00817 impB/mucB/samB family DMR_RS02020 PF11798 IMS family HHH motif DMR_RS02020 PF11799 impB/mucB/samB family C-terminal domain DMR_RS02030 PF00343 Carbohydrate phosphorylase DMR_RS02035 PF04055 Radical SAM superfamily DMR_RS02035 PF13186 Iron-sulfur cluster-binding domain DMR_RS02060 PF00490 Delta-aminolevulinic acid dehydratase DMR_RS02070 PF13186 Iron-sulfur cluster-binding domain DMR_RS02070 PF04055 Radical SAM superfamily DMR_RS02085 PF00005 ABC transporter DMR_RS02095 PF01757 Acyltransferase family DMR_RS02110 PF13603 Leucyl-tRNA synthetase, Domain 2 DMR_RS02110 PF00133 tRNA synthetases class I (I, L, M and V) DMR_RS02110 PF08264 Anticodon-binding domain of tRNA DMR_RS02125 PF01029 NusB family DMR_RS02130 PF00885 6,7-dimethyl-8-ribityllumazine synthase DMR_RS02135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DMR_RS02135 PF00925 GTP cyclohydrolase II DMR_RS02155 PF00677 Lumazine binding domain DMR_RS02160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DMR_RS02160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DMR_RS02165 PF00905 Penicillin binding protein transpeptidase domain DMR_RS02175 PF04055 Radical SAM superfamily DMR_RS02175 PF06969 HemN C-terminal domain DMR_RS02195 PF03717 Penicillin-binding Protein dimerisation domain DMR_RS02195 PF00905 Penicillin binding protein transpeptidase domain DMR_RS02200 PF01098 Cell cycle protein DMR_RS02215 PF00430 ATP synthase B/B' CF(0) DMR_RS02220 PF00213 ATP synthase delta (OSCP) subunit DMR_RS02225 PF00306 ATP synthase alpha/beta chain, C terminal domain DMR_RS02225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMR_RS02225 PF02874 ATP synthase alpha/beta family, beta-barrel domain DMR_RS02230 PF00231 ATP synthase DMR_RS02235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMR_RS02235 PF02874 ATP synthase alpha/beta family, beta-barrel domain DMR_RS02240 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DMR_RS02240 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DMR_RS02245 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DMR_RS02245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DMR_RS02250 PF12804 MobA-like NTP transferase domain DMR_RS02250 PF14602 Hexapeptide repeat of succinyl-transferase DMR_RS02250 PF00132 Bacterial transferase hexapeptide (six repeats) DMR_RS02265 PF12072 Domain of unknown function (DUF3552) DMR_RS02265 PF00013 KH domain DMR_RS02265 PF01966 HD domain DMR_RS02270 PF00226 DnaJ domain DMR_RS02270 PF01556 DnaJ C terminal domain DMR_RS02270 PF00684 DnaJ central domain DMR_RS02275 PF13277 YmdB-like protein DMR_RS02290 PF01479 S4 domain DMR_RS02290 PF00579 tRNA synthetases class I (W and Y) DMR_RS02300 PF00953 Glycosyl transferase family 4 DMR_RS02305 PF13439 Glycosyltransferase Family 4 DMR_RS02320 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS02320 PF00072 Response regulator receiver domain DMR_RS02325 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS02325 PF00072 Response regulator receiver domain DMR_RS02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS02325 PF13188 PAS domain DMR_RS02325 PF08448 PAS fold DMR_RS02335 PF08534 Redoxin DMR_RS02345 PF01926 50S ribosome-binding GTPase DMR_RS02345 PF06071 Protein of unknown function (DUF933) DMR_RS02350 PF02570 Precorrin-8X methylmutase DMR_RS02380 PF14535 AMP-binding enzyme C-terminal domain DMR_RS02380 PF00501 AMP-binding enzyme DMR_RS02385 PF00258 Flavodoxin DMR_RS02385 PF00753 Metallo-beta-lactamase superfamily DMR_RS02405 PF01118 Semialdehyde dehydrogenase, NAD binding domain DMR_RS02405 PF02774 Semialdehyde dehydrogenase, dimerisation domain DMR_RS02415 PF02887 Pyruvate kinase, alpha/beta domain DMR_RS02415 PF00224 Pyruvate kinase, barrel domain DMR_RS02420 PF01914 MarC family integral membrane protein DMR_RS02425 PF07690 Major Facilitator Superfamily DMR_RS02430 PF01895 PhoU domain DMR_RS02440 PF02954 Bacterial regulatory protein, Fis family DMR_RS02440 PF00072 Response regulator receiver domain DMR_RS02440 PF00158 Sigma-54 interaction domain DMR_RS02450 PF00290 Tryptophan synthase alpha chain DMR_RS02455 PF00291 Pyridoxal-phosphate dependent enzyme DMR_RS02460 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DMR_RS02465 PF00218 Indole-3-glycerol phosphate synthase DMR_RS02470 PF02885 Glycosyl transferase family, helical bundle domain DMR_RS02470 PF00591 Glycosyl transferase family, a/b domain DMR_RS02475 PF05168 HEPN domain DMR_RS02480 PF00117 Glutamine amidotransferase class-I DMR_RS02485 PF00425 chorismate binding enzyme DMR_RS02485 PF04715 Anthranilate synthase component I, N terminal region DMR_RS02490 PF02153 Prephenate dehydrogenase DMR_RS02490 PF01817 Chorismate mutase type II DMR_RS02495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DMR_RS02500 PF01842 ACT domain DMR_RS02500 PF01817 Chorismate mutase type II DMR_RS02500 PF00800 Prephenate dehydratase DMR_RS02505 PF01959 3-dehydroquinate synthase II DMR_RS02510 PF01791 DeoC/LacD family aldolase DMR_RS02520 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit DMR_RS02520 PF13187 4Fe-4S dicluster domain DMR_RS02525 PF00890 FAD binding domain DMR_RS02560 PF07228 Stage II sporulation protein E (SpoIIE) DMR_RS02560 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DMR_RS02565 PF01471 Putative peptidoglycan binding domain DMR_RS02565 PF01476 LysM domain DMR_RS02565 PF01510 N-acetylmuramoyl-L-alanine amidase DMR_RS02570 PF11871 Domain of unknown function (DUF3391) DMR_RS02570 PF01966 HD domain DMR_RS02575 PF00672 HAMP domain DMR_RS02575 PF02743 Cache domain DMR_RS02575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS02595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DMR_RS02600 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DMR_RS02600 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DMR_RS02605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DMR_RS02605 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DMR_RS02620 PF03819 MazG nucleotide pyrophosphohydrolase domain DMR_RS02620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMR_RS02625 PF02674 Colicin V production protein DMR_RS02630 PF07724 AAA domain (Cdc48 subfamily) DMR_RS02630 PF10431 C-terminal, D2-small domain, of ClpB protein DMR_RS02630 PF06689 ClpX C4-type zinc finger DMR_RS02635 PF01872 RibD C-terminal domain DMR_RS02635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMR_RS02640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMR_RS02650 PF00939 Sodium:sulfate symporter transmembrane region DMR_RS02670 PF00072 Response regulator receiver domain DMR_RS02670 PF09308 LuxQ, periplasmic DMR_RS02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS02670 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS02675 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS02675 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS02680 PF02954 Bacterial regulatory protein, Fis family DMR_RS02680 PF00158 Sigma-54 interaction domain DMR_RS02680 PF00072 Response regulator receiver domain DMR_RS02685 PF03605 Anaerobic c4-dicarboxylate membrane transporter DMR_RS02690 PF05681 Fumarate hydratase (Fumerase) DMR_RS02695 PF05683 Fumarase C-terminus DMR_RS02695 PF05681 Fumarate hydratase (Fumerase) DMR_RS02700 PF00375 Sodium:dicarboxylate symporter family DMR_RS02710 PF02910 Fumarate reductase flavoprotein C-term DMR_RS02710 PF00890 FAD binding domain DMR_RS02715 PF13085 2Fe-2S iron-sulfur cluster binding domain DMR_RS02715 PF13183 4Fe-4S dicluster domain DMR_RS02725 PF02653 Branched-chain amino acid transport system / permease component DMR_RS02735 PF00005 ABC transporter DMR_RS02735 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMR_RS02740 PF00005 ABC transporter DMR_RS02750 PF01614 Bacterial transcriptional regulator DMR_RS02750 PF09339 IclR helix-turn-helix domain DMR_RS02760 PF02653 Branched-chain amino acid transport system / permease component DMR_RS02765 PF02653 Branched-chain amino acid transport system / permease component DMR_RS02765 PF11862 Domain of unknown function (DUF3382) DMR_RS02770 PF00005 ABC transporter DMR_RS02770 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMR_RS02775 PF00005 ABC transporter DMR_RS02785 PF00291 Pyridoxal-phosphate dependent enzyme DMR_RS02785 PF13291 ACT domain DMR_RS02810 PF00111 2Fe-2S iron-sulfur cluster binding domain DMR_RS02810 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DMR_RS02810 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DMR_RS02810 PF01799 [2Fe-2S] binding domain DMR_RS02825 PF01209 ubiE/COQ5 methyltransferase family DMR_RS02835 PF04055 Radical SAM superfamily DMR_RS02835 PF06463 Molybdenum Cofactor Synthesis C DMR_RS02840 PF14535 AMP-binding enzyme C-terminal domain DMR_RS02840 PF00501 AMP-binding enzyme DMR_RS02845 PF02625 XdhC and CoxI family DMR_RS02845 PF13478 XdhC Rossmann domain DMR_RS02855 PF00563 EAL domain DMR_RS02855 PF03707 Bacterial signalling protein N terminal repeat DMR_RS02855 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS02875 PF03951 Glutamine synthetase, beta-Grasp domain DMR_RS02875 PF00120 Glutamine synthetase, catalytic domain DMR_RS02880 PF09335 SNARE associated Golgi protein DMR_RS02885 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DMR_RS02885 PF01189 16S rRNA methyltransferase RsmB/F DMR_RS02885 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DMR_RS02890 PF01791 DeoC/LacD family aldolase DMR_RS02905 PF02743 Cache domain DMR_RS02905 PF00672 HAMP domain DMR_RS02905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS02915 PF01687 Riboflavin kinase DMR_RS02915 PF06574 FAD synthetase DMR_RS02945 PF00034 Cytochrome c DMR_RS02960 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS02960 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS02960 PF01627 Hpt domain DMR_RS02960 PF00072 Response regulator receiver domain DMR_RS02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS02960 PF00672 HAMP domain DMR_RS02995 PF00072 Response regulator receiver domain DMR_RS02995 PF00158 Sigma-54 interaction domain DMR_RS03010 PF01008 Initiation factor 2 subunit family DMR_RS03010 PF03061 Thioesterase superfamily DMR_RS03045 PF03600 Citrate transporter DMR_RS03055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMR_RS03055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMR_RS03065 PF01435 Peptidase family M48 DMR_RS03080 PF03264 NapC/NirT cytochrome c family, N-terminal region DMR_RS03085 PF02335 Cytochrome c552 DMR_RS03100 PF03459 TOBE domain DMR_RS03105 PF01042 Endoribonuclease L-PSP DMR_RS03120 PF01869 BadF/BadG/BcrA/BcrD ATPase family DMR_RS03125 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DMR_RS03150 PF00501 AMP-binding enzyme DMR_RS03150 PF13193 AMP-binding enzyme C-terminal domain DMR_RS03150 PF16177 Acetyl-coenzyme A synthetase N-terminus DMR_RS03155 PF04397 LytTr DNA-binding domain DMR_RS03160 PF00437 Type II/IV secretion system protein DMR_RS03165 PF00437 Type II/IV secretion system protein DMR_RS03195 PF03958 Bacterial type II/III secretion system short domain DMR_RS03195 PF00263 Bacterial type II and III secretion system protein DMR_RS03205 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DMR_RS03205 PF00437 Type II/IV secretion system protein DMR_RS03210 PF00482 Type II secretion system (T2SS), protein F DMR_RS03215 PF00158 Sigma-54 interaction domain DMR_RS03215 PF13185 GAF domain DMR_RS03215 PF02954 Bacterial regulatory protein, Fis family DMR_RS03220 PF07963 Prokaryotic N-terminal methylation motif DMR_RS03220 PF00114 Pilin (bacterial filament) DMR_RS03230 PF07963 Prokaryotic N-terminal methylation motif DMR_RS03255 PF01464 Transglycosylase SLT domain DMR_RS03260 PF02627 Carboxymuconolactone decarboxylase family DMR_RS03290 PF13614 AAA domain DMR_RS03300 PF01554 MatE DMR_RS03305 PF01209 ubiE/COQ5 methyltransferase family DMR_RS03310 PF08241 Methyltransferase domain DMR_RS03315 PF01654 Cytochrome bd terminal oxidase subunit I DMR_RS03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS03330 PF13426 PAS domain DMR_RS03330 PF00072 Response regulator receiver domain DMR_RS03340 PF00072 Response regulator receiver domain DMR_RS03345 PF13466 STAS domain DMR_RS03345 PF07228 Stage II sporulation protein E (SpoIIE) DMR_RS03345 PF08448 PAS fold DMR_RS03345 PF13581 Histidine kinase-like ATPase domain DMR_RS03350 PF13361 UvrD-like helicase C-terminal domain DMR_RS03350 PF00580 UvrD/REP helicase N-terminal domain DMR_RS03370 PF01814 Hemerythrin HHE cation binding domain DMR_RS03450 PF13419 Haloacid dehalogenase-like hydrolase DMR_RS03455 PF00589 Phage integrase family DMR_RS03485 PF13847 Methyltransferase domain DMR_RS03515 PF07690 Major Facilitator Superfamily DMR_RS03530 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS03530 PF17151 Periplasmic sensor domain DMR_RS03535 PF08501 Shikimate dehydrogenase substrate binding domain DMR_RS03535 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DMR_RS03535 PF01488 Shikimate / quinate 5-dehydrogenase DMR_RS03550 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DMR_RS03550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DMR_RS03550 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DMR_RS03560 PF02547 Queuosine biosynthesis protein DMR_RS03575 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMR_RS03575 PF00691 OmpA family DMR_RS03580 PF01618 MotA/TolQ/ExbB proton channel family DMR_RS03585 PF01043 SecA preprotein cross-linking domain DMR_RS03585 PF07517 SecA DEAD-like domain DMR_RS03585 PF02810 SEC-C motif DMR_RS03585 PF07516 SecA Wing and Scaffold domain DMR_RS03590 PF02754 Cysteine-rich domain DMR_RS03590 PF13183 4Fe-4S dicluster domain DMR_RS03595 PF01565 FAD binding domain DMR_RS03595 PF02913 FAD linked oxidases, C-terminal domain DMR_RS03605 PF01668 SmpB protein DMR_RS03610 PF05524 PEP-utilising enzyme, N-terminal DMR_RS03610 PF02896 PEP-utilising enzyme, TIM barrel domain DMR_RS03610 PF00391 PEP-utilising enzyme, mobile domain DMR_RS03635 PF01209 ubiE/COQ5 methyltransferase family DMR_RS03640 PF00535 Glycosyl transferase family 2 DMR_RS03650 PF03559 NDP-hexose 2,3-dehydratase DMR_RS03660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DMR_RS03670 PF01568 Molydopterin dinucleotide binding domain DMR_RS03670 PF00384 Molybdopterin oxidoreductase DMR_RS03675 PF01053 Cys/Met metabolism PLP-dependent enzyme DMR_RS03680 PF00117 Glutamine amidotransferase class-I DMR_RS03695 PF04172 LrgB-like family DMR_RS03705 PF03466 LysR substrate binding domain DMR_RS03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMR_RS03710 PF10417 C-terminal domain of 1-Cys peroxiredoxin DMR_RS03710 PF00578 AhpC/TSA family DMR_RS03725 PF17202 Single cache domain 3 DMR_RS03725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS03725 PF00672 HAMP domain DMR_RS03730 PF04015 Domain of unknown function (DUF362) DMR_RS03740 PF01938 TRAM domain DMR_RS03740 PF05958 tRNA (Uracil-5-)-methyltransferase DMR_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS03745 PF00989 PAS fold DMR_RS03745 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS03755 PF00672 HAMP domain DMR_RS03755 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS03760 PF00486 Transcriptional regulatory protein, C terminal DMR_RS03760 PF00072 Response regulator receiver domain DMR_RS03775 PF00037 4Fe-4S binding domain DMR_RS03775 PF02256 Iron hydrogenase small subunit DMR_RS03775 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DMR_RS03775 PF02906 Iron only hydrogenase large subunit, C-terminal domain DMR_RS03780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DMR_RS03780 PF00037 4Fe-4S binding domain DMR_RS03780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DMR_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS03790 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS03790 PF00072 Response regulator receiver domain DMR_RS03790 PF09308 LuxQ, periplasmic DMR_RS03795 PF01177 Asp/Glu/Hydantoin racemase DMR_RS03805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMR_RS03810 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMR_RS03815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DMR_RS03815 PF00361 Proton-conducting membrane transporter DMR_RS03830 PF00361 Proton-conducting membrane transporter DMR_RS03835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS03835 PF13426 PAS domain DMR_RS03835 PF00672 HAMP domain DMR_RS03840 PF13847 Methyltransferase domain DMR_RS03845 PF02810 SEC-C motif DMR_RS03850 PF06962 Putative rRNA methylase DMR_RS03885 PF04468 PSP1 C-terminal conserved region DMR_RS03890 PF09334 tRNA synthetases class I (M) DMR_RS03890 PF00133 tRNA synthetases class I (I, L, M and V) DMR_RS03890 PF01588 Putative tRNA binding domain DMR_RS03895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS03895 PF00672 HAMP domain DMR_RS03895 PF02743 Cache domain DMR_RS03900 PF00563 EAL domain DMR_RS03900 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS03900 PF03707 Bacterial signalling protein N terminal repeat DMR_RS03910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DMR_RS03910 PF03900 Porphobilinogen deaminase, C-terminal domain DMR_RS03920 PF13580 SIS domain DMR_RS03925 PF01202 Shikimate kinase DMR_RS03950 PF00005 ABC transporter DMR_RS03950 PF12704 MacB-like periplasmic core domain DMR_RS03950 PF02687 FtsX-like permease family DMR_RS03970 PF02464 Competence-damaged protein DMR_RS03970 PF00994 Probable molybdopterin binding domain DMR_RS03975 PF01047 MarR family DMR_RS03980 PF10518 TAT (twin-arginine translocation) pathway signal sequence DMR_RS03980 PF01568 Molydopterin dinucleotide binding domain DMR_RS03980 PF00384 Molybdopterin oxidoreductase DMR_RS03980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS03985 PF13237 4Fe-4S dicluster domain DMR_RS03990 PF12800 4Fe-4S binding domain DMR_RS03990 PF13247 4Fe-4S dicluster domain DMR_RS04010 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS04015 PF00465 Iron-containing alcohol dehydrogenase DMR_RS04025 PF07690 Major Facilitator Superfamily DMR_RS04030 PF00529 HlyD membrane-fusion protein of T1SS DMR_RS04030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMR_RS04040 PF01566 Natural resistance-associated macrophage protein DMR_RS04060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04060 PF00672 HAMP domain DMR_RS04070 PF00860 Permease family DMR_RS04080 PF00535 Glycosyl transferase family 2 DMR_RS04095 PF00704 Glycosyl hydrolases family 18 DMR_RS04105 PF02915 Rubrerythrin DMR_RS04110 PF00578 AhpC/TSA family DMR_RS04120 PF01053 Cys/Met metabolism PLP-dependent enzyme DMR_RS04130 PF00245 Alkaline phosphatase DMR_RS04140 PF03062 MBOAT, membrane-bound O-acyltransferase family DMR_RS04170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04170 PF00672 HAMP domain DMR_RS04170 PF02743 Cache domain DMR_RS04185 PF00672 HAMP domain DMR_RS04185 PF08448 PAS fold DMR_RS04185 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB DMR_RS04185 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS04195 PF01384 Phosphate transporter family DMR_RS04210 PF00672 HAMP domain DMR_RS04210 PF07228 Stage II sporulation protein E (SpoIIE) DMR_RS04215 PF09084 NMT1/THI5 like DMR_RS04220 PF01790 Prolipoprotein diacylglyceryl transferase DMR_RS04235 PF04055 Radical SAM superfamily DMR_RS04245 PF11066 Protein of unknown function (DUF2867) DMR_RS04245 PF13460 NAD(P)H-binding DMR_RS04255 PF16591 Helical bimodular sensor domain DMR_RS04255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04255 PF16591 Helical bimodular sensor domain DMR_RS04255 PF00672 HAMP domain DMR_RS04255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04255 PF00672 HAMP domain DMR_RS04265 PF02515 CoA-transferase family III DMR_RS04300 PF00589 Phage integrase family DMR_RS04335 PF00072 Response regulator receiver domain DMR_RS04340 PF01339 CheB methylesterase DMR_RS04340 PF00072 Response regulator receiver domain DMR_RS04375 PF03831 PhnA domain DMR_RS04375 PF08274 PhnA Zinc-Ribbon DMR_RS04385 PF00005 ABC transporter DMR_RS04400 PF02653 Branched-chain amino acid transport system / permease component DMR_RS04405 PF00501 AMP-binding enzyme DMR_RS04410 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMR_RS04410 PF00005 ABC transporter DMR_RS04425 PF05717 IS66 Orf2 like protein DMR_RS04430 PF13817 IS66 C-terminal element DMR_RS04430 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS04430 PF03050 Transposase IS66 family DMR_RS04430 PF13007 Transposase C of IS166 homeodomain DMR_RS04455 PF03050 Transposase IS66 family DMR_RS04455 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS04455 PF13007 Transposase C of IS166 homeodomain DMR_RS04455 PF13817 IS66 C-terminal element DMR_RS04460 PF05717 IS66 Orf2 like protein DMR_RS04480 PF00486 Transcriptional regulatory protein, C terminal DMR_RS04480 PF00072 Response regulator receiver domain DMR_RS04485 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS04485 PF02702 Osmosensitive K+ channel His kinase sensor domain DMR_RS04485 PF13493 Domain of unknown function (DUF4118) DMR_RS04485 PF13492 GAF domain DMR_RS04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS04490 PF02669 K+-transporting ATPase, c chain DMR_RS04500 PF03814 Potassium-transporting ATPase A subunit DMR_RS04505 PF01584 CheW-like domain DMR_RS04520 PF00589 Phage integrase family DMR_RS04525 PF00589 Phage integrase family DMR_RS04555 PF00072 Response regulator receiver domain DMR_RS04555 PF01339 CheB methylesterase DMR_RS04560 PF00672 HAMP domain DMR_RS04560 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS04560 PF13426 PAS domain DMR_RS04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS04570 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS04570 PF00072 Response regulator receiver domain DMR_RS04580 PF00589 Phage integrase family DMR_RS04585 PF00589 Phage integrase family DMR_RS04620 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS04620 PF00072 Response regulator receiver domain DMR_RS04620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS04620 PF09308 LuxQ, periplasmic DMR_RS04625 PF02743 Cache domain DMR_RS04625 PF02743 Cache domain DMR_RS04625 PF00672 HAMP domain DMR_RS04625 PF00672 HAMP domain DMR_RS04625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04630 PF01584 CheW-like domain DMR_RS04650 PF00589 Phage integrase family DMR_RS04690 PF00669 Bacterial flagellin N-terminal helical region DMR_RS04690 PF00700 Bacterial flagellin C-terminal helical region DMR_RS04700 PF00669 Bacterial flagellin N-terminal helical region DMR_RS04700 PF00700 Bacterial flagellin C-terminal helical region DMR_RS04705 PF00700 Bacterial flagellin C-terminal helical region DMR_RS04705 PF00669 Bacterial flagellin N-terminal helical region DMR_RS04735 PF00989 PAS fold DMR_RS04735 PF00072 Response regulator receiver domain DMR_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS04735 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS04735 PF18415 Histidine kinase receptor ArcB trans-membrane domain DMR_RS04735 PF01627 Hpt domain DMR_RS04745 PF01584 CheW-like domain DMR_RS04745 PF00072 Response regulator receiver domain DMR_RS04755 PF02743 Cache domain DMR_RS04755 PF00672 HAMP domain DMR_RS04755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04755 PF02743 Cache domain DMR_RS04755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04755 PF00672 HAMP domain DMR_RS04760 PF01584 CheW-like domain DMR_RS04785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DMR_RS04785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMR_RS04785 PF03129 Anticodon binding domain DMR_RS04790 PF05198 Translation initiation factor IF-3, N-terminal domain DMR_RS04790 PF00707 Translation initiation factor IF-3, C-terminal domain DMR_RS04795 PF01632 Ribosomal protein L35 DMR_RS04800 PF00453 Ribosomal protein L20 DMR_RS04805 PF01409 tRNA synthetases class II core domain (F) DMR_RS04805 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DMR_RS04810 PF03484 tRNA synthetase B5 domain DMR_RS04810 PF01588 Putative tRNA binding domain DMR_RS04810 PF03483 B3/4 domain DMR_RS04810 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DMR_RS04810 PF03147 Ferredoxin-fold anticodon binding domain DMR_RS04830 PF04542 Sigma-70 region 2 DMR_RS04830 PF08281 Sigma-70, region 4 DMR_RS04845 PF00561 alpha/beta hydrolase fold DMR_RS04850 PF13411 MerR HTH family regulatory protein DMR_RS04855 PF18318 Glutamine synthetase C-terminal domain DMR_RS04855 PF12437 Glutamine synthetase type III N terminal DMR_RS04855 PF00120 Glutamine synthetase, catalytic domain DMR_RS04860 PF00672 HAMP domain DMR_RS04860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS04860 PF13426 PAS domain DMR_RS04870 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DMR_RS04875 PF12704 MacB-like periplasmic core domain DMR_RS04875 PF02687 FtsX-like permease family DMR_RS04875 PF00005 ABC transporter DMR_RS04885 PF00072 Response regulator receiver domain DMR_RS04885 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS04885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS04885 PF13188 PAS domain DMR_RS04885 PF08448 PAS fold DMR_RS04890 PF02954 Bacterial regulatory protein, Fis family DMR_RS04890 PF00072 Response regulator receiver domain DMR_RS04890 PF00158 Sigma-54 interaction domain DMR_RS04895 PF02190 ATP-dependent protease La (LON) substrate-binding domain DMR_RS04895 PF05362 Lon protease (S16) C-terminal proteolytic domain DMR_RS04895 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS04910 PF01925 Sulfite exporter TauE/SafE DMR_RS04935 PF13536 Putative multidrug resistance efflux transporter DMR_RS04950 PF00072 Response regulator receiver domain DMR_RS04955 PF00072 Response regulator receiver domain DMR_RS04955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS04960 PF08448 PAS fold DMR_RS04960 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS04960 PF13188 PAS domain DMR_RS04960 PF00072 Response regulator receiver domain DMR_RS04970 PF01169 Uncharacterized protein family UPF0016 DMR_RS04975 PF12727 PBP superfamily domain DMR_RS04980 PF00795 Carbon-nitrogen hydrolase DMR_RS04995 PF03453 MoeA N-terminal region (domain I and II) DMR_RS04995 PF00994 Probable molybdopterin binding domain DMR_RS04995 PF03454 MoeA C-terminal region (domain IV) DMR_RS05010 PF01594 AI-2E family transporter DMR_RS05020 PF01739 CheR methyltransferase, SAM binding domain DMR_RS05020 PF03705 CheR methyltransferase, all-alpha domain DMR_RS05020 PF08448 PAS fold DMR_RS05020 PF01339 CheB methylesterase DMR_RS05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS05040 PF00989 PAS fold DMR_RS05040 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS05055 PF00672 HAMP domain DMR_RS05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS05055 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS05065 PF00156 Phosphoribosyl transferase domain DMR_RS05075 PF00753 Metallo-beta-lactamase superfamily DMR_RS05135 PF10609 NUBPL iron-transfer P-loop NTPase DMR_RS05160 PF00501 AMP-binding enzyme DMR_RS05160 PF14535 AMP-binding enzyme C-terminal domain DMR_RS05165 PF00005 ABC transporter DMR_RS05170 PF00005 ABC transporter DMR_RS05170 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMR_RS05175 PF02653 Branched-chain amino acid transport system / permease component DMR_RS05175 PF11862 Domain of unknown function (DUF3382) DMR_RS05200 PF02535 ZIP Zinc transporter DMR_RS05205 PF09335 SNARE associated Golgi protein DMR_RS05210 PF00183 Hsp90 protein DMR_RS05220 PF00011 Hsp20/alpha crystallin family DMR_RS05230 PF00216 Bacterial DNA-binding protein DMR_RS05245 PF12833 Helix-turn-helix domain DMR_RS05260 PF01026 TatD related DNase DMR_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS05270 PF00072 Response regulator receiver domain DMR_RS05275 PF01627 Hpt domain DMR_RS05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS05275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS05275 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS05275 PF00672 HAMP domain DMR_RS05275 PF00072 Response regulator receiver domain DMR_RS05285 PF00557 Metallopeptidase family M24 DMR_RS05285 PF01321 Creatinase/Prolidase N-terminal domain DMR_RS05295 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DMR_RS05305 PF10437 Bacterial lipoate protein ligase C-terminus DMR_RS05305 PF03099 Biotin/lipoate A/B protein ligase family DMR_RS05310 PF03109 ABC1 family DMR_RS05315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DMR_RS05315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DMR_RS05320 PF03952 Enolase, N-terminal domain DMR_RS05320 PF00113 Enolase, C-terminal TIM barrel domain DMR_RS05330 PF03309 Type III pantothenate kinase DMR_RS05335 PF13472 GDSL-like Lipase/Acylhydrolase family DMR_RS05340 PF00005 ABC transporter DMR_RS05350 PF00075 RNase H DMR_RS05375 PF00583 Acetyltransferase (GNAT) family DMR_RS05375 PF13380 CoA binding domain DMR_RS05375 PF13607 Succinyl-CoA ligase like flavodoxin domain DMR_RS05380 PF00378 Enoyl-CoA hydratase/isomerase DMR_RS05395 PF17805 AsnC-like ligand binding domain DMR_RS05400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DMR_RS05400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DMR_RS05405 PF01888 CbiD DMR_RS05410 PF07685 CobB/CobQ-like glutamine amidotransferase domain DMR_RS05410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DMR_RS05415 PF01894 Uncharacterised protein family UPF0047 DMR_RS05420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMR_RS05425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMR_RS05440 PF03109 ABC1 family DMR_RS05460 PF01272 Transcription elongation factor, GreA/GreB, C-term DMR_RS05460 PF03449 Transcription elongation factor, N-terminal DMR_RS05465 PF05014 Nucleoside 2-deoxyribosyltransferase DMR_RS05480 PF04023 FeoA domain DMR_RS05480 PF07664 Ferrous iron transport protein B C terminus DMR_RS05480 PF02421 Ferrous iron transport protein B DMR_RS05480 PF07670 Nucleoside recognition DMR_RS05480 PF17910 FeoB cytosolic helical domain DMR_RS05485 PF00005 ABC transporter DMR_RS05490 PF00005 ABC transporter DMR_RS05495 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS05500 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS05505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DMR_RS05510 PF01842 ACT domain DMR_RS05510 PF00551 Formyl transferase DMR_RS05520 PF02653 Branched-chain amino acid transport system / permease component DMR_RS05525 PF02653 Branched-chain amino acid transport system / permease component DMR_RS05525 PF11862 Domain of unknown function (DUF3382) DMR_RS05530 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMR_RS05530 PF00005 ABC transporter DMR_RS05535 PF00005 ABC transporter DMR_RS05560 PF00164 Ribosomal protein S12/S23 DMR_RS05565 PF00177 Ribosomal protein S7p/S5e DMR_RS05570 PF00679 Elongation factor G C-terminus DMR_RS05570 PF00009 Elongation factor Tu GTP binding domain DMR_RS05570 PF03144 Elongation factor Tu domain 2 DMR_RS05570 PF03764 Elongation factor G, domain IV DMR_RS05570 PF14492 Elongation Factor G, domain II DMR_RS05575 PF00009 Elongation factor Tu GTP binding domain DMR_RS05575 PF03144 Elongation factor Tu domain 2 DMR_RS05575 PF03143 Elongation factor Tu C-terminal domain DMR_RS05580 PF00338 Ribosomal protein S10p/S20e DMR_RS05585 PF00297 Ribosomal protein L3 DMR_RS05590 PF00573 Ribosomal protein L4/L1 family DMR_RS05595 PF00276 Ribosomal protein L23 DMR_RS05600 PF00181 Ribosomal Proteins L2, RNA binding domain DMR_RS05600 PF03947 Ribosomal Proteins L2, C-terminal domain DMR_RS05605 PF00203 Ribosomal protein S19 DMR_RS05610 PF00237 Ribosomal protein L22p/L17e DMR_RS05615 PF00189 Ribosomal protein S3, C-terminal domain DMR_RS05615 PF07650 KH domain DMR_RS05620 PF00252 Ribosomal protein L16p/L10e DMR_RS05625 PF00831 Ribosomal L29 protein DMR_RS05630 PF00366 Ribosomal protein S17 DMR_RS05635 PF00238 Ribosomal protein L14p/L23e DMR_RS05640 PF00467 KOW motif DMR_RS05640 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DMR_RS05645 PF00673 ribosomal L5P family C-terminus DMR_RS05645 PF00281 Ribosomal protein L5 DMR_RS05650 PF00410 Ribosomal protein S8 DMR_RS05655 PF00347 Ribosomal protein L6 DMR_RS05660 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DMR_RS05665 PF00333 Ribosomal protein S5, N-terminal domain DMR_RS05665 PF03719 Ribosomal protein S5, C-terminal domain DMR_RS05670 PF00327 Ribosomal protein L30p/L7e DMR_RS05675 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DMR_RS05680 PF00344 SecY translocase DMR_RS05685 PF00557 Metallopeptidase family M24 DMR_RS05690 PF00416 Ribosomal protein S13/S18 DMR_RS05695 PF00411 Ribosomal protein S11 DMR_RS05700 PF00163 Ribosomal protein S4/S9 N-terminal domain DMR_RS05700 PF01479 S4 domain DMR_RS05705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DMR_RS05705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DMR_RS05705 PF01000 RNA polymerase Rpb3/RpoA insert domain DMR_RS05710 PF01196 Ribosomal protein L17 DMR_RS05715 PF03466 LysR substrate binding domain DMR_RS05715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMR_RS05725 PF00669 Bacterial flagellin N-terminal helical region DMR_RS05725 PF00700 Bacterial flagellin C-terminal helical region DMR_RS05730 PF12849 PBP superfamily domain DMR_RS05735 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS05740 PF00005 ABC transporter DMR_RS05750 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS05750 PF00989 PAS fold DMR_RS05750 PF00672 HAMP domain DMR_RS05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS05770 PF00672 HAMP domain DMR_RS05770 PF02743 Cache domain DMR_RS05770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS05780 PF00571 CBS domain DMR_RS05785 PF00543 Nitrogen regulatory protein P-II DMR_RS05790 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DMR_RS05805 PF01048 Phosphorylase superfamily DMR_RS05810 PF01618 MotA/TolQ/ExbB proton channel family DMR_RS05815 PF00691 OmpA family DMR_RS05815 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMR_RS05825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMR_RS05825 PF02785 Biotin carboxylase C-terminal domain DMR_RS05825 PF00289 Biotin carboxylase, N-terminal domain DMR_RS05830 PF01039 Carboxyl transferase domain DMR_RS05830 PF17848 Acetyl-coA carboxylase zinc finger domain DMR_RS05845 PF00436 Single-strand binding protein family DMR_RS05850 PF00403 Heavy-metal-associated domain DMR_RS05855 PF13411 MerR HTH family regulatory protein DMR_RS05860 PF00893 Small Multidrug Resistance protein DMR_RS05870 PF00486 Transcriptional regulatory protein, C terminal DMR_RS05870 PF00072 Response regulator receiver domain DMR_RS05875 PF00072 Response regulator receiver domain DMR_RS05880 PF08447 PAS fold DMR_RS05880 PF08448 PAS fold DMR_RS05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS05890 PF02085 Class III cytochrome C family DMR_RS05895 PF13247 4Fe-4S dicluster domain DMR_RS05900 PF03916 Polysulphide reductase, NrfD DMR_RS05910 PF02754 Cysteine-rich domain DMR_RS05915 PF00582 Universal stress protein family DMR_RS05920 PF00072 Response regulator receiver domain DMR_RS05925 PF00158 Sigma-54 interaction domain DMR_RS05925 PF02954 Bacterial regulatory protein, Fis family DMR_RS05925 PF00072 Response regulator receiver domain DMR_RS05935 PF03773 Predicted permease DMR_RS05940 PF06472 ABC transporter transmembrane region 2 DMR_RS05940 PF00005 ABC transporter DMR_RS05945 PF02256 Iron hydrogenase small subunit DMR_RS05950 PF13187 4Fe-4S dicluster domain DMR_RS05950 PF02906 Iron only hydrogenase large subunit, C-terminal domain DMR_RS05955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMR_RS05955 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS05960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMR_RS05965 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS05980 PF00158 Sigma-54 interaction domain DMR_RS05980 PF02954 Bacterial regulatory protein, Fis family DMR_RS05980 PF00072 Response regulator receiver domain DMR_RS05990 PF16363 GDP-mannose 4,6 dehydratase DMR_RS06005 PF00005 ABC transporter DMR_RS06005 PF00664 ABC transporter transmembrane region DMR_RS06010 PF00535 Glycosyl transferase family 2 DMR_RS06020 PF08448 PAS fold DMR_RS06020 PF08447 PAS fold DMR_RS06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS06030 PF00158 Sigma-54 interaction domain DMR_RS06030 PF00072 Response regulator receiver domain DMR_RS06030 PF02954 Bacterial regulatory protein, Fis family DMR_RS06035 PF01339 CheB methylesterase DMR_RS06035 PF00072 Response regulator receiver domain DMR_RS06045 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS06050 PF00072 Response regulator receiver domain DMR_RS06050 PF00196 Bacterial regulatory proteins, luxR family DMR_RS06055 PF13188 PAS domain DMR_RS06055 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS06055 PF08448 PAS fold DMR_RS06055 PF00072 Response regulator receiver domain DMR_RS06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS06060 PF02954 Bacterial regulatory protein, Fis family DMR_RS06060 PF00158 Sigma-54 interaction domain DMR_RS06060 PF00072 Response regulator receiver domain DMR_RS06065 PF00072 Response regulator receiver domain DMR_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS06065 PF13188 PAS domain DMR_RS06065 PF08448 PAS fold DMR_RS06065 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS06070 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS06075 PF01625 Peptide methionine sulfoxide reductase DMR_RS06075 PF01641 SelR domain DMR_RS06080 PF00072 Response regulator receiver domain DMR_RS06130 PF00361 Proton-conducting membrane transporter DMR_RS06135 PF00361 Proton-conducting membrane transporter DMR_RS06140 PF00361 Proton-conducting membrane transporter DMR_RS06140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DMR_RS06145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DMR_RS06150 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DMR_RS06155 PF12838 4Fe-4S dicluster domain DMR_RS06160 PF00146 NADH dehydrogenase DMR_RS06165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS06165 PF00384 Molybdopterin oxidoreductase DMR_RS06165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DMR_RS06170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DMR_RS06170 PF10531 SLBB domain DMR_RS06170 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DMR_RS06180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DMR_RS06180 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMR_RS06180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMR_RS06185 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DMR_RS06225 PF00563 EAL domain DMR_RS06225 PF12792 CSS motif domain associated with EAL DMR_RS06235 PF00535 Glycosyl transferase family 2 DMR_RS06240 PF08666 SAF domain DMR_RS06240 PF03102 NeuB family DMR_RS06245 PF00005 ABC transporter DMR_RS06250 PF03306 Alpha-acetolactate decarboxylase DMR_RS06280 PF02954 Bacterial regulatory protein, Fis family DMR_RS06280 PF00158 Sigma-54 interaction domain DMR_RS06290 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS06295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DMR_RS06295 PF07733 Bacterial DNA polymerase III alpha NTPase domain DMR_RS06295 PF01336 OB-fold nucleic acid binding domain DMR_RS06295 PF14579 Helix-hairpin-helix motif DMR_RS06295 PF02811 PHP domain DMR_RS06310 PF02580 D-Tyr-tRNA(Tyr) deacylase DMR_RS06335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DMR_RS06345 PF03963 Flagellar hook capping protein - N-terminal region DMR_RS06350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMR_RS06350 PF07559 Flagellar basal body protein FlaE DMR_RS06350 PF00460 Flagella basal body rod protein DMR_RS06355 PF00669 Bacterial flagellin N-terminal helical region DMR_RS06355 PF00700 Bacterial flagellin C-terminal helical region DMR_RS06360 PF14622 Ribonuclease-III-like DMR_RS06360 PF00035 Double-stranded RNA binding motif DMR_RS06370 PF13426 PAS domain DMR_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS06370 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS06370 PF08448 PAS fold DMR_RS06370 PF00072 Response regulator receiver domain DMR_RS06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMR_RS06380 PF03466 LysR substrate binding domain DMR_RS06390 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DMR_RS06390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DMR_RS06410 PF02146 Sir2 family DMR_RS06415 PF01618 MotA/TolQ/ExbB proton channel family DMR_RS06420 PF02472 Biopolymer transport protein ExbD/TolR DMR_RS06430 PF07676 WD40-like Beta Propeller Repeat DMR_RS06435 PF00691 OmpA family DMR_RS06450 PF00563 EAL domain DMR_RS06450 PF03707 Bacterial signalling protein N terminal repeat DMR_RS06450 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS06460 PF04608 Phosphatidylglycerophosphatase A DMR_RS06470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS06470 PF00672 HAMP domain DMR_RS06470 PF02743 Cache domain DMR_RS06480 PF02954 Bacterial regulatory protein, Fis family DMR_RS06480 PF00072 Response regulator receiver domain DMR_RS06480 PF00158 Sigma-54 interaction domain DMR_RS06520 PF00501 AMP-binding enzyme DMR_RS06520 PF13193 AMP-binding enzyme C-terminal domain DMR_RS06525 PF00083 Sugar (and other) transporter DMR_RS06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMR_RS06535 PF03466 LysR substrate binding domain DMR_RS06565 PF00072 Response regulator receiver domain DMR_RS06565 PF00196 Bacterial regulatory proteins, luxR family DMR_RS06570 PF07730 Histidine kinase DMR_RS06570 PF17200 Single Cache domain 2 DMR_RS06590 PF02954 Bacterial regulatory protein, Fis family DMR_RS06590 PF00072 Response regulator receiver domain DMR_RS06590 PF00158 Sigma-54 interaction domain DMR_RS06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS06595 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS06595 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS06600 PF03928 Haem-degrading DMR_RS06605 PF02901 Pyruvate formate lyase-like DMR_RS06605 PF01228 Glycine radical DMR_RS06610 PF04055 Radical SAM superfamily DMR_RS06650 PF09704 CRISPR-associated protein (Cas_Cas5) DMR_RS06670 PF01867 CRISPR associated protein Cas1 DMR_RS06675 PF09827 CRISPR associated protein Cas2 DMR_RS06685 PF01695 IstB-like ATP binding protein DMR_RS06690 PF00665 Integrase core domain DMR_RS06745 PF00589 Phage integrase family DMR_RS06755 PF01443 Viral (Superfamily 1) RNA helicase DMR_RS06755 PF03389 MobA/MobL family DMR_RS06755 PF17841 BID domain of Bartonella effector protein (Bep) DMR_RS06770 PF04555 Restriction endonuclease XhoI DMR_RS06775 PF12950 TaqI-like C-terminal specificity domain DMR_RS06775 PF07669 Eco57I restriction-modification methylase DMR_RS06780 PF00589 Phage integrase family DMR_RS06830 PF00468 Ribosomal protein L34 DMR_RS06835 PF00825 Ribonuclease P DMR_RS06840 PF01809 Putative membrane protein insertion efficiency factor DMR_RS06845 PF02096 60Kd inner membrane protein DMR_RS06845 PF14849 YidC periplasmic domain DMR_RS06850 PF14804 Jag N-terminus DMR_RS06850 PF01424 R3H domain DMR_RS06850 PF14804 Jag N-terminus DMR_RS06850 PF01424 R3H domain DMR_RS06855 PF00892 EamA-like transporter family DMR_RS06870 PF08240 Alcohol dehydrogenase GroES-like domain DMR_RS06870 PF00107 Zinc-binding dehydrogenase DMR_RS06880 PF06481 COX Aromatic Rich Motif DMR_RS06880 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DMR_RS06885 PF00115 Cytochrome C and Quinol oxidase polypeptide I DMR_RS06890 PF00510 Cytochrome c oxidase subunit III DMR_RS06900 PF01040 UbiA prenyltransferase family DMR_RS06905 PF00464 Serine hydroxymethyltransferase DMR_RS06935 PF05973 Phage derived protein Gp49-like (DUF891) DMR_RS06965 PF00589 Phage integrase family DMR_RS06970 PF02899 Phage integrase, N-terminal SAM-like domain DMR_RS06970 PF00589 Phage integrase family DMR_RS06975 PF13458 Periplasmic binding protein DMR_RS06980 PF13458 Periplasmic binding protein DMR_RS06995 PF02384 N-6 DNA Methylase DMR_RS07010 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DMR_RS07010 PF11867 Domain of unknown function (DUF3387) DMR_RS07010 PF18766 SWI2/SNF2 ATPase DMR_RS07045 PF00589 Phage integrase family DMR_RS07050 PF02899 Phage integrase, N-terminal SAM-like domain DMR_RS07050 PF00589 Phage integrase family DMR_RS07060 PF04055 Radical SAM superfamily DMR_RS07070 PF00586 AIR synthase related protein, N-terminal domain DMR_RS07070 PF02769 AIR synthase related protein, C-terminal domain DMR_RS07085 PF00380 Ribosomal protein S9/S16 DMR_RS07090 PF00572 Ribosomal protein L13 DMR_RS07105 PF01979 Amidohydrolase family DMR_RS07120 PF07690 Major Facilitator Superfamily DMR_RS07130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS07130 PF07730 Histidine kinase DMR_RS07135 PF00196 Bacterial regulatory proteins, luxR family DMR_RS07135 PF00072 Response regulator receiver domain DMR_RS07140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMR_RS07145 PF03313 Serine dehydratase alpha chain DMR_RS07145 PF03315 Serine dehydratase beta chain DMR_RS07155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMR_RS07160 PF01497 Periplasmic binding protein DMR_RS07165 PF00005 ABC transporter DMR_RS07170 PF01032 FecCD transport family DMR_RS07175 PF06180 Cobalt chelatase (CbiK) DMR_RS07205 PF01750 Hydrogenase maturation protease DMR_RS07210 PF00374 Nickel-dependent hydrogenase DMR_RS07215 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMR_RS07215 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DMR_RS07215 PF10518 TAT (twin-arginine translocation) pathway signal sequence DMR_RS07240 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMR_RS07240 PF00691 OmpA family DMR_RS07245 PF01618 MotA/TolQ/ExbB proton channel family DMR_RS07255 PF00561 alpha/beta hydrolase fold DMR_RS07260 PF01209 ubiE/COQ5 methyltransferase family DMR_RS07280 PF13247 4Fe-4S dicluster domain DMR_RS07285 PF01568 Molydopterin dinucleotide binding domain DMR_RS07285 PF00384 Molybdopterin oxidoreductase DMR_RS07285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS07290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS07290 PF01568 Molydopterin dinucleotide binding domain DMR_RS07290 PF00384 Molybdopterin oxidoreductase DMR_RS07305 PF00285 Citrate synthase, C-terminal domain DMR_RS07315 PF00672 HAMP domain DMR_RS07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS07315 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS07325 PF00902 Sec-independent protein translocase protein (TatC) DMR_RS07330 PF02705 K+ potassium transporter DMR_RS07360 PF04358 DsrC like protein DMR_RS07385 PF00011 Hsp20/alpha crystallin family DMR_RS07390 PF00144 Beta-lactamase DMR_RS07405 PF02666 Phosphatidylserine decarboxylase DMR_RS07410 PF01066 CDP-alcohol phosphatidyltransferase DMR_RS07415 PF00682 HMGL-like DMR_RS07415 PF08502 LeuA allosteric (dimerisation) domain DMR_RS07420 PF00330 Aconitase family (aconitate hydratase) DMR_RS07425 PF00694 Aconitase C-terminal domain DMR_RS07430 PF00180 Isocitrate/isopropylmalate dehydrogenase DMR_RS07435 PF00005 ABC transporter DMR_RS07435 PF12848 ABC transporter DMR_RS07440 PF00293 NUDIX domain DMR_RS07445 PF02219 Methylenetetrahydrofolate reductase DMR_RS07450 PF02774 Semialdehyde dehydrogenase, dimerisation domain DMR_RS07450 PF01118 Semialdehyde dehydrogenase, NAD binding domain DMR_RS07455 PF01063 Amino-transferase class IV DMR_RS07485 PF00072 Response regulator receiver domain DMR_RS07500 PF00072 Response regulator receiver domain DMR_RS07520 PF02954 Bacterial regulatory protein, Fis family DMR_RS07520 PF00072 Response regulator receiver domain DMR_RS07520 PF00158 Sigma-54 interaction domain DMR_RS07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS07525 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS07530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS07530 PF00672 HAMP domain DMR_RS07530 PF13426 PAS domain DMR_RS07535 PF00561 alpha/beta hydrolase fold DMR_RS07540 PF00691 OmpA family DMR_RS07540 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMR_RS07540 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMR_RS07540 PF00691 OmpA family DMR_RS07545 PF01618 MotA/TolQ/ExbB proton channel family DMR_RS07550 PF00027 Cyclic nucleotide-binding domain DMR_RS07550 PF07885 Ion channel DMR_RS07555 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DMR_RS07560 PF01180 Dihydroorotate dehydrogenase DMR_RS07570 PF00909 Ammonium Transporter Family DMR_RS07580 PF00005 ABC transporter DMR_RS07580 PF12704 MacB-like periplasmic core domain DMR_RS07580 PF02687 FtsX-like permease family DMR_RS07590 PF12704 MacB-like periplasmic core domain DMR_RS07590 PF02687 FtsX-like permease family DMR_RS07590 PF00005 ABC transporter DMR_RS07600 PF00633 Helix-hairpin-helix motif DMR_RS07600 PF00730 HhH-GPD superfamily base excision DNA repair protein DMR_RS07600 PF14815 NUDIX domain DMR_RS07615 PF02082 Transcriptional regulator DMR_RS07630 PF01171 PP-loop family DMR_RS07640 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DMR_RS07640 PF01488 Shikimate / quinate 5-dehydrogenase DMR_RS07640 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DMR_RS07645 PF01578 Cytochrome C assembly protein DMR_RS07650 PF10414 Sirohaem synthase dimerisation region DMR_RS07650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMR_RS07650 PF14824 Sirohaem biosynthesis protein central DMR_RS07665 PF07559 Flagellar basal body protein FlaE DMR_RS07665 PF00460 Flagella basal body rod protein DMR_RS07665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMR_RS07700 PF01810 LysE type translocator DMR_RS07705 PF13520 Amino acid permease DMR_RS07710 PF03788 LrgA family DMR_RS07715 PF04172 LrgB-like family DMR_RS07720 PF00731 AIR carboxylase DMR_RS07725 PF02540 NAD synthase DMR_RS07730 PF01969 Protein of unknown function DUF111 DMR_RS07735 PF00248 Aldo/keto reductase family DMR_RS07740 PF06719 AraC-type transcriptional regulator N-terminus DMR_RS07740 PF12833 Helix-turn-helix domain DMR_RS07765 PF09345 Domain of unknown function (DUF1987) DMR_RS07770 PF12729 Four helix bundle sensory module for signal transduction DMR_RS07770 PF00672 HAMP domain DMR_RS07770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS07780 PF07670 Nucleoside recognition DMR_RS07780 PF04023 FeoA domain DMR_RS07780 PF17910 FeoB cytosolic helical domain DMR_RS07780 PF07664 Ferrous iron transport protein B C terminus DMR_RS07780 PF02421 Ferrous iron transport protein B DMR_RS07800 PF03129 Anticodon binding domain DMR_RS07800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMR_RS07800 PF04073 Aminoacyl-tRNA editing domain DMR_RS07805 PF00465 Iron-containing alcohol dehydrogenase DMR_RS07810 PF00158 Sigma-54 interaction domain DMR_RS07810 PF13426 PAS domain DMR_RS07810 PF02954 Bacterial regulatory protein, Fis family DMR_RS07815 PF16124 RecQ zinc-binding DMR_RS07815 PF00570 HRDC domain DMR_RS07815 PF00270 DEAD/DEAH box helicase DMR_RS07815 PF00271 Helicase conserved C-terminal domain DMR_RS07815 PF09382 RQC domain DMR_RS07825 PF00731 AIR carboxylase DMR_RS07830 PF02844 Phosphoribosylglycinamide synthetase, N domain DMR_RS07830 PF02843 Phosphoribosylglycinamide synthetase, C domain DMR_RS07830 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DMR_RS07835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS07835 PF00672 HAMP domain DMR_RS07835 PF02743 Cache domain DMR_RS07865 PF17755 UvrA DNA-binding domain DMR_RS07865 PF00005 ABC transporter DMR_RS07865 PF17760 UvrA interaction domain DMR_RS07875 PF06508 Queuosine biosynthesis protein QueC DMR_RS07880 PF04055 Radical SAM superfamily DMR_RS07890 PF14489 QueF-like protein DMR_RS07905 PF01569 PAP2 superfamily DMR_RS07920 PF00753 Metallo-beta-lactamase superfamily DMR_RS07935 PF03023 Lipid II flippase MurJ DMR_RS07940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DMR_RS07940 PF06827 Zinc finger found in FPG and IleRS DMR_RS07940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DMR_RS07950 PF14535 AMP-binding enzyme C-terminal domain DMR_RS07950 PF00501 AMP-binding enzyme DMR_RS07955 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS07955 PF01627 Hpt domain DMR_RS07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS07955 PF00072 Response regulator receiver domain DMR_RS07960 PF08704 tRNA methyltransferase complex GCD14 subunit DMR_RS07970 PF12111 Polyribonucleotide phosphorylase C terminal DMR_RS07970 PF00575 S1 RNA binding domain DMR_RS07970 PF10150 Ribonuclease E/G family DMR_RS07975 PF02677 Epoxyqueuosine reductase QueH DMR_RS07980 PF03186 CobD/Cbib protein DMR_RS07990 PF14748 Pyrroline-5-carboxylate reductase dimerisation DMR_RS07990 PF03807 NADP oxidoreductase coenzyme F420-dependent DMR_RS07995 PF00334 Nucleoside diphosphate kinase DMR_RS08000 PF02641 Uncharacterized ACR, COG1993 DMR_RS08005 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DMR_RS08010 PF01592 NifU-like N terminal domain DMR_RS08010 PF04324 BFD-like [2Fe-2S] binding domain DMR_RS08010 PF01106 NifU-like domain DMR_RS08015 PF00266 Aminotransferase class-V DMR_RS08020 PF00291 Pyridoxal-phosphate dependent enzyme DMR_RS08025 PF00132 Bacterial transferase hexapeptide (six repeats) DMR_RS08035 PF03459 TOBE domain DMR_RS08040 PF04454 Encapsulating protein for peroxidase DMR_RS08055 PF04536 TPM domain DMR_RS08060 PF04011 LemA family DMR_RS08065 PF02811 PHP domain DMR_RS08070 PF02577 Bifunctional nuclease DMR_RS08075 PF04055 Radical SAM superfamily DMR_RS08075 PF00919 Uncharacterized protein family UPF0004 DMR_RS08080 PF00206 Lyase DMR_RS08080 PF10415 Fumarase C C-terminus DMR_RS08090 PF00291 Pyridoxal-phosphate dependent enzyme DMR_RS08100 PF00009 Elongation factor Tu GTP binding domain DMR_RS08125 PF01425 Amidase DMR_RS08130 PF02686 Glu-tRNAGln amidotransferase C subunit DMR_RS08140 PF00012 Hsp70 protein DMR_RS08145 PF01025 GrpE DMR_RS08150 PF01628 HrcA protein C terminal domain DMR_RS08160 PF00392 Bacterial regulatory proteins, gntR family DMR_RS08160 PF07729 FCD domain DMR_RS08180 PF03459 TOBE domain DMR_RS08180 PF00005 ABC transporter DMR_RS08190 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS08205 PF04055 Radical SAM superfamily DMR_RS08205 PF02579 Dinitrogenase iron-molybdenum cofactor DMR_RS08210 PF00148 Nitrogenase component 1 type Oxidoreductase DMR_RS08215 PF00148 Nitrogenase component 1 type Oxidoreductase DMR_RS08220 PF00171 Aldehyde dehydrogenase family DMR_RS08240 PF00912 Transglycosylase DMR_RS08240 PF00905 Penicillin binding protein transpeptidase domain DMR_RS08240 PF06832 Penicillin-Binding Protein C-terminus Family DMR_RS08245 PF00072 Response regulator receiver domain DMR_RS08260 PF06397 Desulfoferrodoxin, N-terminal domain DMR_RS08260 PF01880 Desulfoferrodoxin DMR_RS08265 PF00210 Ferritin-like domain DMR_RS08280 PF08676 MutL C terminal dimerisation domain DMR_RS08280 PF01119 DNA mismatch repair protein, C-terminal domain DMR_RS08285 PF00842 Alanine racemase, C-terminal domain DMR_RS08285 PF01168 Alanine racemase, N-terminal domain DMR_RS08300 PF03572 Peptidase family S41 DMR_RS08300 PF13180 PDZ domain DMR_RS08310 PF00211 Adenylate and Guanylate cyclase catalytic domain DMR_RS08325 PF00072 Response regulator receiver domain DMR_RS08325 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS08330 PF04055 Radical SAM superfamily DMR_RS08330 PF11842 Domain of unknown function (DUF3362) DMR_RS08330 PF08497 Radical SAM N-terminal DMR_RS08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS08340 PF00989 PAS fold DMR_RS08340 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS08345 PF13193 AMP-binding enzyme C-terminal domain DMR_RS08345 PF00501 AMP-binding enzyme DMR_RS08345 PF16177 Acetyl-coenzyme A synthetase N-terminus DMR_RS08355 PF01784 NIF3 (NGG1p interacting factor 3) DMR_RS08365 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS08370 PF00672 HAMP domain DMR_RS08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS08370 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS08370 PF00072 Response regulator receiver domain DMR_RS08370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS08370 PF01627 Hpt domain DMR_RS08380 PF07683 Cobalamin synthesis protein cobW C-terminal domain DMR_RS08380 PF02492 CobW/HypB/UreG, nucleotide-binding domain DMR_RS08395 PF00582 Universal stress protein family DMR_RS08405 PF00682 HMGL-like DMR_RS08405 PF08502 LeuA allosteric (dimerisation) domain DMR_RS08410 PF01842 ACT domain DMR_RS08410 PF13840 ACT domain DMR_RS08410 PF00696 Amino acid kinase family DMR_RS08415 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DMR_RS08425 PF01256 Carbohydrate kinase DMR_RS08425 PF03853 YjeF-related protein N-terminus DMR_RS08435 PF12706 Beta-lactamase superfamily domain DMR_RS08435 PF00753 Metallo-beta-lactamase superfamily DMR_RS08445 PF00877 NlpC/P60 family DMR_RS08460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DMR_RS08465 PF01050 Mannose-6-phosphate isomerase DMR_RS08465 PF00483 Nucleotidyl transferase DMR_RS08470 PF02085 Class III cytochrome C family DMR_RS08475 PF00384 Molybdopterin oxidoreductase DMR_RS08475 PF01568 Molydopterin dinucleotide binding domain DMR_RS08480 PF00037 4Fe-4S binding domain DMR_RS08480 PF13247 4Fe-4S dicluster domain DMR_RS08485 PF03916 Polysulphide reductase, NrfD DMR_RS08490 PF00689 Cation transporting ATPase, C-terminus DMR_RS08490 PF00690 Cation transporter/ATPase, N-terminus DMR_RS08495 PF02603 HPr Serine kinase N terminus DMR_RS08495 PF07475 HPr Serine kinase C-terminal domain DMR_RS08500 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DMR_RS08500 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DMR_RS08520 PF01384 Phosphate transporter family DMR_RS08525 PF06969 HemN C-terminal domain DMR_RS08525 PF04055 Radical SAM superfamily DMR_RS08530 PF01551 Peptidase family M23 DMR_RS08540 PF03009 Glycerophosphoryl diester phosphodiesterase family DMR_RS08565 PF00890 FAD binding domain DMR_RS08565 PF02910 Fumarate reductase flavoprotein C-term DMR_RS08570 PF02445 Quinolinate synthetase A protein DMR_RS08575 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DMR_RS08575 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DMR_RS08580 PF16193 AAA C-terminal domain DMR_RS08580 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS08580 PF12002 MgsA AAA+ ATPase C terminal DMR_RS08585 PF04452 RNA methyltransferase DMR_RS08590 PF08669 Glycine cleavage T-protein C-terminal barrel domain DMR_RS08590 PF01571 Aminomethyltransferase folate-binding domain DMR_RS08610 PF00459 Inositol monophosphatase family DMR_RS08615 PF00293 NUDIX domain DMR_RS08620 PF00583 Acetyltransferase (GNAT) family DMR_RS08625 PF00162 Phosphoglycerate kinase DMR_RS08630 PF00121 Triosephosphate isomerase DMR_RS08635 PF03840 Preprotein translocase SecG subunit DMR_RS08655 PF00580 UvrD/REP helicase N-terminal domain DMR_RS08655 PF13361 UvrD-like helicase C-terminal domain DMR_RS08670 PF08448 PAS fold DMR_RS08670 PF03705 CheR methyltransferase, all-alpha domain DMR_RS08670 PF01339 CheB methylesterase DMR_RS08670 PF01739 CheR methyltransferase, SAM binding domain DMR_RS08700 PF05717 IS66 Orf2 like protein DMR_RS08705 PF03050 Transposase IS66 family DMR_RS08705 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS08705 PF13817 IS66 C-terminal element DMR_RS08705 PF13007 Transposase C of IS166 homeodomain DMR_RS08710 PF01695 IstB-like ATP binding protein DMR_RS08770 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DMR_RS08770 PF14490 Helix-hairpin-helix containing domain DMR_RS08770 PF13538 UvrD-like helicase C-terminal domain DMR_RS08790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DMR_RS08800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DMR_RS08800 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DMR_RS08800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DMR_RS08805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMR_RS08815 PF02629 CoA binding domain DMR_RS08815 PF00549 CoA-ligase DMR_RS08825 PF00072 Response regulator receiver domain DMR_RS08825 PF01627 Hpt domain DMR_RS08825 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS08825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS08825 PF00672 HAMP domain DMR_RS08835 PF00072 Response regulator receiver domain DMR_RS08845 PF01773 Na+ dependent nucleoside transporter N-terminus DMR_RS08845 PF07662 Na+ dependent nucleoside transporter C-terminus DMR_RS08850 PF01925 Sulfite exporter TauE/SafE DMR_RS08860 PF01980 tRNA-methyltransferase O DMR_RS08860 PF18389 TrmO C-terminal domain DMR_RS08870 PF00586 AIR synthase related protein, N-terminal domain DMR_RS08870 PF02769 AIR synthase related protein, C-terminal domain DMR_RS08875 PF00294 pfkB family carbohydrate kinase DMR_RS08885 PF02954 Bacterial regulatory protein, Fis family DMR_RS08885 PF00072 Response regulator receiver domain DMR_RS08885 PF00158 Sigma-54 interaction domain DMR_RS08900 PF13649 Methyltransferase domain DMR_RS08910 PF00155 Aminotransferase class I and II DMR_RS08915 PF00202 Aminotransferase class-III DMR_RS08925 PF02308 MgtC family DMR_RS08930 PF01791 DeoC/LacD family aldolase DMR_RS08940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DMR_RS08950 PF00072 Response regulator receiver domain DMR_RS08960 PF01627 Hpt domain DMR_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS08960 PF02895 Signal transducing histidine kinase, homodimeric domain DMR_RS08960 PF01584 CheW-like domain DMR_RS08970 PF01584 CheW-like domain DMR_RS08985 PF01467 Cytidylyltransferase-like DMR_RS08985 PF00294 pfkB family carbohydrate kinase DMR_RS09000 PF01740 STAS domain DMR_RS09020 PF07549 SecD/SecF GG Motif DMR_RS09020 PF02355 Protein export membrane protein DMR_RS09040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DMR_RS09040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DMR_RS09065 PF01522 Polysaccharide deacetylase DMR_RS09070 PF03459 TOBE domain DMR_RS09075 PF07943 Penicillin-binding protein 5, C-terminal domain DMR_RS09075 PF00768 D-alanyl-D-alanine carboxypeptidase DMR_RS09115 PF00155 Aminotransferase class I and II DMR_RS09125 PF03450 CO dehydrogenase flavoprotein C-terminal domain DMR_RS09125 PF00941 FAD binding domain in molybdopterin dehydrogenase DMR_RS09130 PF01799 [2Fe-2S] binding domain DMR_RS09130 PF00111 2Fe-2S iron-sulfur cluster binding domain DMR_RS09135 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DMR_RS09135 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DMR_RS09140 PF00501 AMP-binding enzyme DMR_RS09140 PF13193 AMP-binding enzyme C-terminal domain DMR_RS09155 PF00753 Metallo-beta-lactamase superfamily DMR_RS09155 PF16123 Hydroxyacylglutathione hydrolase C-terminus DMR_RS09165 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DMR_RS09185 PF00291 Pyridoxal-phosphate dependent enzyme DMR_RS09190 PF00589 Phage integrase family DMR_RS09200 PF03459 TOBE domain DMR_RS09200 PF00005 ABC transporter DMR_RS09210 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS09230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS09230 PF00672 HAMP domain DMR_RS09230 PF16591 Helical bimodular sensor domain DMR_RS09235 PF00005 ABC transporter DMR_RS09235 PF12704 MacB-like periplasmic core domain DMR_RS09235 PF02687 FtsX-like permease family DMR_RS09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS09250 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS09255 PF00072 Response regulator receiver domain DMR_RS09255 PF02954 Bacterial regulatory protein, Fis family DMR_RS09255 PF00158 Sigma-54 interaction domain DMR_RS09260 PF00501 AMP-binding enzyme DMR_RS09260 PF13193 AMP-binding enzyme C-terminal domain DMR_RS09275 PF13193 AMP-binding enzyme C-terminal domain DMR_RS09275 PF00501 AMP-binding enzyme DMR_RS09310 PF04341 Protein of unknown function, DUF485 DMR_RS09315 PF00474 Sodium:solute symporter family DMR_RS09330 PF07733 Bacterial DNA polymerase III alpha NTPase domain DMR_RS09330 PF00929 Exonuclease DMR_RS09330 PF02811 PHP domain DMR_RS09330 PF14579 Helix-hairpin-helix motif DMR_RS09330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DMR_RS09330 PF11490 DNA polymerase III polC-type N-terminus II DMR_RS09330 PF14480 DNA polymerase III polC-type N-terminus I DMR_RS09335 PF01475 Ferric uptake regulator family DMR_RS09340 PF02915 Rubrerythrin DMR_RS09345 PF00301 Rubredoxin DMR_RS09350 PF10609 NUBPL iron-transfer P-loop NTPase DMR_RS09355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS09360 PF01594 AI-2E family transporter DMR_RS09375 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS09375 PF07689 KaiB domain DMR_RS09375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS09385 PF02954 Bacterial regulatory protein, Fis family DMR_RS09385 PF00072 Response regulator receiver domain DMR_RS09385 PF00158 Sigma-54 interaction domain DMR_RS09390 PF02687 FtsX-like permease family DMR_RS09390 PF12704 MacB-like periplasmic core domain DMR_RS09395 PF00005 ABC transporter DMR_RS09415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS09420 PF01192 RNA polymerase Rpb6 DMR_RS09425 PF00226 DnaJ domain DMR_RS09425 PF01556 DnaJ C terminal domain DMR_RS09425 PF00684 DnaJ central domain DMR_RS09435 PF01967 MoaC family DMR_RS09440 PF11870 Domain of unknown function (DUF3390) DMR_RS09440 PF13183 4Fe-4S dicluster domain DMR_RS09440 PF02589 LUD domain DMR_RS09445 PF02589 LUD domain DMR_RS09450 PF02652 L-lactate permease DMR_RS09455 PF07685 CobB/CobQ-like glutamine amidotransferase domain DMR_RS09455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DMR_RS09460 PF13380 CoA binding domain DMR_RS09460 PF00583 Acetyltransferase (GNAT) family DMR_RS09460 PF13607 Succinyl-CoA ligase like flavodoxin domain DMR_RS09470 PF01565 FAD binding domain DMR_RS09470 PF02913 FAD linked oxidases, C-terminal domain DMR_RS09475 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DMR_RS09475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DMR_RS09475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DMR_RS09475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMR_RS09475 PF10371 Domain of unknown function DMR_RS09480 PF00072 Response regulator receiver domain DMR_RS09480 PF00158 Sigma-54 interaction domain DMR_RS09480 PF02954 Bacterial regulatory protein, Fis family DMR_RS09485 PF00072 Response regulator receiver domain DMR_RS09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS09485 PF13188 PAS domain DMR_RS09485 PF08448 PAS fold DMR_RS09485 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS09490 PF02881 SRP54-type protein, helical bundle domain DMR_RS09490 PF00448 SRP54-type protein, GTPase domain DMR_RS09530 PF00152 tRNA synthetases class II (D, K and N) DMR_RS09530 PF01336 OB-fold nucleic acid binding domain DMR_RS09535 PF00535 Glycosyl transferase family 2 DMR_RS09545 PF00672 HAMP domain DMR_RS09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS09545 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS09545 PF13426 PAS domain DMR_RS09550 PF13439 Glycosyltransferase Family 4 DMR_RS09550 PF00534 Glycosyl transferases group 1 DMR_RS09560 PF13426 PAS domain DMR_RS09560 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS09560 PF00563 EAL domain DMR_RS09565 PF00005 ABC transporter DMR_RS09570 PF01895 PhoU domain DMR_RS09580 PF01933 Uncharacterised protein family UPF0052 DMR_RS09605 PF00117 Glutamine amidotransferase class-I DMR_RS09605 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DMR_RS09610 PF07478 D-ala D-ala ligase C-terminus DMR_RS09610 PF01820 D-ala D-ala ligase N-terminus DMR_RS09625 PF01455 HupF/HypC family DMR_RS09630 PF01924 Hydrogenase formation hypA family DMR_RS09635 PF00586 AIR synthase related protein, N-terminal domain DMR_RS09635 PF02769 AIR synthase related protein, C-terminal domain DMR_RS09640 PF05173 Dihydrodipicolinate reductase, C-terminus DMR_RS09640 PF01113 Dihydrodipicolinate reductase, N-terminus DMR_RS09645 PF08494 DEAD/H associated DMR_RS09645 PF00270 DEAD/DEAH box helicase DMR_RS09645 PF00271 Helicase conserved C-terminal domain DMR_RS09665 PF00072 Response regulator receiver domain DMR_RS09675 PF04011 LemA family DMR_RS09680 PF00072 Response regulator receiver domain DMR_RS09680 PF13188 PAS domain DMR_RS09680 PF08448 PAS fold DMR_RS09680 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS09685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS09685 PF00384 Molybdopterin oxidoreductase DMR_RS09685 PF01568 Molydopterin dinucleotide binding domain DMR_RS09705 PF00148 Nitrogenase component 1 type Oxidoreductase DMR_RS09710 PF00148 Nitrogenase component 1 type Oxidoreductase DMR_RS09715 PF00543 Nitrogen regulatory protein P-II DMR_RS09720 PF00543 Nitrogen regulatory protein P-II DMR_RS09725 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DMR_RS09730 PF17674 HHH domain DMR_RS09730 PF00575 S1 RNA binding domain DMR_RS09730 PF09371 Tex-like protein N-terminal domain DMR_RS09730 PF16921 Tex protein YqgF-like domain DMR_RS09755 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS09760 PF13439 Glycosyltransferase Family 4 DMR_RS09760 PF00534 Glycosyl transferases group 1 DMR_RS09765 PF00398 Ribosomal RNA adenine dimethylase DMR_RS09770 PF00216 Bacterial DNA-binding protein DMR_RS09780 PF01165 Ribosomal protein S21 DMR_RS09790 PF00488 MutS domain V DMR_RS09790 PF01713 Smr domain DMR_RS09795 PF08275 DNA primase catalytic core, N-terminal domain DMR_RS09795 PF01807 CHC2 zinc finger DMR_RS09795 PF10410 DnaB-helicase binding domain of primase DMR_RS09800 PF04545 Sigma-70, region 4 DMR_RS09800 PF04539 Sigma-70 region 3 DMR_RS09800 PF04542 Sigma-70 region 2 DMR_RS09800 PF04546 Sigma-70, non-essential region DMR_RS09800 PF03979 Sigma-70 factor, region 1.1 DMR_RS09800 PF00140 Sigma-70 factor, region 1.2 DMR_RS09805 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DMR_RS09810 PF03641 Possible lysine decarboxylase DMR_RS09815 PF10996 Beta-Casp domain DMR_RS09815 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DMR_RS09815 PF00753 Metallo-beta-lactamase superfamily DMR_RS09820 PF01176 Translation initiation factor 1A / IF-1 DMR_RS09825 PF02073 Thermophilic metalloprotease (M29) DMR_RS09835 PF01584 CheW-like domain DMR_RS09840 PF00270 DEAD/DEAH box helicase DMR_RS09840 PF02559 CarD-like/TRCF domain DMR_RS09840 PF17757 UvrB interaction domain DMR_RS09840 PF03461 TRCF domain DMR_RS09840 PF00271 Helicase conserved C-terminal domain DMR_RS09850 PF00639 PPIC-type PPIASE domain DMR_RS09850 PF09312 SurA N-terminal domain DMR_RS09860 PF02565 Recombination protein O C terminal DMR_RS09860 PF11967 Recombination protein O N terminal DMR_RS09865 PF02091 Glycyl-tRNA synthetase alpha subunit DMR_RS09870 PF02092 Glycyl-tRNA synthetase beta subunit DMR_RS09870 PF05746 DALR anticodon binding domain DMR_RS09875 PF01649 Ribosomal protein S20 DMR_RS09895 PF02769 AIR synthase related protein, C-terminal domain DMR_RS09895 PF00586 AIR synthase related protein, N-terminal domain DMR_RS09905 PF00664 ABC transporter transmembrane region DMR_RS09905 PF00005 ABC transporter DMR_RS09915 PF08502 LeuA allosteric (dimerisation) domain DMR_RS09915 PF00682 HMGL-like DMR_RS09925 PF04794 YdjC-like protein DMR_RS09930 PF00465 Iron-containing alcohol dehydrogenase DMR_RS09935 PF00072 Response regulator receiver domain DMR_RS09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS09935 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS09935 PF01627 Hpt domain DMR_RS09935 PF00672 HAMP domain DMR_RS09940 PF00679 Elongation factor G C-terminus DMR_RS09940 PF03144 Elongation factor Tu domain 2 DMR_RS09940 PF00009 Elongation factor Tu GTP binding domain DMR_RS09965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DMR_RS09965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DMR_RS09975 PF00977 Histidine biosynthesis protein DMR_RS09980 PF00117 Glutamine amidotransferase class-I DMR_RS09985 PF01370 NAD dependent epimerase/dehydratase family DMR_RS09990 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DMR_RS09995 PF02779 Transketolase, pyrimidine binding domain DMR_RS09995 PF02780 Transketolase, C-terminal domain DMR_RS09995 PF00456 Transketolase, thiamine diphosphate binding domain DMR_RS10000 PF02502 Ribose/Galactose Isomerase DMR_RS10015 PF04542 Sigma-70 region 2 DMR_RS10015 PF04545 Sigma-70, region 4 DMR_RS10015 PF00140 Sigma-70 factor, region 1.2 DMR_RS10020 PF00809 Pterin binding enzyme DMR_RS10020 PF02607 B12 binding domain DMR_RS10020 PF02574 Homocysteine S-methyltransferase DMR_RS10020 PF02310 B12 binding domain DMR_RS10020 PF02965 Vitamin B12 dependent methionine synthase, activation domain DMR_RS10025 PF00578 AhpC/TSA family DMR_RS10035 PF00156 Phosphoribosyl transferase domain DMR_RS10045 PF06745 KaiC DMR_RS10045 PF18073 Rubredoxin metal binding domain DMR_RS10055 PF00484 Carbonic anhydrase DMR_RS10060 PF03600 Citrate transporter DMR_RS10065 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DMR_RS10065 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DMR_RS10085 PF01070 FMN-dependent dehydrogenase DMR_RS10100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DMR_RS10100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DMR_RS10105 PF01624 MutS domain I DMR_RS10105 PF00488 MutS domain V DMR_RS10105 PF05188 MutS domain II DMR_RS10105 PF05192 MutS domain III DMR_RS10105 PF05190 MutS family domain IV DMR_RS10125 PF08459 UvrC Helix-hairpin-helix N-terminal DMR_RS10125 PF01541 GIY-YIG catalytic domain DMR_RS10125 PF02151 UvrB/uvrC motif DMR_RS10135 PF09962 Uncharacterized conserved protein (DUF2196) DMR_RS10150 PF13673 Acetyltransferase (GNAT) domain DMR_RS10150 PF00958 GMP synthase C terminal domain DMR_RS10150 PF13302 Acetyltransferase (GNAT) domain DMR_RS10150 PF00117 Glutamine amidotransferase class-I DMR_RS10150 PF03352 Methyladenine glycosylase DMR_RS10155 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DMR_RS10170 PF01556 DnaJ C terminal domain DMR_RS10170 PF00684 DnaJ central domain DMR_RS10170 PF00226 DnaJ domain DMR_RS10185 PF04055 Radical SAM superfamily DMR_RS10210 PF00005 ABC transporter DMR_RS10215 PF01032 FecCD transport family DMR_RS10225 PF02085 Class III cytochrome C family DMR_RS10230 PF00478 IMP dehydrogenase / GMP reductase domain DMR_RS10230 PF00571 CBS domain DMR_RS10240 PF10609 NUBPL iron-transfer P-loop NTPase DMR_RS10240 PF01883 Iron-sulfur cluster assembly protein DMR_RS10245 PF01066 CDP-alcohol phosphatidyltransferase DMR_RS10270 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DMR_RS10275 PF00814 Glycoprotease family DMR_RS10280 PF00085 Thioredoxin DMR_RS10285 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS10290 PF13525 Outer membrane lipoprotein DMR_RS10300 PF14492 Elongation Factor G, domain II DMR_RS10300 PF00679 Elongation factor G C-terminus DMR_RS10300 PF03764 Elongation factor G, domain IV DMR_RS10300 PF00009 Elongation factor Tu GTP binding domain DMR_RS10300 PF03144 Elongation factor Tu domain 2 DMR_RS10315 PF01467 Cytidylyltransferase-like DMR_RS10330 PF02416 mttA/Hcf106 family DMR_RS10350 PF02325 YGGT family DMR_RS10360 PF02594 Uncharacterised ACR, YggU family COG1872 DMR_RS10370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMR_RS10370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMR_RS10370 PF00205 Thiamine pyrophosphate enzyme, central domain DMR_RS10375 PF10369 Small subunit of acetolactate synthase DMR_RS10375 PF01842 ACT domain DMR_RS10380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DMR_RS10380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DMR_RS10410 PF00583 Acetyltransferase (GNAT) family DMR_RS10415 PF02492 CobW/HypB/UreG, nucleotide-binding domain DMR_RS10420 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DMR_RS10425 PF04474 Protein of unknown function (DUF554) DMR_RS10435 PF01702 Queuine tRNA-ribosyltransferase DMR_RS10440 PF13382 Adenine deaminase C-terminal domain DMR_RS10440 PF01979 Amidohydrolase family DMR_RS10460 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DMR_RS10465 PF00155 Aminotransferase class I and II DMR_RS10470 PF00589 Phage integrase family DMR_RS10470 PF02899 Phage integrase, N-terminal SAM-like domain DMR_RS10475 PF02272 DHHA1 domain DMR_RS10475 PF00571 CBS domain DMR_RS10475 PF01743 Poly A polymerase head domain DMR_RS10475 PF12627 Probable RNA and SrmB- binding site of polymerase A DMR_RS10475 PF01368 DHH family DMR_RS10480 PF00815 Histidinol dehydrogenase DMR_RS10485 PF01259 SAICAR synthetase DMR_RS10500 PF00156 Phosphoribosyl transferase domain DMR_RS10505 PF00248 Aldo/keto reductase family DMR_RS10515 PF01047 MarR family DMR_RS10540 PF00156 Phosphoribosyl transferase domain DMR_RS10545 PF02142 MGS-like domain DMR_RS10545 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DMR_RS10545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMR_RS10550 PF00133 tRNA synthetases class I (I, L, M and V) DMR_RS10550 PF08264 Anticodon-binding domain of tRNA DMR_RS10555 PF01252 Signal peptidase (SPase) II DMR_RS10585 PF00005 ABC transporter DMR_RS10590 PF02361 Cobalt transport protein DMR_RS10615 PF07676 WD40-like Beta Propeller Repeat DMR_RS10615 PF00326 Prolyl oligopeptidase family DMR_RS10620 PF02355 Protein export membrane protein DMR_RS10620 PF07549 SecD/SecF GG Motif DMR_RS10625 PF02699 Preprotein translocase subunit DMR_RS10635 PF00403 Heavy-metal-associated domain DMR_RS10640 PF00977 Histidine biosynthesis protein DMR_RS10650 PF00475 Imidazoleglycerol-phosphate dehydratase DMR_RS10655 PF02416 mttA/Hcf106 family DMR_RS10660 PF00958 GMP synthase C terminal domain DMR_RS10660 PF00117 Glutamine amidotransferase class-I DMR_RS10660 PF02540 NAD synthase DMR_RS10665 PF00478 IMP dehydrogenase / GMP reductase domain DMR_RS10665 PF00571 CBS domain DMR_RS10670 PF00005 ABC transporter DMR_RS10675 PF00005 ABC transporter DMR_RS10675 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMR_RS10680 PF11862 Domain of unknown function (DUF3382) DMR_RS10680 PF02653 Branched-chain amino acid transport system / permease component DMR_RS10685 PF02653 Branched-chain amino acid transport system / permease component DMR_RS10690 PF13458 Periplasmic binding protein DMR_RS10700 PF01578 Cytochrome C assembly protein DMR_RS10710 PF00005 ABC transporter DMR_RS10715 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DMR_RS10715 PF01578 Cytochrome C assembly protein DMR_RS10720 PF03100 CcmE DMR_RS10725 PF01595 Cyclin M transmembrane N-terminal domain DMR_RS10725 PF00571 CBS domain DMR_RS10735 PF01467 Cytidylyltransferase-like DMR_RS10740 PF00171 Aldehyde dehydrogenase family DMR_RS10755 PF02154 Flagellar motor switch protein FliM DMR_RS10755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DMR_RS10780 PF00158 Sigma-54 interaction domain DMR_RS10780 PF00989 PAS fold DMR_RS10780 PF02954 Bacterial regulatory protein, Fis family DMR_RS10785 PF00202 Aminotransferase class-III DMR_RS10790 PF13458 Periplasmic binding protein DMR_RS10795 PF02653 Branched-chain amino acid transport system / permease component DMR_RS10805 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMR_RS10805 PF00005 ABC transporter DMR_RS10810 PF00005 ABC transporter DMR_RS10820 PF00571 CBS domain DMR_RS10865 PF01584 CheW-like domain DMR_RS10885 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DMR_RS10885 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DMR_RS10890 PF00342 Phosphoglucose isomerase DMR_RS10895 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DMR_RS10900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DMR_RS10900 PF02806 Alpha amylase, C-terminal all-beta domain DMR_RS10900 PF00128 Alpha amylase, catalytic domain DMR_RS10905 PF00534 Glycosyl transferases group 1 DMR_RS10905 PF08323 Starch synthase catalytic domain DMR_RS10920 PF01300 Telomere recombination DMR_RS10935 PF00005 ABC transporter DMR_RS10950 PF02405 Permease MlaE DMR_RS10965 PF04333 MlaA lipoprotein DMR_RS10970 PF14525 AraC-binding-like domain DMR_RS10970 PF12833 Helix-turn-helix domain DMR_RS10990 PF03734 L,D-transpeptidase catalytic domain DMR_RS10990 PF01476 LysM domain DMR_RS10990 PF17969 L,D-transpeptidase C-terminal domain DMR_RS10995 PF00881 Nitroreductase family DMR_RS11000 PF00877 NlpC/P60 family DMR_RS11005 PF00989 PAS fold DMR_RS11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS11005 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS11010 PF06965 Na+/H+ antiporter 1 DMR_RS11010 PF13462 Thioredoxin DMR_RS11030 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS11030 PF00072 Response regulator receiver domain DMR_RS11030 PF09308 LuxQ, periplasmic DMR_RS11050 PF02542 YgbB family DMR_RS11050 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DMR_RS11055 PF09190 DALR domain DMR_RS11055 PF01406 tRNA synthetases class I (C) catalytic domain DMR_RS11065 PF03372 Endonuclease/Exonuclease/phosphatase family DMR_RS11070 PF00072 Response regulator receiver domain DMR_RS11080 PF01812 5-formyltetrahydrofolate cyclo-ligase family DMR_RS11085 PF02578 Multi-copper polyphenol oxidoreductase laccase DMR_RS11090 PF00072 Response regulator receiver domain DMR_RS11095 PF01370 NAD dependent epimerase/dehydratase family DMR_RS11095 PF08338 Domain of unknown function (DUF1731) DMR_RS11105 PF02590 Predicted SPOUT methyltransferase DMR_RS11115 PF02527 rRNA small subunit methyltransferase G DMR_RS11120 PF00698 Acyl transferase domain DMR_RS11125 PF03485 Arginyl tRNA synthetase N terminal domain DMR_RS11125 PF00750 tRNA synthetases class I (R) DMR_RS11125 PF05746 DALR anticodon binding domain DMR_RS11135 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) DMR_RS11140 PF00633 Helix-hairpin-helix motif DMR_RS11140 PF00730 HhH-GPD superfamily base excision DNA repair protein DMR_RS11170 PF00849 RNA pseudouridylate synthase DMR_RS11170 PF01479 S4 domain DMR_RS11185 PF01458 Uncharacterized protein family (UPF0051) DMR_RS11190 PF00005 ABC transporter DMR_RS11195 PF00072 Response regulator receiver domain DMR_RS11200 PF01757 Acyltransferase family DMR_RS11220 PF00196 Bacterial regulatory proteins, luxR family DMR_RS11220 PF00072 Response regulator receiver domain DMR_RS11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS11225 PF07730 Histidine kinase DMR_RS11240 PF03190 Protein of unknown function, DUF255 DMR_RS11250 PF00708 Acylphosphatase DMR_RS11250 PF17788 HypF Kae1-like domain DMR_RS11250 PF07503 HypF finger DMR_RS11250 PF01300 Telomere recombination DMR_RS11275 PF01479 S4 domain DMR_RS11275 PF00849 RNA pseudouridylate synthase DMR_RS11280 PF00107 Zinc-binding dehydrogenase DMR_RS11280 PF08240 Alcohol dehydrogenase GroES-like domain DMR_RS11285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DMR_RS11285 PF01653 NAD-dependent DNA ligase adenylation domain DMR_RS11285 PF12826 Helix-hairpin-helix motif DMR_RS11285 PF00533 BRCA1 C Terminus (BRCT) domain DMR_RS11285 PF03120 NAD-dependent DNA ligase OB-fold domain DMR_RS11295 PF02080 TrkA-C domain DMR_RS11295 PF06826 Predicted Permease Membrane Region DMR_RS11300 PF02151 UvrB/uvrC motif DMR_RS11300 PF00271 Helicase conserved C-terminal domain DMR_RS11300 PF12344 Ultra-violet resistance protein B DMR_RS11300 PF04851 Type III restriction enzyme, res subunit DMR_RS11300 PF17757 UvrB interaction domain DMR_RS11310 PF03641 Possible lysine decarboxylase DMR_RS11320 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DMR_RS11325 PF02861 Clp amino terminal domain, pathogenicity island component DMR_RS11325 PF10431 C-terminal, D2-small domain, of ClpB protein DMR_RS11325 PF17871 AAA lid domain DMR_RS11325 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS11325 PF07724 AAA domain (Cdc48 subfamily) DMR_RS11330 PF02617 ATP-dependent Clp protease adaptor protein ClpS DMR_RS11340 PF00072 Response regulator receiver domain DMR_RS11340 PF01339 CheB methylesterase DMR_RS11345 PF03705 CheR methyltransferase, all-alpha domain DMR_RS11345 PF01739 CheR methyltransferase, SAM binding domain DMR_RS11350 PF01584 CheW-like domain DMR_RS11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS11355 PF01584 CheW-like domain DMR_RS11355 PF01627 Hpt domain DMR_RS11355 PF09078 CheY binding DMR_RS11355 PF02895 Signal transducing histidine kinase, homodimeric domain DMR_RS11370 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS11370 PF00989 PAS fold DMR_RS11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS11375 PF03975 CheD chemotactic sensory transduction DMR_RS11380 PF08668 HDOD domain DMR_RS11385 PF01171 PP-loop family DMR_RS11395 PF01311 Bacterial export proteins, family 1 DMR_RS11400 PF01312 FlhB HrpN YscU SpaS Family DMR_RS11405 PF00771 FHIPEP family DMR_RS11410 PF00448 SRP54-type protein, GTPase domain DMR_RS11415 PF10609 NUBPL iron-transfer P-loop NTPase DMR_RS11420 PF04542 Sigma-70 region 2 DMR_RS11420 PF04539 Sigma-70 region 3 DMR_RS11420 PF04545 Sigma-70, region 4 DMR_RS11425 PF00072 Response regulator receiver domain DMR_RS11450 PF01580 FtsK/SpoIIIE family DMR_RS11450 PF09397 Ftsk gamma domain DMR_RS11450 PF17854 FtsK alpha domain DMR_RS11450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DMR_RS11455 PF01132 Elongation factor P (EF-P) OB domain DMR_RS11455 PF08207 Elongation factor P (EF-P) KOW-like domain DMR_RS11455 PF09285 Elongation factor P, C-terminal DMR_RS11460 PF01220 Dehydroquinase class II DMR_RS11465 PF01926 50S ribosome-binding GTPase DMR_RS11475 PF02673 Bacitracin resistance protein BacA DMR_RS11535 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMR_RS11555 PF13186 Iron-sulfur cluster-binding domain DMR_RS11555 PF04055 Radical SAM superfamily DMR_RS11560 PF13614 AAA domain DMR_RS11580 PF13419 Haloacid dehalogenase-like hydrolase DMR_RS11610 PF03009 Glycerophosphoryl diester phosphodiesterase family DMR_RS11615 PF02779 Transketolase, pyrimidine binding domain DMR_RS11615 PF02780 Transketolase, C-terminal domain DMR_RS11615 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DMR_RS11620 PF00881 Nitroreductase family DMR_RS11625 PF00348 Polyprenyl synthetase DMR_RS11630 PF02609 Exonuclease VII small subunit DMR_RS11635 PF13742 OB-fold nucleic acid binding domain DMR_RS11635 PF02601 Exonuclease VII, large subunit DMR_RS11640 PF03129 Anticodon binding domain DMR_RS11640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMR_RS11640 PF04073 Aminoacyl-tRNA editing domain DMR_RS11645 PF04551 GcpE protein DMR_RS11665 PF00158 Sigma-54 interaction domain DMR_RS11665 PF00072 Response regulator receiver domain DMR_RS11665 PF02954 Bacterial regulatory protein, Fis family DMR_RS11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS11670 PF00989 PAS fold DMR_RS11670 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS11680 PF13247 4Fe-4S dicluster domain DMR_RS11685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS11685 PF00384 Molybdopterin oxidoreductase DMR_RS11685 PF01568 Molydopterin dinucleotide binding domain DMR_RS11690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS11690 PF00384 Molybdopterin oxidoreductase DMR_RS11690 PF01568 Molydopterin dinucleotide binding domain DMR_RS11700 PF04055 Radical SAM superfamily DMR_RS11700 PF06463 Molybdenum Cofactor Synthesis C DMR_RS11705 PF12804 MobA-like NTP transferase domain DMR_RS11710 PF02634 FdhD/NarQ family DMR_RS11720 PF02080 TrkA-C domain DMR_RS11720 PF06826 Predicted Permease Membrane Region DMR_RS11725 PF01435 Peptidase family M48 DMR_RS11740 PF02348 Cytidylyltransferase DMR_RS11745 PF02585 GlcNAc-PI de-N-acetylase DMR_RS11750 PF13186 Iron-sulfur cluster-binding domain DMR_RS11750 PF04055 Radical SAM superfamily DMR_RS11755 PF03102 NeuB family DMR_RS11755 PF08666 SAF domain DMR_RS11765 PF07836 DmpG-like communication domain DMR_RS11765 PF00682 HMGL-like DMR_RS11785 PF13419 Haloacid dehalogenase-like hydrolase DMR_RS11805 PF00589 Phage integrase family DMR_RS11805 PF02899 Phage integrase, N-terminal SAM-like domain DMR_RS11975 PF01734 Patatin-like phospholipase DMR_RS12030 PF00772 DnaB-like helicase N terminal domain DMR_RS12030 PF03796 DnaB-like helicase C terminal domain DMR_RS12045 PF09856 Predicted transcriptional regulator (DUF2083) DMR_RS12045 PF01381 Helix-turn-helix DMR_RS12045 PF06114 IrrE N-terminal-like domain DMR_RS12055 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DMR_RS12065 PF08543 Phosphomethylpyrimidine kinase DMR_RS12075 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DMR_RS12075 PF13538 UvrD-like helicase C-terminal domain DMR_RS12075 PF14490 Helix-hairpin-helix containing domain DMR_RS12080 PF13662 Toprim domain DMR_RS12080 PF02132 RecR protein DMR_RS12085 PF02575 YbaB/EbfC DNA-binding family DMR_RS12090 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DMR_RS12090 PF12170 DNA polymerase III tau subunit V interacting with alpha DMR_RS12090 PF12169 DNA polymerase III subunits gamma and tau domain III DMR_RS12095 PF01063 Amino-transferase class IV DMR_RS12110 PF01966 HD domain DMR_RS12115 PF12633 Adenylate cyclase NT domain DMR_RS12115 PF01295 Adenylate cyclase, class-I DMR_RS12130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DMR_RS12130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DMR_RS12130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DMR_RS12130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DMR_RS12135 PF02163 Peptidase family M50 DMR_RS12145 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DMR_RS12145 PF01676 Metalloenzyme superfamily DMR_RS12155 PF00501 AMP-binding enzyme DMR_RS12155 PF14535 AMP-binding enzyme C-terminal domain DMR_RS12165 PF01139 tRNA-splicing ligase RtcB DMR_RS12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS12170 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS12170 PF01627 Hpt domain DMR_RS12170 PF00072 Response regulator receiver domain DMR_RS12175 PF00588 SpoU rRNA Methylase family DMR_RS12175 PF12105 SpoU, rRNA methylase, C-terminal DMR_RS12180 PF02548 Ketopantoate hydroxymethyltransferase DMR_RS12190 PF01790 Prolipoprotein diacylglyceryl transferase DMR_RS12205 PF00158 Sigma-54 interaction domain DMR_RS12205 PF02954 Bacterial regulatory protein, Fis family DMR_RS12205 PF00072 Response regulator receiver domain DMR_RS12230 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DMR_RS12235 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS12235 PF00072 Response regulator receiver domain DMR_RS12240 PF01915 Glycosyl hydrolase family 3 C-terminal domain DMR_RS12240 PF00933 Glycosyl hydrolase family 3 N terminal domain DMR_RS12245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS12245 PF00672 HAMP domain DMR_RS12245 PF17202 Single cache domain 3 DMR_RS12260 PF07568 Histidine kinase DMR_RS12260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS12260 PF12282 Signal transduction histidine kinase DMR_RS12270 PF17764 3′ DNA-binding domain (3′BD) DMR_RS12270 PF18074 Primosomal protein N C-terminal domain DMR_RS12270 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DMR_RS12270 PF00270 DEAD/DEAH box helicase DMR_RS12275 PF00483 Nucleotidyl transferase DMR_RS12280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DMR_RS12280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DMR_RS12280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DMR_RS12280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DMR_RS12290 PF02457 DisA bacterial checkpoint controller nucleotide-binding DMR_RS12295 PF00809 Pterin binding enzyme DMR_RS12300 PF06480 FtsH Extracellular DMR_RS12300 PF17862 AAA+ lid domain DMR_RS12300 PF01434 Peptidase family M41 DMR_RS12300 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS12305 PF00072 Response regulator receiver domain DMR_RS12310 PF00072 Response regulator receiver domain DMR_RS12315 PF13545 Crp-like helix-turn-helix domain DMR_RS12315 PF00027 Cyclic nucleotide-binding domain DMR_RS12320 PF03063 Prismane/CO dehydrogenase family DMR_RS12330 PF01368 DHH family DMR_RS12330 PF02833 DHHA2 domain DMR_RS12345 PF03830 PTS system sorbose subfamily IIB component DMR_RS12350 PF03610 PTS system fructose IIA component DMR_RS12350 PF03830 PTS system sorbose subfamily IIB component DMR_RS12355 PF03668 P-loop ATPase protein family DMR_RS12360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DMR_RS12365 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DMR_RS12365 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DMR_RS12370 PF00309 Sigma-54 factor, Activator interacting domain (AID) DMR_RS12370 PF04963 Sigma-54 factor, core binding domain DMR_RS12370 PF04552 Sigma-54, DNA binding domain DMR_RS12380 PF00117 Glutamine amidotransferase class-I DMR_RS12380 PF06418 CTP synthase N-terminus DMR_RS12385 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DMR_RS12385 PF02769 AIR synthase related protein, C-terminal domain DMR_RS12385 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DMR_RS12390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMR_RS12400 PF04055 Radical SAM superfamily DMR_RS12400 PF02310 B12 binding domain DMR_RS12405 PF03601 Conserved hypothetical protein 698 DMR_RS12425 PF01565 FAD binding domain DMR_RS12425 PF02913 FAD linked oxidases, C-terminal domain DMR_RS12430 PF01048 Phosphorylase superfamily DMR_RS12435 PF00156 Phosphoribosyl transferase domain DMR_RS12440 PF01979 Amidohydrolase family DMR_RS12450 PF07687 Peptidase dimerisation domain DMR_RS12450 PF01546 Peptidase family M20/M25/M40 DMR_RS12455 PF01209 ubiE/COQ5 methyltransferase family DMR_RS12460 PF01134 Glucose inhibited division protein A DMR_RS12460 PF13932 GidA associated domain DMR_RS12470 PF03471 Transporter associated domain DMR_RS12470 PF00571 CBS domain DMR_RS12475 PF00795 Carbon-nitrogen hydrolase DMR_RS12480 PF03462 PCRF domain DMR_RS12480 PF00472 RF-1 domain DMR_RS12485 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS12485 PF17158 Membrane-associated sensor, integral membrane domain DMR_RS12490 PF10609 NUBPL iron-transfer P-loop NTPase DMR_RS12495 PF00216 Bacterial DNA-binding protein DMR_RS12515 PF00535 Glycosyl transferase family 2 DMR_RS12525 PF00005 ABC transporter DMR_RS12545 PF04324 BFD-like [2Fe-2S] binding domain DMR_RS12545 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS12545 PF18267 Rubredoxin NAD+ reductase C-terminal domain DMR_RS12545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DMR_RS12550 PF01894 Uncharacterised protein family UPF0047 DMR_RS12560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMR_RS12560 PF00205 Thiamine pyrophosphate enzyme, central domain DMR_RS12560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMR_RS12565 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS12565 PF00072 Response regulator receiver domain DMR_RS12565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS12565 PF09308 LuxQ, periplasmic DMR_RS12635 PF01361 Tautomerase enzyme DMR_RS12640 PF02525 Flavodoxin-like fold DMR_RS12645 PF13443 Cro/C1-type HTH DNA-binding domain DMR_RS12670 PF00575 S1 RNA binding domain DMR_RS12675 PF12848 ABC transporter DMR_RS12675 PF00005 ABC transporter DMR_RS12680 PF02743 Cache domain DMR_RS12680 PF00672 HAMP domain DMR_RS12680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS12685 PF01590 GAF domain DMR_RS12685 PF00158 Sigma-54 interaction domain DMR_RS12685 PF02954 Bacterial regulatory protein, Fis family DMR_RS12690 PF00206 Lyase DMR_RS12690 PF14698 Argininosuccinate lyase C-terminal DMR_RS12695 PF00764 Arginosuccinate synthase DMR_RS12700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DMR_RS12700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DMR_RS12735 PF06965 Na+/H+ antiporter 1 DMR_RS12740 PF01207 Dihydrouridine synthase (Dus) DMR_RS12745 PF02401 LytB protein DMR_RS12750 PF01584 CheW-like domain DMR_RS12750 PF00072 Response regulator receiver domain DMR_RS12775 PF01590 GAF domain DMR_RS12775 PF00158 Sigma-54 interaction domain DMR_RS12775 PF02954 Bacterial regulatory protein, Fis family DMR_RS12790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS12790 PF00384 Molybdopterin oxidoreductase DMR_RS12790 PF01568 Molydopterin dinucleotide binding domain DMR_RS12800 PF01841 Transglutaminase-like superfamily DMR_RS12815 PF02310 B12 binding domain DMR_RS12815 PF04055 Radical SAM superfamily DMR_RS12825 PF16363 GDP-mannose 4,6 dehydratase DMR_RS12830 PF16363 GDP-mannose 4,6 dehydratase DMR_RS12840 PF00950 ABC 3 transport family DMR_RS12845 PF00005 ABC transporter DMR_RS12850 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DMR_RS12850 PF01297 Zinc-uptake complex component A periplasmic DMR_RS12870 PF00701 Dihydrodipicolinate synthetase family DMR_RS12875 PF00005 ABC transporter DMR_RS12875 PF02361 Cobalt transport protein DMR_RS12885 PF01596 O-methyltransferase DMR_RS12895 PF01274 Malate synthase DMR_RS12900 PF00881 Nitroreductase family DMR_RS12905 PF01479 S4 domain DMR_RS12905 PF01728 FtsJ-like methyltransferase DMR_RS12910 PF00072 Response regulator receiver domain DMR_RS12910 PF00158 Sigma-54 interaction domain DMR_RS12910 PF02954 Bacterial regulatory protein, Fis family DMR_RS12920 PF00291 Pyridoxal-phosphate dependent enzyme DMR_RS12930 PF14535 AMP-binding enzyme C-terminal domain DMR_RS12930 PF00501 AMP-binding enzyme DMR_RS12935 PF00772 DnaB-like helicase N terminal domain DMR_RS12935 PF03796 DnaB-like helicase C terminal domain DMR_RS12940 PF01281 Ribosomal protein L9, N-terminal domain DMR_RS12940 PF03948 Ribosomal protein L9, C-terminal domain DMR_RS12945 PF01084 Ribosomal protein S18 DMR_RS12950 PF01250 Ribosomal protein S6 DMR_RS12955 PF02743 Cache domain DMR_RS12955 PF00672 HAMP domain DMR_RS12955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS12965 PF00072 Response regulator receiver domain DMR_RS12970 PF01145 SPFH domain / Band 7 family DMR_RS12975 PF01145 SPFH domain / Band 7 family DMR_RS12975 PF12221 Bacterial membrane protein N terminal DMR_RS12980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DMR_RS12980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DMR_RS12980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DMR_RS12980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DMR_RS12995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMR_RS13000 PF12704 MacB-like periplasmic core domain DMR_RS13000 PF00005 ABC transporter DMR_RS13000 PF02687 FtsX-like permease family DMR_RS13005 PF00005 ABC transporter DMR_RS13005 PF12704 MacB-like periplasmic core domain DMR_RS13005 PF02687 FtsX-like permease family DMR_RS13010 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS13010 PF13007 Transposase C of IS166 homeodomain DMR_RS13010 PF13817 IS66 C-terminal element DMR_RS13010 PF03050 Transposase IS66 family DMR_RS13015 PF05717 IS66 Orf2 like protein DMR_RS13025 PF01584 CheW-like domain DMR_RS13045 PF01609 Transposase DDE domain DMR_RS13050 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS13055 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS13055 PF00989 PAS fold DMR_RS13055 PF00672 HAMP domain DMR_RS13055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS13055 PF18698 Histidine kinase sensor domain DMR_RS13065 PF00072 Response regulator receiver domain DMR_RS13065 PF02954 Bacterial regulatory protein, Fis family DMR_RS13065 PF00158 Sigma-54 interaction domain DMR_RS13070 PF08668 HDOD domain DMR_RS13115 PF00580 UvrD/REP helicase N-terminal domain DMR_RS13115 PF13361 UvrD-like helicase C-terminal domain DMR_RS13125 PF03050 Transposase IS66 family DMR_RS13125 PF13817 IS66 C-terminal element DMR_RS13125 PF13007 Transposase C of IS166 homeodomain DMR_RS13125 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS13130 PF05717 IS66 Orf2 like protein DMR_RS13140 PF13229 Right handed beta helix region DMR_RS13140 PF12708 Pectate lyase superfamily protein DMR_RS13140 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DMR_RS13145 PF00672 HAMP domain DMR_RS13145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS13145 PF00672 HAMP domain DMR_RS13145 PF02743 Cache domain DMR_RS13145 PF02743 Cache domain DMR_RS13145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS13160 PF04542 Sigma-70 region 2 DMR_RS13160 PF08281 Sigma-70, region 4 DMR_RS13165 PF01202 Shikimate kinase DMR_RS13175 PF13183 4Fe-4S dicluster domain DMR_RS13175 PF02589 LUD domain DMR_RS13175 PF11870 Domain of unknown function (DUF3390) DMR_RS13180 PF02754 Cysteine-rich domain DMR_RS13185 PF00285 Citrate synthase, C-terminal domain DMR_RS13190 PF12794 Mechanosensitive ion channel inner membrane domain 1 DMR_RS13190 PF00924 Mechanosensitive ion channel DMR_RS13190 PF12795 Mechanosensitive ion channel porin domain DMR_RS13210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DMR_RS13210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DMR_RS13210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DMR_RS13215 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DMR_RS13220 PF01648 4'-phosphopantetheinyl transferase superfamily DMR_RS13225 PF07687 Peptidase dimerisation domain DMR_RS13225 PF01546 Peptidase family M20/M25/M40 DMR_RS13230 PF00248 Aldo/keto reductase family DMR_RS13235 PF12801 4Fe-4S binding domain DMR_RS13260 PF00593 TonB dependent receptor DMR_RS13260 PF07715 TonB-dependent Receptor Plug Domain DMR_RS13270 PF12558 ATP-binding cassette cobalt transporter DMR_RS13270 PF00005 ABC transporter DMR_RS13290 PF08241 Methyltransferase domain DMR_RS13295 PF04198 Putative sugar-binding domain DMR_RS13300 PF01266 FAD dependent oxidoreductase DMR_RS13300 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DMR_RS13305 PF00230 Major intrinsic protein DMR_RS13310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DMR_RS13310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DMR_RS13320 PF00465 Iron-containing alcohol dehydrogenase DMR_RS13330 PF00146 NADH dehydrogenase DMR_RS13335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMR_RS13340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMR_RS13340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DMR_RS13340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMR_RS13345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMR_RS13350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DMR_RS13355 PF00361 Proton-conducting membrane transporter DMR_RS13360 PF00361 Proton-conducting membrane transporter DMR_RS13360 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DMR_RS13365 PF00361 Proton-conducting membrane transporter DMR_RS13375 PF00361 Proton-conducting membrane transporter DMR_RS13380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DMR_RS13385 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DMR_RS13405 PF07690 Major Facilitator Superfamily DMR_RS13415 PF00155 Aminotransferase class I and II DMR_RS13435 PF00072 Response regulator receiver domain DMR_RS13435 PF01584 CheW-like domain DMR_RS13440 PF00999 Sodium/hydrogen exchanger family DMR_RS13440 PF02254 TrkA-N domain DMR_RS13455 PF00999 Sodium/hydrogen exchanger family DMR_RS13455 PF02254 TrkA-N domain DMR_RS13460 PF02423 Ornithine cyclodeaminase/mu-crystallin family DMR_RS13465 PF00873 AcrB/AcrD/AcrF family DMR_RS13470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMR_RS13480 PF00924 Mechanosensitive ion channel DMR_RS13480 PF12794 Mechanosensitive ion channel inner membrane domain 1 DMR_RS13480 PF12795 Mechanosensitive ion channel porin domain DMR_RS13490 PF00391 PEP-utilising enzyme, mobile domain DMR_RS13490 PF02896 PEP-utilising enzyme, TIM barrel domain DMR_RS13490 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DMR_RS13495 PF00682 HMGL-like DMR_RS13495 PF00364 Biotin-requiring enzyme DMR_RS13495 PF02436 Conserved carboxylase domain DMR_RS13495 PF00289 Biotin carboxylase, N-terminal domain DMR_RS13495 PF02785 Biotin carboxylase C-terminal domain DMR_RS13495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMR_RS13500 PF03099 Biotin/lipoate A/B protein ligase family DMR_RS13500 PF02237 Biotin protein ligase C terminal domain DMR_RS13505 PF01743 Poly A polymerase head domain DMR_RS13505 PF12627 Probable RNA and SrmB- binding site of polymerase A DMR_RS13505 PF01966 HD domain DMR_RS13520 PF02190 ATP-dependent protease La (LON) substrate-binding domain DMR_RS13520 PF05362 Lon protease (S16) C-terminal proteolytic domain DMR_RS13520 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS13525 PF07724 AAA domain (Cdc48 subfamily) DMR_RS13525 PF10431 C-terminal, D2-small domain, of ClpB protein DMR_RS13525 PF06689 ClpX C4-type zinc finger DMR_RS13530 PF00574 Clp protease DMR_RS13535 PF05698 Bacterial trigger factor protein (TF) C-terminus DMR_RS13535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMR_RS13535 PF05697 Bacterial trigger factor protein (TF) DMR_RS13550 PF01968 Hydantoinase/oxoprolinase DMR_RS13550 PF05378 Hydantoinase/oxoprolinase N-terminal region DMR_RS13555 PF00180 Isocitrate/isopropylmalate dehydrogenase DMR_RS13570 PF06725 3D domain DMR_RS13570 PF01476 LysM domain DMR_RS13575 PF02397 Bacterial sugar transferase DMR_RS13580 PF13660 Domain of unknown function (DUF4147) DMR_RS13580 PF05161 MOFRL family DMR_RS13585 PF00293 NUDIX domain DMR_RS13585 PF09297 NADH pyrophosphatase zinc ribbon domain DMR_RS13595 PF01654 Cytochrome bd terminal oxidase subunit I DMR_RS13600 PF02322 Cytochrome bd terminal oxidase subunit II DMR_RS13620 PF01966 HD domain DMR_RS13620 PF00072 Response regulator receiver domain DMR_RS13630 PF00263 Bacterial type II and III secretion system protein DMR_RS13630 PF03958 Bacterial type II/III secretion system short domain DMR_RS13635 PF00437 Type II/IV secretion system protein DMR_RS13640 PF00440 Bacterial regulatory proteins, tetR family DMR_RS13650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMR_RS13655 PF00873 AcrB/AcrD/AcrF family DMR_RS13660 PF01047 MarR family DMR_RS13675 PF00482 Type II secretion system (T2SS), protein F DMR_RS13680 PF08334 Type II secretion system (T2SS), protein G DMR_RS13680 PF07963 Prokaryotic N-terminal methylation motif DMR_RS13685 PF12019 Type II transport protein GspH DMR_RS13685 PF07963 Prokaryotic N-terminal methylation motif DMR_RS13725 PF01761 3-dehydroquinate synthase DMR_RS13730 PF00588 SpoU rRNA Methylase family DMR_RS13750 PF16363 GDP-mannose 4,6 dehydratase DMR_RS13755 PF04321 RmlD substrate binding domain DMR_RS13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS13760 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS13765 PF00535 Glycosyl transferase family 2 DMR_RS13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS13770 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS13770 PF01627 Hpt domain DMR_RS13770 PF00072 Response regulator receiver domain DMR_RS13770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS13770 PF00672 HAMP domain DMR_RS13775 PF01184 GPR1/FUN34/yaaH family DMR_RS13780 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS13790 PF00072 Response regulator receiver domain DMR_RS13800 PF02895 Signal transducing histidine kinase, homodimeric domain DMR_RS13800 PF01627 Hpt domain DMR_RS13800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS13800 PF01584 CheW-like domain DMR_RS13815 PF04168 A predicted alpha-helical domain with a conserved ER motif. DMR_RS13815 PF14403 Circularly permuted ATP-grasp type 2 DMR_RS13820 PF14403 Circularly permuted ATP-grasp type 2 DMR_RS13830 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS13830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS13835 PF01047 MarR family DMR_RS13840 PF00403 Heavy-metal-associated domain DMR_RS13845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DMR_RS13845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DMR_RS13855 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS13860 PF01258 Prokaryotic dksA/traR C4-type zinc finger DMR_RS13870 PF02562 PhoH-like protein DMR_RS13875 PF01966 HD domain DMR_RS13875 PF07697 7TM-HD extracellular DMR_RS13875 PF07698 7TM receptor with intracellular HD hydrolase DMR_RS13880 PF02130 Uncharacterized protein family UPF0054 DMR_RS13895 PF01871 AMMECR1 DMR_RS13910 PF03741 Integral membrane protein TerC family DMR_RS13915 PF00817 impB/mucB/samB family DMR_RS13915 PF13438 Domain of unknown function (DUF4113) DMR_RS13915 PF11799 impB/mucB/samB family C-terminal domain DMR_RS13920 PF00717 Peptidase S24-like DMR_RS13925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS13925 PF02743 Cache domain DMR_RS13925 PF00672 HAMP domain DMR_RS13940 PF01676 Metalloenzyme superfamily DMR_RS13940 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DMR_RS13945 PF03447 Homoserine dehydrogenase, NAD binding domain DMR_RS13945 PF00742 Homoserine dehydrogenase DMR_RS13945 PF01842 ACT domain DMR_RS13950 PF00155 Aminotransferase class I and II DMR_RS13965 PF01695 IstB-like ATP binding protein DMR_RS13970 PF00665 Integrase core domain DMR_RS13975 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS13975 PF00072 Response regulator receiver domain DMR_RS13975 PF09308 LuxQ, periplasmic DMR_RS13975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS13985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS13985 PF00672 HAMP domain DMR_RS13985 PF12729 Four helix bundle sensory module for signal transduction DMR_RS13995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS13995 PF01627 Hpt domain DMR_RS13995 PF00072 Response regulator receiver domain DMR_RS13995 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS13995 PF00672 HAMP domain DMR_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS14005 PF01695 IstB-like ATP binding protein DMR_RS14020 PF00672 HAMP domain DMR_RS14020 PF02743 Cache domain DMR_RS14020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS14040 PF12951 Passenger-associated-transport-repeat DMR_RS14040 PF12951 Passenger-associated-transport-repeat DMR_RS14045 PF00196 Bacterial regulatory proteins, luxR family DMR_RS14045 PF00072 Response regulator receiver domain DMR_RS14050 PF07730 Histidine kinase DMR_RS14050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS14055 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DMR_RS14055 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DMR_RS14085 PF01555 DNA methylase DMR_RS14095 PF17820 PDZ domain DMR_RS14095 PF13180 PDZ domain DMR_RS14100 PF08544 GHMP kinases C terminal DMR_RS14100 PF00288 GHMP kinases N terminal domain DMR_RS14110 PF14572 Phosphoribosyl synthetase-associated domain DMR_RS14110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DMR_RS14115 PF01386 Ribosomal L25p family DMR_RS14115 PF14693 Ribosomal protein TL5, C-terminal domain DMR_RS14120 PF01195 Peptidyl-tRNA hydrolase DMR_RS14130 PF07498 Rho termination factor, N-terminal domain DMR_RS14130 PF07497 Rho termination factor, RNA-binding domain DMR_RS14130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMR_RS14135 PF13181 Tetratricopeptide repeat DMR_RS14135 PF01435 Peptidase family M48 DMR_RS14150 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DMR_RS14150 PF07703 Alpha-2-macroglobulin bait region domain DMR_RS14150 PF00207 Alpha-2-macroglobulin family DMR_RS14150 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DMR_RS14150 PF01835 MG2 domain DMR_RS14150 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DMR_RS14150 PF17962 Bacterial macroglobulin domain 6 DMR_RS14150 PF07678 A-macroglobulin TED domain DMR_RS14150 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DMR_RS14155 PF00437 Type II/IV secretion system protein DMR_RS14180 PF01253 Translation initiation factor SUI1 DMR_RS14200 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DMR_RS14205 PF12706 Beta-lactamase superfamily domain DMR_RS14220 PF08447 PAS fold DMR_RS14220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS14220 PF13426 PAS domain DMR_RS14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS14225 PF00672 HAMP domain DMR_RS14225 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS14225 PF00072 Response regulator receiver domain DMR_RS14225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS14225 PF01627 Hpt domain DMR_RS14230 PF00072 Response regulator receiver domain DMR_RS14235 PF00072 Response regulator receiver domain DMR_RS14240 PF00939 Sodium:sulfate symporter transmembrane region DMR_RS14245 PF02910 Fumarate reductase flavoprotein C-term DMR_RS14245 PF00890 FAD binding domain DMR_RS14250 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit DMR_RS14250 PF13187 4Fe-4S dicluster domain DMR_RS14255 PF13545 Crp-like helix-turn-helix domain DMR_RS14255 PF00027 Cyclic nucleotide-binding domain DMR_RS14260 PF12800 4Fe-4S binding domain DMR_RS14260 PF13247 4Fe-4S dicluster domain DMR_RS14265 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DMR_RS14265 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DMR_RS14275 PF00012 Hsp70 protein DMR_RS14290 PF00440 Bacterial regulatory proteins, tetR family DMR_RS14295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMR_RS14300 PF00873 AcrB/AcrD/AcrF family DMR_RS14310 PF05717 IS66 Orf2 like protein DMR_RS14315 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS14315 PF13007 Transposase C of IS166 homeodomain DMR_RS14315 PF13817 IS66 C-terminal element DMR_RS14315 PF03050 Transposase IS66 family DMR_RS14320 PF02743 Cache domain DMR_RS14320 PF00672 HAMP domain DMR_RS14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS14330 PF02743 Cache domain DMR_RS14330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS14330 PF00672 HAMP domain DMR_RS14330 PF00672 HAMP domain DMR_RS14330 PF02743 Cache domain DMR_RS14330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS14340 PF01584 CheW-like domain DMR_RS14340 PF00072 Response regulator receiver domain DMR_RS14375 PF13350 Tyrosine phosphatase family DMR_RS14445 PF00589 Phage integrase family DMR_RS14450 PF00589 Phage integrase family DMR_RS14470 PF13466 STAS domain DMR_RS14525 PF00589 Phage integrase family DMR_RS14550 PF12706 Beta-lactamase superfamily domain DMR_RS14555 PF08245 Mur ligase middle domain DMR_RS14560 PF03841 L-seryl-tRNA selenium transferase DMR_RS14560 PF12390 Selenocysteine synthase N terminal DMR_RS14570 PF02127 Aminopeptidase I zinc metalloprotease (M18) DMR_RS14575 PF03144 Elongation factor Tu domain 2 DMR_RS14575 PF00009 Elongation factor Tu GTP binding domain DMR_RS14575 PF09107 Elongation factor SelB, winged helix DMR_RS14575 PF09106 Elongation factor SelB, winged helix DMR_RS14580 PF00579 tRNA synthetases class I (W and Y) DMR_RS14585 PF02163 Peptidase family M50 DMR_RS14600 PF01171 PP-loop family DMR_RS14615 PF00535 Glycosyl transferase family 2 DMR_RS14625 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS14625 PF07724 AAA domain (Cdc48 subfamily) DMR_RS14625 PF17871 AAA lid domain DMR_RS14625 PF10431 C-terminal, D2-small domain, of ClpB protein DMR_RS14625 PF02861 Clp amino terminal domain, pathogenicity island component DMR_RS14635 PF01556 DnaJ C terminal domain DMR_RS14635 PF00226 DnaJ domain DMR_RS14650 PF00291 Pyridoxal-phosphate dependent enzyme DMR_RS14655 PF01209 ubiE/COQ5 methyltransferase family DMR_RS14670 PF02581 Thiamine monophosphate synthase DMR_RS14675 PF02110 Hydroxyethylthiazole kinase family DMR_RS14680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS14680 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS14680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS14680 PF00672 HAMP domain DMR_RS14680 PF00072 Response regulator receiver domain DMR_RS14680 PF01627 Hpt domain DMR_RS14690 PF11638 DnaA N-terminal domain DMR_RS14690 PF08299 Bacterial dnaA protein helix-turn-helix DMR_RS14690 PF00308 Bacterial dnaA protein DMR_RS14695 PF02511 Thymidylate synthase complementing protein DMR_RS14700 PF05496 Holliday junction DNA helicase RuvB P-loop domain DMR_RS14700 PF17864 RuvB AAA lid domain DMR_RS14700 PF05491 RuvB C-terminal winged helix domain DMR_RS14705 PF01330 RuvA N terminal domain DMR_RS14705 PF07499 RuvA, C-terminal domain DMR_RS14710 PF02075 Crossover junction endodeoxyribonuclease RuvC DMR_RS14715 PF01709 Transcriptional regulator DMR_RS14720 PF01728 FtsJ-like methyltransferase DMR_RS14755 PF01594 AI-2E family transporter DMR_RS14760 PF00155 Aminotransferase class I and II DMR_RS14765 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS14770 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS14775 PF00005 ABC transporter DMR_RS14795 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS14795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DMR_RS14805 PF00072 Response regulator receiver domain DMR_RS14810 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS14815 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS14820 PF00005 ABC transporter DMR_RS14825 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS14830 PF02913 FAD linked oxidases, C-terminal domain DMR_RS14830 PF01565 FAD binding domain DMR_RS14840 PF13847 Methyltransferase domain DMR_RS14845 PF08448 PAS fold DMR_RS14845 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS14850 PF02540 NAD synthase DMR_RS14850 PF00795 Carbon-nitrogen hydrolase DMR_RS14860 PF01258 Prokaryotic dksA/traR C4-type zinc finger DMR_RS14865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS14865 PF00672 HAMP domain DMR_RS14865 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS14865 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS14865 PF01627 Hpt domain DMR_RS14865 PF00072 Response regulator receiver domain DMR_RS14870 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS14870 PF17158 Membrane-associated sensor, integral membrane domain DMR_RS14875 PF05000 RNA polymerase Rpb1, domain 4 DMR_RS14875 PF04998 RNA polymerase Rpb1, domain 5 DMR_RS14875 PF04997 RNA polymerase Rpb1, domain 1 DMR_RS14875 PF00623 RNA polymerase Rpb1, domain 2 DMR_RS14875 PF04983 RNA polymerase Rpb1, domain 3 DMR_RS14880 PF04563 RNA polymerase beta subunit DMR_RS14880 PF04561 RNA polymerase Rpb2, domain 2 DMR_RS14880 PF04560 RNA polymerase Rpb2, domain 7 DMR_RS14880 PF04565 RNA polymerase Rpb2, domain 3 DMR_RS14880 PF00562 RNA polymerase Rpb2, domain 6 DMR_RS14880 PF10385 RNA polymerase beta subunit external 1 domain DMR_RS14885 PF16320 Ribosomal protein L7/L12 dimerisation domain DMR_RS14885 PF00542 Ribosomal protein L7/L12 C-terminal domain DMR_RS14890 PF00466 Ribosomal protein L10 DMR_RS14895 PF00687 Ribosomal protein L1p/L10e family DMR_RS14900 PF00298 Ribosomal protein L11, RNA binding domain DMR_RS14900 PF03946 Ribosomal protein L11, N-terminal domain DMR_RS14905 PF00467 KOW motif DMR_RS14905 PF02357 Transcription termination factor nusG DMR_RS14910 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DMR_RS14920 PF00471 Ribosomal protein L33 DMR_RS14925 PF03143 Elongation factor Tu C-terminal domain DMR_RS14925 PF00009 Elongation factor Tu GTP binding domain DMR_RS14925 PF03144 Elongation factor Tu domain 2 DMR_RS14950 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS14950 PF01434 Peptidase family M41 DMR_RS14950 PF17862 AAA+ lid domain DMR_RS14960 PF13847 Methyltransferase domain DMR_RS14960 PF17827 PrmC N-terminal domain DMR_RS14965 PF00472 RF-1 domain DMR_RS14965 PF03462 PCRF domain DMR_RS14970 PF07136 Protein of unknown function (DUF1385) DMR_RS14975 PF01197 Ribosomal protein L31 DMR_RS14980 PF01964 Radical SAM ThiC family DMR_RS14985 PF00300 Histidine phosphatase superfamily (branch 1) DMR_RS14990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DMR_RS14990 PF01926 50S ribosome-binding GTPase DMR_RS15025 PF02934 GatB/GatE catalytic domain DMR_RS15025 PF02637 GatB domain DMR_RS15030 PF01008 Initiation factor 2 subunit family DMR_RS15045 PF01513 ATP-NAD kinase DMR_RS15060 PF02623 FliW protein DMR_RS15065 PF02599 Global regulator protein family DMR_RS15075 PF00460 Flagella basal body rod protein DMR_RS15075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMR_RS15085 PF01476 LysM domain DMR_RS15085 PF01551 Peptidase family M23 DMR_RS15085 PF08525 Opacity-associated protein A N-terminal motif DMR_RS15090 PF02119 Flagellar P-ring protein DMR_RS15095 PF02107 Flagellar L-ring protein DMR_RS15105 PF00460 Flagella basal body rod protein DMR_RS15105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMR_RS15110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMR_RS15110 PF00460 Flagella basal body rod protein DMR_RS15120 PF02576 RimP N-terminal domain DMR_RS15125 PF13184 NusA-like KH domain DMR_RS15125 PF08529 NusA N-terminal domain DMR_RS15125 PF00575 S1 RNA binding domain DMR_RS15130 PF11987 Translation-initiation factor 2 DMR_RS15130 PF00009 Elongation factor Tu GTP binding domain DMR_RS15130 PF04760 Translation initiation factor IF-2, N-terminal region DMR_RS15140 PF02033 Ribosome-binding factor A DMR_RS15150 PF16198 tRNA pseudouridylate synthase B C-terminal domain DMR_RS15150 PF01509 TruB family pseudouridylate synthase (N terminal domain) DMR_RS15155 PF00312 Ribosomal protein S15 DMR_RS15160 PF00013 KH domain DMR_RS15160 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DMR_RS15160 PF00575 S1 RNA binding domain DMR_RS15160 PF01138 3' exoribonuclease family, domain 1 DMR_RS15160 PF03725 3' exoribonuclease family, domain 2 DMR_RS15170 PF01875 Memo-like protein DMR_RS15180 PF06490 Flagellar regulatory protein FleQ DMR_RS15180 PF02954 Bacterial regulatory protein, Fis family DMR_RS15180 PF00158 Sigma-54 interaction domain DMR_RS15185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMR_RS15185 PF00460 Flagella basal body rod protein DMR_RS15185 PF07559 Flagellar basal body protein FlaE DMR_RS15195 PF00205 Thiamine pyrophosphate enzyme, central domain DMR_RS15195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMR_RS15195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMR_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS15200 PF01627 Hpt domain DMR_RS15200 PF00072 Response regulator receiver domain DMR_RS15200 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS15200 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS15200 PF00672 HAMP domain DMR_RS15205 PF02649 Type I GTP cyclohydrolase folE2 DMR_RS15210 PF01402 Ribbon-helix-helix protein, copG family DMR_RS15210 PF08753 NikR C terminal nickel binding domain DMR_RS15220 PF01597 Glycine cleavage H-protein DMR_RS15225 PF02347 Glycine cleavage system P-protein DMR_RS15230 PF02347 Glycine cleavage system P-protein DMR_RS15235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS15235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMR_RS15245 PF02545 Maf-like protein DMR_RS15265 PF01966 HD domain DMR_RS15265 PF11871 Domain of unknown function (DUF3391) DMR_RS15335 PF00589 Phage integrase family DMR_RS15335 PF02899 Phage integrase, N-terminal SAM-like domain DMR_RS15340 PF00589 Phage integrase family DMR_RS15375 PF01381 Helix-turn-helix DMR_RS15390 PF13091 PLD-like domain DMR_RS15405 PF05443 ROS/MUCR transcriptional regulator protein DMR_RS15425 PF05443 ROS/MUCR transcriptional regulator protein DMR_RS15435 PF00919 Uncharacterized protein family UPF0004 DMR_RS15435 PF04055 Radical SAM superfamily DMR_RS15435 PF01938 TRAM domain DMR_RS15445 PF03755 YicC-like family, N-terminal region DMR_RS15445 PF08340 Domain of unknown function (DUF1732) DMR_RS15450 PF04025 Domain of unknown function (DUF370) DMR_RS15455 PF00625 Guanylate kinase DMR_RS15465 PF01368 DHH family DMR_RS15465 PF02272 DHHA1 domain DMR_RS15465 PF17768 RecJ OB domain DMR_RS15480 PF02470 MlaD protein DMR_RS15485 PF00005 ABC transporter DMR_RS15490 PF02405 Permease MlaE DMR_RS15500 PF01478 Type IV leader peptidase family DMR_RS15500 PF06750 Bacterial Peptidase A24 N-terminal domain DMR_RS15505 PF16916 Dimerisation domain of Zinc Transporter DMR_RS15505 PF01545 Cation efflux family DMR_RS15510 PF00072 Response regulator receiver domain DMR_RS15510 PF04397 LytTr DNA-binding domain DMR_RS15515 PF06580 Histidine kinase DMR_RS15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS15515 PF07694 5TMR of 5TMR-LYT DMR_RS15520 PF13722 5TM C-terminal transporter carbon starvation CstA DMR_RS15520 PF02554 Carbon starvation protein CstA DMR_RS15525 PF00072 Response regulator receiver domain DMR_RS15525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS15525 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS15525 PF01627 Hpt domain DMR_RS15545 PF01895 PhoU domain DMR_RS15575 PF02618 YceG-like family DMR_RS15580 PF03652 Holliday junction resolvase DMR_RS15585 PF01565 FAD binding domain DMR_RS15585 PF02913 FAD linked oxidases, C-terminal domain DMR_RS15590 PF00924 Mechanosensitive ion channel DMR_RS15605 PF03601 Conserved hypothetical protein 698 DMR_RS15610 PF00582 Universal stress protein family DMR_RS15615 PF08448 PAS fold DMR_RS15615 PF08447 PAS fold DMR_RS15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS15620 PF00158 Sigma-54 interaction domain DMR_RS15620 PF00072 Response regulator receiver domain DMR_RS15625 PF01810 LysE type translocator DMR_RS15630 PF01938 TRAM domain DMR_RS15630 PF00919 Uncharacterized protein family UPF0004 DMR_RS15630 PF04055 Radical SAM superfamily DMR_RS15635 PF00091 Tubulin/FtsZ family, GTPase domain DMR_RS15635 PF12327 FtsZ family, C-terminal domain DMR_RS15640 PF02491 SHS2 domain inserted in FTSA DMR_RS15645 PF08478 POTRA domain, FtsQ-type DMR_RS15645 PF03799 Cell division protein FtsQ DMR_RS15650 PF01565 FAD binding domain DMR_RS15650 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DMR_RS15655 PF08245 Mur ligase middle domain DMR_RS15655 PF02875 Mur ligase family, glutamate ligase domain DMR_RS15655 PF01225 Mur ligase family, catalytic domain DMR_RS15660 PF04101 Glycosyltransferase family 28 C-terminal domain DMR_RS15660 PF03033 Glycosyltransferase family 28 N-terminal domain DMR_RS15665 PF01098 Cell cycle protein DMR_RS15670 PF08245 Mur ligase middle domain DMR_RS15670 PF02875 Mur ligase family, glutamate ligase domain DMR_RS15675 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DMR_RS15675 PF00953 Glycosyl transferase family 4 DMR_RS15680 PF02875 Mur ligase family, glutamate ligase domain DMR_RS15680 PF08245 Mur ligase middle domain DMR_RS15680 PF01225 Mur ligase family, catalytic domain DMR_RS15685 PF02875 Mur ligase family, glutamate ligase domain DMR_RS15685 PF01225 Mur ligase family, catalytic domain DMR_RS15685 PF08245 Mur ligase middle domain DMR_RS15690 PF00905 Penicillin binding protein transpeptidase domain DMR_RS15690 PF03717 Penicillin-binding Protein dimerisation domain DMR_RS15700 PF01795 MraW methylase family DMR_RS15705 PF02381 MraZ protein, putative antitoxin-like DMR_RS15735 PF02895 Signal transducing histidine kinase, homodimeric domain DMR_RS15735 PF01627 Hpt domain DMR_RS15735 PF00072 Response regulator receiver domain DMR_RS15735 PF00072 Response regulator receiver domain DMR_RS15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS15735 PF01584 CheW-like domain DMR_RS15735 PF02895 Signal transducing histidine kinase, homodimeric domain DMR_RS15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS15735 PF01627 Hpt domain DMR_RS15735 PF01584 CheW-like domain DMR_RS15740 PF00072 Response regulator receiver domain DMR_RS15745 PF01584 CheW-like domain DMR_RS15750 PF13614 AAA domain DMR_RS15755 PF01739 CheR methyltransferase, SAM binding domain DMR_RS15755 PF03705 CheR methyltransferase, all-alpha domain DMR_RS15765 PF01339 CheB methylesterase DMR_RS15765 PF00072 Response regulator receiver domain DMR_RS15780 PF00403 Heavy-metal-associated domain DMR_RS15790 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DMR_RS15795 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DMR_RS15800 PF02441 Flavoprotein DMR_RS15805 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DMR_RS15810 PF02441 Flavoprotein DMR_RS15820 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS15820 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS15820 PF00672 HAMP domain DMR_RS15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS15820 PF01627 Hpt domain DMR_RS15820 PF00072 Response regulator receiver domain DMR_RS15835 PF01292 Prokaryotic cytochrome b561 DMR_RS15855 PF06968 Biotin and Thiamin Synthesis associated domain DMR_RS15855 PF04055 Radical SAM superfamily DMR_RS15880 PF00578 AhpC/TSA family DMR_RS15885 PF01464 Transglycosylase SLT domain DMR_RS15895 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS15895 PF08448 PAS fold DMR_RS15895 PF13188 PAS domain DMR_RS15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS15895 PF00072 Response regulator receiver domain DMR_RS15940 PF00437 Type II/IV secretion system protein DMR_RS15955 PF04972 BON domain DMR_RS15955 PF13629 Pilus formation protein N terminal region DMR_RS15955 PF00263 Bacterial type II and III secretion system protein DMR_RS15965 PF00158 Sigma-54 interaction domain DMR_RS15965 PF00072 Response regulator receiver domain DMR_RS15965 PF02954 Bacterial regulatory protein, Fis family DMR_RS16020 PF01479 S4 domain DMR_RS16020 PF00849 RNA pseudouridylate synthase DMR_RS16025 PF13361 UvrD-like helicase C-terminal domain DMR_RS16025 PF00580 UvrD/REP helicase N-terminal domain DMR_RS16025 PF12705 PD-(D/E)XK nuclease superfamily DMR_RS16045 PF02899 Phage integrase, N-terminal SAM-like domain DMR_RS16045 PF00589 Phage integrase family DMR_RS16065 PF17782 DprA winged helix domain DMR_RS16065 PF02481 DNA recombination-mediator protein A DMR_RS16090 PF17938 Tetracyclin repressor-like, C-terminal domain DMR_RS16090 PF00440 Bacterial regulatory proteins, tetR family DMR_RS16095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMR_RS16100 PF00873 AcrB/AcrD/AcrF family DMR_RS16110 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS16110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS16110 PF00989 PAS fold DMR_RS16110 PF00672 HAMP domain DMR_RS16120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMR_RS16120 PF00205 Thiamine pyrophosphate enzyme, central domain DMR_RS16120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMR_RS16140 PF06628 Catalase-related immune-responsive DMR_RS16140 PF00199 Catalase DMR_RS16145 PF00413 Matrixin DMR_RS16145 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DMR_RS16145 PF08548 Peptidase M10 serralysin C terminal DMR_RS16150 PF05981 CreA protein DMR_RS16155 PF00072 Response regulator receiver domain DMR_RS16155 PF02954 Bacterial regulatory protein, Fis family DMR_RS16155 PF00158 Sigma-54 interaction domain DMR_RS16160 PF00375 Sodium:dicarboxylate symporter family DMR_RS16165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DMR_RS16170 PF00890 FAD binding domain DMR_RS16170 PF02910 Fumarate reductase flavoprotein C-term DMR_RS16175 PF13085 2Fe-2S iron-sulfur cluster binding domain DMR_RS16175 PF13183 4Fe-4S dicluster domain DMR_RS16180 PF05681 Fumarate hydratase (Fumerase) DMR_RS16185 PF05683 Fumarase C-terminus DMR_RS16190 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DMR_RS16190 PF00175 Oxidoreductase NAD-binding domain DMR_RS16190 PF00970 Oxidoreductase FAD-binding domain DMR_RS16195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DMR_RS16195 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS16200 PF00390 Malic enzyme, N-terminal domain DMR_RS16200 PF03949 Malic enzyme, NAD binding domain DMR_RS16200 PF01515 Phosphate acetyl/butaryl transferase DMR_RS16210 PF01339 CheB methylesterase DMR_RS16210 PF08448 PAS fold DMR_RS16210 PF01739 CheR methyltransferase, SAM binding domain DMR_RS16210 PF03705 CheR methyltransferase, all-alpha domain DMR_RS16215 PF05443 ROS/MUCR transcriptional regulator protein DMR_RS16220 PF00132 Bacterial transferase hexapeptide (six repeats) DMR_RS16220 PF12464 Maltose acetyltransferase DMR_RS16240 PF13282 Domain of unknown function (DUF4070) DMR_RS16240 PF02310 B12 binding domain DMR_RS16240 PF04055 Radical SAM superfamily DMR_RS16250 PF00589 Phage integrase family DMR_RS16250 PF02899 Phage integrase, N-terminal SAM-like domain DMR_RS16325 PF13391 HNH endonuclease DMR_RS16345 PF13091 PLD-like domain DMR_RS16375 PF02021 Uncharacterised protein family UPF0102 DMR_RS16380 PF01351 Ribonuclease HII DMR_RS16385 PF01245 Ribosomal protein L19 DMR_RS16390 PF09936 SAM-dependent RNA methyltransferase DMR_RS16390 PF01746 tRNA (Guanine-1)-methyltransferase DMR_RS16395 PF01782 RimM N-terminal domain DMR_RS16395 PF05239 PRC-barrel domain DMR_RS16405 PF00886 Ribosomal protein S16 DMR_RS16410 PF02978 Signal peptide binding domain DMR_RS16410 PF02881 SRP54-type protein, helical bundle domain DMR_RS16410 PF00448 SRP54-type protein, GTPase domain DMR_RS16415 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DMR_RS16425 PF00155 Aminotransferase class I and II DMR_RS16430 PF01136 Peptidase family U32 DMR_RS16435 PF00300 Histidine phosphatase superfamily (branch 1) DMR_RS16455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMR_RS16470 PF00905 Penicillin binding protein transpeptidase domain DMR_RS16470 PF00912 Transglycosylase DMR_RS16485 PF00578 AhpC/TSA family DMR_RS16485 PF10417 C-terminal domain of 1-Cys peroxiredoxin DMR_RS16490 PF01966 HD domain DMR_RS16490 PF08335 GlnD PII-uridylyltransferase DMR_RS16495 PF00543 Nitrogen regulatory protein P-II DMR_RS16500 PF00909 Ammonium Transporter Family DMR_RS16505 PF00072 Response regulator receiver domain DMR_RS16505 PF00486 Transcriptional regulatory protein, C terminal DMR_RS16525 PF01627 Hpt domain DMR_RS16525 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS16525 PF00072 Response regulator receiver domain DMR_RS16530 PF00534 Glycosyl transferases group 1 DMR_RS16530 PF13439 Glycosyltransferase Family 4 DMR_RS16535 PF13439 Glycosyltransferase Family 4 DMR_RS16535 PF00534 Glycosyl transferases group 1 DMR_RS16540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMR_RS16540 PF00403 Heavy-metal-associated domain DMR_RS16540 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS16550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMR_RS16550 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS16555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DMR_RS16555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DMR_RS16560 PF01261 Xylose isomerase-like TIM barrel DMR_RS16565 PF00391 PEP-utilising enzyme, mobile domain DMR_RS16565 PF02896 PEP-utilising enzyme, TIM barrel domain DMR_RS16565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DMR_RS16570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS16570 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS16570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS16570 PF00072 Response regulator receiver domain DMR_RS16570 PF01627 Hpt domain DMR_RS16570 PF00672 HAMP domain DMR_RS16585 PF07726 ATPase family associated with various cellular activities (AAA) DMR_RS16585 PF17863 AAA lid domain DMR_RS16600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS16600 PF00072 Response regulator receiver domain DMR_RS16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS16600 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS16600 PF00672 HAMP domain DMR_RS16600 PF01627 Hpt domain DMR_RS16620 PF07584 Aerotolerance regulator N-terminal DMR_RS16620 PF13519 von Willebrand factor type A domain DMR_RS16625 PF13519 von Willebrand factor type A domain DMR_RS16640 PF13593 SBF-like CPA transporter family (DUF4137) DMR_RS16650 PF13581 Histidine kinase-like ATPase domain DMR_RS16650 PF07228 Stage II sporulation protein E (SpoIIE) DMR_RS16650 PF13466 STAS domain DMR_RS16650 PF08448 PAS fold DMR_RS16655 PF12724 Flavodoxin domain DMR_RS16665 PF01613 Flavin reductase like domain DMR_RS16675 PF01638 HxlR-like helix-turn-helix DMR_RS16690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DMR_RS16710 PF00072 Response regulator receiver domain DMR_RS16710 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS16715 PF00027 Cyclic nucleotide-binding domain DMR_RS16715 PF13545 Crp-like helix-turn-helix domain DMR_RS16730 PF02416 mttA/Hcf106 family DMR_RS16735 PF00672 HAMP domain DMR_RS16735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS16735 PF02743 Cache domain DMR_RS16740 PF03063 Prismane/CO dehydrogenase family DMR_RS16755 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS16770 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DMR_RS16775 PF00535 Glycosyl transferase family 2 DMR_RS16795 PF00072 Response regulator receiver domain DMR_RS16800 PF00072 Response regulator receiver domain DMR_RS16805 PF00690 Cation transporter/ATPase, N-terminus DMR_RS16805 PF00689 Cation transporting ATPase, C-terminus DMR_RS16810 PF17243 POTRA domain TamA domain 1 DMR_RS16810 PF01103 Surface antigen DMR_RS16810 PF07244 Surface antigen variable number repeat DMR_RS16820 PF00365 Phosphofructokinase DMR_RS16830 PF00392 Bacterial regulatory proteins, gntR family DMR_RS16830 PF00155 Aminotransferase class I and II DMR_RS16835 PF01740 STAS domain DMR_RS16840 PF00072 Response regulator receiver domain DMR_RS16840 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS16845 PF01728 FtsJ-like methyltransferase DMR_RS16845 PF18125 RlmM ferredoxin-like domain DMR_RS16850 PF02733 Dak1 domain DMR_RS16855 PF02734 DAK2 domain DMR_RS16860 PF00381 PTS HPr component phosphorylation site DMR_RS16860 PF05524 PEP-utilising enzyme, N-terminal DMR_RS16860 PF00391 PEP-utilising enzyme, mobile domain DMR_RS16860 PF02896 PEP-utilising enzyme, TIM barrel domain DMR_RS16860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DMR_RS16865 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS16865 PF00072 Response regulator receiver domain DMR_RS16865 PF00672 HAMP domain DMR_RS16865 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS16865 PF01627 Hpt domain DMR_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS16870 PF00873 AcrB/AcrD/AcrF family DMR_RS16875 PF00873 AcrB/AcrD/AcrF family DMR_RS16880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMR_RS16900 PF00588 SpoU rRNA Methylase family DMR_RS16905 PF12795 Mechanosensitive ion channel porin domain DMR_RS16905 PF12794 Mechanosensitive ion channel inner membrane domain 1 DMR_RS16905 PF00924 Mechanosensitive ion channel DMR_RS16940 PF01209 ubiE/COQ5 methyltransferase family DMR_RS16950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DMR_RS16950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DMR_RS16950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DMR_RS16960 PF02621 Menaquinone biosynthesis DMR_RS16965 PF00348 Polyprenyl synthetase DMR_RS16970 PF00586 AIR synthase related protein, N-terminal domain DMR_RS16970 PF02769 AIR synthase related protein, C-terminal domain DMR_RS16970 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DMR_RS16980 PF00672 HAMP domain DMR_RS16980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS16980 PF13426 PAS domain DMR_RS16985 PF00301 Rubredoxin DMR_RS16990 PF00753 Metallo-beta-lactamase superfamily DMR_RS16990 PF00258 Flavodoxin DMR_RS17030 PF13291 ACT domain DMR_RS17030 PF04607 Region found in RelA / SpoT proteins DMR_RS17030 PF02824 TGS domain DMR_RS17035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DMR_RS17040 PF00271 Helicase conserved C-terminal domain DMR_RS17040 PF00176 SNF2 family N-terminal domain DMR_RS17040 PF12419 SNF2 Helicase protein DMR_RS17045 PF00082 Subtilase family DMR_RS17045 PF05922 Peptidase inhibitor I9 DMR_RS17050 PF13847 Methyltransferase domain DMR_RS17125 PF13091 PLD-like domain DMR_RS17190 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DMR_RS17190 PF13538 UvrD-like helicase C-terminal domain DMR_RS17190 PF14490 Helix-hairpin-helix containing domain DMR_RS17200 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS17200 PF00360 Phytochrome region DMR_RS17200 PF00563 EAL domain DMR_RS17200 PF01590 GAF domain DMR_RS17205 PF01381 Helix-turn-helix DMR_RS17215 PF03851 UV-endonuclease UvdE DMR_RS17225 PF00486 Transcriptional regulatory protein, C terminal DMR_RS17225 PF00072 Response regulator receiver domain DMR_RS17230 PF01814 Hemerythrin HHE cation binding domain DMR_RS17245 PF08448 PAS fold DMR_RS17245 PF03705 CheR methyltransferase, all-alpha domain DMR_RS17245 PF01339 CheB methylesterase DMR_RS17245 PF01739 CheR methyltransferase, SAM binding domain DMR_RS17250 PF00072 Response regulator receiver domain DMR_RS17260 PF00672 HAMP domain DMR_RS17260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS17260 PF00072 Response regulator receiver domain DMR_RS17260 PF01627 Hpt domain DMR_RS17260 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS17340 PF00132 Bacterial transferase hexapeptide (six repeats) DMR_RS17345 PF13478 XdhC Rossmann domain DMR_RS17345 PF02625 XdhC and CoxI family DMR_RS17350 PF00266 Aminotransferase class-V DMR_RS17355 PF02445 Quinolinate synthetase A protein DMR_RS17365 PF00899 ThiF family DMR_RS17370 PF00291 Pyridoxal-phosphate dependent enzyme DMR_RS17375 PF04055 Radical SAM superfamily DMR_RS17375 PF06968 Biotin and Thiamin Synthesis associated domain DMR_RS17380 PF00005 ABC transporter DMR_RS17385 PF01053 Cys/Met metabolism PLP-dependent enzyme DMR_RS17390 PF01053 Cys/Met metabolism PLP-dependent enzyme DMR_RS17395 PF02082 Transcriptional regulator DMR_RS17400 PF00239 Resolvase, N terminal domain DMR_RS17400 PF02796 Helix-turn-helix domain of resolvase DMR_RS17415 PF07690 Major Facilitator Superfamily DMR_RS17430 PF00391 PEP-utilising enzyme, mobile domain DMR_RS17430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DMR_RS17435 PF02417 Chromate transporter DMR_RS17440 PF13801 Heavy-metal resistance DMR_RS17445 PF13847 Methyltransferase domain DMR_RS17450 PF08281 Sigma-70, region 4 DMR_RS17450 PF04542 Sigma-70 region 2 DMR_RS17455 PF00582 Universal stress protein family DMR_RS17460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS17460 PF01568 Molydopterin dinucleotide binding domain DMR_RS17460 PF00384 Molybdopterin oxidoreductase DMR_RS17470 PF13247 4Fe-4S dicluster domain DMR_RS17475 PF01022 Bacterial regulatory protein, arsR family DMR_RS17480 PF01758 Sodium Bile acid symporter family DMR_RS17505 PF00085 Thioredoxin DMR_RS17515 PF13247 4Fe-4S dicluster domain DMR_RS17520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS17520 PF01568 Molydopterin dinucleotide binding domain DMR_RS17520 PF00384 Molybdopterin oxidoreductase DMR_RS17555 PF00360 Phytochrome region DMR_RS17555 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS17555 PF01590 GAF domain DMR_RS17555 PF00563 EAL domain DMR_RS17560 PF02222 ATP-grasp domain DMR_RS17565 PF03193 RsgA GTPase DMR_RS17605 PF03412 Peptidase C39 family DMR_RS17605 PF00005 ABC transporter DMR_RS17605 PF00664 ABC transporter transmembrane region DMR_RS17610 PF02954 Bacterial regulatory protein, Fis family DMR_RS17610 PF00072 Response regulator receiver domain DMR_RS17610 PF00158 Sigma-54 interaction domain DMR_RS17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS17635 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS17635 PF01627 Hpt domain DMR_RS17635 PF00672 HAMP domain DMR_RS17635 PF00072 Response regulator receiver domain DMR_RS17635 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS17645 PF00158 Sigma-54 interaction domain DMR_RS17645 PF02954 Bacterial regulatory protein, Fis family DMR_RS17645 PF00072 Response regulator receiver domain DMR_RS17650 PF00158 Sigma-54 interaction domain DMR_RS17650 PF00072 Response regulator receiver domain DMR_RS17650 PF02954 Bacterial regulatory protein, Fis family DMR_RS17655 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS17685 PF00575 S1 RNA binding domain DMR_RS17685 PF17876 Cold shock domain DMR_RS17685 PF08206 Ribonuclease B OB domain DMR_RS17685 PF00773 RNB domain DMR_RS17695 PF12849 PBP superfamily domain DMR_RS17700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS17700 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS17700 PF09308 LuxQ, periplasmic DMR_RS17700 PF00072 Response regulator receiver domain DMR_RS17715 PF00486 Transcriptional regulatory protein, C terminal DMR_RS17715 PF00072 Response regulator receiver domain DMR_RS17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS17720 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS17720 PF00672 HAMP domain DMR_RS17730 PF01638 HxlR-like helix-turn-helix DMR_RS17750 PF01255 Putative undecaprenyl diphosphate synthase DMR_RS17755 PF01765 Ribosome recycling factor DMR_RS17760 PF00696 Amino acid kinase family DMR_RS17765 PF00889 Elongation factor TS DMR_RS17770 PF00318 Ribosomal protein S2 DMR_RS17775 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMR_RS17780 PF17770 Ribonuclease J C-terminal domain DMR_RS17780 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DMR_RS17780 PF00753 Metallo-beta-lactamase superfamily DMR_RS17810 PF02348 Cytidylyltransferase DMR_RS17815 PF02277 Phosphoribosyltransferase DMR_RS17825 PF00365 Phosphofructokinase DMR_RS17835 PF07732 Multicopper oxidase DMR_RS17835 PF07731 Multicopper oxidase DMR_RS17835 PF00394 Multicopper oxidase DMR_RS17845 PF00155 Aminotransferase class I and II DMR_RS17850 PF10396 GTP-binding protein TrmE N-terminus DMR_RS17850 PF12631 MnmE helical domain DMR_RS17850 PF01926 50S ribosome-binding GTPase DMR_RS17865 PF16363 GDP-mannose 4,6 dehydratase DMR_RS17875 PF00535 Glycosyl transferase family 2 DMR_RS17885 PF00535 Glycosyl transferase family 2 DMR_RS17890 PF00535 Glycosyl transferase family 2 DMR_RS17895 PF16363 GDP-mannose 4,6 dehydratase DMR_RS17915 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DMR_RS17915 PF01476 LysM domain DMR_RS17920 PF03062 MBOAT, membrane-bound O-acyltransferase family DMR_RS17955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS17955 PF00672 HAMP domain DMR_RS17955 PF02743 Cache domain DMR_RS17970 PF04012 PspA/IM30 family DMR_RS17975 PF02954 Bacterial regulatory protein, Fis family DMR_RS17975 PF00158 Sigma-54 interaction domain DMR_RS17980 PF05193 Peptidase M16 inactive domain DMR_RS17980 PF00675 Insulinase (Peptidase family M16) DMR_RS17985 PF01661 Macro domain DMR_RS17990 PF00227 Proteasome subunit DMR_RS17995 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS17995 PF07724 AAA domain (Cdc48 subfamily) DMR_RS18000 PF00696 Amino acid kinase family DMR_RS18010 PF00156 Phosphoribosyl transferase domain DMR_RS18035 PF00486 Transcriptional regulatory protein, C terminal DMR_RS18035 PF00072 Response regulator receiver domain DMR_RS18040 PF01966 HD domain DMR_RS18045 PF00196 Bacterial regulatory proteins, luxR family DMR_RS18045 PF03472 Autoinducer binding domain DMR_RS18065 PF01336 OB-fold nucleic acid binding domain DMR_RS18065 PF00152 tRNA synthetases class II (D, K and N) DMR_RS18070 PF02687 FtsX-like permease family DMR_RS18070 PF12704 MacB-like periplasmic core domain DMR_RS18075 PF00005 ABC transporter DMR_RS18080 PF01103 Surface antigen DMR_RS18080 PF07244 Surface antigen variable number repeat DMR_RS18090 PF07977 FabA-like domain DMR_RS18100 PF02001 Protein of unknown function DUF134 DMR_RS18115 PF01590 GAF domain DMR_RS18115 PF00158 Sigma-54 interaction domain DMR_RS18130 PF00027 Cyclic nucleotide-binding domain DMR_RS18130 PF13545 Crp-like helix-turn-helix domain DMR_RS18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18160 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS18160 PF08448 PAS fold DMR_RS18160 PF00072 Response regulator receiver domain DMR_RS18160 PF13188 PAS domain DMR_RS18165 PF00072 Response regulator receiver domain DMR_RS18190 PF06725 3D domain DMR_RS18190 PF03562 MltA specific insert domain DMR_RS18195 PF00072 Response regulator receiver domain DMR_RS18205 PF08668 HDOD domain DMR_RS18210 PF13188 PAS domain DMR_RS18210 PF13426 PAS domain DMR_RS18210 PF00989 PAS fold DMR_RS18210 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18215 PF02082 Transcriptional regulator DMR_RS18220 PF02954 Bacterial regulatory protein, Fis family DMR_RS18220 PF00072 Response regulator receiver domain DMR_RS18220 PF00158 Sigma-54 interaction domain DMR_RS18225 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DMR_RS18235 PF02562 PhoH-like protein DMR_RS18235 PF13638 PIN domain DMR_RS18240 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS18245 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS18250 PF12849 PBP superfamily domain DMR_RS18255 PF00834 Ribulose-phosphate 3 epimerase family DMR_RS18260 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS18260 PF09308 LuxQ, periplasmic DMR_RS18260 PF00072 Response regulator receiver domain DMR_RS18260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18270 PF01370 NAD dependent epimerase/dehydratase family DMR_RS18300 PF00849 RNA pseudouridylate synthase DMR_RS18300 PF01479 S4 domain DMR_RS18305 PF00588 SpoU rRNA Methylase family DMR_RS18305 PF08032 RNA 2'-O ribose methyltransferase substrate binding DMR_RS18310 PF05257 CHAP domain DMR_RS18310 PF01476 LysM domain DMR_RS18315 PF05698 Bacterial trigger factor protein (TF) C-terminus DMR_RS18320 PF00330 Aconitase family (aconitate hydratase) DMR_RS18325 PF00881 Nitroreductase family DMR_RS18330 PF04264 YceI-like domain DMR_RS18335 PF00672 HAMP domain DMR_RS18335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18335 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS18335 PF13426 PAS domain DMR_RS18340 PF01078 Magnesium chelatase, subunit ChlI DMR_RS18340 PF13335 Magnesium chelatase, subunit ChlI C-terminal DMR_RS18350 PF00672 HAMP domain DMR_RS18350 PF01627 Hpt domain DMR_RS18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18350 PF00072 Response regulator receiver domain DMR_RS18350 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS18350 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS18385 PF00483 Nucleotidyl transferase DMR_RS18390 PF00994 Probable molybdopterin binding domain DMR_RS18400 PF08448 PAS fold DMR_RS18400 PF08447 PAS fold DMR_RS18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18405 PF00072 Response regulator receiver domain DMR_RS18405 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS18415 PF03062 MBOAT, membrane-bound O-acyltransferase family DMR_RS18425 PF01544 CorA-like Mg2+ transporter protein DMR_RS18430 PF02224 Cytidylate kinase DMR_RS18435 PF00155 Aminotransferase class I and II DMR_RS18440 PF00582 Universal stress protein family DMR_RS18450 PF02834 LigT like Phosphoesterase DMR_RS18460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS18460 PF00672 HAMP domain DMR_RS18460 PF02743 Cache domain DMR_RS18470 PF01047 MarR family DMR_RS18495 PF01960 ArgJ family DMR_RS18520 PF00171 Aldehyde dehydrogenase family DMR_RS18530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMR_RS18530 PF03466 LysR substrate binding domain DMR_RS18535 PF05145 Transition state regulatory protein AbrB DMR_RS18540 PF10502 Signal peptidase, peptidase S26 DMR_RS18545 PF03144 Elongation factor Tu domain 2 DMR_RS18545 PF00009 Elongation factor Tu GTP binding domain DMR_RS18545 PF00679 Elongation factor G C-terminus DMR_RS18545 PF06421 GTP-binding protein LepA C-terminus DMR_RS18550 PF14306 PUA-like domain DMR_RS18550 PF01747 ATP-sulfurylase DMR_RS18555 PF01022 Bacterial regulatory protein, arsR family DMR_RS18565 PF00580 UvrD/REP helicase N-terminal domain DMR_RS18565 PF13361 UvrD-like helicase C-terminal domain DMR_RS18565 PF00570 HRDC domain DMR_RS18585 PF00069 Protein kinase domain DMR_RS18590 PF00132 Bacterial transferase hexapeptide (six repeats) DMR_RS18600 PF13237 4Fe-4S dicluster domain DMR_RS18640 PF00293 NUDIX domain DMR_RS18645 PF17820 PDZ domain DMR_RS18645 PF13180 PDZ domain DMR_RS18650 PF00011 Hsp20/alpha crystallin family DMR_RS18655 PF03966 Trm112p-like protein DMR_RS18665 PF00829 Ribosomal prokaryotic L21 protein DMR_RS18670 PF01016 Ribosomal L27 protein DMR_RS18675 PF00691 OmpA family DMR_RS18675 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMR_RS18680 PF01618 MotA/TolQ/ExbB proton channel family DMR_RS18685 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18685 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS18685 PF01627 Hpt domain DMR_RS18685 PF00072 Response regulator receiver domain DMR_RS18685 PF00989 PAS fold DMR_RS18695 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS18705 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS18720 PF02223 Thymidylate kinase DMR_RS18725 PF01966 HD domain DMR_RS18730 PF01975 Survival protein SurE DMR_RS18735 PF00072 Response regulator receiver domain DMR_RS18735 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS18745 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMR_RS18760 PF03471 Transporter associated domain DMR_RS18760 PF00571 CBS domain DMR_RS18760 PF01595 Cyclin M transmembrane N-terminal domain DMR_RS18770 PF00830 Ribosomal L28 family DMR_RS18780 PF01783 Ribosomal L32p protein family DMR_RS18785 PF02504 Fatty acid synthesis protein DMR_RS18790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DMR_RS18790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DMR_RS18800 PF00550 Phosphopantetheine attachment site DMR_RS18805 PF02801 Beta-ketoacyl synthase, C-terminal domain DMR_RS18805 PF00109 Beta-ketoacyl synthase, N-terminal domain DMR_RS18810 PF00464 Serine hydroxymethyltransferase DMR_RS18820 PF01638 HxlR-like helix-turn-helix DMR_RS18825 PF05368 NmrA-like family DMR_RS18835 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS18835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18835 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS18840 PF02954 Bacterial regulatory protein, Fis family DMR_RS18840 PF00072 Response regulator receiver domain DMR_RS18840 PF00158 Sigma-54 interaction domain DMR_RS18850 PF00072 Response regulator receiver domain DMR_RS18850 PF00486 Transcriptional regulatory protein, C terminal DMR_RS18855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS18855 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS18855 PF08448 PAS fold DMR_RS18855 PF13188 PAS domain DMR_RS18855 PF00072 Response regulator receiver domain DMR_RS18865 PF00158 Sigma-54 interaction domain DMR_RS18865 PF00072 Response regulator receiver domain DMR_RS18865 PF02954 Bacterial regulatory protein, Fis family DMR_RS18880 PF00158 Sigma-54 interaction domain DMR_RS18880 PF00072 Response regulator receiver domain DMR_RS18880 PF02954 Bacterial regulatory protein, Fis family DMR_RS18925 PF00211 Adenylate and Guanylate cyclase catalytic domain DMR_RS18930 PF00672 HAMP domain DMR_RS18930 PF02743 Cache domain DMR_RS18930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS18935 PF07690 Major Facilitator Superfamily DMR_RS18945 PF02719 Polysaccharide biosynthesis protein DMR_RS18950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DMR_RS18955 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DMR_RS18955 PF00535 Glycosyl transferase family 2 DMR_RS18980 PF00239 Resolvase, N terminal domain DMR_RS18980 PF02796 Helix-turn-helix domain of resolvase DMR_RS18985 PF01370 NAD dependent epimerase/dehydratase family DMR_RS18990 PF00483 Nucleotidyl transferase DMR_RS18995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DMR_RS19000 PF02585 GlcNAc-PI de-N-acetylase DMR_RS19005 PF08889 WbqC-like protein family DMR_RS19020 PF00551 Formyl transferase DMR_RS19020 PF02911 Formyl transferase, C-terminal domain DMR_RS19025 PF06463 Molybdenum Cofactor Synthesis C DMR_RS19025 PF04055 Radical SAM superfamily DMR_RS19035 PF03102 NeuB family DMR_RS19035 PF08666 SAF domain DMR_RS19040 PF02348 Cytidylyltransferase DMR_RS19075 PF02348 Cytidylyltransferase DMR_RS19085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DMR_RS19110 PF00440 Bacterial regulatory proteins, tetR family DMR_RS19110 PF16859 Tetracyclin repressor-like, C-terminal domain DMR_RS19120 PF00999 Sodium/hydrogen exchanger family DMR_RS19160 PF13817 IS66 C-terminal element DMR_RS19160 PF13007 Transposase C of IS166 homeodomain DMR_RS19160 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS19160 PF03050 Transposase IS66 family DMR_RS19165 PF05717 IS66 Orf2 like protein DMR_RS19175 PF02899 Phage integrase, N-terminal SAM-like domain DMR_RS19175 PF00589 Phage integrase family DMR_RS19185 PF08946 Osmosensory transporter coiled coil DMR_RS19185 PF00083 Sugar (and other) transporter DMR_RS19190 PF00072 Response regulator receiver domain DMR_RS19190 PF00486 Transcriptional regulatory protein, C terminal DMR_RS19195 PF00072 Response regulator receiver domain DMR_RS19195 PF00486 Transcriptional regulatory protein, C terminal DMR_RS19210 PF02705 K+ potassium transporter DMR_RS19235 PF13466 STAS domain DMR_RS19295 PF02421 Ferrous iron transport protein B DMR_RS19295 PF07670 Nucleoside recognition DMR_RS19295 PF17910 FeoB cytosolic helical domain DMR_RS19295 PF07664 Ferrous iron transport protein B C terminus DMR_RS19320 PF16916 Dimerisation domain of Zinc Transporter DMR_RS19320 PF01545 Cation efflux family DMR_RS19335 PF12801 4Fe-4S binding domain DMR_RS19355 PF18509 Magnetochrome domain DMR_RS19355 PF17820 PDZ domain DMR_RS19365 PF01545 Cation efflux family DMR_RS19365 PF16916 Dimerisation domain of Zinc Transporter DMR_RS19405 PF01797 Transposase IS200 like DMR_RS19425 PF13426 PAS domain DMR_RS19425 PF02954 Bacterial regulatory protein, Fis family DMR_RS19425 PF00158 Sigma-54 interaction domain DMR_RS19450 PF01925 Sulfite exporter TauE/SafE DMR_RS19495 PF03050 Transposase IS66 family DMR_RS19495 PF13817 IS66 C-terminal element DMR_RS19495 PF13007 Transposase C of IS166 homeodomain DMR_RS19495 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS19500 PF05717 IS66 Orf2 like protein DMR_RS19530 PF01584 CheW-like domain DMR_RS19560 PF13005 zinc-finger binding domain of transposase IS66 DMR_RS19560 PF03050 Transposase IS66 family DMR_RS19560 PF13007 Transposase C of IS166 homeodomain DMR_RS19560 PF13817 IS66 C-terminal element DMR_RS19565 PF05717 IS66 Orf2 like protein DMR_RS19575 PF00072 Response regulator receiver domain DMR_RS19575 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS19605 PF00872 Transposase, Mutator family DMR_RS19620 PF13361 UvrD-like helicase C-terminal domain DMR_RS19620 PF00580 UvrD/REP helicase N-terminal domain DMR_RS19650 PF09618 CRISPR-associated protein (Cas_Csy4) DMR_RS19655 PF09615 CRISPR-associated protein (Cas_Csy3) DMR_RS19660 PF09614 CRISPR-associated protein (Cas_Csy2) DMR_RS19665 PF09611 CRISPR-associated protein (Cas_Csy1) DMR_RS19670 PF18019 HD domain DMR_RS19675 PF01867 CRISPR associated protein Cas1 DMR_RS19695 PF00580 UvrD/REP helicase N-terminal domain DMR_RS19695 PF13361 UvrD-like helicase C-terminal domain DMR_RS19775 PF02772 S-adenosylmethionine synthetase, central domain DMR_RS19775 PF02773 S-adenosylmethionine synthetase, C-terminal domain DMR_RS19775 PF00438 S-adenosylmethionine synthetase, N-terminal domain DMR_RS19780 PF02569 Pantoate-beta-alanine ligase DMR_RS19790 PF01416 tRNA pseudouridine synthase DMR_RS19805 PF02654 Cobalamin-5-phosphate synthase DMR_RS19830 PF00119 ATP synthase A chain DMR_RS19835 PF00137 ATP synthase subunit C DMR_RS19840 PF02629 CoA binding domain DMR_RS19840 PF06971 Putative DNA-binding protein N-terminus DMR_RS19845 PF03591 AzlC protein DMR_RS19855 PF00072 Response regulator receiver domain DMR_RS19855 PF00158 Sigma-54 interaction domain DMR_RS19855 PF02954 Bacterial regulatory protein, Fis family DMR_RS19860 PF00582 Universal stress protein family DMR_RS19870 PF01925 Sulfite exporter TauE/SafE DMR_RS19890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DMR_RS19890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DMR_RS19905 PF04542 Sigma-70 region 2 DMR_RS19905 PF08281 Sigma-70, region 4 DMR_RS19915 PF01791 DeoC/LacD family aldolase DMR_RS19920 PF12706 Beta-lactamase superfamily domain DMR_RS19925 PF00877 NlpC/P60 family DMR_RS19930 PF00672 HAMP domain DMR_RS19930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS19930 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS19930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS19930 PF01627 Hpt domain DMR_RS19930 PF00072 Response regulator receiver domain DMR_RS19940 PF00571 CBS domain DMR_RS19960 PF03707 Bacterial signalling protein N terminal repeat DMR_RS19960 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS19960 PF00563 EAL domain DMR_RS19970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DMR_RS19970 PF00391 PEP-utilising enzyme, mobile domain DMR_RS19980 PF00072 Response regulator receiver domain DMR_RS19980 PF09308 LuxQ, periplasmic DMR_RS19980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS19980 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS19995 PF02085 Class III cytochrome C family DMR_RS20000 PF02754 Cysteine-rich domain DMR_RS20015 PF01464 Transglycosylase SLT domain DMR_RS20035 PF01566 Natural resistance-associated macrophage protein DMR_RS20050 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DMR_RS20060 PF03061 Thioesterase superfamily DMR_RS20120 PF13537 Glutamine amidotransferase domain DMR_RS20120 PF00733 Asparagine synthase DMR_RS20125 PF00534 Glycosyl transferases group 1 DMR_RS20125 PF13439 Glycosyltransferase Family 4 DMR_RS20135 PF13537 Glutamine amidotransferase domain DMR_RS20135 PF00733 Asparagine synthase DMR_RS20140 PF00535 Glycosyl transferase family 2 DMR_RS20165 PF00005 ABC transporter DMR_RS20170 PF00005 ABC transporter DMR_RS20170 PF02687 FtsX-like permease family DMR_RS20170 PF12704 MacB-like periplasmic core domain DMR_RS20175 PF00155 Aminotransferase class I and II DMR_RS20195 PF08448 PAS fold DMR_RS20195 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS20200 PF00535 Glycosyl transferase family 2 DMR_RS20220 PF00072 Response regulator receiver domain DMR_RS20230 PF01627 Hpt domain DMR_RS20230 PF02895 Signal transducing histidine kinase, homodimeric domain DMR_RS20230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS20230 PF01584 CheW-like domain DMR_RS20230 PF09078 CheY binding DMR_RS20235 PF01584 CheW-like domain DMR_RS20235 PF01627 Hpt domain DMR_RS20235 PF02895 Signal transducing histidine kinase, homodimeric domain DMR_RS20235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS20245 PF01740 STAS domain DMR_RS20245 PF00916 Sulfate permease family DMR_RS20250 PF00480 ROK family DMR_RS20280 PF01551 Peptidase family M23 DMR_RS20280 PF01476 LysM domain DMR_RS20285 PF00691 OmpA family DMR_RS20290 PF05193 Peptidase M16 inactive domain DMR_RS20290 PF08367 Peptidase M16C associated DMR_RS20290 PF00675 Insulinase (Peptidase family M16) DMR_RS20305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DMR_RS20305 PF02806 Alpha amylase, C-terminal all-beta domain DMR_RS20305 PF00128 Alpha amylase, catalytic domain DMR_RS20310 PF02446 4-alpha-glucanotransferase DMR_RS20320 PF00561 alpha/beta hydrolase fold DMR_RS20325 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMR_RS20330 PF01343 Peptidase family S49 DMR_RS20335 PF00575 S1 RNA binding domain DMR_RS20340 PF04055 Radical SAM superfamily DMR_RS20340 PF00919 Uncharacterized protein family UPF0004 DMR_RS20340 PF18693 TRAM domain DMR_RS20345 PF01725 Ham1 family DMR_RS20360 PF01494 FAD binding domain DMR_RS20380 PF00154 recA bacterial DNA recombination protein DMR_RS20385 PF01411 tRNA synthetases class II (A) DMR_RS20385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DMR_RS20385 PF02272 DHHA1 domain DMR_RS20390 PF00302 Chloramphenicol acetyltransferase DMR_RS20400 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DMR_RS20405 PF01520 N-acetylmuramoyl-L-alanine amidase DMR_RS20405 PF11741 AMIN domain DMR_RS20410 PF01380 SIS domain DMR_RS20425 PF16658 Class II release factor RF3, C-terminal domain DMR_RS20425 PF03144 Elongation factor Tu domain 2 DMR_RS20425 PF00009 Elongation factor Tu GTP binding domain DMR_RS20440 PF09308 LuxQ, periplasmic DMR_RS20440 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS20440 PF00072 Response regulator receiver domain DMR_RS20440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS20445 PF01584 CheW-like domain DMR_RS20445 PF00072 Response regulator receiver domain DMR_RS20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS20445 PF01627 Hpt domain DMR_RS20450 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DMR_RS20455 PF03551 Transcriptional regulator PadR-like family DMR_RS20455 PF13847 Methyltransferase domain DMR_RS20460 PF05221 S-adenosyl-L-homocysteine hydrolase DMR_RS20460 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DMR_RS20465 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS20470 PF01980 tRNA-methyltransferase O DMR_RS20470 PF18389 TrmO C-terminal domain DMR_RS20480 PF00005 ABC transporter DMR_RS20490 PF13247 4Fe-4S dicluster domain DMR_RS20495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DMR_RS20495 PF00037 4Fe-4S binding domain DMR_RS20495 PF02256 Iron hydrogenase small subunit DMR_RS20495 PF02906 Iron only hydrogenase large subunit, C-terminal domain DMR_RS20500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DMR_RS20500 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS20500 PF13247 4Fe-4S dicluster domain DMR_RS20510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS20510 PF01568 Molydopterin dinucleotide binding domain DMR_RS20510 PF00384 Molybdopterin oxidoreductase DMR_RS20515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMR_RS20515 PF00384 Molybdopterin oxidoreductase DMR_RS20515 PF01568 Molydopterin dinucleotide binding domain DMR_RS20515 PF10518 TAT (twin-arginine translocation) pathway signal sequence DMR_RS20525 PF13426 PAS domain DMR_RS20525 PF00672 HAMP domain DMR_RS20525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS20555 PF01264 Chorismate synthase DMR_RS20575 PF16925 Tetracyclin repressor-like, C-terminal domain DMR_RS20575 PF00440 Bacterial regulatory proteins, tetR family DMR_RS20590 PF00149 Calcineurin-like phosphoesterase DMR_RS20590 PF02872 5'-nucleotidase, C-terminal domain DMR_RS20595 PF01037 Lrp/AsnC ligand binding domain DMR_RS20600 PF00171 Aldehyde dehydrogenase family DMR_RS20610 PF01381 Helix-turn-helix DMR_RS20625 PF00270 DEAD/DEAH box helicase DMR_RS20625 PF00271 Helicase conserved C-terminal domain DMR_RS20635 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS20640 PF00005 ABC transporter DMR_RS20645 PF01061 ABC-2 type transporter DMR_RS20665 PF00072 Response regulator receiver domain DMR_RS20670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS20670 PF01627 Hpt domain DMR_RS20670 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS20670 PF00072 Response regulator receiver domain DMR_RS20675 PF12849 PBP superfamily domain DMR_RS20680 PF13185 GAF domain DMR_RS20680 PF02954 Bacterial regulatory protein, Fis family DMR_RS20680 PF00158 Sigma-54 interaction domain DMR_RS20705 PF00696 Amino acid kinase family DMR_RS20710 PF01925 Sulfite exporter TauE/SafE DMR_RS20715 PF12801 4Fe-4S binding domain DMR_RS20720 PF00072 Response regulator receiver domain DMR_RS20730 PF01554 MatE DMR_RS20735 PF03459 TOBE domain DMR_RS20735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMR_RS20740 PF12704 MacB-like periplasmic core domain DMR_RS20740 PF02687 FtsX-like permease family DMR_RS20740 PF00005 ABC transporter DMR_RS20745 PF13784 Fic/DOC family N-terminal DMR_RS20745 PF02661 Fic/DOC family DMR_RS20750 PF13439 Glycosyltransferase Family 4 DMR_RS20750 PF00534 Glycosyl transferases group 1 DMR_RS20760 PF00106 short chain dehydrogenase DMR_RS20765 PF01040 UbiA prenyltransferase family DMR_RS20775 PF00551 Formyl transferase DMR_RS20780 PF02602 Uroporphyrinogen-III synthase HemD DMR_RS20780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMR_RS20815 PF01551 Peptidase family M23 DMR_RS20815 PF01476 LysM domain DMR_RS20815 PF08525 Opacity-associated protein A N-terminal motif DMR_RS20825 PF00072 Response regulator receiver domain DMR_RS20825 PF01584 CheW-like domain DMR_RS20830 PF00664 ABC transporter transmembrane region DMR_RS20830 PF00005 ABC transporter DMR_RS20840 PF08241 Methyltransferase domain DMR_RS20845 PF00696 Amino acid kinase family DMR_RS20845 PF01472 PUA domain DMR_RS20855 PF04029 2-phosphosulpholactate phosphatase DMR_RS20860 PF11871 Domain of unknown function (DUF3391) DMR_RS20860 PF01966 HD domain DMR_RS20880 PF03458 UPF0126 domain DMR_RS20905 PF03477 ATP cone domain DMR_RS20905 PF02867 Ribonucleotide reductase, barrel domain DMR_RS20905 PF00317 Ribonucleotide reductase, all-alpha domain DMR_RS20915 PF00472 RF-1 domain DMR_RS20925 PF02543 Carbamoyltransferase N-terminus DMR_RS20925 PF16861 Carbamoyltransferase C-terminus DMR_RS20935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS20935 PF17202 Single cache domain 3 DMR_RS20935 PF00672 HAMP domain DMR_RS20940 PF00085 Thioredoxin DMR_RS20945 PF17805 AsnC-like ligand binding domain DMR_RS20945 PF13404 AsnC-type helix-turn-helix domain DMR_RS20950 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS20990 PF00563 EAL domain DMR_RS20990 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS20990 PF03707 Bacterial signalling protein N terminal repeat DMR_RS20990 PF13188 PAS domain DMR_RS20995 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMR_RS20995 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DMR_RS21030 PF07568 Histidine kinase DMR_RS21030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS21030 PF12282 Signal transduction histidine kinase DMR_RS21045 PF13533 Biotin-lipoyl like DMR_RS21050 PF00873 AcrB/AcrD/AcrF family DMR_RS21060 PF00317 Ribonucleotide reductase, all-alpha domain DMR_RS21060 PF03477 ATP cone domain DMR_RS21060 PF02867 Ribonucleotide reductase, barrel domain DMR_RS21065 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS21065 PF05362 Lon protease (S16) C-terminal proteolytic domain DMR_RS21065 PF02190 ATP-dependent protease La (LON) substrate-binding domain DMR_RS21070 PF00708 Acylphosphatase DMR_RS21075 PF04002 RadC-like JAB domain DMR_RS21090 PF13520 Amino acid permease DMR_RS21100 PF13597 Anaerobic ribonucleoside-triphosphate reductase DMR_RS21100 PF03477 ATP cone domain DMR_RS21115 PF16360 GTP-binding GTPase Middle Region DMR_RS21115 PF01926 50S ribosome-binding GTPase DMR_RS21115 PF13167 GTP-binding GTPase N-terminal DMR_RS21125 PF01145 SPFH domain / Band 7 family DMR_RS21145 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS21150 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS21155 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS21160 PF00005 ABC transporter DMR_RS21165 PF02683 Cytochrome C biogenesis protein transmembrane region DMR_RS21165 PF11412 Disulphide bond corrector protein DsbC DMR_RS21175 PF00226 DnaJ domain DMR_RS21175 PF01556 DnaJ C terminal domain DMR_RS21175 PF00684 DnaJ central domain DMR_RS21190 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DMR_RS21195 PF01027 Inhibitor of apoptosis-promoting Bax1 DMR_RS21200 PF00005 ABC transporter DMR_RS21200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMR_RS21205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMR_RS21205 PF00005 ABC transporter DMR_RS21220 PF05443 ROS/MUCR transcriptional regulator protein DMR_RS21230 PF00072 Response regulator receiver domain DMR_RS21230 PF00486 Transcriptional regulatory protein, C terminal DMR_RS21235 PF00923 Transaldolase/Fructose-6-phosphate aldolase DMR_RS21240 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DMR_RS21245 PF02142 MGS-like domain DMR_RS21245 PF01808 AICARFT/IMPCHase bienzyme DMR_RS21260 PF00460 Flagella basal body rod protein DMR_RS21260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMR_RS21265 PF02049 Flagellar hook-basal body complex protein FliE DMR_RS21270 PF08345 Flagellar M-ring protein C-terminal DMR_RS21270 PF01514 Secretory protein of YscJ/FliF family DMR_RS21275 PF01706 FliG C-terminal domain DMR_RS21275 PF14841 FliG middle domain DMR_RS21275 PF14842 FliG N-terminal domain DMR_RS21285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMR_RS21285 PF02874 ATP synthase alpha/beta family, beta-barrel domain DMR_RS21285 PF18269 T3SS EscN ATPase C-terminal domain DMR_RS21290 PF00155 Aminotransferase class I and II DMR_RS21295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS21295 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS21295 PF09308 LuxQ, periplasmic DMR_RS21295 PF00072 Response regulator receiver domain DMR_RS21350 PF13801 Heavy-metal resistance DMR_RS21375 PF00535 Glycosyl transferase family 2 DMR_RS21415 PF01022 Bacterial regulatory protein, arsR family DMR_RS21425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS21425 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS21425 PF09308 LuxQ, periplasmic DMR_RS21425 PF00072 Response regulator receiver domain DMR_RS21430 PF01965 DJ-1/PfpI family DMR_RS21430 PF12833 Helix-turn-helix domain DMR_RS21435 PF01965 DJ-1/PfpI family DMR_RS21440 PF00072 Response regulator receiver domain DMR_RS21440 PF00158 Sigma-54 interaction domain DMR_RS21440 PF02954 Bacterial regulatory protein, Fis family DMR_RS21445 PF00009 Elongation factor Tu GTP binding domain DMR_RS21445 PF03144 Elongation factor Tu domain 2 DMR_RS21445 PF03764 Elongation factor G, domain IV DMR_RS21445 PF14492 Elongation Factor G, domain II DMR_RS21445 PF00679 Elongation factor G C-terminus DMR_RS21490 PF03466 LysR substrate binding domain DMR_RS21490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMR_RS21500 PF01161 Phosphatidylethanolamine-binding protein DMR_RS21505 PF01116 Fructose-bisphosphate aldolase class-II DMR_RS21515 PF00892 EamA-like transporter family DMR_RS21525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS21525 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS21525 PF01627 Hpt domain DMR_RS21525 PF00072 Response regulator receiver domain DMR_RS21530 PF00005 ABC transporter DMR_RS21535 PF02653 Branched-chain amino acid transport system / permease component DMR_RS21535 PF11862 Domain of unknown function (DUF3382) DMR_RS21540 PF02653 Branched-chain amino acid transport system / permease component DMR_RS21545 PF13458 Periplasmic binding protein DMR_RS21550 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMR_RS21550 PF00005 ABC transporter DMR_RS21555 PF00202 Aminotransferase class-III DMR_RS21560 PF00692 dUTPase DMR_RS21565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DMR_RS21565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DMR_RS21570 PF02954 Bacterial regulatory protein, Fis family DMR_RS21570 PF13426 PAS domain DMR_RS21570 PF00158 Sigma-54 interaction domain DMR_RS21575 PF00343 Carbohydrate phosphorylase DMR_RS21575 PF11897 Protein of unknown function (DUF3417) DMR_RS21580 PF08241 Methyltransferase domain DMR_RS21605 PF05378 Hydantoinase/oxoprolinase N-terminal region DMR_RS21605 PF01968 Hydantoinase/oxoprolinase DMR_RS21610 PF00850 Histone deacetylase domain DMR_RS21620 PF08668 HDOD domain DMR_RS21660 PF05362 Lon protease (S16) C-terminal proteolytic domain DMR_RS21660 PF13654 AAA domain DMR_RS21665 PF07690 Major Facilitator Superfamily DMR_RS21675 PF09828 Chromate resistance exported protein DMR_RS21685 PF08668 HDOD domain DMR_RS21685 PF00563 EAL domain DMR_RS21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS21690 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS21695 PF00072 Response regulator receiver domain DMR_RS21695 PF00486 Transcriptional regulatory protein, C terminal DMR_RS21700 PF03749 Sugar fermentation stimulation protein RE domain DMR_RS21700 PF17746 SfsA N-terminal OB domain DMR_RS21705 PF00155 Aminotransferase class I and II DMR_RS21710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS21710 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS21710 PF00989 PAS fold DMR_RS21715 PF00072 Response regulator receiver domain DMR_RS21715 PF02954 Bacterial regulatory protein, Fis family DMR_RS21715 PF00158 Sigma-54 interaction domain DMR_RS21720 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS21720 PF00072 Response regulator receiver domain DMR_RS21725 PF00270 DEAD/DEAH box helicase DMR_RS21725 PF09369 Domain of unknown function (DUF1998) DMR_RS21725 PF00271 Helicase conserved C-terminal domain DMR_RS21730 PF00005 ABC transporter DMR_RS21740 PF00528 Binding-protein-dependent transport system inner membrane component DMR_RS21755 PF13187 4Fe-4S dicluster domain DMR_RS21755 PF01645 Conserved region in glutamate synthase DMR_RS21760 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DMR_RS21760 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMR_RS21795 PF01751 Toprim domain DMR_RS21795 PF01396 Topoisomerase DNA binding C4 zinc finger DMR_RS21795 PF01131 DNA topoisomerase DMR_RS21800 PF07650 KH domain DMR_RS21800 PF01926 50S ribosome-binding GTPase DMR_RS21805 PF01168 Alanine racemase, N-terminal domain DMR_RS21810 PF03748 Flagellar basal body-associated protein FliL DMR_RS21815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DMR_RS21825 PF00813 FliP family DMR_RS21830 PF01313 Bacterial export proteins, family 3 DMR_RS21850 PF00156 Phosphoribosyl transferase domain DMR_RS21855 PF00206 Lyase DMR_RS21855 PF10397 Adenylosuccinate lyase C-terminus DMR_RS21890 PF01751 Toprim domain DMR_RS21890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS21890 PF00986 DNA gyrase B subunit, carboxyl terminus DMR_RS21890 PF00204 DNA gyrase B DMR_RS21905 PF00521 DNA gyrase/topoisomerase IV, subunit A DMR_RS21905 PF03989 DNA gyrase C-terminal domain, beta-propeller DMR_RS21915 PF00521 DNA gyrase/topoisomerase IV, subunit A DMR_RS21915 PF03989 DNA gyrase C-terminal domain, beta-propeller DMR_RS21945 PF00294 pfkB family carbohydrate kinase DMR_RS21945 PF01467 Cytidylyltransferase-like DMR_RS21985 PF00920 Dehydratase family DMR_RS22215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS22215 PF02743 Cache domain DMR_RS22215 PF00672 HAMP domain DMR_RS22230 PF16750 Sensor domain of 2-component histidine kinase DMR_RS22230 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22230 PF00672 HAMP domain DMR_RS22240 PF01648 4'-phosphopantetheinyl transferase superfamily DMR_RS22245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22245 PF00072 Response regulator receiver domain DMR_RS22245 PF09308 LuxQ, periplasmic DMR_RS22245 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22250 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22250 PF09308 LuxQ, periplasmic DMR_RS22250 PF00072 Response regulator receiver domain DMR_RS22255 PF10502 Signal peptidase, peptidase S26 DMR_RS22265 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22265 PF00072 Response regulator receiver domain DMR_RS22265 PF09308 LuxQ, periplasmic DMR_RS22270 PF08447 PAS fold DMR_RS22270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22270 PF08448 PAS fold DMR_RS22275 PF01739 CheR methyltransferase, SAM binding domain DMR_RS22275 PF08448 PAS fold DMR_RS22275 PF03705 CheR methyltransferase, all-alpha domain DMR_RS22275 PF01339 CheB methylesterase DMR_RS22280 PF02743 Cache domain DMR_RS22280 PF00672 HAMP domain DMR_RS22280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS22285 PF00672 HAMP domain DMR_RS22285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS22285 PF02743 Cache domain DMR_RS22290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS22290 PF00672 HAMP domain DMR_RS22290 PF02743 Cache domain DMR_RS22295 PF00700 Bacterial flagellin C-terminal helical region DMR_RS22295 PF00669 Bacterial flagellin N-terminal helical region DMR_RS22300 PF00072 Response regulator receiver domain DMR_RS22310 PF00672 HAMP domain DMR_RS22310 PF02743 Cache domain DMR_RS22310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMR_RS22315 PF00563 EAL domain DMR_RS22315 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS22315 PF03707 Bacterial signalling protein N terminal repeat DMR_RS22320 PF00989 PAS fold DMR_RS22320 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22320 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMR_RS22320 PF01627 Hpt domain DMR_RS22320 PF00072 Response regulator receiver domain DMR_RS22325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22325 PF16736 Single Cache-like DMR_RS22325 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22325 PF00989 PAS fold DMR_RS22335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22335 PF08447 PAS fold DMR_RS22335 PF08448 PAS fold DMR_RS22355 PF16736 Single Cache-like DMR_RS22355 PF00989 PAS fold DMR_RS22355 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22360 PF01420 Type I restriction modification DNA specificity domain DMR_RS22365 PF17151 Periplasmic sensor domain DMR_RS22365 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS22380 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22380 PF00072 Response regulator receiver domain DMR_RS22380 PF09308 LuxQ, periplasmic DMR_RS22385 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS22390 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22390 PF00072 Response regulator receiver domain DMR_RS22390 PF09308 LuxQ, periplasmic DMR_RS22410 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22410 PF00072 Response regulator receiver domain DMR_RS22410 PF09308 LuxQ, periplasmic DMR_RS22420 PF01230 HIT domain DMR_RS22445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22445 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22445 PF09308 LuxQ, periplasmic DMR_RS22445 PF00072 Response regulator receiver domain DMR_RS22450 PF01966 HD domain DMR_RS22450 PF00072 Response regulator receiver domain DMR_RS22455 PF13188 PAS domain DMR_RS22455 PF08448 PAS fold DMR_RS22455 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22455 PF00072 Response regulator receiver domain DMR_RS22460 PF00196 Bacterial regulatory proteins, luxR family DMR_RS22460 PF00072 Response regulator receiver domain DMR_RS22470 PF00072 Response regulator receiver domain DMR_RS22480 PF00216 Bacterial DNA-binding protein DMR_RS22485 PF00196 Bacterial regulatory proteins, luxR family DMR_RS22485 PF00072 Response regulator receiver domain DMR_RS22520 PF17762 HTH domain found in ParB protein DMR_RS22520 PF02195 ParB-like nuclease domain DMR_RS22525 PF02796 Helix-turn-helix domain of resolvase DMR_RS22525 PF00239 Resolvase, N terminal domain DMR_RS22535 PF01814 Hemerythrin HHE cation binding domain DMR_RS22550 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22550 PF01627 Hpt domain DMR_RS22550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22550 PF00672 HAMP domain DMR_RS22550 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS22550 PF00072 Response regulator receiver domain DMR_RS22555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22555 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22555 PF00989 PAS fold DMR_RS22555 PF13188 PAS domain DMR_RS22555 PF13426 PAS domain DMR_RS22565 PF00535 Glycosyl transferase family 2 DMR_RS22570 PF00535 Glycosyl transferase family 2 DMR_RS22570 PF00534 Glycosyl transferases group 1 DMR_RS22575 PF00534 Glycosyl transferases group 1 DMR_RS22590 PF02861 Clp amino terminal domain, pathogenicity island component DMR_RS22590 PF10431 C-terminal, D2-small domain, of ClpB protein DMR_RS22590 PF17871 AAA lid domain DMR_RS22590 PF07724 AAA domain (Cdc48 subfamily) DMR_RS22590 PF00004 ATPase family associated with various cellular activities (AAA) DMR_RS22595 PF10609 NUBPL iron-transfer P-loop NTPase DMR_RS22610 PF17820 PDZ domain DMR_RS22610 PF18509 Magnetochrome domain DMR_RS22615 PF18509 Magnetochrome domain DMR_RS22615 PF17820 PDZ domain DMR_RS22645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22645 PF09308 LuxQ, periplasmic DMR_RS22645 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22645 PF00072 Response regulator receiver domain DMR_RS22650 PF00072 Response regulator receiver domain DMR_RS22650 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS22655 PF01627 Hpt domain DMR_RS22655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMR_RS22655 PF00072 Response regulator receiver domain DMR_RS22655 PF00672 HAMP domain DMR_RS22655 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22660 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22660 PF09308 LuxQ, periplasmic DMR_RS22660 PF00072 Response regulator receiver domain DMR_RS22670 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22670 PF09308 LuxQ, periplasmic DMR_RS22670 PF00072 Response regulator receiver domain DMR_RS22670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22675 PF00990 Diguanylate cyclase, GGDEF domain DMR_RS22675 PF07694 5TMR of 5TMR-LYT DMR_RS22685 PF00072 Response regulator receiver domain DMR_RS22685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22685 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22685 PF01627 Hpt domain DMR_RS22685 PF17149 Periplasmic sensor domain found in signal transduction proteins DMR_RS22685 PF00672 HAMP domain DMR_RS22690 PF00989 PAS fold DMR_RS22700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMR_RS22700 PF13188 PAS domain DMR_RS22700 PF00072 Response regulator receiver domain DMR_RS22700 PF00512 His Kinase A (phospho-acceptor) domain DMR_RS22700 PF08448 PAS fold