locus-tag	class	description
DKAM_RS00015	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DKAM_RS00030	COG0719	Fe-S assembly protein
DKAM_RS00035	COG0396	ATPase activity
DKAM_RS00040	COG0549	Belongs to the carbamate kinase family
DKAM_RS00050	COG0402	S-adenosylhomocysteine deaminase activity
DKAM_RS00060	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DKAM_RS00075	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DKAM_RS00080	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DKAM_RS00100	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKAM_RS00105	COG0076	glutamate decarboxylase activity
DKAM_RS00120	COG1812	S-adenosylmethionine synthetase (AdoMet synthetase)
DKAM_RS00155	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DKAM_RS00195	COG0009	L-threonylcarbamoyladenylate synthase
DKAM_RS00200	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
DKAM_RS00205	COG1444	tRNA N-acetyltransferase activity
DKAM_RS00210	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKAM_RS00215	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
DKAM_RS00225	COG0163	prenyltransferase activity
DKAM_RS00245	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DKAM_RS00260	COG0423	glycine-tRNA ligase activity
DKAM_RS00265	COG0010	Belongs to the arginase family
DKAM_RS00275	COG0023	Translation Initiation Factor
DKAM_RS00295	COG0504	CTP synthase activity
DKAM_RS00300	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
DKAM_RS00305	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DKAM_RS00330	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DKAM_RS00335	COG0581	inorganic phosphate transmembrane transporter activity
DKAM_RS00340	COG0573	inorganic phosphate transmembrane transporter activity
DKAM_RS00355	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DKAM_RS00355	COG1918	ferrous iron import across plasma membrane
DKAM_RS00380	COG0095	Lipoate-protein ligase
DKAM_RS00475	COG0543	2 iron, 2 sulfur cluster binding
DKAM_RS00480	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKAM_RS00480	COG0493	'glutamate synthase
DKAM_RS00495	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
DKAM_RS00510	COG0438	transferase activity, transferring glycosyl groups
DKAM_RS00520	COG4172	Belongs to the ABC transporter superfamily
DKAM_RS00530	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DKAM_RS00540	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DKAM_RS00560	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DKAM_RS00570	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DKAM_RS00595	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DKAM_RS00630	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DKAM_RS00635	COG0489	protein tyrosine kinase activity
DKAM_RS00655	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DKAM_RS00675	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DKAM_RS00690	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DKAM_RS00725	COG1201	RNA secondary structure unwinding
DKAM_RS00735	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DKAM_RS00770	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DKAM_RS00880	COG0167	dihydroorotate dehydrogenase activity
DKAM_RS00885	COG0126	phosphoglycerate kinase activity
DKAM_RS00895	COG0589	response to stress
DKAM_RS00900	COG0058	SHG alpha-glucan phosphorylase activity
DKAM_RS00935	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DKAM_RS00940	COG0405	Gamma-glutamyltransferase
DKAM_RS00960	COG0534	Mate efflux family protein
DKAM_RS00965	COG1011	Hydrolase
DKAM_RS00970	COG1546	Belongs to the CinA family
DKAM_RS00970	COG1058	Belongs to the CinA family
DKAM_RS01020	COG0315	cyclic pyranopterin monophosphate synthase activity
DKAM_RS01025	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DKAM_RS01030	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DKAM_RS01065	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DKAM_RS01085	COG1528	Iron-storage protein
DKAM_RS01105	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DKAM_RS01115	COG0601	transmembrane transport
DKAM_RS01120	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKAM_RS01125	COG0444	Belongs to the ABC transporter superfamily
DKAM_RS01150	COG1122	ATPase activity
DKAM_RS01165	COG0402	S-adenosylhomocysteine deaminase activity
DKAM_RS01175	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DKAM_RS01205	COG0517	IMP dehydrogenase activity
DKAM_RS01205	COG0516	GMP reductase activity
DKAM_RS01210	COG2723	6-phospho-beta-galactosidase activity
DKAM_RS01230	COG4555	ABC transporter
DKAM_RS01235	COG1085	galactose-1-phosphate uridylyltransferase
DKAM_RS01240	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DKAM_RS01280	COG1122	ATPase activity
DKAM_RS01290	COG0778	Nitroreductase
DKAM_RS01305	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DKAM_RS01330	COG1793	dna ligase
DKAM_RS01340	COG1573	uracil-dna glycosylase
DKAM_RS01370	COG0601	transmembrane transport
DKAM_RS01375	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKAM_RS01380	COG0444	Belongs to the ABC transporter superfamily
DKAM_RS01385	COG4608	Belongs to the ABC transporter superfamily
DKAM_RS01405	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DKAM_RS01410	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DKAM_RS01415	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DKAM_RS01420	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DKAM_RS01425	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DKAM_RS01430	COG0509	glycine decarboxylation via glycine cleavage system
DKAM_RS01435	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DKAM_RS01440	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DKAM_RS01495	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DKAM_RS01515	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DKAM_RS01540	COG1702	phosphate starvation-inducible protein PhoH
DKAM_RS01555	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DKAM_RS01560	COG0017	Asparaginyl-tRNA synthetase
DKAM_RS01570	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DKAM_RS01595	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
DKAM_RS01615	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DKAM_RS01630	COG1131	(ABC) transporter
DKAM_RS01645	COG3281	Trehalose synthase
DKAM_RS01655	COG1449	Belongs to the glycosyl hydrolase 57 family
DKAM_RS01660	COG0297	glycogen (starch) synthase activity
DKAM_RS01670	COG2404	hydrolase activity, acting on ester bonds
DKAM_RS01685	COG0501	Belongs to the peptidase M48B family
DKAM_RS01690	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DKAM_RS01760	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DKAM_RS01775	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DKAM_RS01780	COG2080	2 iron, 2 sulfur cluster binding
DKAM_RS01830	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DKAM_RS01855	COG4608	Belongs to the ABC transporter superfamily
DKAM_RS01860	COG0444	Belongs to the ABC transporter superfamily
DKAM_RS01865	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DKAM_RS01870	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKAM_RS01875	COG0601	transmembrane transport
DKAM_RS01905	COG3833	ABC-type maltose transport systems, permease component
DKAM_RS01925	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
DKAM_RS01935	COG0651	ATP synthesis coupled electron transport
DKAM_RS01945	COG1006	Multisubunit Na H antiporter MnhC subunit
DKAM_RS01985	COG3260	NADH ubiquinone oxidoreductase 20
DKAM_RS01990	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
DKAM_RS02025	COG1469	GTP cyclohydrolase I activity
DKAM_RS02035	COG2033	superoxide reductase activity
DKAM_RS02045	COG1522	sequence-specific DNA binding
DKAM_RS02055	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DKAM_RS02095	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DKAM_RS02120	COG0714	Associated with various cellular activities
DKAM_RS02145	COG0330	HflC and HflK could
DKAM_RS02185	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DKAM_RS02190	COG2151	metal-sulfur cluster biosynthetic enzyme
DKAM_RS02200	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
DKAM_RS02225	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DKAM_RS02245	COG0436	Aminotransferase
DKAM_RS02255	COG1899	peptidyl-lysine modification to peptidyl-hypusine
DKAM_RS02270	COG0167	dihydroorotate dehydrogenase activity
DKAM_RS02280	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DKAM_RS02290	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
DKAM_RS02305	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
DKAM_RS02310	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
DKAM_RS02315	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DKAM_RS02315	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DKAM_RS02325	COG4555	ABC transporter
DKAM_RS02350	COG0037	tRNA processing
DKAM_RS02355	COG1136	(ABC) transporter
DKAM_RS02355	COG4591	ABC-type transport system involved in lipoprotein release permease component
DKAM_RS02365	COG1136	(ABC) transporter
DKAM_RS02375	COG1131	(ABC) transporter
DKAM_RS02400	COG0303	'Molybdopterin
DKAM_RS02450	COG1141	Ferredoxin
DKAM_RS02465	COG0492	ferredoxin-NADP+ reductase activity
DKAM_RS02475	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DKAM_RS02485	COG0047	phosphoribosylformylglycinamidine synthase activity
DKAM_RS02490	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DKAM_RS02495	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DKAM_RS02500	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DKAM_RS02505	COG0151	Belongs to the GarS family
DKAM_RS02510	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DKAM_RS02515	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DKAM_RS02520	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DKAM_RS02530	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DKAM_RS02540	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DKAM_RS02555	COG1013	pyruvate-flavodoxin oxidoreductase activity
DKAM_RS02560	COG0674	pyruvate-flavodoxin oxidoreductase activity
DKAM_RS02560	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DKAM_RS02580	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DKAM_RS02615	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DKAM_RS02650	COG1342	Belongs to the UPF0251 family
DKAM_RS02730	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DKAM_RS02745	COG1013	pyruvate-flavodoxin oxidoreductase activity
DKAM_RS02750	COG0674	pyruvate-flavodoxin oxidoreductase activity
DKAM_RS02760	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DKAM_RS02770	COG0733	neurotransmitter:sodium symporter activity
DKAM_RS02775	COG1301	dicarboxylic acid transport
DKAM_RS02785	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DKAM_RS02785	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
DKAM_RS02820	COG2414	aldehyde ferredoxin oxidoreductase
DKAM_RS02825	COG0714	Associated with various cellular activities
DKAM_RS02870	COG0450	alkyl hydroperoxide reductase
DKAM_RS02880	COG1078	dGTPase activity
DKAM_RS02885	COG0463	Glycosyl transferase, family 2
DKAM_RS02895	COG0295	cytidine deaminase activity
DKAM_RS02905	COG0419	ATPase involved in DNA repair
DKAM_RS02910	COG0433	COG0433 Predicted ATPase
DKAM_RS02925	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DKAM_RS02930	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKAM_RS02935	COG1830	Aldolase
DKAM_RS02950	COG1129	ABC transporter
DKAM_RS02975	COG0495	leucyl-tRNA aminoacylation
DKAM_RS02985	COG2095	MarC family integral membrane protein
DKAM_RS03000	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DKAM_RS03010	COG0439	Biotin carboxylase
DKAM_RS03015	COG0574	Belongs to the PEP-utilizing enzyme family
DKAM_RS03015	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DKAM_RS03055	COG1177	transmembrane transport
DKAM_RS03060	COG3842	ATPase activity
DKAM_RS03100	COG0409	Hydrogenase expression formation protein
DKAM_RS03110	COG1166	arginine decarboxylase activity
DKAM_RS03120	COG0864	Transcriptional regulator
DKAM_RS03155	COG0183	Belongs to the thiolase family
DKAM_RS03180	COG0714	Associated with various cellular activities
DKAM_RS03190	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DKAM_RS03210	COG3608	succinylglutamate desuccinylase aspartoacylase
DKAM_RS03210	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
DKAM_RS03230	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DKAM_RS03250	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DKAM_RS03280	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DKAM_RS03285	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DKAM_RS03395	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
DKAM_RS03400	COG0351	phosphomethylpyrimidine kinase
DKAM_RS03405	COG0303	'Molybdopterin
DKAM_RS03410	COG4581	dead DEAH box helicase
DKAM_RS03415	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DKAM_RS03420	COG0489	protein tyrosine kinase activity
DKAM_RS03440	COG0037	tRNA processing
DKAM_RS03470	COG1574	metal-dependent hydrolase with the TIM-barrel fold
DKAM_RS03485	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
DKAM_RS03490	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DKAM_RS03505	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DKAM_RS03510	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DKAM_RS03525	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
DKAM_RS03560	COG1122	ATPase activity
DKAM_RS03570	COG1201	RNA secondary structure unwinding
DKAM_RS03585	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DKAM_RS03585	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DKAM_RS03660	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DKAM_RS03790	COG0813	purine-nucleoside phosphorylase activity
DKAM_RS03795	COG0215	cysteine-tRNA ligase activity
DKAM_RS03825	COG1872	DUF167
DKAM_RS03830	COG1867	N(2),N(2)-dimethylguanosine tRNA methyltransferase
DKAM_RS03860	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DKAM_RS03865	COG0156	8-amino-7-oxononanoate synthase activity
DKAM_RS03870	COG0252	asparaginase activity
DKAM_RS03875	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DKAM_RS03890	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DKAM_RS03905	COG1110	DNA topoisomerase II activity
DKAM_RS03910	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DKAM_RS03920	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DKAM_RS03925	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DKAM_RS03930	COG0534	Mate efflux family protein
DKAM_RS03955	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKAM_RS03960	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
DKAM_RS03965	COG0622	Phosphoesterase
DKAM_RS04005	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DKAM_RS04005	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DKAM_RS04015	COG1301	dicarboxylic acid transport
DKAM_RS04055	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DKAM_RS04090	COG1515	deoxyribonuclease V activity
DKAM_RS04100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKAM_RS04105	COG0601	transmembrane transport
DKAM_RS04120	COG1051	belongs to the nudix hydrolase family
DKAM_RS04120	COG1056	cytidyltransferase-related domain
DKAM_RS04180	COG2267	carboxylic ester hydrolase activity
DKAM_RS04270	COG0656	L-ascorbic acid biosynthetic process
DKAM_RS04285	COG0563	adenylate kinase activity
DKAM_RS04300	COG0017	Asparaginyl-tRNA synthetase
DKAM_RS04325	COG0483	inositol monophosphate 1-phosphatase activity
DKAM_RS04330	COG0006	proline dipeptidase activity
DKAM_RS04345	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DKAM_RS04390	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DKAM_RS04400	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKAM_RS04400	COG1042	CoA-binding domain protein
DKAM_RS04400	COG0045	succinate-CoA ligase (ADP-forming) activity
DKAM_RS04410	COG2059	Chromate
DKAM_RS04435	COG0704	Plays a role in the regulation of phosphate uptake
DKAM_RS04455	COG1342	Belongs to the UPF0251 family
DKAM_RS04480	COG1899	peptidyl-lysine modification to peptidyl-hypusine
DKAM_RS04485	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
DKAM_RS04495	COG1863	multisubunit Na H antiporter MnhE subunit
DKAM_RS04530	COG0649	NAD binding
DKAM_RS04535	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DKAM_RS04545	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DKAM_RS04550	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DKAM_RS04595	COG2212	antiporter activity
DKAM_RS04600	COG1320	monovalent cation:proton antiporter activity
DKAM_RS04700	COG0494	nUDIX hydrolase
DKAM_RS04710	COG1394	ATPase activity, coupled to movement of substances
DKAM_RS04755	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
DKAM_RS04770	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DKAM_RS04785	COG4974	Belongs to the 'phage' integrase family
DKAM_RS04815	COG2222	sugar isomerase
DKAM_RS04845	COG0546	phosphoglycolate phosphatase activity
DKAM_RS04855	COG0493	'glutamate synthase
DKAM_RS04860	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKAM_RS04865	COG0651	ATP synthesis coupled electron transport
DKAM_RS04870	COG0651	ATP synthesis coupled electron transport
DKAM_RS04885	COG3261	NADH dehydrogenase
DKAM_RS04885	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
DKAM_RS04890	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DKAM_RS04895	COG3260	NADH ubiquinone oxidoreductase 20
DKAM_RS04955	COG0459	protein refolding
DKAM_RS04970	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DKAM_RS04975	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DKAM_RS04985	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DKAM_RS04990	COG0045	succinate-CoA ligase (ADP-forming) activity
DKAM_RS05015	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
DKAM_RS05020	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DKAM_RS05035	COG0189	ligase activity
DKAM_RS05055	COG0525	valine-tRNA ligase activity
DKAM_RS05060	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DKAM_RS05060	COG1796	DNA polymerase
DKAM_RS05115	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DKAM_RS05115	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DKAM_RS05125	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DKAM_RS05140	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DKAM_RS05155	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKAM_RS05170	COG3842	ATPase activity
DKAM_RS05185	COG0585	pseudouridine synthase activity
DKAM_RS05215	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DKAM_RS05255	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DKAM_RS05265	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
DKAM_RS05275	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DKAM_RS05280	COG1028	Short-chain dehydrogenase reductase Sdr
DKAM_RS05295	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKAM_RS05300	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DKAM_RS05310	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DKAM_RS05480	COG1489	DNA binding
DKAM_RS05505	COG0717	Belongs to the dCTP deaminase family
DKAM_RS05510	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DKAM_RS05545	COG1404	Belongs to the peptidase S8 family
DKAM_RS05555	COG2813	Specifically methylates the guanine in position
DKAM_RS05575	COG0563	adenylate kinase activity
DKAM_RS05630	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DKAM_RS05640	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DKAM_RS05655	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DKAM_RS05670	COG0255	Belongs to the universal ribosomal protein uL29 family
DKAM_RS05675	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DKAM_RS05680	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DKAM_RS05685	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DKAM_RS05700	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DKAM_RS05705	COG0089	rRNA binding
DKAM_RS05715	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DKAM_RS05725	COG0175	sulfate reduction
DKAM_RS05730	COG1201	RNA secondary structure unwinding
DKAM_RS05765	COG0674	pyruvate-flavodoxin oxidoreductase activity
DKAM_RS05770	COG1013	pyruvate-flavodoxin oxidoreductase activity
DKAM_RS05785	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
DKAM_RS05835	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DKAM_RS05890	COG0124	histidyl-tRNA synthetase
DKAM_RS05900	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
DKAM_RS05915	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DKAM_RS05925	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DKAM_RS05965	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DKAM_RS05990	COG1110	DNA topoisomerase II activity
DKAM_RS06015	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DKAM_RS06020	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DKAM_RS06070	COG0149	triose-phosphate isomerase activity
DKAM_RS06075	COG1980	fructose-bisphosphate aldolase activity
DKAM_RS06080	COG1129	ABC transporter
DKAM_RS06110	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
DKAM_RS06125	COG0343	queuine tRNA-ribosyltransferase activity
DKAM_RS06150	COG0492	ferredoxin-NADP+ reductase activity
DKAM_RS06155	COG0667	Aldo Keto reductase
DKAM_RS06180	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKAM_RS06210	COG1404	Belongs to the peptidase S8 family
DKAM_RS06245	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DKAM_RS06250	COG0430	RNA-3'-phosphate cyclase activity
DKAM_RS06255	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DKAM_RS06260	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DKAM_RS06265	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
DKAM_RS06275	COG1047	Peptidyl-prolyl cis-trans
DKAM_RS06320	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DKAM_RS06335	COG0864	Transcriptional regulator
DKAM_RS06360	COG0864	Transcriptional regulator
DKAM_RS06380	COG0417	DNA replication proofreading
DKAM_RS06390	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DKAM_RS06400	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DKAM_RS06430	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DKAM_RS06435	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DKAM_RS06480	COG0012	GTP binding
DKAM_RS06510	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DKAM_RS06515	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DKAM_RS06525	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DKAM_RS06545	COG1185	polyribonucleotide nucleotidyltransferase activity
DKAM_RS06565	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DKAM_RS06585	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DKAM_RS06595	COG1304	FMN binding
DKAM_RS06600	COG1355	regulation of microtubule-based process
DKAM_RS06605	COG0052	Belongs to the universal ribosomal protein uS2 family
DKAM_RS06615	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DKAM_RS06620	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DKAM_RS06625	COG0200	Binds to the 23S rRNA
DKAM_RS06635	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DKAM_RS06645	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DKAM_RS06655	COG0051	transcription antitermination factor activity, RNA binding
DKAM_RS06660	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DKAM_RS06665	COG0049	tRNA binding
DKAM_RS06685	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DKAM_RS06690	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DKAM_RS06695	COG0085	RNA polymerase activity
DKAM_RS06715	COG1628	Protein of unknown function DUF99
DKAM_RS06720	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
DKAM_RS06745	COG1115	amino acid carrier protein
DKAM_RS06750	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DKAM_RS06760	COG1160	GTP binding
DKAM_RS06770	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DKAM_RS06795	COG1079	Belongs to the binding-protein-dependent transport system permease family
DKAM_RS06800	COG4603	Belongs to the binding-protein-dependent transport system permease family
DKAM_RS06805	COG3845	ABC transporter
DKAM_RS06810	COG1744	ABC transporter substrate-binding protein PnrA-like
DKAM_RS06820	COG0698	ribose 5-phosphate isomerase
DKAM_RS06825	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DKAM_RS06830	COG0528	UMP kinase activity
DKAM_RS06840	COG1028	Short-chain dehydrogenase reductase Sdr
DKAM_RS06850	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
DKAM_RS06855	COG2264	protein methyltransferase activity
DKAM_RS06885	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DKAM_RS06895	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DKAM_RS06960	COG1185	polyribonucleotide nucleotidyltransferase activity
DKAM_RS06990	COG1120	ATPase activity
DKAM_RS06995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKAM_RS07030	COG0148	phosphopyruvate hydratase activity
DKAM_RS07040	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DKAM_RS07070	COG3842	ATPase activity
DKAM_RS07075	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKAM_RS07095	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DKAM_RS07110	COG0142	geranyltranstransferase activity
DKAM_RS07120	COG0180	Tryptophanyl-tRNA synthetase
DKAM_RS07125	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DKAM_RS07175	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DKAM_RS07180	COG2078	PFAM AMMECR1 domain protein
DKAM_RS07225	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DKAM_RS07290	COG0174	glutamine synthetase
DKAM_RS07370	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DKAM_RS07375	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline