locus-tag class description APS40_RS00020 PF05199 GMC oxidoreductase APS40_RS00020 PF00732 GMC oxidoreductase APS40_RS00025 PF05199 GMC oxidoreductase APS40_RS00025 PF00732 GMC oxidoreductase APS40_RS00030 PF00156 Phosphoribosyl transferase domain APS40_RS00035 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS00040 PF05448 Acetyl xylan esterase (AXE1) APS40_RS00045 PF00356 Bacterial regulatory proteins, lacI family APS40_RS00050 PF08531 Alpha-L-rhamnosidase N-terminal domain APS40_RS00050 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain APS40_RS00050 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain APS40_RS00050 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain APS40_RS00060 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS00065 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS00070 PF07690 Major Facilitator Superfamily APS40_RS00090 PF07690 Major Facilitator Superfamily APS40_RS00100 PF00664 ABC transporter transmembrane region APS40_RS00100 PF00005 ABC transporter APS40_RS00110 PF01494 FAD binding domain APS40_RS00115 PF02705 K+ potassium transporter APS40_RS00120 PF03358 NADPH-dependent FMN reductase APS40_RS00135 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ APS40_RS00150 PF10369 Small subunit of acetolactate synthase APS40_RS00155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS40_RS00155 PF00205 Thiamine pyrophosphate enzyme, central domain APS40_RS00155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS40_RS00175 PF00005 ABC transporter APS40_RS00175 PF12848 ABC transporter APS40_RS00190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS00190 PF13378 Enolase C-terminal domain-like APS40_RS00210 PF01618 MotA/TolQ/ExbB proton channel family APS40_RS00215 PF13677 Membrane MotB of proton-channel complex MotA/MotB APS40_RS00215 PF00691 OmpA family APS40_RS00220 PF00313 'Cold-shock' DNA-binding domain APS40_RS00240 PF01554 MatE APS40_RS00245 PF04073 Aminoacyl-tRNA editing domain APS40_RS00260 PF13302 Acetyltransferase (GNAT) domain APS40_RS00265 PF13180 PDZ domain APS40_RS00275 PF01145 SPFH domain / Band 7 family APS40_RS00280 PF12221 Bacterial membrane protein N terminal APS40_RS00280 PF01145 SPFH domain / Band 7 family APS40_RS00285 PF00186 Dihydrofolate reductase APS40_RS00305 PF00303 Thymidylate synthase APS40_RS00330 PF13361 UvrD-like helicase C-terminal domain APS40_RS00330 PF00580 UvrD/REP helicase N-terminal domain APS40_RS00335 PF00892 EamA-like transporter family APS40_RS00340 PF13091 PLD-like domain APS40_RS00375 PF00533 BRCA1 C Terminus (BRCT) domain APS40_RS00375 PF12826 Helix-hairpin-helix motif APS40_RS00375 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APS40_RS00375 PF03120 NAD-dependent DNA ligase OB-fold domain APS40_RS00375 PF01653 NAD-dependent DNA ligase adenylation domain APS40_RS00380 PF02463 RecF/RecN/SMC N terminal domain APS40_RS00385 PF13525 Outer membrane lipoprotein APS40_RS00390 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APS40_RS00395 PF12327 FtsZ family, C-terminal domain APS40_RS00395 PF00091 Tubulin/FtsZ family, GTPase domain APS40_RS00400 PF02491 SHS2 domain inserted in FTSA APS40_RS00405 PF03799 Cell division protein FtsQ APS40_RS00410 PF01820 D-ala D-ala ligase N-terminus APS40_RS00410 PF07478 D-ala D-ala ligase C-terminus APS40_RS00415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APS40_RS00415 PF01565 FAD binding domain APS40_RS00420 PF02875 Mur ligase family, glutamate ligase domain APS40_RS00420 PF01225 Mur ligase family, catalytic domain APS40_RS00420 PF08245 Mur ligase middle domain APS40_RS00425 PF03033 Glycosyltransferase family 28 N-terminal domain APS40_RS00425 PF04101 Glycosyltransferase family 28 C-terminal domain APS40_RS00430 PF01098 Cell cycle protein APS40_RS00435 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APS40_RS00435 PF00953 Glycosyl transferase family 4 APS40_RS00440 PF02875 Mur ligase family, glutamate ligase domain APS40_RS00440 PF01225 Mur ligase family, catalytic domain APS40_RS00440 PF08245 Mur ligase middle domain APS40_RS00445 PF02875 Mur ligase family, glutamate ligase domain APS40_RS00445 PF01225 Mur ligase family, catalytic domain APS40_RS00445 PF08245 Mur ligase middle domain APS40_RS00450 PF03717 Penicillin-binding Protein dimerisation domain APS40_RS00450 PF00905 Penicillin binding protein transpeptidase domain APS40_RS00460 PF01795 MraW methylase family APS40_RS00465 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS00465 PF00107 Zinc-binding dehydrogenase APS40_RS00470 PF01381 Helix-turn-helix APS40_RS00480 PF05099 Tellurite resistance protein TerB APS40_RS00480 PF00226 DnaJ domain APS40_RS00490 PF02219 Methylenetetrahydrofolate reductase APS40_RS00495 PF01022 Bacterial regulatory protein, arsR family APS40_RS00505 PF00141 Peroxidase APS40_RS00510 PF03466 LysR substrate binding domain APS40_RS00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS00525 PF00892 EamA-like transporter family APS40_RS00540 PF00581 Rhodanese-like domain APS40_RS00545 PF01965 DJ-1/PfpI family APS40_RS00550 PF00561 alpha/beta hydrolase fold APS40_RS00560 PF13649 Methyltransferase domain APS40_RS00565 PF00764 Arginosuccinate synthase APS40_RS00570 PF12848 ABC transporter APS40_RS00570 PF00005 ABC transporter APS40_RS00575 PF03600 Citrate transporter APS40_RS00575 PF02080 TrkA-C domain APS40_RS00585 PF01037 Lrp/AsnC ligand binding domain APS40_RS00590 PF00291 Pyridoxal-phosphate dependent enzyme APS40_RS00605 PF00384 Molybdopterin oxidoreductase APS40_RS00615 PF01965 DJ-1/PfpI family APS40_RS00620 PF13533 Biotin-lipoyl like APS40_RS00625 PF00873 AcrB/AcrD/AcrF family APS40_RS00645 PF02653 Branched-chain amino acid transport system / permease component APS40_RS00655 PF00005 ABC transporter APS40_RS00655 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS40_RS00660 PF00005 ABC transporter APS40_RS00665 PF01774 UreD urease accessory protein APS40_RS00670 PF00547 Urease, gamma subunit APS40_RS00675 PF00699 Urease beta subunit APS40_RS00695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS40_RS00695 PF00034 Cytochrome c APS40_RS00700 PF00449 Urease alpha-subunit, N-terminal domain APS40_RS00700 PF01979 Amidohydrolase family APS40_RS00705 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme APS40_RS00715 PF02814 UreE urease accessory protein, N-terminal domain APS40_RS00715 PF05194 UreE urease accessory protein, C-terminal domain APS40_RS00720 PF01730 UreF APS40_RS00730 PF02492 CobW/HypB/UreG, nucleotide-binding domain APS40_RS00735 PF13673 Acetyltransferase (GNAT) domain APS40_RS00735 PF00583 Acetyltransferase (GNAT) family APS40_RS00740 PF00128 Alpha amylase, catalytic domain APS40_RS00740 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS40_RS00745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS40_RS00745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS40_RS00745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS40_RS00745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS40_RS00750 PF00534 Glycosyl transferases group 1 APS40_RS00750 PF08323 Starch synthase catalytic domain APS40_RS00755 PF00483 Nucleotidyl transferase APS40_RS00760 PF00128 Alpha amylase, catalytic domain APS40_RS00760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS40_RS00760 PF02806 Alpha amylase, C-terminal all-beta domain APS40_RS00765 PF00343 Carbohydrate phosphorylase APS40_RS00770 PF00999 Sodium/hydrogen exchanger family APS40_RS00770 PF02254 TrkA-N domain APS40_RS00775 PF01594 AI-2E family transporter APS40_RS00780 PF01156 Inosine-uridine preferring nucleoside hydrolase APS40_RS00790 PF00211 Adenylate and Guanylate cyclase catalytic domain APS40_RS00800 PF01810 LysE type translocator APS40_RS00805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS40_RS00805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS40_RS00805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS40_RS00805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS40_RS00815 PF02245 Methylpurine-DNA glycosylase (MPG) APS40_RS00845 PF00171 Aldehyde dehydrogenase family APS40_RS00855 PF04402 Protein of unknown function (DUF541) APS40_RS00870 PF04226 Transglycosylase associated protein APS40_RS00880 PF01925 Sulfite exporter TauE/SafE APS40_RS00885 PF01389 OmpA-like transmembrane domain APS40_RS00885 PF00691 OmpA family APS40_RS00890 PF03350 Uncharacterized protein family, UPF0114 APS40_RS00940 PF04545 Sigma-70, region 4 APS40_RS00940 PF04539 Sigma-70 region 3 APS40_RS00940 PF04542 Sigma-70 region 2 APS40_RS00940 PF00140 Sigma-70 factor, region 1.2 APS40_RS00940 PF03979 Sigma-70 factor, region 1.1 APS40_RS00940 PF04546 Sigma-70, non-essential region APS40_RS00945 PF01807 CHC2 zinc finger APS40_RS00945 PF10410 DnaB-helicase binding domain of primase APS40_RS00945 PF08278 DNA primase DnaG DnaB-binding APS40_RS00945 PF08275 DNA primase catalytic core, N-terminal domain APS40_RS00945 PF13662 Toprim domain APS40_RS00950 PF03631 Virulence factor BrkB APS40_RS00965 PF07690 Major Facilitator Superfamily APS40_RS00970 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS00970 PF17151 Periplasmic sensor domain APS40_RS00985 PF00117 Glutamine amidotransferase class-I APS40_RS00985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APS40_RS01000 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS01000 PF08448 PAS fold APS40_RS01010 PF04228 Putative neutral zinc metallopeptidase APS40_RS01015 PF00149 Calcineurin-like phosphoesterase APS40_RS01015 PF02872 5'-nucleotidase, C-terminal domain APS40_RS01030 PF00005 ABC transporter APS40_RS01030 PF13732 Domain of unknown function (DUF4162) APS40_RS01040 PF07690 Major Facilitator Superfamily APS40_RS01050 PF07690 Major Facilitator Superfamily APS40_RS01095 PF02617 ATP-dependent Clp protease adaptor protein ClpS APS40_RS01115 PF03358 NADPH-dependent FMN reductase APS40_RS01135 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS40_RS01135 PF02142 MGS-like domain APS40_RS01135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS40_RS01145 PF00132 Bacterial transferase hexapeptide (six repeats) APS40_RS01155 PF00892 EamA-like transporter family APS40_RS01165 PF08241 Methyltransferase domain APS40_RS01170 PF00313 'Cold-shock' DNA-binding domain APS40_RS01180 PF00440 Bacterial regulatory proteins, tetR family APS40_RS01185 PF03449 Transcription elongation factor, N-terminal APS40_RS01185 PF01272 Transcription elongation factor, GreA/GreB, C-term APS40_RS01190 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS01195 PF03466 LysR substrate binding domain APS40_RS01200 PF00583 Acetyltransferase (GNAT) family APS40_RS01210 PF01544 CorA-like Mg2+ transporter protein APS40_RS01215 PF00248 Aldo/keto reductase family APS40_RS01225 PF04480 Protein of unknown function (DUF559) APS40_RS01235 PF00155 Aminotransferase class I and II APS40_RS01255 PF00478 IMP dehydrogenase / GMP reductase domain APS40_RS01255 PF00571 CBS domain APS40_RS01260 PF13505 Outer membrane protein beta-barrel domain APS40_RS01270 PF00266 Aminotransferase class-V APS40_RS01275 PF03796 DnaB-like helicase C terminal domain APS40_RS01295 PF00265 Thymidine kinase APS40_RS01300 PF03061 Thioesterase superfamily APS40_RS01325 PF00472 RF-1 domain APS40_RS01340 PF01255 Putative undecaprenyl diphosphate synthase APS40_RS01360 PF07690 Major Facilitator Superfamily APS40_RS01365 PF02151 UvrB/uvrC motif APS40_RS01365 PF17757 UvrB interaction domain APS40_RS01365 PF00271 Helicase conserved C-terminal domain APS40_RS01365 PF04851 Type III restriction enzyme, res subunit APS40_RS01365 PF12344 Ultra-violet resistance protein B APS40_RS01455 PF00106 short chain dehydrogenase APS40_RS01460 PF12826 Helix-hairpin-helix motif APS40_RS01460 PF01541 GIY-YIG catalytic domain APS40_RS01460 PF08459 UvrC Helix-hairpin-helix N-terminal APS40_RS01460 PF02151 UvrB/uvrC motif APS40_RS01470 PF07690 Major Facilitator Superfamily APS40_RS01480 PF00793 DAHP synthetase I family APS40_RS01490 PF01066 CDP-alcohol phosphatidyltransferase APS40_RS01500 PF02391 MoaE protein APS40_RS01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS01515 PF03466 LysR substrate binding domain APS40_RS01520 PF07690 Major Facilitator Superfamily APS40_RS01525 PF00248 Aldo/keto reductase family APS40_RS01530 PF01063 Amino-transferase class IV APS40_RS01535 PF12802 MarR family APS40_RS01540 PF01588 Putative tRNA binding domain APS40_RS01545 PF03807 NADP oxidoreductase coenzyme F420-dependent APS40_RS01545 PF14748 Pyrroline-5-carboxylate reductase dimerisation APS40_RS01570 PF01790 Prolipoprotein diacylglyceryl transferase APS40_RS01580 PF02578 Multi-copper polyphenol oxidoreductase laccase APS40_RS01585 PF00665 Integrase core domain APS40_RS01590 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APS40_RS01590 PF14572 Phosphoribosyl synthetase-associated domain APS40_RS01595 PF03795 YCII-related domain APS40_RS01600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS40_RS01610 PF03795 YCII-related domain APS40_RS01615 PF08281 Sigma-70, region 4 APS40_RS01615 PF04542 Sigma-70 region 2 APS40_RS01620 PF01386 Ribosomal L25p family APS40_RS01620 PF14693 Ribosomal protein TL5, C-terminal domain APS40_RS01625 PF01195 Peptidyl-tRNA hydrolase APS40_RS01630 PF00665 Integrase core domain APS40_RS01630 PF13936 Helix-turn-helix domain APS40_RS01635 PF01926 50S ribosome-binding GTPase APS40_RS01635 PF06071 Protein of unknown function (DUF933) APS40_RS01650 PF01575 MaoC like domain APS40_RS01660 PF00156 Phosphoribosyl transferase domain APS40_RS01670 PF00033 Cytochrome b/b6/petB APS40_RS01670 PF02167 Cytochrome C1 family APS40_RS01670 PF00032 Cytochrome b(C-terminal)/b6/petD APS40_RS01675 PF02167 Cytochrome C1 family APS40_RS01675 PF00032 Cytochrome b(C-terminal)/b6/petD APS40_RS01675 PF00033 Cytochrome b/b6/petB APS40_RS01680 PF00355 Rieske [2Fe-2S] domain APS40_RS01680 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal APS40_RS01685 PF00588 SpoU rRNA Methylase family APS40_RS01690 PF01218 Coproporphyrinogen III oxidase APS40_RS01715 PF00293 NUDIX domain APS40_RS01740 PF00293 NUDIX domain APS40_RS01755 PF08245 Mur ligase middle domain APS40_RS01755 PF02875 Mur ligase family, glutamate ligase domain APS40_RS01760 PF00893 Small Multidrug Resistance protein APS40_RS01765 PF00107 Zinc-binding dehydrogenase APS40_RS01795 PF09278 MerR, DNA binding APS40_RS01795 PF00376 MerR family regulatory protein APS40_RS01810 PF00107 Zinc-binding dehydrogenase APS40_RS01810 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS01815 PF00005 ABC transporter APS40_RS01820 PF02653 Branched-chain amino acid transport system / permease component APS40_RS01825 PF13407 Periplasmic binding protein domain APS40_RS01835 PF08448 PAS fold APS40_RS01835 PF08447 PAS fold APS40_RS01835 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS01835 PF00563 EAL domain APS40_RS01840 PF04480 Protein of unknown function (DUF559) APS40_RS01850 PF01979 Amidohydrolase family APS40_RS01850 PF13382 Adenine deaminase C-terminal domain APS40_RS01860 PF01274 Malate synthase APS40_RS01865 PF01979 Amidohydrolase family APS40_RS01875 PF02608 ABC transporter substrate-binding protein PnrA-like APS40_RS01880 PF02653 Branched-chain amino acid transport system / permease component APS40_RS01885 PF02653 Branched-chain amino acid transport system / permease component APS40_RS01890 PF00005 ABC transporter APS40_RS01905 PF01799 [2Fe-2S] binding domain APS40_RS01905 PF00111 2Fe-2S iron-sulfur cluster binding domain APS40_RS01910 PF00576 HIUase/Transthyretin family APS40_RS01915 PF01014 Uricase APS40_RS01915 PF09349 OHCU decarboxylase APS40_RS01920 PF01022 Bacterial regulatory protein, arsR family APS40_RS01935 PF00144 Beta-lactamase APS40_RS01970 PF01965 DJ-1/PfpI family APS40_RS01975 PF05899 Protein of unknown function (DUF861) APS40_RS01975 PF07883 Cupin domain APS40_RS01990 PF04115 Ureidoglycolate lyase APS40_RS02010 PF00271 Helicase conserved C-terminal domain APS40_RS02010 PF00270 DEAD/DEAH box helicase APS40_RS02025 PF00174 Oxidoreductase molybdopterin binding domain APS40_RS02040 PF04545 Sigma-70, region 4 APS40_RS02040 PF04542 Sigma-70 region 2 APS40_RS02055 PF00149 Calcineurin-like phosphoesterase APS40_RS02055 PF02872 5'-nucleotidase, C-terminal domain APS40_RS02070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS02070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS02075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS02075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS02085 PF08402 TOBE domain APS40_RS02085 PF00005 ABC transporter APS40_RS02090 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02095 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02100 PF01547 Bacterial extracellular solute-binding protein APS40_RS02105 PF00356 Bacterial regulatory proteins, lacI family APS40_RS02140 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02150 PF00005 ABC transporter APS40_RS02150 PF08402 TOBE domain APS40_RS02155 PF00581 Rhodanese-like domain APS40_RS02170 PF02653 Branched-chain amino acid transport system / permease component APS40_RS02175 PF00005 ABC transporter APS40_RS02180 PF13407 Periplasmic binding protein domain APS40_RS02185 PF07729 FCD domain APS40_RS02185 PF00392 Bacterial regulatory proteins, gntR family APS40_RS02190 PF00171 Aldehyde dehydrogenase family APS40_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02200 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02205 PF00005 ABC transporter APS40_RS02205 PF08402 TOBE domain APS40_RS02210 PF13416 Bacterial extracellular solute-binding protein APS40_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS02215 PF03466 LysR substrate binding domain APS40_RS02240 PF04168 A predicted alpha-helical domain with a conserved ER motif. APS40_RS02240 PF14403 Circularly permuted ATP-grasp type 2 APS40_RS02245 PF08379 Bacterial transglutaminase-like N-terminal region APS40_RS02245 PF01841 Transglutaminase-like superfamily APS40_RS02265 PF00781 Diacylglycerol kinase catalytic domain APS40_RS02270 PF07568 Histidine kinase APS40_RS02270 PF13581 Histidine kinase-like ATPase domain APS40_RS02270 PF13426 PAS domain APS40_RS02285 PF04542 Sigma-70 region 2 APS40_RS02285 PF08281 Sigma-70, region 4 APS40_RS02295 PF00072 Response regulator receiver domain APS40_RS02310 PF00005 ABC transporter APS40_RS02315 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS40_RS02320 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02325 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02340 PF03786 D-mannonate dehydratase (UxuA) APS40_RS02345 PF07729 FCD domain APS40_RS02345 PF00392 Bacterial regulatory proteins, gntR family APS40_RS02350 PF00465 Iron-containing alcohol dehydrogenase APS40_RS02360 PF03458 UPF0126 domain APS40_RS02375 PF01370 NAD dependent epimerase/dehydratase family APS40_RS02390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS02390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS02395 PF17926 Tetracyclin repressor-like, C-terminal domain APS40_RS02395 PF00440 Bacterial regulatory proteins, tetR family APS40_RS02400 PF13416 Bacterial extracellular solute-binding protein APS40_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02410 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS02425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS02430 PF00005 ABC transporter APS40_RS02430 PF17912 MalK OB fold domain APS40_RS02430 PF03459 TOBE domain APS40_RS02435 PF18327 Proline utilization A proline dehydrogenase N-terminal domain APS40_RS02435 PF14850 DNA-binding domain of Proline dehydrogenase APS40_RS02435 PF01619 Proline dehydrogenase APS40_RS02435 PF00171 Aldehyde dehydrogenase family APS40_RS02445 PF01872 RibD C-terminal domain APS40_RS02455 PF04773 FecR protein APS40_RS02460 PF00248 Aldo/keto reductase family APS40_RS02465 PF00664 ABC transporter transmembrane region APS40_RS02465 PF00005 ABC transporter APS40_RS02470 PF00005 ABC transporter APS40_RS02470 PF00664 ABC transporter transmembrane region APS40_RS02485 PF00486 Transcriptional regulatory protein, C terminal APS40_RS02485 PF00072 Response regulator receiver domain APS40_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS02515 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02520 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02530 PF07729 FCD domain APS40_RS02530 PF00392 Bacterial regulatory proteins, gntR family APS40_RS02540 PF09370 Phosphoenolpyruvate hydrolase-like APS40_RS02545 PF01869 BadF/BadG/BcrA/BcrD ATPase family APS40_RS02555 PF00293 NUDIX domain APS40_RS02565 PF00005 ABC transporter APS40_RS02570 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02600 PF06965 Na+/H+ antiporter 1 APS40_RS02605 PF03033 Glycosyltransferase family 28 N-terminal domain APS40_RS02615 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS02620 PF00005 ABC transporter APS40_RS02620 PF00571 CBS domain APS40_RS02625 PF00582 Universal stress protein family APS40_RS02635 PF05175 Methyltransferase small domain APS40_RS02635 PF08468 Methyltransferase small domain N-terminal APS40_RS02645 PF00005 ABC transporter APS40_RS02665 PF13360 PQQ-like domain APS40_RS02665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS40_RS02685 PF01384 Phosphate transporter family APS40_RS02690 PF01865 Protein of unknown function DUF47 APS40_RS02700 PF02397 Bacterial sugar transferase APS40_RS02715 PF00248 Aldo/keto reductase family APS40_RS02755 PF00011 Hsp20/alpha crystallin family APS40_RS02780 PF13188 PAS domain APS40_RS02780 PF08448 PAS fold APS40_RS02780 PF00072 Response regulator receiver domain APS40_RS02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS02780 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS02785 PF00781 Diacylglycerol kinase catalytic domain APS40_RS02795 PF00313 'Cold-shock' DNA-binding domain APS40_RS02810 PF01165 Ribosomal protein S21 APS40_RS02850 PF07536 HWE histidine kinase APS40_RS02850 PF13426 PAS domain APS40_RS02850 PF13581 Histidine kinase-like ATPase domain APS40_RS02855 PF13545 Crp-like helix-turn-helix domain APS40_RS02855 PF00027 Cyclic nucleotide-binding domain APS40_RS02860 PF05974 Domain of unknown function (DUF892) APS40_RS02870 PF11941 Domain of unknown function (DUF3459) APS40_RS02870 PF00128 Alpha amylase, catalytic domain APS40_RS02870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS40_RS02880 PF13439 Glycosyltransferase Family 4 APS40_RS02895 PF02350 UDP-N-acetylglucosamine 2-epimerase APS40_RS02900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS40_RS02900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APS40_RS02900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS40_RS02905 PF03808 Glycosyl transferase WecB/TagA/CpsF family APS40_RS02915 PF13439 Glycosyltransferase Family 4 APS40_RS02960 PF13505 Outer membrane protein beta-barrel domain APS40_RS03015 PF04679 ATP dependent DNA ligase C terminal region APS40_RS03015 PF01068 ATP dependent DNA ligase domain APS40_RS03015 PF13298 DNA polymerase Ligase (LigD) APS40_RS03040 PF00756 Putative esterase APS40_RS03045 PF00118 TCP-1/cpn60 chaperonin family APS40_RS03050 PF00166 Chaperonin 10 Kd subunit APS40_RS03055 PF06233 Usg-like family APS40_RS03060 PF00011 Hsp20/alpha crystallin family APS40_RS03075 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) APS40_RS03085 PF01979 Amidohydrolase family APS40_RS03090 PF01979 Amidohydrolase family APS40_RS03105 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03110 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03115 PF01547 Bacterial extracellular solute-binding protein APS40_RS03120 PF00005 ABC transporter APS40_RS03120 PF17912 MalK OB fold domain APS40_RS03120 PF03459 TOBE domain APS40_RS03135 PF00005 ABC transporter APS40_RS03135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS03140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS03140 PF00005 ABC transporter APS40_RS03145 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03145 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS03150 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS03160 PF01177 Asp/Glu/Hydantoin racemase APS40_RS03165 PF00682 HMGL-like APS40_RS03170 PF07690 Major Facilitator Superfamily APS40_RS03190 PF13755 Sensor N-terminal transmembrane domain APS40_RS03190 PF00672 HAMP domain APS40_RS03190 PF13756 Stimulus-sensing domain APS40_RS03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS03190 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS03205 PF04116 Fatty acid hydroxylase superfamily APS40_RS03215 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03220 PF02653 Branched-chain amino acid transport system / permease component APS40_RS03225 PF00005 ABC transporter APS40_RS03240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS03240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS03245 PF00356 Bacterial regulatory proteins, lacI family APS40_RS03250 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03255 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03275 PF00356 Bacterial regulatory proteins, lacI family APS40_RS03280 PF00005 ABC transporter APS40_RS03280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS03285 PF00005 ABC transporter APS40_RS03285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS03290 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03295 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03305 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain APS40_RS03305 PF04616 Glycosyl hydrolases family 43 APS40_RS03310 PF13581 Histidine kinase-like ATPase domain APS40_RS03310 PF13426 PAS domain APS40_RS03310 PF07536 HWE histidine kinase APS40_RS03315 PF17674 HHH domain APS40_RS03315 PF09371 Tex-like protein N-terminal domain APS40_RS03315 PF00575 S1 RNA binding domain APS40_RS03315 PF16921 Tex protein YqgF-like domain APS40_RS03335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS03340 PF01321 Creatinase/Prolidase N-terminal domain APS40_RS03340 PF00557 Metallopeptidase family M24 APS40_RS03345 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03350 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03350 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS03360 PF00005 ABC transporter APS40_RS03360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS03365 PF00005 ABC transporter APS40_RS03365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS03370 PF01979 Amidohydrolase family APS40_RS03375 PF01272 Transcription elongation factor, GreA/GreB, C-term APS40_RS03375 PF03449 Transcription elongation factor, N-terminal APS40_RS03385 PF13439 Glycosyltransferase Family 4 APS40_RS03390 PF16363 GDP-mannose 4,6 dehydratase APS40_RS03405 PF03275 UDP-galactopyranose mutase APS40_RS03410 PF00535 Glycosyl transferase family 2 APS40_RS03445 PF01040 UbiA prenyltransferase family APS40_RS03450 PF13360 PQQ-like domain APS40_RS03455 PF00034 Cytochrome c APS40_RS03470 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS40_RS03475 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APS40_RS03475 PF02790 Cytochrome C oxidase subunit II, transmembrane domain APS40_RS03475 PF00034 Cytochrome c APS40_RS03480 PF01292 Prokaryotic cytochrome b561 APS40_RS03505 PF00196 Bacterial regulatory proteins, luxR family APS40_RS03510 PF13416 Bacterial extracellular solute-binding protein APS40_RS03520 PF13378 Enolase C-terminal domain-like APS40_RS03520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS03525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS03525 PF13378 Enolase C-terminal domain-like APS40_RS03530 PF01869 BadF/BadG/BcrA/BcrD ATPase family APS40_RS03535 PF17912 MalK OB fold domain APS40_RS03535 PF00005 ABC transporter APS40_RS03540 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03545 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03560 PF00480 ROK family APS40_RS03565 PF00005 ABC transporter APS40_RS03565 PF00664 ABC transporter transmembrane region APS40_RS03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS03580 PF08521 Two-component sensor kinase N-terminal APS40_RS03580 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS03585 PF00486 Transcriptional regulatory protein, C terminal APS40_RS03585 PF00072 Response regulator receiver domain APS40_RS03595 PF03471 Transporter associated domain APS40_RS03595 PF03741 Integral membrane protein TerC family APS40_RS03605 PF03795 YCII-related domain APS40_RS03615 PF00892 EamA-like transporter family APS40_RS03620 PF00392 Bacterial regulatory proteins, gntR family APS40_RS03620 PF00155 Aminotransferase class I and II APS40_RS03670 PF00308 Bacterial dnaA protein APS40_RS03670 PF11638 DnaA N-terminal domain APS40_RS03670 PF08299 Bacterial dnaA protein helix-turn-helix APS40_RS03690 PF00467 KOW motif APS40_RS03690 PF02357 Transcription termination factor nusG APS40_RS03695 PF01022 Bacterial regulatory protein, arsR family APS40_RS03725 PF03466 LysR substrate binding domain APS40_RS03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS03770 PF13416 Bacterial extracellular solute-binding protein APS40_RS03775 PF00480 ROK family APS40_RS03780 PF07364 Metallopeptidase family M81 APS40_RS03780 PF07171 MlrC C-terminus APS40_RS03785 PF00005 ABC transporter APS40_RS03785 PF08402 TOBE domain APS40_RS03825 PF00313 'Cold-shock' DNA-binding domain APS40_RS03840 PF01165 Ribosomal protein S21 APS40_RS03885 PF00313 'Cold-shock' DNA-binding domain APS40_RS03905 PF02538 Hydantoinase B/oxoprolinase APS40_RS03910 PF01968 Hydantoinase/oxoprolinase APS40_RS03910 PF05378 Hydantoinase/oxoprolinase N-terminal region APS40_RS03915 PF02653 Branched-chain amino acid transport system / permease component APS40_RS03920 PF00005 ABC transporter APS40_RS03935 PF01979 Amidohydrolase family APS40_RS03940 PF07687 Peptidase dimerisation domain APS40_RS03940 PF01546 Peptidase family M20/M25/M40 APS40_RS03945 PF00701 Dihydrodipicolinate synthetase family APS40_RS03955 PF00106 short chain dehydrogenase APS40_RS03960 PF07859 alpha/beta hydrolase fold APS40_RS03970 PF12833 Helix-turn-helix domain APS40_RS03970 PF06719 AraC-type transcriptional regulator N-terminus APS40_RS03975 PF01636 Phosphotransferase enzyme family APS40_RS03985 PF03466 LysR substrate binding domain APS40_RS03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS03990 PF01641 SelR domain APS40_RS03995 PF00294 pfkB family carbohydrate kinase APS40_RS04000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS04005 PF00072 Response regulator receiver domain APS40_RS04005 PF00196 Bacterial regulatory proteins, luxR family APS40_RS04200 PF00486 Transcriptional regulatory protein, C terminal APS40_RS04200 PF00072 Response regulator receiver domain APS40_RS04205 PF00672 HAMP domain APS40_RS04205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS04205 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS04220 PF02687 FtsX-like permease family APS40_RS04220 PF12704 MacB-like periplasmic core domain APS40_RS04220 PF00005 ABC transporter APS40_RS04225 PF02687 FtsX-like permease family APS40_RS04225 PF00005 ABC transporter APS40_RS04225 PF12704 MacB-like periplasmic core domain APS40_RS04235 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04240 PF00005 ABC transporter APS40_RS04245 PF07687 Peptidase dimerisation domain APS40_RS04245 PF01546 Peptidase family M20/M25/M40 APS40_RS04265 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04270 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04285 PF00294 pfkB family carbohydrate kinase APS40_RS04290 PF02056 Family 4 glycosyl hydrolase APS40_RS04290 PF11975 Family 4 glycosyl hydrolase C-terminal domain APS40_RS04295 PF07702 UTRA domain APS40_RS04295 PF00392 Bacterial regulatory proteins, gntR family APS40_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04310 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04325 PF00356 Bacterial regulatory proteins, lacI family APS40_RS04330 PF00248 Aldo/keto reductase family APS40_RS04335 PF00480 ROK family APS40_RS04340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS40_RS04340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS40_RS04345 PF00005 ABC transporter APS40_RS04345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS04350 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04350 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS04370 PF00701 Dihydrodipicolinate synthetase family APS40_RS04375 PF07729 FCD domain APS40_RS04375 PF00392 Bacterial regulatory proteins, gntR family APS40_RS04380 PF00561 alpha/beta hydrolase fold APS40_RS04385 PF00196 Bacterial regulatory proteins, luxR family APS40_RS04385 PF00072 Response regulator receiver domain APS40_RS04390 PF07730 Histidine kinase APS40_RS04390 PF17200 Single Cache domain 2 APS40_RS04395 PF01979 Amidohydrolase family APS40_RS04410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS04410 PF00005 ABC transporter APS40_RS04415 PF00005 ABC transporter APS40_RS04415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04420 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS04425 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04435 PF02585 GlcNAc-PI de-N-acetylase APS40_RS04445 PF00005 ABC transporter APS40_RS04445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS04450 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04450 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS04455 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS04465 PF00480 ROK family APS40_RS04485 PF01370 NAD dependent epimerase/dehydratase family APS40_RS04490 PF00005 ABC transporter APS40_RS04490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04495 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS04500 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS04510 PF00701 Dihydrodipicolinate synthetase family APS40_RS04515 PF03786 D-mannonate dehydratase (UxuA) APS40_RS04520 PF00392 Bacterial regulatory proteins, gntR family APS40_RS04520 PF07729 FCD domain APS40_RS04535 PF01425 Amidase APS40_RS04540 PF00392 Bacterial regulatory proteins, gntR family APS40_RS04540 PF07729 FCD domain APS40_RS04550 PF00857 Isochorismatase family APS40_RS04560 PF00005 ABC transporter APS40_RS04565 PF00857 Isochorismatase family APS40_RS04570 PF02653 Branched-chain amino acid transport system / permease component APS40_RS04585 PF00355 Rieske [2Fe-2S] domain APS40_RS04585 PF00111 2Fe-2S iron-sulfur cluster binding domain APS40_RS04595 PF02798 Glutathione S-transferase, N-terminal domain APS40_RS04595 PF00043 Glutathione S-transferase, C-terminal domain APS40_RS04600 PF04480 Protein of unknown function (DUF559) APS40_RS04610 PF00356 Bacterial regulatory proteins, lacI family APS40_RS04615 PF02608 ABC transporter substrate-binding protein PnrA-like APS40_RS04620 PF00005 ABC transporter APS40_RS04625 PF02653 Branched-chain amino acid transport system / permease component APS40_RS04630 PF02653 Branched-chain amino acid transport system / permease component APS40_RS04665 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS40_RS04670 PF03992 Antibiotic biosynthesis monooxygenase APS40_RS04675 PF01614 Bacterial transcriptional regulator APS40_RS04675 PF09339 IclR helix-turn-helix domain APS40_RS04680 PF00296 Luciferase-like monooxygenase APS40_RS04685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS40_RS04685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS40_RS04690 PF00171 Aldehyde dehydrogenase family APS40_RS04700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS04700 PF13378 Enolase C-terminal domain-like APS40_RS04710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS04710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04745 PF00005 ABC transporter APS40_RS04750 PF02653 Branched-chain amino acid transport system / permease component APS40_RS04765 PF07729 FCD domain APS40_RS04765 PF00392 Bacterial regulatory proteins, gntR family APS40_RS04770 PF02625 XdhC and CoxI family APS40_RS04770 PF13478 XdhC Rossmann domain APS40_RS04775 PF12804 MobA-like NTP transferase domain APS40_RS04780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APS40_RS04780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS40_RS04785 PF00941 FAD binding domain in molybdopterin dehydrogenase APS40_RS04785 PF03450 CO dehydrogenase flavoprotein C-terminal domain APS40_RS04790 PF01799 [2Fe-2S] binding domain APS40_RS04790 PF00111 2Fe-2S iron-sulfur cluster binding domain APS40_RS04790 PF10518 TAT (twin-arginine translocation) pathway signal sequence APS40_RS04805 PF01380 SIS domain APS40_RS04810 PF08013 Tagatose 6 phosphate kinase APS40_RS04815 PF00291 Pyridoxal-phosphate dependent enzyme APS40_RS04820 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family APS40_RS04825 PF01614 Bacterial transcriptional regulator APS40_RS04825 PF09339 IclR helix-turn-helix domain APS40_RS04830 PF05336 L-rhamnose mutarotase APS40_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04845 PF13416 Bacterial extracellular solute-binding protein APS40_RS04865 PF00356 Bacterial regulatory proteins, lacI family APS40_RS04870 PF00920 Dehydratase family APS40_RS04875 PF03737 Aldolase/RraA APS40_RS04875 PF00180 Isocitrate/isopropylmalate dehydrogenase APS40_RS04880 PF02653 Branched-chain amino acid transport system / permease component APS40_RS04890 PF00005 ABC transporter APS40_RS04900 PF00355 Rieske [2Fe-2S] domain APS40_RS04905 PF14759 Reductase C-terminal APS40_RS04905 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS04920 PF05336 L-rhamnose mutarotase APS40_RS04925 PF04909 Amidohydrolase APS40_RS04930 PF13378 Enolase C-terminal domain-like APS40_RS04930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS04935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04950 PF00005 ABC transporter APS40_RS04950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS04955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS04955 PF00005 ABC transporter APS40_RS04960 PF00248 Aldo/keto reductase family APS40_RS04970 PF17912 MalK OB fold domain APS40_RS04970 PF00005 ABC transporter APS40_RS04980 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS04995 PF00356 Bacterial regulatory proteins, lacI family APS40_RS05005 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05020 PF13406 Transglycosylase SLT domain APS40_RS05025 PF00356 Bacterial regulatory proteins, lacI family APS40_RS05030 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 APS40_RS05030 PF16355 Domain of unknown function (DUF4982) APS40_RS05030 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APS40_RS05030 PF00703 Glycosyl hydrolases family 2 APS40_RS05030 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS40_RS05035 PF17151 Periplasmic sensor domain APS40_RS05035 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS05040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS05055 PF00005 ABC transporter APS40_RS05060 PF00005 ABC transporter APS40_RS05060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS05065 PF03786 D-mannonate dehydratase (UxuA) APS40_RS05075 PF07995 Glucose / Sorbosone dehydrogenase APS40_RS05080 PF06832 Penicillin-Binding Protein C-terminus Family APS40_RS05080 PF00912 Transglycosylase APS40_RS05080 PF00905 Penicillin binding protein transpeptidase domain APS40_RS05085 PF00207 Alpha-2-macroglobulin family APS40_RS05085 PF01835 MG2 domain APS40_RS05085 PF07703 Alpha-2-macroglobulin bait region domain APS40_RS05085 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain APS40_RS05085 PF17962 Bacterial macroglobulin domain 6 APS40_RS05085 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain APS40_RS05085 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain APS40_RS05085 PF11974 Bacterial alpha-2-macroglobulin MG3 domain APS40_RS05090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS40_RS05090 PF00384 Molybdopterin oxidoreductase APS40_RS05090 PF04324 BFD-like [2Fe-2S] binding domain APS40_RS05090 PF01568 Molydopterin dinucleotide binding domain APS40_RS05095 PF00355 Rieske [2Fe-2S] domain APS40_RS05100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS40_RS05100 PF18267 Rubredoxin NAD+ reductase C-terminal domain APS40_RS05100 PF04324 BFD-like [2Fe-2S] binding domain APS40_RS05100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS40_RS05100 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS05105 PF00005 ABC transporter APS40_RS05110 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05120 PF00005 ABC transporter APS40_RS05125 PF00072 Response regulator receiver domain APS40_RS05125 PF00486 Transcriptional regulatory protein, C terminal APS40_RS05135 PF00005 ABC transporter APS40_RS05145 PF02653 Branched-chain amino acid transport system / permease component APS40_RS05165 PF00583 Acetyltransferase (GNAT) family APS40_RS05170 PF07555 beta-N-acetylglucosaminidase APS40_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05180 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05190 PF07702 UTRA domain APS40_RS05190 PF00392 Bacterial regulatory proteins, gntR family APS40_RS05195 PF13580 SIS domain APS40_RS05210 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain APS40_RS05210 PF09297 NADH pyrophosphatase zinc ribbon domain APS40_RS05210 PF00293 NUDIX domain APS40_RS05225 PF01209 ubiE/COQ5 methyltransferase family APS40_RS05235 PF01032 FecCD transport family APS40_RS05240 PF00005 ABC transporter APS40_RS05250 PF02798 Glutathione S-transferase, N-terminal domain APS40_RS05255 PF04055 Radical SAM superfamily APS40_RS05255 PF12544 Lysine-2,3-aminomutase APS40_RS05260 PF00152 tRNA synthetases class II (D, K and N) APS40_RS05265 PF09285 Elongation factor P, C-terminal APS40_RS05265 PF01132 Elongation factor P (EF-P) OB domain APS40_RS05265 PF08207 Elongation factor P (EF-P) KOW-like domain APS40_RS05285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS40_RS05290 PF12450 von Willebrand factor APS40_RS05290 PF00092 von Willebrand factor type A domain APS40_RS05290 PF12034 Domain of unknown function (DUF3520) APS40_RS05295 PF08281 Sigma-70, region 4 APS40_RS05295 PF04542 Sigma-70 region 2 APS40_RS05325 PF13417 Glutathione S-transferase, N-terminal domain APS40_RS05325 PF00043 Glutathione S-transferase, C-terminal domain APS40_RS05330 PF08345 Flagellar M-ring protein C-terminal APS40_RS05330 PF01514 Secretory protein of YscJ/FliF family APS40_RS05335 PF14841 FliG middle domain APS40_RS05335 PF01706 FliG C-terminal domain APS40_RS05335 PF14842 FliG N-terminal domain APS40_RS05345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS40_RS05350 PF00158 Sigma-54 interaction domain APS40_RS05350 PF02954 Bacterial regulatory protein, Fis family APS40_RS05355 PF00771 FHIPEP family APS40_RS05360 PF15887 Putative zinc-binding metallo-peptidase APS40_RS05360 PF10005 zinc-ribbon domain APS40_RS05365 PF13673 Acetyltransferase (GNAT) domain APS40_RS05385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS40_RS05385 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS40_RS05385 PF18269 T3SS EscN ATPase C-terminal domain APS40_RS05390 PF00486 Transcriptional regulatory protein, C terminal APS40_RS05390 PF00072 Response regulator receiver domain APS40_RS05400 PF12951 Passenger-associated-transport-repeat APS40_RS05405 PF00072 Response regulator receiver domain APS40_RS05410 PF10090 Histidine phosphotransferase C-terminal domain APS40_RS05435 PF00849 RNA pseudouridylate synthase APS40_RS05440 PF04545 Sigma-70, region 4 APS40_RS05440 PF00140 Sigma-70 factor, region 1.2 APS40_RS05440 PF04542 Sigma-70 region 2 APS40_RS05445 PF00905 Penicillin binding protein transpeptidase domain APS40_RS05455 PF01547 Bacterial extracellular solute-binding protein APS40_RS05460 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05465 PF00005 ABC transporter APS40_RS05470 PF13936 Helix-turn-helix domain APS40_RS05470 PF00665 Integrase core domain APS40_RS05475 PF14602 Hexapeptide repeat of succinyl-transferase APS40_RS05475 PF12464 Maltose acetyltransferase APS40_RS05485 PF00709 Adenylosuccinate synthetase APS40_RS05490 PF01565 FAD binding domain APS40_RS05490 PF08031 Berberine and berberine like APS40_RS05495 PF08031 Berberine and berberine like APS40_RS05495 PF01565 FAD binding domain APS40_RS05520 PF06441 Epoxide hydrolase N terminus APS40_RS05525 PF00665 Integrase core domain APS40_RS05525 PF13936 Helix-turn-helix domain APS40_RS05530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS40_RS05530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS40_RS05530 PF01842 ACT domain APS40_RS05535 PF00266 Aminotransferase class-V APS40_RS05555 PF13360 PQQ-like domain APS40_RS05555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS40_RS05590 PF03358 NADPH-dependent FMN reductase APS40_RS05610 PF13407 Periplasmic binding protein domain APS40_RS05615 PF02653 Branched-chain amino acid transport system / permease component APS40_RS05620 PF00005 ABC transporter APS40_RS05625 PF00356 Bacterial regulatory proteins, lacI family APS40_RS05635 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05640 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05655 PF17912 MalK OB fold domain APS40_RS05655 PF00005 ABC transporter APS40_RS05660 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05665 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS05675 PF00356 Bacterial regulatory proteins, lacI family APS40_RS05690 PF00317 Ribonucleotide reductase, all-alpha domain APS40_RS05690 PF03477 ATP cone domain APS40_RS05690 PF02867 Ribonucleotide reductase, barrel domain APS40_RS05700 PF00392 Bacterial regulatory proteins, gntR family APS40_RS05700 PF07729 FCD domain APS40_RS05725 PF00501 AMP-binding enzyme APS40_RS05725 PF13193 AMP-binding enzyme C-terminal domain APS40_RS05730 PF02803 Thiolase, C-terminal domain APS40_RS05730 PF00108 Thiolase, N-terminal domain APS40_RS05735 PF05443 ROS/MUCR transcriptional regulator protein APS40_RS05750 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding APS40_RS05760 PF06233 Usg-like family APS40_RS05795 PF00580 UvrD/REP helicase N-terminal domain APS40_RS05795 PF13361 UvrD-like helicase C-terminal domain APS40_RS05810 PF02530 Porin subfamily APS40_RS05820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS40_RS05820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS40_RS05820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS40_RS05820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS40_RS05825 PF08241 Methyltransferase domain APS40_RS05830 PF00004 ATPase family associated with various cellular activities (AAA) APS40_RS05830 PF06480 FtsH Extracellular APS40_RS05830 PF01434 Peptidase family M41 APS40_RS05830 PF17862 AAA+ lid domain APS40_RS05835 PF01171 PP-loop family APS40_RS05845 PF00691 OmpA family APS40_RS05850 PF07676 WD40-like Beta Propeller Repeat APS40_RS05850 PF04052 TolB amino-terminal domain APS40_RS05860 PF02472 Biopolymer transport protein ExbD/TolR APS40_RS05865 PF01618 MotA/TolQ/ExbB proton channel family APS40_RS05875 PF03061 Thioesterase superfamily APS40_RS05885 PF05496 Holliday junction DNA helicase RuvB P-loop domain APS40_RS05885 PF17864 RuvB AAA lid domain APS40_RS05885 PF05491 RuvB C-terminal winged helix domain APS40_RS05900 PF07499 RuvA, C-terminal domain APS40_RS05900 PF01330 RuvA N terminal domain APS40_RS05905 PF02075 Crossover junction endodeoxyribonuclease RuvC APS40_RS05910 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS05910 PF17158 Membrane-associated sensor, integral membrane domain APS40_RS05915 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS05920 PF01709 Transcriptional regulator APS40_RS05925 PF13277 YmdB-like protein APS40_RS05935 PF00999 Sodium/hydrogen exchanger family APS40_RS05940 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS05950 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH APS40_RS05955 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS40_RS05955 PF01464 Transglycosylase SLT domain APS40_RS05970 PF00456 Transketolase, thiamine diphosphate binding domain APS40_RS05970 PF02780 Transketolase, C-terminal domain APS40_RS05970 PF02779 Transketolase, pyrimidine binding domain APS40_RS05975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APS40_RS05975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APS40_RS05990 PF00162 Phosphoglycerate kinase APS40_RS06000 PF00274 Fructose-bisphosphate aldolase class-I APS40_RS06015 PF00459 Inositol monophosphatase family APS40_RS06025 PF13677 Membrane MotB of proton-channel complex MotA/MotB APS40_RS06025 PF00691 OmpA family APS40_RS06030 PF00005 ABC transporter APS40_RS06030 PF00664 ABC transporter transmembrane region APS40_RS06035 PF01197 Ribosomal protein L31 APS40_RS06055 PF00109 Beta-ketoacyl synthase, N-terminal domain APS40_RS06055 PF16197 Ketoacyl-synthetase C-terminal extension APS40_RS06055 PF14765 Polyketide synthase dehydratase APS40_RS06055 PF00550 Phosphopantetheine attachment site APS40_RS06055 PF00698 Acyl transferase domain APS40_RS06055 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS06055 PF00107 Zinc-binding dehydrogenase APS40_RS06055 PF08659 KR domain APS40_RS06055 PF02801 Beta-ketoacyl synthase, C-terminal domain APS40_RS06065 PF00999 Sodium/hydrogen exchanger family APS40_RS06065 PF02254 TrkA-N domain APS40_RS06085 PF00440 Bacterial regulatory proteins, tetR family APS40_RS06090 PF00731 AIR carboxylase APS40_RS06095 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APS40_RS06095 PF02222 ATP-grasp domain APS40_RS06100 PF01165 Ribosomal protein S21 APS40_RS06135 PF02233 NAD(P) transhydrogenase beta subunit APS40_RS06145 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch APS40_RS06150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APS40_RS06150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APS40_RS06170 PF02954 Bacterial regulatory protein, Fis family APS40_RS06170 PF00072 Response regulator receiver domain APS40_RS06170 PF00158 Sigma-54 interaction domain APS40_RS06185 PF02780 Transketolase, C-terminal domain APS40_RS06185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APS40_RS06185 PF02779 Transketolase, pyrimidine binding domain APS40_RS06195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS06200 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06205 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS06205 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06210 PF00005 ABC transporter APS40_RS06210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS06215 PF00296 Luciferase-like monooxygenase APS40_RS06235 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS06235 PF00563 EAL domain APS40_RS06235 PF13188 PAS domain APS40_RS06235 PF03707 Bacterial signalling protein N terminal repeat APS40_RS06240 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) APS40_RS06250 PF00224 Pyruvate kinase, barrel domain APS40_RS06250 PF02887 Pyruvate kinase, alpha/beta domain APS40_RS06260 PF00444 Ribosomal protein L36 APS40_RS06265 PF00158 Sigma-54 interaction domain APS40_RS06265 PF02954 Bacterial regulatory protein, Fis family APS40_RS06265 PF00072 Response regulator receiver domain APS40_RS06270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS06270 PF00005 ABC transporter APS40_RS06275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS06275 PF00005 ABC transporter APS40_RS06280 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06285 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS06295 PF02803 Thiolase, C-terminal domain APS40_RS06295 PF00108 Thiolase, N-terminal domain APS40_RS06300 PF00378 Enoyl-CoA hydratase/isomerase APS40_RS06300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS40_RS06300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS40_RS06305 PF09317 Domain of unknown function (DUF1974) APS40_RS06305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS40_RS06305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS40_RS06310 PF13193 AMP-binding enzyme C-terminal domain APS40_RS06310 PF00501 AMP-binding enzyme APS40_RS06315 PF13411 MerR HTH family regulatory protein APS40_RS06325 PF04679 ATP dependent DNA ligase C terminal region APS40_RS06325 PF01068 ATP dependent DNA ligase domain APS40_RS06325 PF04675 DNA ligase N terminus APS40_RS06340 PF05193 Peptidase M16 inactive domain APS40_RS06340 PF00675 Insulinase (Peptidase family M16) APS40_RS06340 PF08367 Peptidase M16C associated APS40_RS06345 PF00248 Aldo/keto reductase family APS40_RS06350 PF00005 ABC transporter APS40_RS06350 PF00664 ABC transporter transmembrane region APS40_RS06355 PF00149 Calcineurin-like phosphoesterase APS40_RS06360 PF00009 Elongation factor Tu GTP binding domain APS40_RS06360 PF03144 Elongation factor Tu domain 2 APS40_RS06360 PF16658 Class II release factor RF3, C-terminal domain APS40_RS06365 PF13505 Outer membrane protein beta-barrel domain APS40_RS06385 PF13505 Outer membrane protein beta-barrel domain APS40_RS06390 PF13505 Outer membrane protein beta-barrel domain APS40_RS06395 PF13505 Outer membrane protein beta-barrel domain APS40_RS06410 PF00072 Response regulator receiver domain APS40_RS06420 PF00459 Inositol monophosphatase family APS40_RS06430 PF00011 Hsp20/alpha crystallin family APS40_RS06440 PF00210 Ferritin-like domain APS40_RS06455 PF01493 GXGXG motif APS40_RS06455 PF00310 Glutamine amidotransferases class-II APS40_RS06455 PF01645 Conserved region in glutamate synthase APS40_RS06455 PF04898 Glutamate synthase central domain APS40_RS06460 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS06460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS40_RS06465 PF02566 OsmC-like protein APS40_RS06470 PF01047 MarR family APS40_RS06490 PF01370 NAD dependent epimerase/dehydratase family APS40_RS06495 PF00483 Nucleotidyl transferase APS40_RS06510 PF16200 C-terminal region of band_7 APS40_RS06510 PF01145 SPFH domain / Band 7 family APS40_RS06515 PF02735 Ku70/Ku80 beta-barrel domain APS40_RS06520 PF04679 ATP dependent DNA ligase C terminal region APS40_RS06520 PF13298 DNA polymerase Ligase (LigD) APS40_RS06520 PF01068 ATP dependent DNA ligase domain APS40_RS06525 PF00762 Ferrochelatase APS40_RS06530 PF03824 High-affinity nickel-transport protein APS40_RS06535 PF03466 LysR substrate binding domain APS40_RS06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS06545 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06555 PF03459 TOBE domain APS40_RS06555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS06560 PF01081 KDPG and KHG aldolase APS40_RS06565 PF02445 Quinolinate synthetase A protein APS40_RS06570 PF07411 Domain of unknown function (DUF1508) APS40_RS06575 PF00890 FAD binding domain APS40_RS06575 PF02910 Fumarate reductase flavoprotein C-term APS40_RS06580 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH APS40_RS06595 PF12833 Helix-turn-helix domain APS40_RS06595 PF02311 AraC-like ligand binding domain APS40_RS06600 PF13416 Bacterial extracellular solute-binding protein APS40_RS06605 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS06615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS06635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS40_RS06640 PF03480 Bacterial extracellular solute-binding protein, family 7 APS40_RS06650 PF08281 Sigma-70, region 4 APS40_RS06650 PF04542 Sigma-70 region 2 APS40_RS06665 PF01070 FMN-dependent dehydrogenase APS40_RS06675 PF04945 YHS domain APS40_RS06680 PF09278 MerR, DNA binding APS40_RS06680 PF00376 MerR family regulatory protein APS40_RS06690 PF00171 Aldehyde dehydrogenase family APS40_RS06695 PF08450 SMP-30/Gluconolactonase/LRE-like region APS40_RS06705 PF14760 Rnk N-terminus APS40_RS06705 PF01272 Transcription elongation factor, GreA/GreB, C-term APS40_RS06710 PF00708 Acylphosphatase APS40_RS06715 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APS40_RS06715 PF08666 SAF domain APS40_RS06720 PF00392 Bacterial regulatory proteins, gntR family APS40_RS06720 PF07729 FCD domain APS40_RS06725 PF05025 RbsD / FucU transport protein family APS40_RS06730 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS40_RS06745 PF01042 Endoribonuclease L-PSP APS40_RS06750 PF09335 SNARE associated Golgi protein APS40_RS06755 PF09335 SNARE associated Golgi protein APS40_RS06780 PF01738 Dienelactone hydrolase family APS40_RS06785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS40_RS06790 PF01261 Xylose isomerase-like TIM barrel APS40_RS06795 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family APS40_RS06795 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain APS40_RS06805 PF13378 Enolase C-terminal domain-like APS40_RS06805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS06815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS40_RS06815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS40_RS06820 PF02653 Branched-chain amino acid transport system / permease component APS40_RS06825 PF00005 ABC transporter APS40_RS06830 PF13407 Periplasmic binding protein domain APS40_RS06835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS06835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS06840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS06845 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06850 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS06850 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS06855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS06855 PF00005 ABC transporter APS40_RS06860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS06860 PF00005 ABC transporter APS40_RS06880 PF02615 Malate/L-lactate dehydrogenase APS40_RS06890 PF09339 IclR helix-turn-helix domain APS40_RS06890 PF01614 Bacterial transcriptional regulator APS40_RS06900 PF07171 MlrC C-terminus APS40_RS06900 PF07364 Metallopeptidase family M81 APS40_RS06905 PF01614 Bacterial transcriptional regulator APS40_RS06905 PF09339 IclR helix-turn-helix domain APS40_RS06910 PF07364 Metallopeptidase family M81 APS40_RS06910 PF07171 MlrC C-terminus APS40_RS06920 PF00202 Aminotransferase class-III APS40_RS06925 PF03466 LysR substrate binding domain APS40_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS06935 PF12706 Beta-lactamase superfamily domain APS40_RS06940 PF03070 TENA/THI-4/PQQC family APS40_RS06945 PF05402 Coenzyme PQQ synthesis protein D (PqqD) APS40_RS06950 PF13186 Iron-sulfur cluster-binding domain APS40_RS06950 PF04055 Radical SAM superfamily APS40_RS06955 PF00561 alpha/beta hydrolase fold APS40_RS06985 PF02735 Ku70/Ku80 beta-barrel domain APS40_RS06990 PF04679 ATP dependent DNA ligase C terminal region APS40_RS06990 PF01068 ATP dependent DNA ligase domain APS40_RS06990 PF13298 DNA polymerase Ligase (LigD) APS40_RS06995 PF00356 Bacterial regulatory proteins, lacI family APS40_RS07000 PF02653 Branched-chain amino acid transport system / permease component APS40_RS07005 PF00005 ABC transporter APS40_RS07010 PF13407 Periplasmic binding protein domain APS40_RS07030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS07030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS07040 PF02515 CoA-transferase family III APS40_RS07060 PF00005 ABC transporter APS40_RS07060 PF17912 MalK OB fold domain APS40_RS07060 PF03459 TOBE domain APS40_RS07065 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS07080 PF13378 Enolase C-terminal domain-like APS40_RS07085 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07090 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07100 PF17912 MalK OB fold domain APS40_RS07100 PF00005 ABC transporter APS40_RS07105 PF00392 Bacterial regulatory proteins, gntR family APS40_RS07105 PF07729 FCD domain APS40_RS07115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS07115 PF13378 Enolase C-terminal domain-like APS40_RS07125 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07150 PF02515 CoA-transferase family III APS40_RS07155 PF00378 Enoyl-CoA hydratase/isomerase APS40_RS07160 PF00480 ROK family APS40_RS07165 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07170 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07180 PF07702 UTRA domain APS40_RS07180 PF00392 Bacterial regulatory proteins, gntR family APS40_RS07190 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase APS40_RS07200 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07205 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS07215 PF00005 ABC transporter APS40_RS07215 PF17912 MalK OB fold domain APS40_RS07220 PF00701 Dihydrodipicolinate synthetase family APS40_RS07235 PF02733 Dak1 domain APS40_RS07245 PF08468 Methyltransferase small domain N-terminal APS40_RS07245 PF05175 Methyltransferase small domain APS40_RS07260 PF00248 Aldo/keto reductase family APS40_RS07280 PF07859 alpha/beta hydrolase fold APS40_RS07290 PF00210 Ferritin-like domain APS40_RS07305 PF00248 Aldo/keto reductase family APS40_RS07320 PF01061 ABC-2 type transporter APS40_RS07325 PF00005 ABC transporter APS40_RS07330 PF01068 ATP dependent DNA ligase domain APS40_RS07330 PF04679 ATP dependent DNA ligase C terminal region APS40_RS07360 PF04225 Opacity-associated protein A LysM-like domain APS40_RS07360 PF01551 Peptidase family M23 APS40_RS07365 PF07690 Major Facilitator Superfamily APS40_RS07375 PF13396 Phospholipase_D-nuclease N-terminal APS40_RS07375 PF13091 PLD-like domain APS40_RS07385 PF00004 ATPase family associated with various cellular activities (AAA) APS40_RS07385 PF17871 AAA lid domain APS40_RS07385 PF07724 AAA domain (Cdc48 subfamily) APS40_RS07385 PF02861 Clp amino terminal domain, pathogenicity island component APS40_RS07385 PF10431 C-terminal, D2-small domain, of ClpB protein APS40_RS07390 PF01061 ABC-2 type transporter APS40_RS07395 PF00005 ABC transporter APS40_RS07400 PF02909 Tetracyclin repressor-like, C-terminal domain APS40_RS07400 PF00440 Bacterial regulatory proteins, tetR family APS40_RS07410 PF17827 PrmC N-terminal domain APS40_RS07410 PF05175 Methyltransferase small domain APS40_RS07415 PF00472 RF-1 domain APS40_RS07415 PF03462 PCRF domain APS40_RS07420 PF00391 PEP-utilising enzyme, mobile domain APS40_RS07420 PF02896 PEP-utilising enzyme, TIM barrel domain APS40_RS07420 PF05524 PEP-utilising enzyme, N-terminal APS40_RS07425 PF01842 ACT domain APS40_RS07425 PF00696 Amino acid kinase family APS40_RS07425 PF13840 ACT domain APS40_RS07440 PF00248 Aldo/keto reductase family APS40_RS07450 PF00795 Carbon-nitrogen hydrolase APS40_RS07455 PF00462 Glutaredoxin APS40_RS07460 PF00156 Phosphoribosyl transferase domain APS40_RS07465 PF08241 Methyltransferase domain APS40_RS07475 PF00293 NUDIX domain APS40_RS07485 PF01960 ArgJ family APS40_RS07495 PF17925 Tetracyclin repressor-like, C-terminal domain APS40_RS07495 PF00440 Bacterial regulatory proteins, tetR family APS40_RS07500 PF05698 Bacterial trigger factor protein (TF) C-terminus APS40_RS07505 PF07517 SecA DEAD-like domain APS40_RS07505 PF02810 SEC-C motif APS40_RS07505 PF01043 SecA preprotein cross-linking domain APS40_RS07505 PF07516 SecA Wing and Scaffold domain APS40_RS07540 PF00892 EamA-like transporter family APS40_RS07555 PF03734 L,D-transpeptidase catalytic domain APS40_RS07560 PF03734 L,D-transpeptidase catalytic domain APS40_RS07565 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APS40_RS07575 PF00589 Phage integrase family APS40_RS07575 PF02899 Phage integrase, N-terminal SAM-like domain APS40_RS07585 PF01202 Shikimate kinase APS40_RS07590 PF01761 3-dehydroquinate synthase APS40_RS07595 PF01494 FAD binding domain APS40_RS07600 PF01367 5'-3' exonuclease, C-terminal SAM fold APS40_RS07600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APS40_RS07600 PF00476 DNA polymerase family A APS40_RS07615 PF00226 DnaJ domain APS40_RS07620 PF07728 AAA domain (dynein-related subfamily) APS40_RS07620 PF12556 Cobaltochelatase CobS subunit N terminal APS40_RS07620 PF08406 CbbQ/NirQ/NorQ C-terminal APS40_RS07625 PF08241 Methyltransferase domain APS40_RS07630 PF11775 Cobalamin biosynthesis protein CobT VWA domain APS40_RS07630 PF06213 Cobalamin biosynthesis protein CobT APS40_RS07645 PF02592 Putative vitamin uptake transporter APS40_RS07650 PF00830 Ribosomal L28 family APS40_RS07670 PF08148 DSHCT (NUC185) domain APS40_RS07670 PF00270 DEAD/DEAH box helicase APS40_RS07670 PF00271 Helicase conserved C-terminal domain APS40_RS07680 PF11953 Domain of unknown function (DUF3470) APS40_RS07680 PF00037 4Fe-4S binding domain APS40_RS07685 PF02559 CarD-like/TRCF domain APS40_RS07690 PF00293 NUDIX domain APS40_RS07705 PF01266 FAD dependent oxidoreductase APS40_RS07705 PF05430 S-adenosyl-L-methionine-dependent methyltransferase APS40_RS07730 PF02566 OsmC-like protein APS40_RS07735 PF03734 L,D-transpeptidase catalytic domain APS40_RS07760 PF08279 HTH domain APS40_RS07760 PF13280 WYL domain APS40_RS07770 PF14310 Fibronectin type III-like domain APS40_RS07770 PF00933 Glycosyl hydrolase family 3 N terminal domain APS40_RS07770 PF07691 PA14 domain APS40_RS07770 PF01915 Glycosyl hydrolase family 3 C-terminal domain APS40_RS07775 PF01638 HxlR-like helix-turn-helix APS40_RS07780 PF02522 Aminoglycoside 3-N-acetyltransferase APS40_RS07785 PF00248 Aldo/keto reductase family APS40_RS07790 PF13411 MerR HTH family regulatory protein APS40_RS07800 PF00440 Bacterial regulatory proteins, tetR family APS40_RS07805 PF01554 MatE APS40_RS07850 PF00561 alpha/beta hydrolase fold APS40_RS07870 PF02230 Phospholipase/Carboxylesterase APS40_RS07880 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS40_RS07890 PF03466 LysR substrate binding domain APS40_RS07890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS07900 PF01923 Cobalamin adenosyltransferase APS40_RS07920 PF00294 pfkB family carbohydrate kinase APS40_RS07925 PF08534 Redoxin APS40_RS07930 PF00206 Lyase APS40_RS07930 PF14698 Argininosuccinate lyase C-terminal APS40_RS07940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS40_RS07940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APS40_RS07945 PF04172 LrgB-like family APS40_RS07950 PF03788 LrgA family APS40_RS07960 PF02954 Bacterial regulatory protein, Fis family APS40_RS07960 PF00072 Response regulator receiver domain APS40_RS07960 PF00158 Sigma-54 interaction domain APS40_RS07970 PF00005 ABC transporter APS40_RS08000 PF02153 Prephenate dehydrogenase APS40_RS08005 PF00155 Aminotransferase class I and II APS40_RS08020 PF16123 Hydroxyacylglutathione hydrolase C-terminus APS40_RS08020 PF00753 Metallo-beta-lactamase superfamily APS40_RS08040 PF00206 Lyase APS40_RS08040 PF10415 Fumarase C C-terminus APS40_RS08045 PF01783 Ribosomal L32p protein family APS40_RS08050 PF00348 Polyprenyl synthetase APS40_RS08055 PF04551 GcpE protein APS40_RS08075 PF06803 Protein of unknown function (DUF1232) APS40_RS08080 PF01878 EVE domain APS40_RS08085 PF02436 Conserved carboxylase domain APS40_RS08085 PF00289 Biotin carboxylase, N-terminal domain APS40_RS08085 PF00682 HMGL-like APS40_RS08085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS40_RS08085 PF00364 Biotin-requiring enzyme APS40_RS08085 PF02785 Biotin carboxylase C-terminal domain APS40_RS08095 PF00583 Acetyltransferase (GNAT) family APS40_RS08100 PF13188 PAS domain APS40_RS08100 PF00563 EAL domain APS40_RS08100 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS08100 PF03707 Bacterial signalling protein N terminal repeat APS40_RS08110 PF13458 Periplasmic binding protein APS40_RS08115 PF00106 short chain dehydrogenase APS40_RS08140 PF02653 Branched-chain amino acid transport system / permease component APS40_RS08145 PF00005 ABC transporter APS40_RS08150 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS40_RS08150 PF00005 ABC transporter APS40_RS08155 PF02142 MGS-like domain APS40_RS08170 PF00672 HAMP domain APS40_RS08170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS08175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS08175 PF00672 HAMP domain APS40_RS08180 PF00072 Response regulator receiver domain APS40_RS08185 PF00072 Response regulator receiver domain APS40_RS08185 PF01339 CheB methylesterase APS40_RS08190 PF03705 CheR methyltransferase, all-alpha domain APS40_RS08190 PF01739 CheR methyltransferase, SAM binding domain APS40_RS08195 PF02203 Tar ligand binding domain homologue APS40_RS08195 PF00672 HAMP domain APS40_RS08195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS08200 PF03975 CheD chemotactic sensory transduction APS40_RS08210 PF00266 Aminotransferase class-V APS40_RS08215 PF00005 ABC transporter APS40_RS08220 PF02653 Branched-chain amino acid transport system / permease component APS40_RS08225 PF02653 Branched-chain amino acid transport system / permease component APS40_RS08235 PF07859 alpha/beta hydrolase fold APS40_RS08240 PF03459 TOBE domain APS40_RS08240 PF17912 MalK OB fold domain APS40_RS08240 PF00005 ABC transporter APS40_RS08245 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS08250 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS08260 PF00005 ABC transporter APS40_RS08270 PF00005 ABC transporter APS40_RS08275 PF00005 ABC transporter APS40_RS08280 PF06007 Phosphonate metabolism protein PhnJ APS40_RS08290 PF05861 Bacterial phosphonate metabolism protein (PhnI) APS40_RS08295 PF05845 Bacterial phosphonate metabolism protein (PhnH) APS40_RS08300 PF06754 Phosphonate metabolism protein PhnG APS40_RS08305 PF00392 Bacterial regulatory proteins, gntR family APS40_RS08305 PF07702 UTRA domain APS40_RS08310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS08310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS08320 PF13378 Enolase C-terminal domain-like APS40_RS08320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS08325 PF05336 L-rhamnose mutarotase APS40_RS08330 PF07729 FCD domain APS40_RS08330 PF00392 Bacterial regulatory proteins, gntR family APS40_RS08335 PF02653 Branched-chain amino acid transport system / permease component APS40_RS08340 PF00005 ABC transporter APS40_RS08355 PF13378 Enolase C-terminal domain-like APS40_RS08355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS08360 PF07729 FCD domain APS40_RS08360 PF00392 Bacterial regulatory proteins, gntR family APS40_RS08390 PF02653 Branched-chain amino acid transport system / permease component APS40_RS08395 PF00005 ABC transporter APS40_RS08400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APS40_RS08405 PF02653 Branched-chain amino acid transport system / permease component APS40_RS08410 PF00005 ABC transporter APS40_RS08435 PF00005 ABC transporter APS40_RS08435 PF17912 MalK OB fold domain APS40_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS08450 PF13416 Bacterial extracellular solute-binding protein APS40_RS08455 PF01546 Peptidase family M20/M25/M40 APS40_RS08455 PF07687 Peptidase dimerisation domain APS40_RS08465 PF01380 SIS domain APS40_RS08465 PF01418 Helix-turn-helix domain, rpiR family APS40_RS08470 PF00005 ABC transporter APS40_RS08485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS08485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS08490 PF01979 Amidohydrolase family APS40_RS08500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS08500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS08515 PF02685 Glucokinase APS40_RS08515 PF01418 Helix-turn-helix domain, rpiR family APS40_RS08515 PF01380 SIS domain APS40_RS08520 PF03315 Serine dehydratase beta chain APS40_RS08520 PF03313 Serine dehydratase alpha chain APS40_RS08530 PF16347 Domain of unknown function (DUF4976) APS40_RS08530 PF00884 Sulfatase APS40_RS08540 PF07171 MlrC C-terminus APS40_RS08540 PF07364 Metallopeptidase family M81 APS40_RS08545 PF01569 PAP2 superfamily APS40_RS08550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS40_RS08555 PF00072 Response regulator receiver domain APS40_RS08555 PF00486 Transcriptional regulatory protein, C terminal APS40_RS08560 PF13493 Domain of unknown function (DUF4118) APS40_RS08560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS08560 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS08560 PF02702 Osmosensitive K+ channel His kinase sensor domain APS40_RS08560 PF13492 GAF domain APS40_RS08565 PF02669 K+-transporting ATPase, c chain APS40_RS08575 PF03814 Potassium-transporting ATPase A subunit APS40_RS08585 PF13472 GDSL-like Lipase/Acylhydrolase family APS40_RS08585 PF07859 alpha/beta hydrolase fold APS40_RS08595 PF00392 Bacterial regulatory proteins, gntR family APS40_RS08595 PF07729 FCD domain APS40_RS08600 PF00248 Aldo/keto reductase family APS40_RS08605 PF00005 ABC transporter APS40_RS08610 PF02653 Branched-chain amino acid transport system / permease component APS40_RS08615 PF02653 Branched-chain amino acid transport system / permease component APS40_RS08635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS08635 PF00005 ABC transporter APS40_RS08640 PF00005 ABC transporter APS40_RS08640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS08645 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS08650 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS08660 PF08220 DeoR-like helix-turn-helix domain APS40_RS08660 PF00455 DeoR C terminal sensor domain APS40_RS08665 PF00456 Transketolase, thiamine diphosphate binding domain APS40_RS08670 PF02780 Transketolase, C-terminal domain APS40_RS08670 PF02779 Transketolase, pyrimidine binding domain APS40_RS08675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS40_RS08675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS40_RS08680 PF01261 Xylose isomerase-like TIM barrel APS40_RS08685 PF03786 D-mannonate dehydratase (UxuA) APS40_RS08695 PF07729 FCD domain APS40_RS08695 PF00392 Bacterial regulatory proteins, gntR family APS40_RS08700 PF00199 Catalase APS40_RS08700 PF06628 Catalase-related immune-responsive APS40_RS08700 PF18011 C-terminal domain found in long catalases APS40_RS08710 PF01156 Inosine-uridine preferring nucleoside hydrolase APS40_RS08725 PF00689 Cation transporting ATPase, C-terminus APS40_RS08725 PF00690 Cation transporter/ATPase, N-terminus APS40_RS08730 PF04055 Radical SAM superfamily APS40_RS08735 PF13545 Crp-like helix-turn-helix domain APS40_RS08735 PF00027 Cyclic nucleotide-binding domain APS40_RS08740 PF03597 Cytochrome oxidase maturation protein cbb3-type APS40_RS08750 PF05751 FixH APS40_RS08755 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase APS40_RS08755 PF12801 4Fe-4S binding domain APS40_RS08755 PF13746 4Fe-4S dicluster domain APS40_RS08760 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP APS40_RS08760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS40_RS08775 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS40_RS08790 PF12704 MacB-like periplasmic core domain APS40_RS08790 PF00005 ABC transporter APS40_RS08790 PF02687 FtsX-like permease family APS40_RS08795 PF02687 FtsX-like permease family APS40_RS08795 PF00005 ABC transporter APS40_RS08795 PF12704 MacB-like periplasmic core domain APS40_RS08810 PF12697 Alpha/beta hydrolase family APS40_RS08820 PF00294 pfkB family carbohydrate kinase APS40_RS08830 PF02685 Glucokinase APS40_RS08835 PF00391 PEP-utilising enzyme, mobile domain APS40_RS08835 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain APS40_RS08835 PF02896 PEP-utilising enzyme, TIM barrel domain APS40_RS08845 PF00085 Thioredoxin APS40_RS08890 PF12697 Alpha/beta hydrolase family APS40_RS08910 PF00027 Cyclic nucleotide-binding domain APS40_RS08910 PF13545 Crp-like helix-turn-helix domain APS40_RS08920 PF00196 Bacterial regulatory proteins, luxR family APS40_RS08920 PF00072 Response regulator receiver domain APS40_RS08925 PF00989 PAS fold APS40_RS08925 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS08945 PF00583 Acetyltransferase (GNAT) family APS40_RS08945 PF13607 Succinyl-CoA ligase like flavodoxin domain APS40_RS08945 PF13380 CoA binding domain APS40_RS08950 PF00118 TCP-1/cpn60 chaperonin family APS40_RS08955 PF00690 Cation transporter/ATPase, N-terminus APS40_RS08955 PF00689 Cation transporting ATPase, C-terminus APS40_RS08960 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS08980 PF02424 ApbE family APS40_RS08985 PF00667 FAD binding domain APS40_RS08985 PF00258 Flavodoxin APS40_RS08985 PF00175 Oxidoreductase NAD-binding domain APS40_RS08995 PF00486 Transcriptional regulatory protein, C terminal APS40_RS08995 PF00072 Response regulator receiver domain APS40_RS09000 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS09000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS09005 PF00403 Heavy-metal-associated domain APS40_RS09035 PF00582 Universal stress protein family APS40_RS09040 PF00156 Phosphoribosyl transferase domain APS40_RS09040 PF01738 Dienelactone hydrolase family APS40_RS09045 PF00011 Hsp20/alpha crystallin family APS40_RS09080 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APS40_RS09080 PF14572 Phosphoribosyl synthetase-associated domain APS40_RS09110 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS09110 PF00107 Zinc-binding dehydrogenase APS40_RS09125 PF00829 Ribosomal prokaryotic L21 protein APS40_RS09130 PF01016 Ribosomal L27 protein APS40_RS09140 PF13302 Acetyltransferase (GNAT) domain APS40_RS09150 PF01018 GTP1/OBG APS40_RS09150 PF01926 50S ribosome-binding GTPase APS40_RS09155 PF01472 PUA domain APS40_RS09155 PF00696 Amino acid kinase family APS40_RS09160 PF00171 Aldehyde dehydrogenase family APS40_RS09165 PF01467 Cytidylyltransferase-like APS40_RS09175 PF02590 Predicted SPOUT methyltransferase APS40_RS09180 PF01551 Peptidase family M23 APS40_RS09185 PF13180 PDZ domain APS40_RS09185 PF03572 Peptidase family S41 APS40_RS09195 PF00293 NUDIX domain APS40_RS09200 PF01177 Asp/Glu/Hydantoin racemase APS40_RS09205 PF08447 PAS fold APS40_RS09205 PF13426 PAS domain APS40_RS09205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS09210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS09210 PF00672 HAMP domain APS40_RS09215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS09215 PF00672 HAMP domain APS40_RS09220 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APS40_RS09225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS40_RS09225 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS40_RS09230 PF00231 ATP synthase APS40_RS09235 PF00306 ATP synthase alpha/beta chain, C terminal domain APS40_RS09235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS40_RS09235 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS40_RS09240 PF00213 ATP synthase delta (OSCP) subunit APS40_RS09245 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APS40_RS09245 PF00270 DEAD/DEAH box helicase APS40_RS09245 PF18074 Primosomal protein N C-terminal domain APS40_RS09245 PF17764 3′ DNA-binding domain (3′BD) APS40_RS09255 PF17969 L,D-transpeptidase C-terminal domain APS40_RS09255 PF03734 L,D-transpeptidase catalytic domain APS40_RS09265 PF00589 Phage integrase family APS40_RS09265 PF02899 Phage integrase, N-terminal SAM-like domain APS40_RS09270 PF00392 Bacterial regulatory proteins, gntR family APS40_RS09270 PF07729 FCD domain APS40_RS09285 PF02817 e3 binding domain APS40_RS09285 PF00364 Biotin-requiring enzyme APS40_RS09285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS40_RS09290 PF16078 2-oxoglutarate dehydrogenase N-terminus APS40_RS09290 PF00676 Dehydrogenase E1 component APS40_RS09290 PF16870 2-oxoglutarate dehydrogenase C-terminal APS40_RS09290 PF02779 Transketolase, pyrimidine binding domain APS40_RS09295 PF02629 CoA binding domain APS40_RS09295 PF00549 CoA-ligase APS40_RS09300 PF08442 ATP-grasp domain APS40_RS09300 PF00549 CoA-ligase APS40_RS09310 PF00056 lactate/malate dehydrogenase, NAD binding domain APS40_RS09310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APS40_RS09315 PF03969 AFG1-like ATPase APS40_RS09330 PF13237 4Fe-4S dicluster domain APS40_RS09330 PF13085 2Fe-2S iron-sulfur cluster binding domain APS40_RS09355 PF02910 Fumarate reductase flavoprotein C-term APS40_RS09355 PF00890 FAD binding domain APS40_RS09375 PF00293 NUDIX domain APS40_RS09395 PF01638 HxlR-like helix-turn-helix APS40_RS09405 PF00484 Carbonic anhydrase APS40_RS09410 PF00892 EamA-like transporter family APS40_RS09415 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS40_RS09415 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS40_RS09430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS09430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS09435 PF00440 Bacterial regulatory proteins, tetR family APS40_RS09460 PF00356 Bacterial regulatory proteins, lacI family APS40_RS09465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS09470 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS09480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS09480 PF00005 ABC transporter APS40_RS09485 PF00005 ABC transporter APS40_RS09485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS09495 PF00005 ABC transporter APS40_RS09515 PF04227 Indigoidine synthase A like protein APS40_RS09520 PF13416 Bacterial extracellular solute-binding protein APS40_RS09525 PF00005 ABC transporter APS40_RS09525 PF08402 TOBE domain APS40_RS09530 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS09535 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS09540 PF00892 EamA-like transporter family APS40_RS09545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS09545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS09550 PF01418 Helix-turn-helix domain, rpiR family APS40_RS09550 PF01380 SIS domain APS40_RS09560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS09560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS09565 PF00294 pfkB family carbohydrate kinase APS40_RS09570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS40_RS09570 PF00205 Thiamine pyrophosphate enzyme, central domain APS40_RS09570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS40_RS09575 PF01261 Xylose isomerase-like TIM barrel APS40_RS09580 PF04962 KduI/IolB family APS40_RS09585 PF00551 Formyl transferase APS40_RS09590 PF05368 NmrA-like family APS40_RS09595 PF01638 HxlR-like helix-turn-helix APS40_RS09605 PF07694 5TMR of 5TMR-LYT APS40_RS09605 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS09610 PF12857 TOBE-like domain APS40_RS09610 PF00005 ABC transporter APS40_RS09615 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS09620 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS09630 PF02082 Transcriptional regulator APS40_RS09635 PF02254 TrkA-N domain APS40_RS09635 PF00999 Sodium/hydrogen exchanger family APS40_RS09640 PF00107 Zinc-binding dehydrogenase APS40_RS09640 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS09645 PF01329 Pterin 4 alpha carbinolamine dehydratase APS40_RS09660 PF08448 PAS fold APS40_RS09660 PF08447 PAS fold APS40_RS09660 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS09660 PF00563 EAL domain APS40_RS09670 PF07944 Beta-L-arabinofuranosidase, GH127 APS40_RS09675 PF00356 Bacterial regulatory proteins, lacI family APS40_RS09680 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS09685 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS09690 PF01547 Bacterial extracellular solute-binding protein APS40_RS09715 PF00392 Bacterial regulatory proteins, gntR family APS40_RS09715 PF07702 UTRA domain APS40_RS09765 PF03900 Porphobilinogen deaminase, C-terminal domain APS40_RS09765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APS40_RS09770 PF00814 Glycoprotease family APS40_RS09775 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APS40_RS09775 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APS40_RS09810 PF01435 Peptidase family M48 APS40_RS09815 PF01029 NusB family APS40_RS09815 PF01189 16S rRNA methyltransferase RsmB/F APS40_RS09825 PF01808 AICARFT/IMPCHase bienzyme APS40_RS09825 PF02142 MGS-like domain APS40_RS09830 PF05088 Bacterial NAD-glutamate dehydrogenase APS40_RS09835 PF00330 Aconitase family (aconitate hydratase) APS40_RS09850 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS09865 PF01048 Phosphorylase superfamily APS40_RS09870 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS40_RS09875 PF01494 FAD binding domain APS40_RS09880 PF00543 Nitrogen regulatory protein P-II APS40_RS09885 PF00909 Ammonium Transporter Family APS40_RS09890 PF00909 Ammonium Transporter Family APS40_RS09895 PF00005 ABC transporter APS40_RS09895 PF00664 ABC transporter transmembrane region APS40_RS09900 PF02469 Fasciclin domain APS40_RS09905 PF00296 Luciferase-like monooxygenase APS40_RS09930 PF00180 Isocitrate/isopropylmalate dehydrogenase APS40_RS09935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APS40_RS09935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APS40_RS09945 PF00694 Aconitase C-terminal domain APS40_RS09950 PF03966 Trm112p-like protein APS40_RS09960 PF00085 Thioredoxin APS40_RS09970 PF06441 Epoxide hydrolase N terminus APS40_RS09980 PF02653 Branched-chain amino acid transport system / permease component APS40_RS09985 PF02653 Branched-chain amino acid transport system / permease component APS40_RS09990 PF00005 ABC transporter APS40_RS09995 PF02608 ABC transporter substrate-binding protein PnrA-like APS40_RS10030 PF00005 ABC transporter APS40_RS10035 PF00005 ABC transporter APS40_RS10060 PF13360 PQQ-like domain APS40_RS10065 PF03466 LysR substrate binding domain APS40_RS10065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS10070 PF00034 Cytochrome c APS40_RS10100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS40_RS10100 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS10115 PF01042 Endoribonuclease L-PSP APS40_RS10125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS40_RS10155 PF00113 Enolase, C-terminal TIM barrel domain APS40_RS10155 PF03952 Enolase, N-terminal domain APS40_RS10160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APS40_RS10160 PF00356 Bacterial regulatory proteins, lacI family APS40_RS10165 PF00920 Dehydratase family APS40_RS10185 PF00211 Adenylate and Guanylate cyclase catalytic domain APS40_RS10190 PF02696 Uncharacterized ACR, YdiU/UPF0061 family APS40_RS10195 PF05958 tRNA (Uracil-5-)-methyltransferase APS40_RS10200 PF02913 FAD linked oxidases, C-terminal domain APS40_RS10200 PF01565 FAD binding domain APS40_RS10210 PF03551 Transcriptional regulator PadR-like family APS40_RS10225 PF01245 Ribosomal protein L19 APS40_RS10230 PF04955 HupE / UreJ protein APS40_RS10245 PF01746 tRNA (Guanine-1)-methyltransferase APS40_RS10250 PF05239 PRC-barrel domain APS40_RS10250 PF01782 RimM N-terminal domain APS40_RS10255 PF00886 Ribosomal protein S16 APS40_RS10260 PF02978 Signal peptide binding domain APS40_RS10260 PF02881 SRP54-type protein, helical bundle domain APS40_RS10260 PF00448 SRP54-type protein, GTPase domain APS40_RS10265 PF01795 MraW methylase family APS40_RS10280 PF01678 Diaminopimelate epimerase APS40_RS10285 PF04055 Radical SAM superfamily APS40_RS10285 PF00919 Uncharacterized protein family UPF0004 APS40_RS10290 PF00448 SRP54-type protein, GTPase domain APS40_RS10290 PF02881 SRP54-type protein, helical bundle domain APS40_RS10295 PF04279 Intracellular septation protein A APS40_RS10305 PF08534 Redoxin APS40_RS10310 PF01578 Cytochrome C assembly protein APS40_RS10315 PF03379 CcmB protein APS40_RS10320 PF00005 ABC transporter APS40_RS10325 PF00330 Aconitase family (aconitate hydratase) APS40_RS10325 PF00694 Aconitase C-terminal domain APS40_RS10345 PF01202 Shikimate kinase APS40_RS10355 PF01027 Inhibitor of apoptosis-promoting Bax1 APS40_RS10360 PF02834 LigT like Phosphoesterase APS40_RS10375 PF04055 Radical SAM superfamily APS40_RS10380 PF07690 Major Facilitator Superfamily APS40_RS10385 PF00583 Acetyltransferase (GNAT) family APS40_RS10390 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ APS40_RS10395 PF01810 LysE type translocator APS40_RS10425 PF08447 PAS fold APS40_RS10425 PF08448 PAS fold APS40_RS10425 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS10425 PF00563 EAL domain APS40_RS10440 PF00679 Elongation factor G C-terminus APS40_RS10440 PF03144 Elongation factor Tu domain 2 APS40_RS10440 PF00009 Elongation factor Tu GTP binding domain APS40_RS10445 PF13676 TIR domain APS40_RS10450 PF09335 SNARE associated Golgi protein APS40_RS10455 PF02627 Carboxymuconolactone decarboxylase family APS40_RS10460 PF04542 Sigma-70 region 2 APS40_RS10460 PF08281 Sigma-70, region 4 APS40_RS10465 PF12146 Serine aminopeptidase, S33 APS40_RS10465 PF13026 Protein of unknown function (DUF3887) APS40_RS10470 PF02325 YGGT family APS40_RS10475 PF00583 Acetyltransferase (GNAT) family APS40_RS10480 PF02594 Uncharacterised ACR, YggU family COG1872 APS40_RS10490 PF00106 short chain dehydrogenase APS40_RS10495 PF03030 Inorganic H+ pyrophosphatase APS40_RS10500 PF03795 YCII-related domain APS40_RS10505 PF04794 YdjC-like protein APS40_RS10515 PF01047 MarR family APS40_RS10530 PF11799 impB/mucB/samB family C-terminal domain APS40_RS10530 PF00817 impB/mucB/samB family APS40_RS10535 PF01872 RibD C-terminal domain APS40_RS10540 PF07690 Major Facilitator Superfamily APS40_RS10555 PF00144 Beta-lactamase APS40_RS10560 PF00719 Inorganic pyrophosphatase APS40_RS10570 PF01906 Putative heavy-metal-binding APS40_RS10575 PF00226 DnaJ domain APS40_RS10575 PF05099 Tellurite resistance protein TerB APS40_RS10590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS40_RS10590 PF14579 Helix-hairpin-helix motif APS40_RS10590 PF01336 OB-fold nucleic acid binding domain APS40_RS10590 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS40_RS10595 PF01584 CheW-like domain APS40_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS10600 PF01584 CheW-like domain APS40_RS10600 PF01627 Hpt domain APS40_RS10600 PF02895 Signal transducing histidine kinase, homodimeric domain APS40_RS10605 PF00072 Response regulator receiver domain APS40_RS10615 PF00378 Enoyl-CoA hydratase/isomerase APS40_RS10625 PF00107 Zinc-binding dehydrogenase APS40_RS10625 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS10635 PF00005 ABC transporter APS40_RS10645 PF00440 Bacterial regulatory proteins, tetR family APS40_RS10650 PF13491 4TM region of DNA translocase FtsK/SpoIIIE APS40_RS10650 PF17854 FtsK alpha domain APS40_RS10650 PF09397 Ftsk gamma domain APS40_RS10650 PF01580 FtsK/SpoIIIE family APS40_RS10685 PF00486 Transcriptional regulatory protein, C terminal APS40_RS10685 PF00072 Response regulator receiver domain APS40_RS10690 PF00356 Bacterial regulatory proteins, lacI family APS40_RS10695 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS10700 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS10705 PF01547 Bacterial extracellular solute-binding protein APS40_RS10710 PF13802 Galactose mutarotase-like APS40_RS10710 PF01055 Glycosyl hydrolases family 31 APS40_RS10715 PF13091 PLD-like domain APS40_RS10725 PF01168 Alanine racemase, N-terminal domain APS40_RS10730 PF00133 tRNA synthetases class I (I, L, M and V) APS40_RS10730 PF13603 Leucyl-tRNA synthetase, Domain 2 APS40_RS10730 PF08264 Anticodon-binding domain of tRNA APS40_RS10740 PF06144 DNA polymerase III, delta subunit APS40_RS10745 PF17762 HTH domain found in ParB protein APS40_RS10745 PF02195 ParB-like nuclease domain APS40_RS10750 PF13614 AAA domain APS40_RS10755 PF02527 rRNA small subunit methyltransferase G APS40_RS10760 PF01134 Glucose inhibited division protein A APS40_RS10760 PF13932 GidA associated domain APS40_RS10765 PF01926 50S ribosome-binding GTPase APS40_RS10765 PF12631 MnmE helical domain APS40_RS10765 PF10396 GTP-binding protein TrmE N-terminus APS40_RS10770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS40_RS10770 PF07498 Rho termination factor, N-terminal domain APS40_RS10770 PF07497 Rho termination factor, RNA-binding domain APS40_RS10775 PF03653 Uncharacterised protein family (UPF0093) APS40_RS10780 PF01208 Uroporphyrinogen decarboxylase (URO-D) APS40_RS10785 PF02545 Maf-like protein APS40_RS10790 PF01488 Shikimate / quinate 5-dehydrogenase APS40_RS10790 PF08501 Shikimate dehydrogenase substrate binding domain APS40_RS10790 PF18317 Shikimate 5'-dehydrogenase C-terminal domain APS40_RS10795 PF01121 Dephospho-CoA kinase APS40_RS10800 PF00929 Exonuclease APS40_RS10805 PF02556 Preprotein translocase subunit SecB APS40_RS10810 PF04186 FxsA cytoplasmic membrane protein APS40_RS10825 PF01381 Helix-turn-helix APS40_RS10840 PF00005 ABC transporter APS40_RS10840 PF00664 ABC transporter transmembrane region APS40_RS10850 PF00155 Aminotransferase class I and II APS40_RS10855 PF07724 AAA domain (Cdc48 subfamily) APS40_RS10855 PF10431 C-terminal, D2-small domain, of ClpB protein APS40_RS10855 PF00004 ATPase family associated with various cellular activities (AAA) APS40_RS10865 PF00227 Proteasome subunit APS40_RS10870 PF00475 Imidazoleglycerol-phosphate dehydratase APS40_RS10880 PF00117 Glutamine amidotransferase class-I APS40_RS10885 PF00977 Histidine biosynthesis protein APS40_RS10900 PF00977 Histidine biosynthesis protein APS40_RS10905 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APS40_RS10910 PF00485 Phosphoribulokinase / Uridine kinase family APS40_RS10915 PF00294 pfkB family carbohydrate kinase APS40_RS10920 PF02909 Tetracyclin repressor-like, C-terminal domain APS40_RS10920 PF00440 Bacterial regulatory proteins, tetR family APS40_RS10930 PF00730 HhH-GPD superfamily base excision DNA repair protein APS40_RS10930 PF10576 Iron-sulfur binding domain of endonuclease III APS40_RS10930 PF00633 Helix-hairpin-helix motif APS40_RS10940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS40_RS10940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APS40_RS10945 PF00300 Histidine phosphatase superfamily (branch 1) APS40_RS10950 PF01113 Dihydrodipicolinate reductase, N-terminus APS40_RS10950 PF05173 Dihydrodipicolinate reductase, C-terminus APS40_RS10955 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS40_RS10975 PF00226 DnaJ domain APS40_RS10975 PF01556 DnaJ C terminal domain APS40_RS10975 PF00684 DnaJ central domain APS40_RS10980 PF07859 alpha/beta hydrolase fold APS40_RS10985 PF00012 Hsp70 protein APS40_RS11020 PF01025 GrpE APS40_RS11025 PF01628 HrcA protein C terminal domain APS40_RS11030 PF01138 3' exoribonuclease family, domain 1 APS40_RS11030 PF03725 3' exoribonuclease family, domain 2 APS40_RS11035 PF01725 Ham1 family APS40_RS11040 PF04055 Radical SAM superfamily APS40_RS11040 PF06969 HemN C-terminal domain APS40_RS11045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APS40_RS11045 PF14572 Phosphoribosyl synthetase-associated domain APS40_RS11050 PF01979 Amidohydrolase family APS40_RS11050 PF13382 Adenine deaminase C-terminal domain APS40_RS11055 PF01979 Amidohydrolase family APS40_RS11065 PF00109 Beta-ketoacyl synthase, N-terminal domain APS40_RS11065 PF02801 Beta-ketoacyl synthase, C-terminal domain APS40_RS11070 PF07977 FabA-like domain APS40_RS11085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS40_RS11085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS40_RS11090 PF08281 Sigma-70, region 4 APS40_RS11090 PF04542 Sigma-70 region 2 APS40_RS11100 PF17151 Periplasmic sensor domain APS40_RS11100 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS11110 PF00356 Bacterial regulatory proteins, lacI family APS40_RS11130 PF00072 Response regulator receiver domain APS40_RS11130 PF00486 Transcriptional regulatory protein, C terminal APS40_RS11135 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS11145 PF00248 Aldo/keto reductase family APS40_RS11150 PF07690 Major Facilitator Superfamily APS40_RS11160 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS11160 PF00107 Zinc-binding dehydrogenase APS40_RS11165 PF02576 RimP N-terminal domain APS40_RS11165 PF17384 RimP C-terminal SH3 domain APS40_RS11170 PF13184 NusA-like KH domain APS40_RS11170 PF08529 NusA N-terminal domain APS40_RS11170 PF00575 S1 RNA binding domain APS40_RS11180 PF00009 Elongation factor Tu GTP binding domain APS40_RS11180 PF11987 Translation-initiation factor 2 APS40_RS11180 PF04760 Translation initiation factor IF-2, N-terminal region APS40_RS11180 PF08364 Bacterial translation initiation factor IF-2 associated region APS40_RS11190 PF00005 ABC transporter APS40_RS11195 PF00574 Clp protease APS40_RS11205 PF01022 Bacterial regulatory protein, arsR family APS40_RS11210 PF00005 ABC transporter APS40_RS11210 PF17755 UvrA DNA-binding domain APS40_RS11210 PF17760 UvrA interaction domain APS40_RS11225 PF13732 Domain of unknown function (DUF4162) APS40_RS11225 PF00005 ABC transporter APS40_RS11230 PF02909 Tetracyclin repressor-like, C-terminal domain APS40_RS11230 PF00440 Bacterial regulatory proteins, tetR family APS40_RS11235 PF02033 Ribosome-binding factor A APS40_RS11240 PF09157 Pseudouridine synthase II TruB, C-terminal APS40_RS11240 PF16198 tRNA pseudouridylate synthase B C-terminal domain APS40_RS11240 PF01509 TruB family pseudouridylate synthase (N terminal domain) APS40_RS11245 PF07536 HWE histidine kinase APS40_RS11245 PF13426 PAS domain APS40_RS11245 PF13581 Histidine kinase-like ATPase domain APS40_RS11250 PF00312 Ribosomal protein S15 APS40_RS11255 PF00013 KH domain APS40_RS11255 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APS40_RS11255 PF01138 3' exoribonuclease family, domain 1 APS40_RS11255 PF03725 3' exoribonuclease family, domain 2 APS40_RS11255 PF00575 S1 RNA binding domain APS40_RS11265 PF00440 Bacterial regulatory proteins, tetR family APS40_RS11290 PF02390 Putative methyltransferase APS40_RS11295 PF00438 S-adenosylmethionine synthetase, N-terminal domain APS40_RS11295 PF02773 S-adenosylmethionine synthetase, C-terminal domain APS40_RS11295 PF02772 S-adenosylmethionine synthetase, central domain APS40_RS11300 PF00795 Carbon-nitrogen hydrolase APS40_RS11305 PF00144 Beta-lactamase APS40_RS11310 PF00571 CBS domain APS40_RS11310 PF03471 Transporter associated domain APS40_RS11315 PF02130 Uncharacterized protein family UPF0054 APS40_RS11320 PF02562 PhoH-like protein APS40_RS11325 PF04055 Radical SAM superfamily APS40_RS11325 PF00919 Uncharacterized protein family UPF0004 APS40_RS11325 PF01938 TRAM domain APS40_RS11330 PF01053 Cys/Met metabolism PLP-dependent enzyme APS40_RS11345 PF01475 Ferric uptake regulator family APS40_RS11355 PF00814 Glycoprotease family APS40_RS11360 PF01106 NifU-like domain APS40_RS11370 PF00579 tRNA synthetases class I (W and Y) APS40_RS11375 PF00107 Zinc-binding dehydrogenase APS40_RS11375 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS11380 PF00155 Aminotransferase class I and II APS40_RS11390 PF03023 Lipid II flippase MurJ APS40_RS11395 PF01966 HD domain APS40_RS11395 PF08335 GlnD PII-uridylyltransferase APS40_RS11395 PF01909 Nucleotidyltransferase domain APS40_RS11395 PF01842 ACT domain APS40_RS11400 PF01624 MutS domain I APS40_RS11400 PF05188 MutS domain II APS40_RS11400 PF05190 MutS family domain IV APS40_RS11400 PF00488 MutS domain V APS40_RS11400 PF05192 MutS domain III APS40_RS11405 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain APS40_RS11405 PF04616 Glycosyl hydrolases family 43 APS40_RS11410 PF01261 Xylose isomerase-like TIM barrel APS40_RS11415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS40_RS11415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS40_RS11420 PF00356 Bacterial regulatory proteins, lacI family APS40_RS11435 PF06441 Epoxide hydrolase N terminus APS40_RS11440 PF08279 HTH domain APS40_RS11440 PF13280 WYL domain APS40_RS11445 PF06441 Epoxide hydrolase N terminus APS40_RS11475 PF13443 Cro/C1-type HTH DNA-binding domain APS40_RS11515 PF00356 Bacterial regulatory proteins, lacI family APS40_RS11520 PF01547 Bacterial extracellular solute-binding protein APS40_RS11525 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11530 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11535 PF05048 Periplasmic copper-binding protein (NosD) APS40_RS11535 PF18835 Beta helix repeat of Inulin fructotransferase APS40_RS11540 PF00251 Glycosyl hydrolases family 32 N-terminal domain APS40_RS11540 PF08244 Glycosyl hydrolases family 32 C terminal APS40_RS11550 PF07087 Protein of unknown function (DUF1353) APS40_RS11555 PF00182 Chitinase class I APS40_RS11580 PF13335 Magnesium chelatase, subunit ChlI C-terminal APS40_RS11580 PF01078 Magnesium chelatase, subunit ChlI APS40_RS11590 PF03841 L-seryl-tRNA selenium transferase APS40_RS11600 PF09339 IclR helix-turn-helix domain APS40_RS11600 PF01614 Bacterial transcriptional regulator APS40_RS11605 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11625 PF01183 Glycosyl hydrolases family 25 APS40_RS11630 PF01914 MarC family integral membrane protein APS40_RS11650 PF02951 Prokaryotic glutathione synthetase, N-terminal domain APS40_RS11650 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain APS40_RS11655 PF02021 Uncharacterised protein family UPF0102 APS40_RS11660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS40_RS11675 PF01966 HD domain APS40_RS11680 PF07681 DoxX APS40_RS11685 PF01571 Aminomethyltransferase folate-binding domain APS40_RS11690 PF01979 Amidohydrolase family APS40_RS11705 PF00293 NUDIX domain APS40_RS11710 PF02586 SOS response associated peptidase (SRAP) APS40_RS11730 PF01894 Uncharacterised protein family UPF0047 APS40_RS11740 PF01156 Inosine-uridine preferring nucleoside hydrolase APS40_RS11750 PF01048 Phosphorylase superfamily APS40_RS11755 PF00356 Bacterial regulatory proteins, lacI family APS40_RS11760 PF17912 MalK OB fold domain APS40_RS11760 PF00005 ABC transporter APS40_RS11770 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11775 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11785 PF02913 FAD linked oxidases, C-terminal domain APS40_RS11785 PF01565 FAD binding domain APS40_RS11795 PF00300 Histidine phosphatase superfamily (branch 1) APS40_RS11810 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APS40_RS11820 PF01264 Chorismate synthase APS40_RS11830 PF01479 S4 domain APS40_RS11830 PF01728 FtsJ-like methyltransferase APS40_RS11835 PF02630 SCO1/SenC APS40_RS11840 PF02609 Exonuclease VII small subunit APS40_RS11845 PF00850 Histone deacetylase domain APS40_RS11850 PF01300 Telomere recombination APS40_RS11850 PF03481 Putative GTP-binding controlling metal-binding APS40_RS11855 PF01556 DnaJ C terminal domain APS40_RS11855 PF00226 DnaJ domain APS40_RS11860 PF01243 Pyridoxamine 5'-phosphate oxidase APS40_RS11860 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APS40_RS11870 PF01435 Peptidase family M48 APS40_RS11880 PF16123 Hydroxyacylglutathione hydrolase C-terminus APS40_RS11880 PF00753 Metallo-beta-lactamase superfamily APS40_RS11885 PF02632 BioY family APS40_RS11900 PF00072 Response regulator receiver domain APS40_RS11900 PF00486 Transcriptional regulatory protein, C terminal APS40_RS11905 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS11905 PF00672 HAMP domain APS40_RS11915 PF00263 Bacterial type II and III secretion system protein APS40_RS11915 PF04972 BON domain APS40_RS11915 PF13629 Pilus formation protein N terminal region APS40_RS11930 PF01380 SIS domain APS40_RS11930 PF01418 Helix-turn-helix domain, rpiR family APS40_RS11945 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11950 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11950 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS11955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS11960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS11960 PF00005 ABC transporter APS40_RS11970 PF00356 Bacterial regulatory proteins, lacI family APS40_RS11975 PF08532 Beta-galactosidase trimerisation domain APS40_RS11975 PF08533 Beta-galactosidase C-terminal domain APS40_RS11975 PF02449 Beta-galactosidase APS40_RS11980 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11985 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS11990 PF13416 Bacterial extracellular solute-binding protein APS40_RS11995 PF00232 Glycosyl hydrolase family 1 APS40_RS12010 PF03411 Penicillin-insensitive murein endopeptidase APS40_RS12030 PF01168 Alanine racemase, N-terminal domain APS40_RS12030 PF14031 Putative serine dehydratase domain APS40_RS12035 PF07969 Amidohydrolase family APS40_RS12040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS12040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS12045 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS12060 PF00202 Aminotransferase class-III APS40_RS12070 PF01614 Bacterial transcriptional regulator APS40_RS12070 PF09339 IclR helix-turn-helix domain APS40_RS12085 PF08447 PAS fold APS40_RS12085 PF07536 HWE histidine kinase APS40_RS12085 PF13426 PAS domain APS40_RS12095 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS12100 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS12100 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS12105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS12105 PF00005 ABC transporter APS40_RS12110 PF00005 ABC transporter APS40_RS12110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS12115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS12130 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS12130 PF13192 Thioredoxin domain APS40_RS12135 PF00294 pfkB family carbohydrate kinase APS40_RS12150 PF00356 Bacterial regulatory proteins, lacI family APS40_RS12155 PF13382 Adenine deaminase C-terminal domain APS40_RS12155 PF01979 Amidohydrolase family APS40_RS12160 PF02633 Creatinine amidohydrolase APS40_RS12165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APS40_RS12165 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region APS40_RS12170 PF01979 Amidohydrolase family APS40_RS12175 PF01156 Inosine-uridine preferring nucleoside hydrolase APS40_RS12180 PF02608 ABC transporter substrate-binding protein PnrA-like APS40_RS12185 PF00005 ABC transporter APS40_RS12190 PF02653 Branched-chain amino acid transport system / permease component APS40_RS12195 PF02653 Branched-chain amino acid transport system / permease component APS40_RS12200 PF00356 Bacterial regulatory proteins, lacI family APS40_RS12220 PF02653 Branched-chain amino acid transport system / permease component APS40_RS12225 PF02653 Branched-chain amino acid transport system / permease component APS40_RS12230 PF00005 ABC transporter APS40_RS12235 PF13407 Periplasmic binding protein domain APS40_RS12240 PF08220 DeoR-like helix-turn-helix domain APS40_RS12240 PF00455 DeoR C terminal sensor domain APS40_RS12245 PF00596 Class II Aldolase and Adducin N-terminal domain APS40_RS12250 PF01261 Xylose isomerase-like TIM barrel APS40_RS12260 PF00248 Aldo/keto reductase family APS40_RS12265 PF03466 LysR substrate binding domain APS40_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS12275 PF07690 Major Facilitator Superfamily APS40_RS12280 PF07690 Major Facilitator Superfamily APS40_RS12295 PF10996 Beta-Casp domain APS40_RS12295 PF00753 Metallo-beta-lactamase superfamily APS40_RS12295 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain APS40_RS12300 PF00072 Response regulator receiver domain APS40_RS12305 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS12320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS40_RS12320 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS12330 PF00912 Transglycosylase APS40_RS12330 PF00905 Penicillin binding protein transpeptidase domain APS40_RS12335 PF12833 Helix-turn-helix domain APS40_RS12335 PF06719 AraC-type transcriptional regulator N-terminus APS40_RS12345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family APS40_RS12355 PF00204 DNA gyrase B APS40_RS12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS12355 PF01751 Toprim domain APS40_RS12355 PF00986 DNA gyrase B subunit, carboxyl terminus APS40_RS12360 PF02463 RecF/RecN/SMC N terminal domain APS40_RS12365 PF02768 DNA polymerase III beta subunit, C-terminal domain APS40_RS12365 PF02767 DNA polymerase III beta subunit, central domain APS40_RS12365 PF00712 DNA polymerase III beta subunit, N-terminal domain APS40_RS12375 PF00308 Bacterial dnaA protein APS40_RS12375 PF08299 Bacterial dnaA protein helix-turn-helix APS40_RS12375 PF11638 DnaA N-terminal domain APS40_RS12380 PF01649 Ribosomal protein S20 APS40_RS12385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APS40_RS12385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APS40_RS12385 PF06827 Zinc finger found in FPG and IleRS APS40_RS12390 PF01209 ubiE/COQ5 methyltransferase family APS40_RS12395 PF03109 ABC1 family APS40_RS12405 PF00692 dUTPase APS40_RS12415 PF00581 Rhodanese-like domain APS40_RS12415 PF00899 ThiF family APS40_RS12420 PF00248 Aldo/keto reductase family APS40_RS12425 PF00005 ABC transporter APS40_RS12425 PF16326 ABC transporter C-terminal domain APS40_RS12430 PF02082 Transcriptional regulator APS40_RS12435 PF00248 Aldo/keto reductase family APS40_RS12445 PF03389 MobA/MobL family APS40_RS12445 PF17841 BID domain of Bartonella effector protein (Bep) APS40_RS12445 PF01443 Viral (Superfamily 1) RNA helicase APS40_RS12450 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS40_RS12475 PF01425 Amidase APS40_RS12485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS12485 PF13378 Enolase C-terminal domain-like APS40_RS12505 PF06964 Alpha-L-arabinofuranosidase C-terminal domain APS40_RS12540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS40_RS12540 PF13360 PQQ-like domain APS40_RS12550 PF00356 Bacterial regulatory proteins, lacI family APS40_RS12565 PF13378 Enolase C-terminal domain-like APS40_RS12565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS12575 PF13416 Bacterial extracellular solute-binding protein APS40_RS12580 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS12585 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS12590 PF17912 MalK OB fold domain APS40_RS12590 PF00005 ABC transporter APS40_RS12595 PF13378 Enolase C-terminal domain-like APS40_RS12595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS12600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS12600 PF13378 Enolase C-terminal domain-like APS40_RS12605 PF13378 Enolase C-terminal domain-like APS40_RS12605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS12610 PF03737 Aldolase/RraA APS40_RS12615 PF01545 Cation efflux family APS40_RS12615 PF16916 Dimerisation domain of Zinc Transporter APS40_RS12620 PF02583 Metal-sensitive transcriptional repressor APS40_RS12630 PF03786 D-mannonate dehydratase (UxuA) APS40_RS12635 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS12640 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS12655 PF00005 ABC transporter APS40_RS12665 PF02653 Branched-chain amino acid transport system / permease component APS40_RS12670 PF02653 Branched-chain amino acid transport system / permease component APS40_RS12675 PF13378 Enolase C-terminal domain-like APS40_RS12675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS12680 PF09339 IclR helix-turn-helix domain APS40_RS12680 PF01614 Bacterial transcriptional regulator APS40_RS12685 PF05336 L-rhamnose mutarotase APS40_RS12690 PF00701 Dihydrodipicolinate synthetase family APS40_RS12695 PF00248 Aldo/keto reductase family APS40_RS12705 PF02322 Cytochrome bd terminal oxidase subunit II APS40_RS12710 PF01654 Cytochrome bd terminal oxidase subunit I APS40_RS12715 PF00664 ABC transporter transmembrane region APS40_RS12715 PF00005 ABC transporter APS40_RS12720 PF00005 ABC transporter APS40_RS12720 PF00664 ABC transporter transmembrane region APS40_RS12725 PF00027 Cyclic nucleotide-binding domain APS40_RS12725 PF13545 Crp-like helix-turn-helix domain APS40_RS12735 PF00005 ABC transporter APS40_RS12745 PF07690 Major Facilitator Superfamily APS40_RS12750 PF01638 HxlR-like helix-turn-helix APS40_RS12765 PF07995 Glucose / Sorbosone dehydrogenase APS40_RS12775 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APS40_RS12775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS40_RS12785 PF14489 QueF-like protein APS40_RS12815 PF00578 AhpC/TSA family APS40_RS12815 PF10417 C-terminal domain of 1-Cys peroxiredoxin APS40_RS12850 PF00223 Photosystem I psaA/psaB protein APS40_RS12850 PF00691 OmpA family APS40_RS12860 PF13532 2OG-Fe(II) oxygenase superfamily APS40_RS12875 PF01699 Sodium/calcium exchanger protein APS40_RS12895 PF03144 Elongation factor Tu domain 2 APS40_RS12895 PF00679 Elongation factor G C-terminus APS40_RS12895 PF00009 Elongation factor Tu GTP binding domain APS40_RS12895 PF06421 GTP-binding protein LepA C-terminus APS40_RS12915 PF02926 THUMP domain APS40_RS12915 PF01170 Putative RNA methylase family UPF0020 APS40_RS12920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS12920 PF03466 LysR substrate binding domain APS40_RS12930 PF00781 Diacylglycerol kinase catalytic domain APS40_RS12935 PF04299 Putative FMN-binding domain APS40_RS12945 PF05199 GMC oxidoreductase APS40_RS12945 PF00732 GMC oxidoreductase APS40_RS12970 PF03466 LysR substrate binding domain APS40_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS12975 PF17773 UPF0176 acylphosphatase like domain APS40_RS12975 PF00581 Rhodanese-like domain APS40_RS12980 PF00248 Aldo/keto reductase family APS40_RS12990 PF01588 Putative tRNA binding domain APS40_RS12990 PF03483 B3/4 domain APS40_RS12990 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APS40_RS12990 PF03147 Ferredoxin-fold anticodon binding domain APS40_RS12990 PF03484 tRNA synthetase B5 domain APS40_RS13000 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APS40_RS13000 PF01409 tRNA synthetases class II core domain (F) APS40_RS13005 PF00453 Ribosomal protein L20 APS40_RS13010 PF01632 Ribosomal protein L35 APS40_RS13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS13025 PF03466 LysR substrate binding domain APS40_RS13040 PF05198 Translation initiation factor IF-3, N-terminal domain APS40_RS13040 PF00707 Translation initiation factor IF-3, C-terminal domain APS40_RS13055 PF11480 Colicin-E5 Imm protein APS40_RS13070 PF08331 Domain of unknown function (DUF1730) APS40_RS13075 PF00043 Glutathione S-transferase, C-terminal domain APS40_RS13075 PF13417 Glutathione S-transferase, N-terminal domain APS40_RS13080 PF02673 Bacitracin resistance protein BacA APS40_RS13085 PF03932 CutC family APS40_RS13090 PF00480 ROK family APS40_RS13095 PF00356 Bacterial regulatory proteins, lacI family APS40_RS13100 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS40_RS13105 PF01112 Asparaginase APS40_RS13110 PF00005 ABC transporter APS40_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS13120 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS13125 PF17969 L,D-transpeptidase C-terminal domain APS40_RS13125 PF01476 LysM domain APS40_RS13125 PF03734 L,D-transpeptidase catalytic domain APS40_RS13130 PF00797 N-acetyltransferase APS40_RS13145 PF00294 pfkB family carbohydrate kinase APS40_RS13155 PF00535 Glycosyl transferase family 2 APS40_RS13160 PF00535 Glycosyl transferase family 2 APS40_RS13165 PF00011 Hsp20/alpha crystallin family APS40_RS13180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS40_RS13185 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus APS40_RS13185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APS40_RS13190 PF04552 Sigma-54, DNA binding domain APS40_RS13190 PF04963 Sigma-54 factor, core binding domain APS40_RS13190 PF00309 Sigma-54 factor, Activator interacting domain (AID) APS40_RS13195 PF00005 ABC transporter APS40_RS13210 PF01612 3'-5' exonuclease APS40_RS13210 PF00476 DNA polymerase family A APS40_RS13215 PF02719 Polysaccharide biosynthesis protein APS40_RS13220 PF00149 Calcineurin-like phosphoesterase APS40_RS13230 PF01053 Cys/Met metabolism PLP-dependent enzyme APS40_RS13235 PF00583 Acetyltransferase (GNAT) family APS40_RS13265 PF01979 Amidohydrolase family APS40_RS13275 PF03328 HpcH/HpaI aldolase/citrate lyase family APS40_RS13300 PF01370 NAD dependent epimerase/dehydratase family APS40_RS13305 PF00392 Bacterial regulatory proteins, gntR family APS40_RS13305 PF07729 FCD domain APS40_RS13310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS13315 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS13320 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS13325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS13325 PF00005 ABC transporter APS40_RS13330 PF00005 ABC transporter APS40_RS13330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS13335 PF00701 Dihydrodipicolinate synthetase family APS40_RS13345 PF01070 FMN-dependent dehydrogenase APS40_RS13360 PF00202 Aminotransferase class-III APS40_RS13370 PF01063 Amino-transferase class IV APS40_RS13385 PF04321 RmlD substrate binding domain APS40_RS13395 PF13280 WYL domain APS40_RS13395 PF08279 HTH domain APS40_RS13405 PF04055 Radical SAM superfamily APS40_RS13415 PF02614 Glucuronate isomerase APS40_RS13420 PF07883 Cupin domain APS40_RS13435 PF00012 Hsp70 protein APS40_RS13445 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS13445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS13450 PF00072 Response regulator receiver domain APS40_RS13450 PF00486 Transcriptional regulatory protein, C terminal APS40_RS13490 PF00230 Major intrinsic protein APS40_RS13505 PF02224 Cytidylate kinase APS40_RS13510 PF00575 S1 RNA binding domain APS40_RS13525 PF00196 Bacterial regulatory proteins, luxR family APS40_RS13530 PF00665 Integrase core domain APS40_RS13530 PF13936 Helix-turn-helix domain APS40_RS13535 PF01343 Peptidase family S49 APS40_RS13540 PF00216 Bacterial DNA-binding protein APS40_RS13550 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APS40_RS13555 PF00291 Pyridoxal-phosphate dependent enzyme APS40_RS13560 PF00290 Tryptophan synthase alpha chain APS40_RS13565 PF01039 Carboxyl transferase domain APS40_RS13570 PF08245 Mur ligase middle domain APS40_RS13570 PF02875 Mur ligase family, glutamate ligase domain APS40_RS13575 PF00933 Glycosyl hydrolase family 3 N terminal domain APS40_RS13580 PF00085 Thioredoxin APS40_RS13585 PF00085 Thioredoxin APS40_RS13590 PF13361 UvrD-like helicase C-terminal domain APS40_RS13590 PF00580 UvrD/REP helicase N-terminal domain APS40_RS13590 PF12705 PD-(D/E)XK nuclease superfamily APS40_RS13600 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APS40_RS13605 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS13605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS13610 PF05221 S-adenosyl-L-homocysteine hydrolase APS40_RS13610 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APS40_RS13620 PF00381 PTS HPr component phosphorylation site APS40_RS13625 PF03830 PTS system sorbose subfamily IIB component APS40_RS13625 PF03610 PTS system fructose IIA component APS40_RS13630 PF02603 HPr Serine kinase N terminus APS40_RS13630 PF07475 HPr Serine kinase C-terminal domain APS40_RS13635 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS13635 PF00672 HAMP domain APS40_RS13635 PF13756 Stimulus-sensing domain APS40_RS13635 PF13755 Sensor N-terminal transmembrane domain APS40_RS13640 PF00486 Transcriptional regulatory protein, C terminal APS40_RS13640 PF00072 Response regulator receiver domain APS40_RS13645 PF01293 Phosphoenolpyruvate carboxykinase APS40_RS13655 PF13419 Haloacid dehalogenase-like hydrolase APS40_RS13670 PF00561 alpha/beta hydrolase fold APS40_RS13695 PF04993 TfoX N-terminal domain APS40_RS13700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APS40_RS13700 PF01367 5'-3' exonuclease, C-terminal SAM fold APS40_RS13700 PF01612 3'-5' exonuclease APS40_RS13700 PF00476 DNA polymerase family A APS40_RS13705 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS13705 PF00107 Zinc-binding dehydrogenase APS40_RS13720 PF00230 Major intrinsic protein APS40_RS13725 PF00072 Response regulator receiver domain APS40_RS13725 PF00196 Bacterial regulatory proteins, luxR family APS40_RS13745 PF00849 RNA pseudouridylate synthase APS40_RS13785 PF07568 Histidine kinase APS40_RS13785 PF12282 Signal transduction histidine kinase APS40_RS13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS13790 PF02615 Malate/L-lactate dehydrogenase APS40_RS13795 PF05544 Proline racemase APS40_RS13800 PF13378 Enolase C-terminal domain-like APS40_RS13800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS13805 PF05544 Proline racemase APS40_RS13810 PF01266 FAD dependent oxidoreductase APS40_RS13815 PF00005 ABC transporter APS40_RS13820 PF00005 ABC transporter APS40_RS13820 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS40_RS13825 PF02653 Branched-chain amino acid transport system / permease component APS40_RS13825 PF11862 Domain of unknown function (DUF3382) APS40_RS13830 PF02653 Branched-chain amino acid transport system / permease component APS40_RS13835 PF13458 Periplasmic binding protein APS40_RS13840 PF13378 Enolase C-terminal domain-like APS40_RS13840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS13845 PF13378 Enolase C-terminal domain-like APS40_RS13845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS13850 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS13860 PF13180 PDZ domain APS40_RS13875 PF07690 Major Facilitator Superfamily APS40_RS13895 PF00962 Adenosine/AMP deaminase APS40_RS13900 PF17912 MalK OB fold domain APS40_RS13900 PF00005 ABC transporter APS40_RS13905 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS13910 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS13920 PF01156 Inosine-uridine preferring nucleoside hydrolase APS40_RS13925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS13925 PF03466 LysR substrate binding domain APS40_RS13935 PF00072 Response regulator receiver domain APS40_RS13945 PF00072 Response regulator receiver domain APS40_RS13950 PF01584 CheW-like domain APS40_RS13950 PF01627 Hpt domain APS40_RS13950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS13950 PF09078 CheY binding APS40_RS13950 PF02895 Signal transducing histidine kinase, homodimeric domain APS40_RS13955 PF01584 CheW-like domain APS40_RS13960 PF02203 Tar ligand binding domain homologue APS40_RS13960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS13960 PF00672 HAMP domain APS40_RS13965 PF00672 HAMP domain APS40_RS13965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS40_RS13965 PF02203 Tar ligand binding domain homologue APS40_RS13970 PF01584 CheW-like domain APS40_RS13975 PF01739 CheR methyltransferase, SAM binding domain APS40_RS13975 PF03705 CheR methyltransferase, all-alpha domain APS40_RS13980 PF01339 CheB methylesterase APS40_RS13980 PF00072 Response regulator receiver domain APS40_RS14000 PF00356 Bacterial regulatory proteins, lacI family APS40_RS14005 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14010 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14020 PF03747 ADP-ribosylglycohydrolase APS40_RS14030 PF02515 CoA-transferase family III APS40_RS14035 PF03328 HpcH/HpaI aldolase/citrate lyase family APS40_RS14040 PF13188 PAS domain APS40_RS14040 PF03707 Bacterial signalling protein N terminal repeat APS40_RS14040 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS14040 PF00563 EAL domain APS40_RS14045 PF12833 Helix-turn-helix domain APS40_RS14050 PF11975 Family 4 glycosyl hydrolase C-terminal domain APS40_RS14050 PF02056 Family 4 glycosyl hydrolase APS40_RS14060 PF01312 FlhB HrpN YscU SpaS Family APS40_RS14065 PF14031 Putative serine dehydratase domain APS40_RS14065 PF01168 Alanine racemase, N-terminal domain APS40_RS14070 PF02838 Glycosyl hydrolase family 20, domain 2 APS40_RS14070 PF00728 Glycosyl hydrolase family 20, catalytic domain APS40_RS14080 PF00563 EAL domain APS40_RS14080 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS14080 PF08448 PAS fold APS40_RS14080 PF08447 PAS fold APS40_RS14095 PF09084 NMT1/THI5 like APS40_RS14100 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14105 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14110 PF00005 ABC transporter APS40_RS14115 PF01979 Amidohydrolase family APS40_RS14120 PF04480 Protein of unknown function (DUF559) APS40_RS14125 PF07687 Peptidase dimerisation domain APS40_RS14125 PF01546 Peptidase family M20/M25/M40 APS40_RS14135 PF00171 Aldehyde dehydrogenase family APS40_RS14140 PF00202 Aminotransferase class-III APS40_RS14145 PF08362 YcdC-like protein, C-terminal region APS40_RS14145 PF00440 Bacterial regulatory proteins, tetR family APS40_RS14170 PF00892 EamA-like transporter family APS40_RS14180 PF03707 Bacterial signalling protein N terminal repeat APS40_RS14180 PF00563 EAL domain APS40_RS14180 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS14190 PF01180 Dihydroorotate dehydrogenase APS40_RS14195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS40_RS14195 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS14200 PF03330 Lytic transglycolase APS40_RS14215 PF07969 Amidohydrolase family APS40_RS14220 PF06299 Protein of unknown function (DUF1045) APS40_RS14230 PF13660 Domain of unknown function (DUF4147) APS40_RS14230 PF05161 MOFRL family APS40_RS14240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS14260 PF00248 Aldo/keto reductase family APS40_RS14265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS40_RS14270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS14275 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14280 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS14280 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14285 PF00005 ABC transporter APS40_RS14285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS14290 PF00005 ABC transporter APS40_RS14290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS14295 PF08448 PAS fold APS40_RS14295 PF08447 PAS fold APS40_RS14295 PF00563 EAL domain APS40_RS14295 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS14305 PF00950 ABC 3 transport family APS40_RS14310 PF00005 ABC transporter APS40_RS14315 PF01297 Zinc-uptake complex component A periplasmic APS40_RS14325 PF13192 Thioredoxin domain APS40_RS14325 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS14335 PF01494 FAD binding domain APS40_RS14360 PF02492 CobW/HypB/UreG, nucleotide-binding domain APS40_RS14360 PF07683 Cobalamin synthesis protein cobW C-terminal domain APS40_RS14365 PF02514 CobN/Magnesium Chelatase APS40_RS14370 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP APS40_RS14390 PF00375 Sodium:dicarboxylate symporter family APS40_RS14395 PF01545 Cation efflux family APS40_RS14395 PF16916 Dimerisation domain of Zinc Transporter APS40_RS14400 PF01903 CbiX APS40_RS14415 PF02570 Precorrin-8X methylmutase APS40_RS14420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS40_RS14425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS40_RS14430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS40_RS14430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS40_RS14435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS40_RS14440 PF02571 Precorrin-6x reductase CbiJ/CobK APS40_RS14445 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS40_RS14445 PF07685 CobB/CobQ-like glutamine amidotransferase domain APS40_RS14450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS40_RS14455 PF07685 CobB/CobQ-like glutamine amidotransferase domain APS40_RS14455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS40_RS14460 PF03186 CobD/Cbib protein APS40_RS14465 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase APS40_RS14470 PF01869 BadF/BadG/BcrA/BcrD ATPase family APS40_RS14475 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APS40_RS14475 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APS40_RS14480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APS40_RS14485 PF00920 Dehydratase family APS40_RS14495 PF01047 MarR family APS40_RS14510 PF01022 Bacterial regulatory protein, arsR family APS40_RS14540 PF01381 Helix-turn-helix APS40_RS14545 PF02608 ABC transporter substrate-binding protein PnrA-like APS40_RS14550 PF00005 ABC transporter APS40_RS14555 PF02653 Branched-chain amino acid transport system / permease component APS40_RS14560 PF02653 Branched-chain amino acid transport system / permease component APS40_RS14565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APS40_RS14570 PF01791 DeoC/LacD family aldolase APS40_RS14575 PF00171 Aldehyde dehydrogenase family APS40_RS14585 PF00529 HlyD membrane-fusion protein of T1SS APS40_RS14585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS40_RS14605 PF00591 Glycosyl transferase family, a/b domain APS40_RS14605 PF02885 Glycosyl transferase family, helical bundle domain APS40_RS14605 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain APS40_RS14610 PF01676 Metalloenzyme superfamily APS40_RS14635 PF13629 Pilus formation protein N terminal region APS40_RS14635 PF00263 Bacterial type II and III secretion system protein APS40_RS14635 PF04972 BON domain APS40_RS14655 PF00263 Bacterial type II and III secretion system protein APS40_RS14655 PF04972 BON domain APS40_RS14655 PF13629 Pilus formation protein N terminal region APS40_RS14665 PF00437 Type II/IV secretion system protein APS40_RS14685 PF02789 Cytosol aminopeptidase family, N-terminal domain APS40_RS14685 PF00883 Cytosol aminopeptidase family, catalytic domain APS40_RS14695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS40_RS14700 PF00034 Cytochrome c APS40_RS14705 PF00800 Prephenate dehydratase APS40_RS14705 PF01817 Chorismate mutase type II APS40_RS14705 PF01842 ACT domain APS40_RS14720 PF12169 DNA polymerase III subunits gamma and tau domain III APS40_RS14720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding APS40_RS14720 PF12170 DNA polymerase III tau subunit V interacting with alpha APS40_RS14725 PF02575 YbaB/EbfC DNA-binding family APS40_RS14730 PF02132 RecR protein APS40_RS14730 PF13662 Toprim domain APS40_RS14740 PF00563 EAL domain APS40_RS14740 PF13188 PAS domain APS40_RS14740 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS14740 PF03707 Bacterial signalling protein N terminal repeat APS40_RS14750 PF01327 Polypeptide deformylase APS40_RS14755 PF00551 Formyl transferase APS40_RS14755 PF02911 Formyl transferase, C-terminal domain APS40_RS14760 PF01416 tRNA pseudouridine synthase APS40_RS14780 PF01546 Peptidase family M20/M25/M40 APS40_RS14780 PF07687 Peptidase dimerisation domain APS40_RS14785 PF14602 Hexapeptide repeat of succinyl-transferase APS40_RS14785 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APS40_RS14785 PF00132 Bacterial transferase hexapeptide (six repeats) APS40_RS14800 PF00440 Bacterial regulatory proteins, tetR family APS40_RS14800 PF02909 Tetracyclin repressor-like, C-terminal domain APS40_RS14805 PF07690 Major Facilitator Superfamily APS40_RS14820 PF00696 Amino acid kinase family APS40_RS14835 PF02469 Fasciclin domain APS40_RS14840 PF01641 SelR domain APS40_RS14845 PF00117 Glutamine amidotransferase class-I APS40_RS14845 PF00958 GMP synthase C terminal domain APS40_RS14845 PF02540 NAD synthase APS40_RS14850 PF01926 50S ribosome-binding GTPase APS40_RS14860 PF14849 YidC periplasmic domain APS40_RS14860 PF02096 60Kd inner membrane protein APS40_RS14870 PF00468 Ribosomal protein L34 APS40_RS14875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS40_RS14875 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS14880 PF00672 HAMP domain APS40_RS14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS14880 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS14880 PF16527 Two-component sensor protein CpxA, periplasmic domain APS40_RS14890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS40_RS14890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APS40_RS14900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS40_RS14900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS40_RS14905 PF01261 Xylose isomerase-like TIM barrel APS40_RS14910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS14910 PF00005 ABC transporter APS40_RS14915 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14915 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS14935 PF00356 Bacterial regulatory proteins, lacI family APS40_RS14940 PF00356 Bacterial regulatory proteins, lacI family APS40_RS14950 PF01547 Bacterial extracellular solute-binding protein APS40_RS14960 PF00529 HlyD membrane-fusion protein of T1SS APS40_RS14960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS40_RS14965 PF00873 AcrB/AcrD/AcrF family APS40_RS14970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS40_RS14970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS40_RS14975 PF08125 Mannitol dehydrogenase C-terminal domain APS40_RS14975 PF01232 Mannitol dehydrogenase Rossmann domain APS40_RS14980 PF00005 ABC transporter APS40_RS14980 PF08402 TOBE domain APS40_RS14985 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS14990 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15000 PF04198 Putative sugar-binding domain APS40_RS15005 PF00989 PAS fold APS40_RS15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS15005 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS15005 PF00672 HAMP domain APS40_RS15005 PF18698 Histidine kinase sensor domain APS40_RS15015 PF00486 Transcriptional regulatory protein, C terminal APS40_RS15015 PF00072 Response regulator receiver domain APS40_RS15020 PF01381 Helix-turn-helix APS40_RS15020 PF06114 IrrE N-terminal-like domain APS40_RS15020 PF09856 Predicted transcriptional regulator (DUF2083) APS40_RS15035 PF02653 Branched-chain amino acid transport system / permease component APS40_RS15040 PF00005 ABC transporter APS40_RS15040 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS40_RS15045 PF00005 ABC transporter APS40_RS15090 PF02975 Methylamine dehydrogenase, L chain APS40_RS15095 PF00578 AhpC/TSA family APS40_RS15100 PF07291 Methylamine utilisation protein MauE APS40_RS15105 PF06433 Methylamine dehydrogenase heavy chain (MADH) APS40_RS15110 PF14525 AraC-binding-like domain APS40_RS15110 PF12833 Helix-turn-helix domain APS40_RS15115 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain APS40_RS15115 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APS40_RS15120 PF07690 Major Facilitator Superfamily APS40_RS15130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS15130 PF00005 ABC transporter APS40_RS15135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS15135 PF00005 ABC transporter APS40_RS15140 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15140 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS15145 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15150 PF00392 Bacterial regulatory proteins, gntR family APS40_RS15150 PF07729 FCD domain APS40_RS15155 PF00672 HAMP domain APS40_RS15155 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS15155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS15160 PF00072 Response regulator receiver domain APS40_RS15160 PF00486 Transcriptional regulatory protein, C terminal APS40_RS15185 PF00356 Bacterial regulatory proteins, lacI family APS40_RS15190 PF00005 ABC transporter APS40_RS15195 PF02653 Branched-chain amino acid transport system / permease component APS40_RS15200 PF13407 Periplasmic binding protein domain APS40_RS15220 PF07729 FCD domain APS40_RS15220 PF00392 Bacterial regulatory proteins, gntR family APS40_RS15225 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15230 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15240 PF17912 MalK OB fold domain APS40_RS15240 PF00005 ABC transporter APS40_RS15245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS15245 PF13378 Enolase C-terminal domain-like APS40_RS15280 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15285 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15290 PF00701 Dihydrodipicolinate synthetase family APS40_RS15295 PF13378 Enolase C-terminal domain-like APS40_RS15295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS15300 PF05199 GMC oxidoreductase APS40_RS15300 PF00732 GMC oxidoreductase APS40_RS15310 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15315 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15330 PF12697 Alpha/beta hydrolase family APS40_RS15335 PF07969 Amidohydrolase family APS40_RS15350 PF02653 Branched-chain amino acid transport system / permease component APS40_RS15355 PF02653 Branched-chain amino acid transport system / permease component APS40_RS15360 PF00005 ABC transporter APS40_RS15365 PF13407 Periplasmic binding protein domain APS40_RS15370 PF00392 Bacterial regulatory proteins, gntR family APS40_RS15370 PF07702 UTRA domain APS40_RS15375 PF00364 Biotin-requiring enzyme APS40_RS15375 PF02817 e3 binding domain APS40_RS15375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS40_RS15380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS40_RS15380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS40_RS15380 PF01842 ACT domain APS40_RS15385 PF00676 Dehydrogenase E1 component APS40_RS15390 PF03328 HpcH/HpaI aldolase/citrate lyase family APS40_RS15395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS15395 PF13378 Enolase C-terminal domain-like APS40_RS15405 PF00456 Transketolase, thiamine diphosphate binding domain APS40_RS15410 PF02780 Transketolase, C-terminal domain APS40_RS15410 PF02779 Transketolase, pyrimidine binding domain APS40_RS15415 PF13378 Enolase C-terminal domain-like APS40_RS15415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS15420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APS40_RS15420 PF00356 Bacterial regulatory proteins, lacI family APS40_RS15425 PF02653 Branched-chain amino acid transport system / permease component APS40_RS15435 PF00005 ABC transporter APS40_RS15440 PF01263 Aldose 1-epimerase APS40_RS15460 PF06472 ABC transporter transmembrane region 2 APS40_RS15460 PF00005 ABC transporter APS40_RS15465 PF00593 TonB dependent receptor APS40_RS15465 PF07715 TonB-dependent Receptor Plug Domain APS40_RS15470 PF06776 Invasion associated locus B (IalB) protein APS40_RS15475 PF01243 Pyridoxamine 5'-phosphate oxidase APS40_RS15490 PF01618 MotA/TolQ/ExbB proton channel family APS40_RS15505 PF00092 von Willebrand factor type A domain APS40_RS15505 PF07584 Aerotolerance regulator N-terminal APS40_RS15510 PF01882 Protein of unknown function DUF58 APS40_RS15515 PF07726 ATPase family associated with various cellular activities (AAA) APS40_RS15515 PF17863 AAA lid domain APS40_RS15520 PF00595 PDZ domain APS40_RS15520 PF13180 PDZ domain APS40_RS15530 PF13632 Glycosyl transferase family group 2 APS40_RS15535 PF04349 Periplasmic glucan biosynthesis protein, MdoG APS40_RS15555 PF00561 alpha/beta hydrolase fold APS40_RS15580 PF12697 Alpha/beta hydrolase family APS40_RS15585 PF09382 RQC domain APS40_RS15585 PF16124 RecQ zinc-binding APS40_RS15585 PF00570 HRDC domain APS40_RS15585 PF00271 Helicase conserved C-terminal domain APS40_RS15585 PF00270 DEAD/DEAH box helicase APS40_RS15595 PF08482 ATP-dependent helicase C-terminal APS40_RS15595 PF04408 Helicase associated domain (HA2) APS40_RS15595 PF00270 DEAD/DEAH box helicase APS40_RS15595 PF00271 Helicase conserved C-terminal domain APS40_RS15605 PF08447 PAS fold APS40_RS15605 PF08448 PAS fold APS40_RS15605 PF00563 EAL domain APS40_RS15605 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS15610 PF02073 Thermophilic metalloprotease (M29) APS40_RS15615 PF03976 Polyphosphate kinase 2 (PPK2) APS40_RS15620 PF00211 Adenylate and Guanylate cyclase catalytic domain APS40_RS15630 PF09370 Phosphoenolpyruvate hydrolase-like APS40_RS15650 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15655 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15665 PF00005 ABC transporter APS40_RS15665 PF03459 TOBE domain APS40_RS15665 PF17912 MalK OB fold domain APS40_RS15670 PF00005 ABC transporter APS40_RS15670 PF17912 MalK OB fold domain APS40_RS15680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS15680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS15685 PF01261 Xylose isomerase-like TIM barrel APS40_RS15690 PF10282 Lactonase, 7-bladed beta-propeller APS40_RS15695 PF07690 Major Facilitator Superfamily APS40_RS15700 PF16363 GDP-mannose 4,6 dehydratase APS40_RS15705 PF00392 Bacterial regulatory proteins, gntR family APS40_RS15710 PF00005 ABC transporter APS40_RS15725 PF01212 Beta-eliminating lyase APS40_RS15730 PF00107 Zinc-binding dehydrogenase APS40_RS15730 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS15755 PF07690 Major Facilitator Superfamily APS40_RS15775 PF03466 LysR substrate binding domain APS40_RS15775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS15780 PF00294 pfkB family carbohydrate kinase APS40_RS15785 PF08125 Mannitol dehydrogenase C-terminal domain APS40_RS15785 PF01232 Mannitol dehydrogenase Rossmann domain APS40_RS15795 PF00465 Iron-containing alcohol dehydrogenase APS40_RS15800 PF00171 Aldehyde dehydrogenase family APS40_RS15805 PF00120 Glutamine synthetase, catalytic domain APS40_RS15805 PF03951 Glutamine synthetase, beta-Grasp domain APS40_RS15810 PF13520 Amino acid permease APS40_RS15820 PF03976 Polyphosphate kinase 2 (PPK2) APS40_RS15825 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS15825 PF16736 Single Cache-like APS40_RS15825 PF00989 PAS fold APS40_RS15830 PF12849 PBP superfamily domain APS40_RS15835 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15840 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS15845 PF00005 ABC transporter APS40_RS15850 PF01895 PhoU domain APS40_RS15855 PF00072 Response regulator receiver domain APS40_RS15855 PF00486 Transcriptional regulatory protein, C terminal APS40_RS15860 PF01425 Amidase APS40_RS15870 PF00248 Aldo/keto reductase family APS40_RS15875 PF01738 Dienelactone hydrolase family APS40_RS15895 PF00202 Aminotransferase class-III APS40_RS15900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS40_RS15900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS40_RS15905 PF01430 Hsp33 protein APS40_RS15920 PF02687 FtsX-like permease family APS40_RS15920 PF12704 MacB-like periplasmic core domain APS40_RS15920 PF00005 ABC transporter APS40_RS15925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS40_RS15950 PF13193 AMP-binding enzyme C-terminal domain APS40_RS15950 PF00501 AMP-binding enzyme APS40_RS15960 PF01053 Cys/Met metabolism PLP-dependent enzyme APS40_RS15965 PF00692 dUTPase APS40_RS16000 PF00989 PAS fold APS40_RS16000 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS16000 PF00989 PAS fold APS40_RS16000 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS16005 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS16010 PF00211 Adenylate and Guanylate cyclase catalytic domain APS40_RS16010 PF13191 AAA ATPase domain APS40_RS16015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APS40_RS16020 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS40_RS16025 PF00510 Cytochrome c oxidase subunit III APS40_RS16030 PF00510 Cytochrome c oxidase subunit III APS40_RS16040 PF00034 Cytochrome c APS40_RS16045 PF00356 Bacterial regulatory proteins, lacI family APS40_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16070 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16090 PF01266 FAD dependent oxidoreductase APS40_RS16095 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS40_RS16105 PF01921 tRNA synthetases class I (K) APS40_RS16115 PF01180 Dihydroorotate dehydrogenase APS40_RS16120 PF01554 MatE APS40_RS16130 PF00270 DEAD/DEAH box helicase APS40_RS16130 PF08494 DEAD/H associated APS40_RS16130 PF00271 Helicase conserved C-terminal domain APS40_RS16150 PF01925 Sulfite exporter TauE/SafE APS40_RS16155 PF03193 RsgA GTPase APS40_RS16175 PF00072 Response regulator receiver domain APS40_RS16175 PF00196 Bacterial regulatory proteins, luxR family APS40_RS16180 PF00989 PAS fold APS40_RS16180 PF13426 PAS domain APS40_RS16180 PF13188 PAS domain APS40_RS16180 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS16185 PF01741 Large-conductance mechanosensitive channel, MscL APS40_RS16190 PF13417 Glutathione S-transferase, N-terminal domain APS40_RS16200 PF00155 Aminotransferase class I and II APS40_RS16220 PF00691 OmpA family APS40_RS16220 PF13488 Glycine zipper APS40_RS16230 PF01476 LysM domain APS40_RS16230 PF03734 L,D-transpeptidase catalytic domain APS40_RS16230 PF17969 L,D-transpeptidase C-terminal domain APS40_RS16245 PF13180 PDZ domain APS40_RS16250 PF13180 PDZ domain APS40_RS16255 PF00196 Bacterial regulatory proteins, luxR family APS40_RS16265 PF00485 Phosphoribulokinase / Uridine kinase family APS40_RS16270 PF04127 DNA / pantothenate metabolism flavoprotein APS40_RS16270 PF02441 Flavoprotein APS40_RS16275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS16275 PF00005 ABC transporter APS40_RS16280 PF00005 ABC transporter APS40_RS16280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS16285 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16285 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS16290 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS16305 PF01418 Helix-turn-helix domain, rpiR family APS40_RS16305 PF01380 SIS domain APS40_RS16310 PF13580 SIS domain APS40_RS16315 PF01547 Bacterial extracellular solute-binding protein APS40_RS16320 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16325 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16330 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS16335 PF00486 Transcriptional regulatory protein, C terminal APS40_RS16335 PF00072 Response regulator receiver domain APS40_RS16340 PF13533 Biotin-lipoyl like APS40_RS16345 PF00873 AcrB/AcrD/AcrF family APS40_RS16350 PF02321 Outer membrane efflux protein APS40_RS16360 PF03334 Na+/H+ antiporter subunit APS40_RS16365 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) APS40_RS16370 PF01899 Na+/H+ ion antiporter subunit APS40_RS16375 PF00361 Proton-conducting membrane transporter APS40_RS16380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APS40_RS16385 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APS40_RS16385 PF00361 Proton-conducting membrane transporter APS40_RS16385 PF13244 Domain of unknown function (DUF4040) APS40_RS16385 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter APS40_RS16395 PF02525 Flavodoxin-like fold APS40_RS16410 PF03884 DNA gyrase inhibitor YacG APS40_RS16415 PF02545 Maf-like protein APS40_RS16420 PF01176 Translation initiation factor 1A / IF-1 APS40_RS16425 PF06793 Uncharacterised protein family (UPF0262) APS40_RS16430 PF00815 Histidinol dehydrogenase APS40_RS16440 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS40_RS16510 PF00145 C-5 cytosine-specific DNA methylase APS40_RS16555 PF00701 Dihydrodipicolinate synthetase family APS40_RS16560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APS40_RS16570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS16575 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16580 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16580 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS16585 PF00465 Iron-containing alcohol dehydrogenase APS40_RS16590 PF00392 Bacterial regulatory proteins, gntR family APS40_RS16590 PF07729 FCD domain APS40_RS16600 PF00005 ABC transporter APS40_RS16600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS16605 PF01545 Cation efflux family APS40_RS16610 PF17991 Thioredoxin like C-terminal domain APS40_RS16610 PF02683 Cytochrome C biogenesis protein transmembrane region APS40_RS16610 PF00578 AhpC/TSA family APS40_RS16620 PF00581 Rhodanese-like domain APS40_RS16640 PF03702 Anhydro-N-acetylmuramic acid kinase APS40_RS16650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS16650 PF00005 ABC transporter APS40_RS16655 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS16670 PF13580 SIS domain APS40_RS16675 PF01380 SIS domain APS40_RS16675 PF01418 Helix-turn-helix domain, rpiR family APS40_RS16680 PF00933 Glycosyl hydrolase family 3 N terminal domain APS40_RS16685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS16690 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16695 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS16695 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16700 PF00005 ABC transporter APS40_RS16700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS16705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS16705 PF00005 ABC transporter APS40_RS16710 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain APS40_RS16710 PF00877 NlpC/P60 family APS40_RS16715 PF00005 ABC transporter APS40_RS16715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS16720 PF00005 ABC transporter APS40_RS16720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS16725 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16725 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS16730 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS16750 PF16363 GDP-mannose 4,6 dehydratase APS40_RS16755 PF00480 ROK family APS40_RS16760 PF01547 Bacterial extracellular solute-binding protein APS40_RS16765 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16770 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS16775 PF00005 ABC transporter APS40_RS16775 PF17912 MalK OB fold domain APS40_RS16795 PF00953 Glycosyl transferase family 4 APS40_RS16805 PF14403 Circularly permuted ATP-grasp type 2 APS40_RS16820 PF03547 Membrane transport protein APS40_RS16825 PF08220 DeoR-like helix-turn-helix domain APS40_RS16825 PF00455 DeoR C terminal sensor domain APS40_RS16830 PF01266 FAD dependent oxidoreductase APS40_RS16830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase APS40_RS16835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS40_RS16835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS40_RS16840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS40_RS16840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS40_RS16850 PF00128 Alpha amylase, catalytic domain APS40_RS16865 PF07687 Peptidase dimerisation domain APS40_RS16865 PF01546 Peptidase family M20/M25/M40 APS40_RS16870 PF01012 Electron transfer flavoprotein domain APS40_RS16875 PF00766 Electron transfer flavoprotein FAD-binding domain APS40_RS16875 PF01012 Electron transfer flavoprotein domain APS40_RS16880 PF00155 Aminotransferase class I and II APS40_RS16885 PF00923 Transaldolase/Fructose-6-phosphate aldolase APS40_RS16890 PF10609 NUBPL iron-transfer P-loop NTPase APS40_RS16890 PF01883 Iron-sulfur cluster assembly protein APS40_RS16900 PF00232 Glycosyl hydrolase family 1 APS40_RS16915 PF01925 Sulfite exporter TauE/SafE APS40_RS16920 PF01634 ATP phosphoribosyltransferase APS40_RS16925 PF13393 Histidyl-tRNA synthetase APS40_RS16930 PF03129 Anticodon binding domain APS40_RS16930 PF13393 Histidyl-tRNA synthetase APS40_RS16945 PF03352 Methyladenine glycosylase APS40_RS16950 PF00072 Response regulator receiver domain APS40_RS16960 PF17969 L,D-transpeptidase C-terminal domain APS40_RS16960 PF01476 LysM domain APS40_RS16960 PF03734 L,D-transpeptidase catalytic domain APS40_RS16990 PF13416 Bacterial extracellular solute-binding protein APS40_RS16995 PF13416 Bacterial extracellular solute-binding protein APS40_RS17000 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17005 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17015 PF00128 Alpha amylase, catalytic domain APS40_RS17020 PF00118 TCP-1/cpn60 chaperonin family APS40_RS17025 PF00166 Chaperonin 10 Kd subunit APS40_RS17030 PF00535 Glycosyl transferase family 2 APS40_RS17040 PF00158 Sigma-54 interaction domain APS40_RS17040 PF02954 Bacterial regulatory protein, Fis family APS40_RS17040 PF00072 Response regulator receiver domain APS40_RS17055 PF06574 FAD synthetase APS40_RS17055 PF01687 Riboflavin kinase APS40_RS17060 PF00133 tRNA synthetases class I (I, L, M and V) APS40_RS17060 PF08264 Anticodon-binding domain of tRNA APS40_RS17065 PF01252 Signal peptidase (SPase) II APS40_RS17075 PF00849 RNA pseudouridylate synthase APS40_RS17075 PF01479 S4 domain APS40_RS17090 PF01119 DNA mismatch repair protein, C-terminal domain APS40_RS17090 PF08676 MutL C terminal dimerisation domain APS40_RS17095 PF14437 MafB19-like deaminase APS40_RS17105 PF01734 Patatin-like phospholipase APS40_RS17110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APS40_RS17110 PF02844 Phosphoribosylglycinamide synthetase, N domain APS40_RS17110 PF02843 Phosphoribosylglycinamide synthetase, C domain APS40_RS17115 PF02601 Exonuclease VII, large subunit APS40_RS17115 PF13742 OB-fold nucleic acid binding domain APS40_RS17135 PF00793 DAHP synthetase I family APS40_RS17145 PF02348 Cytidylyltransferase APS40_RS17150 PF00571 CBS domain APS40_RS17150 PF01380 SIS domain APS40_RS17155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APS40_RS17165 PF00459 Inositol monophosphatase family APS40_RS17175 PF01040 UbiA prenyltransferase family APS40_RS17180 PF04452 RNA methyltransferase APS40_RS17185 PF04107 Glutamate-cysteine ligase family 2(GCS2) APS40_RS17205 PF13732 Domain of unknown function (DUF4162) APS40_RS17205 PF00005 ABC transporter APS40_RS17210 PF01047 MarR family APS40_RS17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS17215 PF03466 LysR substrate binding domain APS40_RS17235 PF02790 Cytochrome C oxidase subunit II, transmembrane domain APS40_RS17235 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APS40_RS17240 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS40_RS17245 PF01040 UbiA prenyltransferase family APS40_RS17250 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 APS40_RS17255 PF00510 Cytochrome c oxidase subunit III APS40_RS17270 PF02104 SURF1 family APS40_RS17275 PF14821 Threonine synthase N terminus APS40_RS17275 PF00291 Pyridoxal-phosphate dependent enzyme APS40_RS17280 PF05193 Peptidase M16 inactive domain APS40_RS17280 PF00675 Insulinase (Peptidase family M16) APS40_RS17290 PF00563 EAL domain APS40_RS17290 PF03707 Bacterial signalling protein N terminal repeat APS40_RS17290 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS17295 PF02622 Uncharacterized ACR, COG1678 APS40_RS17305 PF00462 Glutaredoxin APS40_RS17305 PF08534 Redoxin APS40_RS17315 PF08669 Glycine cleavage T-protein C-terminal barrel domain APS40_RS17315 PF01571 Aminomethyltransferase folate-binding domain APS40_RS17320 PF01597 Glycine cleavage H-protein APS40_RS17325 PF02347 Glycine cleavage system P-protein APS40_RS17330 PF00266 Aminotransferase class-V APS40_RS17345 PF00430 ATP synthase B/B' CF(0) APS40_RS17350 PF00430 ATP synthase B/B' CF(0) APS40_RS17355 PF00137 ATP synthase subunit C APS40_RS17360 PF00119 ATP synthase A chain APS40_RS17365 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter APS40_RS17370 PF02463 RecF/RecN/SMC N terminal domain APS40_RS17375 PF13462 Thioredoxin APS40_RS17385 PF00730 HhH-GPD superfamily base excision DNA repair protein APS40_RS17385 PF14815 NUDIX domain APS40_RS17390 PF01555 DNA methylase APS40_RS17390 PF18755 Restriction Enzyme Adenine Methylase Associated APS40_RS17395 PF01351 Ribonuclease HII APS40_RS17410 PF02092 Glycyl-tRNA synthetase beta subunit APS40_RS17410 PF05746 DALR anticodon binding domain APS40_RS17420 PF04011 LemA family APS40_RS17430 PF00994 Probable molybdopterin binding domain APS40_RS17435 PF13505 Outer membrane protein beta-barrel domain APS40_RS17445 PF01156 Inosine-uridine preferring nucleoside hydrolase APS40_RS17450 PF03167 Uracil DNA glycosylase superfamily APS40_RS17465 PF00288 GHMP kinases N terminal domain APS40_RS17465 PF08544 GHMP kinases C terminal APS40_RS17470 PF13505 Outer membrane protein beta-barrel domain APS40_RS17475 PF00348 Polyprenyl synthetase APS40_RS17485 PF01343 Peptidase family S49 APS40_RS17485 PF06965 Na+/H+ antiporter 1 APS40_RS17495 PF06772 Bacterial low temperature requirement A protein (LtrA) APS40_RS17500 PF02091 Glycyl-tRNA synthetase alpha subunit APS40_RS17515 PF00075 RNase H APS40_RS17525 PF02401 LytB protein APS40_RS17530 PF02896 PEP-utilising enzyme, TIM barrel domain APS40_RS17530 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain APS40_RS17530 PF00391 PEP-utilising enzyme, mobile domain APS40_RS17535 PF07486 Cell Wall Hydrolase APS40_RS17535 PF01471 Putative peptidoglycan binding domain APS40_RS17540 PF02525 Flavodoxin-like fold APS40_RS17550 PF07969 Amidohydrolase family APS40_RS17555 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17560 PF00005 ABC transporter APS40_RS17575 PF02633 Creatinine amidohydrolase APS40_RS17580 PF00221 Aromatic amino acid lyase APS40_RS17585 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APS40_RS17590 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17595 PF00005 ABC transporter APS40_RS17600 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17605 PF01979 Amidohydrolase family APS40_RS17615 PF01546 Peptidase family M20/M25/M40 APS40_RS17625 PF01175 Urocanase Rossmann-like domain APS40_RS17625 PF17391 Urocanase N-terminal domain APS40_RS17625 PF17392 Urocanase C-terminal domain APS40_RS17630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS17635 PF00005 ABC transporter APS40_RS17635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS17640 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17640 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS17645 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17655 PF01370 NAD dependent epimerase/dehydratase family APS40_RS17690 PF05872 Bacterial protein of unknown function (DUF853) APS40_RS17700 PF01638 HxlR-like helix-turn-helix APS40_RS17705 PF00107 Zinc-binding dehydrogenase APS40_RS17705 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS17715 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APS40_RS17715 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APS40_RS17720 PF00326 Prolyl oligopeptidase family APS40_RS17720 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain APS40_RS17725 PF01641 SelR domain APS40_RS17730 PF13244 Domain of unknown function (DUF4040) APS40_RS17730 PF00361 Proton-conducting membrane transporter APS40_RS17730 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APS40_RS17735 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter APS40_RS17740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APS40_RS17745 PF00361 Proton-conducting membrane transporter APS40_RS17750 PF01899 Na+/H+ ion antiporter subunit APS40_RS17755 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) APS40_RS17760 PF03334 Na+/H+ antiporter subunit APS40_RS17765 PF05443 ROS/MUCR transcriptional regulator protein APS40_RS17770 PF04055 Radical SAM superfamily APS40_RS17775 PF01202 Shikimate kinase APS40_RS17780 PF00953 Glycosyl transferase family 4 APS40_RS17790 PF02657 Fe-S metabolism associated domain APS40_RS17800 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS17800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS17805 PF01510 N-acetylmuramoyl-L-alanine amidase APS40_RS17805 PF01471 Putative peptidoglycan binding domain APS40_RS17835 PF14814 Bifunctional transglycosylase second domain APS40_RS17835 PF00912 Transglycosylase APS40_RS17835 PF00905 Penicillin binding protein transpeptidase domain APS40_RS17840 PF03692 Putative zinc- or iron-chelating domain APS40_RS17850 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS40_RS17850 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 APS40_RS17850 PF00703 Glycosyl hydrolases family 2 APS40_RS17850 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APS40_RS17850 PF16355 Domain of unknown function (DUF4982) APS40_RS17865 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17870 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17875 PF00356 Bacterial regulatory proteins, lacI family APS40_RS17880 PF01546 Peptidase family M20/M25/M40 APS40_RS17880 PF07687 Peptidase dimerisation domain APS40_RS17910 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17915 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17925 PF07729 FCD domain APS40_RS17925 PF00392 Bacterial regulatory proteins, gntR family APS40_RS17935 PF12951 Passenger-associated-transport-repeat APS40_RS17940 PF12951 Passenger-associated-transport-repeat APS40_RS17950 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17955 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS17960 PF01547 Bacterial extracellular solute-binding protein APS40_RS17965 PF13580 SIS domain APS40_RS17970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS17970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS17975 PF00392 Bacterial regulatory proteins, gntR family APS40_RS17990 PF07690 Major Facilitator Superfamily APS40_RS17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS17995 PF03466 LysR substrate binding domain APS40_RS18025 PF00072 Response regulator receiver domain APS40_RS18025 PF00486 Transcriptional regulatory protein, C terminal APS40_RS18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS18045 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS18045 PF04324 BFD-like [2Fe-2S] binding domain APS40_RS18060 PF03100 CcmE APS40_RS18065 PF01578 Cytochrome C assembly protein APS40_RS18065 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal APS40_RS18070 PF03918 Cytochrome C biogenesis protein APS40_RS18080 PF13180 PDZ domain APS40_RS18085 PF00072 Response regulator receiver domain APS40_RS18085 PF00486 Transcriptional regulatory protein, C terminal APS40_RS18090 PF00672 HAMP domain APS40_RS18090 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS18100 PF08335 GlnD PII-uridylyltransferase APS40_RS18100 PF03710 Glutamate-ammonia ligase adenylyltransferase APS40_RS18110 PF13280 WYL domain APS40_RS18110 PF08279 HTH domain APS40_RS18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS18125 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS18125 PF00989 PAS fold APS40_RS18130 PF01433 Peptidase family M1 domain APS40_RS18130 PF17432 Domain of unknown function (DUF3458_C) ARM repeats APS40_RS18130 PF11940 Domain of unknown function (DUF3458) Ig-like fold APS40_RS18135 PF00005 ABC transporter APS40_RS18135 PF00664 ABC transporter transmembrane region APS40_RS18140 PF00664 ABC transporter transmembrane region APS40_RS18140 PF00005 ABC transporter APS40_RS18145 PF00664 ABC transporter transmembrane region APS40_RS18145 PF00005 ABC transporter APS40_RS18185 PF01638 HxlR-like helix-turn-helix APS40_RS18195 PF00892 EamA-like transporter family APS40_RS18200 PF00892 EamA-like transporter family APS40_RS18220 PF00950 ABC 3 transport family APS40_RS18225 PF00950 ABC 3 transport family APS40_RS18230 PF00005 ABC transporter APS40_RS18235 PF01297 Zinc-uptake complex component A periplasmic APS40_RS18240 PF01566 Natural resistance-associated macrophage protein APS40_RS18250 PF00313 'Cold-shock' DNA-binding domain APS40_RS18255 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS18260 PF01638 HxlR-like helix-turn-helix APS40_RS18265 PF07690 Major Facilitator Superfamily APS40_RS18270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS40_RS18270 PF00529 HlyD membrane-fusion protein of T1SS APS40_RS18275 PF01047 MarR family APS40_RS18280 PF01207 Dihydrouridine synthase (Dus) APS40_RS18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS18300 PF03466 LysR substrate binding domain APS40_RS18305 PF02798 Glutathione S-transferase, N-terminal domain APS40_RS18305 PF00043 Glutathione S-transferase, C-terminal domain APS40_RS18310 PF02654 Cobalamin-5-phosphate synthase APS40_RS18315 PF02277 Phosphoribosyltransferase APS40_RS18325 PF00202 Aminotransferase class-III APS40_RS18330 PF00989 PAS fold APS40_RS18330 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS18330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS18340 PF01037 Lrp/AsnC ligand binding domain APS40_RS18340 PF13404 AsnC-type helix-turn-helix domain APS40_RS18345 PF01738 Dienelactone hydrolase family APS40_RS18355 PF05199 GMC oxidoreductase APS40_RS18355 PF00732 GMC oxidoreductase APS40_RS18365 PF06463 Molybdenum Cofactor Synthesis C APS40_RS18365 PF04055 Radical SAM superfamily APS40_RS18370 PF03734 L,D-transpeptidase catalytic domain APS40_RS18370 PF17969 L,D-transpeptidase C-terminal domain APS40_RS18375 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APS40_RS18385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS40_RS18385 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS18390 PF01474 Class-II DAHP synthetase family APS40_RS18410 PF02540 NAD synthase APS40_RS18410 PF00795 Carbon-nitrogen hydrolase APS40_RS18415 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS40_RS18430 PF01406 tRNA synthetases class I (C) catalytic domain APS40_RS18455 PF00561 alpha/beta hydrolase fold APS40_RS18465 PF08502 LeuA allosteric (dimerisation) domain APS40_RS18465 PF00682 HMGL-like APS40_RS18470 PF01476 LysM domain APS40_RS18480 PF00005 ABC transporter APS40_RS18480 PF00664 ABC transporter transmembrane region APS40_RS18485 PF01168 Alanine racemase, N-terminal domain APS40_RS18485 PF00842 Alanine racemase, C-terminal domain APS40_RS18485 PF01757 Acyltransferase family APS40_RS18490 PF00873 AcrB/AcrD/AcrF family APS40_RS18505 PF00459 Inositol monophosphatase family APS40_RS18510 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain APS40_RS18510 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain APS40_RS18515 PF01389 OmpA-like transmembrane domain APS40_RS18515 PF00691 OmpA family APS40_RS18520 PF09856 Predicted transcriptional regulator (DUF2083) APS40_RS18520 PF06114 IrrE N-terminal-like domain APS40_RS18520 PF01381 Helix-turn-helix APS40_RS18525 PF01039 Carboxyl transferase domain APS40_RS18530 PF04480 Protein of unknown function (DUF559) APS40_RS18535 PF02785 Biotin carboxylase C-terminal domain APS40_RS18535 PF00289 Biotin carboxylase, N-terminal domain APS40_RS18535 PF18140 Propionyl-coenzyme A carboxylase BT domain APS40_RS18535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS40_RS18535 PF00364 Biotin-requiring enzyme APS40_RS18540 PF02310 B12 binding domain APS40_RS18540 PF01642 Methylmalonyl-CoA mutase APS40_RS18550 PF01061 ABC-2 type transporter APS40_RS18555 PF00005 ABC transporter APS40_RS18570 PF08241 Methyltransferase domain APS40_RS18575 PF14307 Glycosyltransferase WbsX APS40_RS18575 PF05045 Rhamnan synthesis protein F APS40_RS18580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase APS40_RS18585 PF00483 Nucleotidyl transferase APS40_RS18590 PF04321 RmlD substrate binding domain APS40_RS18595 PF16363 GDP-mannose 4,6 dehydratase APS40_RS18605 PF05025 RbsD / FucU transport protein family APS40_RS18615 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS18620 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS18625 PF01381 Helix-turn-helix APS40_RS18630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS40_RS18630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS40_RS18635 PF05343 M42 glutamyl aminopeptidase APS40_RS18640 PF03437 BtpA family APS40_RS18650 PF01979 Amidohydrolase family APS40_RS18655 PF13580 SIS domain APS40_RS18660 PF00392 Bacterial regulatory proteins, gntR family APS40_RS18660 PF07702 UTRA domain APS40_RS18670 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS18675 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS18680 PF01547 Bacterial extracellular solute-binding protein APS40_RS18715 PF02541 Ppx/GppA phosphatase family APS40_RS18720 PF01728 FtsJ-like methyltransferase APS40_RS18725 PF07690 Major Facilitator Superfamily APS40_RS18730 PF07690 Major Facilitator Superfamily APS40_RS18740 PF00009 Elongation factor Tu GTP binding domain APS40_RS18740 PF14492 Elongation Factor G, domain II APS40_RS18740 PF00679 Elongation factor G C-terminus APS40_RS18740 PF03764 Elongation factor G, domain IV APS40_RS18745 PF00478 IMP dehydrogenase / GMP reductase domain APS40_RS18745 PF00571 CBS domain APS40_RS18755 PF01189 16S rRNA methyltransferase RsmB/F APS40_RS18755 PF01029 NusB family APS40_RS18765 PF03073 TspO/MBR family APS40_RS18785 PF00117 Glutamine amidotransferase class-I APS40_RS18785 PF00958 GMP synthase C terminal domain APS40_RS18805 PF03734 L,D-transpeptidase catalytic domain APS40_RS18815 PF01926 50S ribosome-binding GTPase APS40_RS18815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APS40_RS18820 PF00248 Aldo/keto reductase family APS40_RS18825 PF06719 AraC-type transcriptional regulator N-terminus APS40_RS18825 PF12833 Helix-turn-helix domain APS40_RS18830 PF03471 Transporter associated domain APS40_RS18830 PF01595 Cyclin M transmembrane N-terminal domain APS40_RS18830 PF00571 CBS domain APS40_RS18835 PF00106 short chain dehydrogenase APS40_RS18840 PF00156 Phosphoribosyl transferase domain APS40_RS18840 PF13537 Glutamine amidotransferase domain APS40_RS18850 PF18073 Rubredoxin metal binding domain APS40_RS18850 PF06745 KaiC APS40_RS18860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS18860 PF13378 Enolase C-terminal domain-like APS40_RS18885 PF00072 Response regulator receiver domain APS40_RS18885 PF00486 Transcriptional regulatory protein, C terminal APS40_RS18895 PF10431 C-terminal, D2-small domain, of ClpB protein APS40_RS18895 PF06689 ClpX C4-type zinc finger APS40_RS18895 PF07724 AAA domain (Cdc48 subfamily) APS40_RS18900 PF01168 Alanine racemase, N-terminal domain APS40_RS18900 PF00842 Alanine racemase, C-terminal domain APS40_RS18905 PF03796 DnaB-like helicase C terminal domain APS40_RS18905 PF00772 DnaB-like helicase N terminal domain APS40_RS18930 PF03948 Ribosomal protein L9, C-terminal domain APS40_RS18930 PF01281 Ribosomal protein L9, N-terminal domain APS40_RS18935 PF01084 Ribosomal protein S18 APS40_RS18940 PF01250 Ribosomal protein S6 APS40_RS18955 PF00291 Pyridoxal-phosphate dependent enzyme APS40_RS18955 PF13291 ACT domain APS40_RS18960 PF00698 Acyl transferase domain APS40_RS18975 PF00550 Phosphopantetheine attachment site APS40_RS18980 PF00109 Beta-ketoacyl synthase, N-terminal domain APS40_RS18980 PF02801 Beta-ketoacyl synthase, C-terminal domain APS40_RS18985 PF02618 YceG-like family APS40_RS18990 PF08340 Domain of unknown function (DUF1732) APS40_RS18990 PF03755 YicC-like family, N-terminal region APS40_RS18995 PF00625 Guanylate kinase APS40_RS19010 PF00398 Ribosomal RNA adenine dimethylase APS40_RS19020 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APS40_RS19025 PF00639 PPIC-type PPIASE domain APS40_RS19025 PF09312 SurA N-terminal domain APS40_RS19045 PF02789 Cytosol aminopeptidase family, N-terminal domain APS40_RS19045 PF00883 Cytosol aminopeptidase family, catalytic domain APS40_RS19065 PF12848 ABC transporter APS40_RS19065 PF00005 ABC transporter APS40_RS19080 PF00334 Nucleoside diphosphate kinase APS40_RS19085 PF00270 DEAD/DEAH box helicase APS40_RS19085 PF00271 Helicase conserved C-terminal domain APS40_RS19090 PF01361 Tautomerase enzyme APS40_RS19095 PF01361 Tautomerase enzyme APS40_RS19100 PF04960 Glutaminase APS40_RS19110 PF07885 Ion channel APS40_RS19125 PF00893 Small Multidrug Resistance protein APS40_RS19145 PF00072 Response regulator receiver domain APS40_RS19145 PF00486 Transcriptional regulatory protein, C terminal APS40_RS19150 PF00672 HAMP domain APS40_RS19150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS19150 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS19155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS40_RS19155 PF01568 Molydopterin dinucleotide binding domain APS40_RS19155 PF00384 Molybdopterin oxidoreductase APS40_RS19160 PF01925 Sulfite exporter TauE/SafE APS40_RS19170 PF02798 Glutathione S-transferase, N-terminal domain APS40_RS19170 PF00043 Glutathione S-transferase, C-terminal domain APS40_RS19185 PF13460 NAD(P)H-binding APS40_RS19195 PF00483 Nucleotidyl transferase APS40_RS19195 PF01050 Mannose-6-phosphate isomerase APS40_RS19200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS40_RS19200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APS40_RS19200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS40_RS19205 PF03358 NADPH-dependent FMN reductase APS40_RS19210 PF02082 Transcriptional regulator APS40_RS19220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS19220 PF00005 ABC transporter APS40_RS19225 PF00005 ABC transporter APS40_RS19225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS19230 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS19230 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS19235 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS19240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS19260 PF02397 Bacterial sugar transferase APS40_RS19275 PF00149 Calcineurin-like phosphoesterase APS40_RS19280 PF13614 AAA domain APS40_RS19280 PF02706 Chain length determinant protein APS40_RS19280 PF13807 G-rich domain on putative tyrosine kinase APS40_RS19290 PF00534 Glycosyl transferases group 1 APS40_RS19305 PF17103 Stealth protein CR4, conserved region 4 APS40_RS19305 PF17102 Stealth protein CR3, conserved region 3 APS40_RS19305 PF17101 Stealth protein CR1, conserved region 1 APS40_RS19305 PF11380 Stealth protein CR2, conserved region 2 APS40_RS19305 PF00534 Glycosyl transferases group 1 APS40_RS19310 PF03808 Glycosyl transferase WecB/TagA/CpsF family APS40_RS19325 PF16363 GDP-mannose 4,6 dehydratase APS40_RS19330 PF16363 GDP-mannose 4,6 dehydratase APS40_RS19335 PF00459 Inositol monophosphatase family APS40_RS19345 PF08402 TOBE domain APS40_RS19345 PF00005 ABC transporter APS40_RS19350 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS19365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS19370 PF01261 Xylose isomerase-like TIM barrel APS40_RS19380 PF08402 TOBE domain APS40_RS19380 PF00005 ABC transporter APS40_RS19385 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS19390 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS19400 PF00356 Bacterial regulatory proteins, lacI family APS40_RS19420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS19425 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS19430 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS19430 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS19435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS19435 PF00005 ABC transporter APS40_RS19440 PF11975 Family 4 glycosyl hydrolase C-terminal domain APS40_RS19440 PF02056 Family 4 glycosyl hydrolase APS40_RS19445 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase APS40_RS19450 PF00571 CBS domain APS40_RS19455 PF00892 EamA-like transporter family APS40_RS19475 PF04820 Tryptophan halogenase APS40_RS19500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS19500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS19505 PF00392 Bacterial regulatory proteins, gntR family APS40_RS19505 PF07702 UTRA domain APS40_RS19510 PF01380 SIS domain APS40_RS19515 PF01979 Amidohydrolase family APS40_RS19545 PF00829 Ribosomal prokaryotic L21 protein APS40_RS19555 PF01464 Transglycosylase SLT domain APS40_RS19555 PF14718 Soluble lytic murein transglycosylase L domain APS40_RS19560 PF00701 Dihydrodipicolinate synthetase family APS40_RS19565 PF01668 SmpB protein APS40_RS19570 PF01738 Dienelactone hydrolase family APS40_RS19575 PF03167 Uracil DNA glycosylase superfamily APS40_RS19585 PF01192 RNA polymerase Rpb6 APS40_RS19590 PF13291 ACT domain APS40_RS19590 PF02824 TGS domain APS40_RS19590 PF04607 Region found in RelA / SpoT proteins APS40_RS19595 PF00156 Phosphoribosyl transferase domain APS40_RS19600 PF01648 4'-phosphopantetheinyl transferase superfamily APS40_RS19605 PF10502 Signal peptidase, peptidase S26 APS40_RS19610 PF14622 Ribonuclease-III-like APS40_RS19610 PF00035 Double-stranded RNA binding motif APS40_RS19615 PF07650 KH domain APS40_RS19615 PF01926 50S ribosome-binding GTPase APS40_RS19620 PF02565 Recombination protein O C terminal APS40_RS19620 PF11967 Recombination protein O N terminal APS40_RS19650 PF00490 Delta-aminolevulinic acid dehydratase APS40_RS19660 PF04376 Arginine-tRNA-protein transferase, N terminus APS40_RS19660 PF04377 Arginine-tRNA-protein transferase, C terminus APS40_RS19675 PF00521 DNA gyrase/topoisomerase IV, subunit A APS40_RS19675 PF03989 DNA gyrase C-terminal domain, beta-propeller APS40_RS19680 PF00300 Histidine phosphatase superfamily (branch 1) APS40_RS19690 PF00464 Serine hydroxymethyltransferase APS40_RS19695 PF03477 ATP cone domain APS40_RS19700 PF01029 NusB family APS40_RS19705 PF07690 Major Facilitator Superfamily APS40_RS19725 PF02504 Fatty acid synthesis protein APS40_RS19730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APS40_RS19730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS40_RS19735 PF00216 Bacterial DNA-binding protein APS40_RS19740 PF13411 MerR HTH family regulatory protein APS40_RS19755 PF07690 Major Facilitator Superfamily APS40_RS19765 PF04073 Aminoacyl-tRNA editing domain APS40_RS19775 PF03793 PASTA domain APS40_RS19775 PF00905 Penicillin binding protein transpeptidase domain APS40_RS19775 PF03717 Penicillin-binding Protein dimerisation domain APS40_RS19805 PF13807 G-rich domain on putative tyrosine kinase APS40_RS19805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS40_RS19805 PF02706 Chain length determinant protein APS40_RS19815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS40_RS19825 PF02628 Cytochrome oxidase assembly protein APS40_RS19830 PF00572 Ribosomal protein L13 APS40_RS19835 PF00380 Ribosomal protein S9/S16 APS40_RS19845 PF00534 Glycosyl transferases group 1 APS40_RS19845 PF13439 Glycosyltransferase Family 4 APS40_RS19850 PF01022 Bacterial regulatory protein, arsR family APS40_RS19860 PF00155 Aminotransferase class I and II APS40_RS19865 PF01497 Periplasmic binding protein APS40_RS19870 PF03447 Homoserine dehydrogenase, NAD binding domain APS40_RS19870 PF01842 ACT domain APS40_RS19870 PF00742 Homoserine dehydrogenase APS40_RS19875 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded APS40_RS19890 PF02272 DHHA1 domain APS40_RS19890 PF01368 DHH family APS40_RS19890 PF17768 RecJ OB domain APS40_RS19900 PF01156 Inosine-uridine preferring nucleoside hydrolase APS40_RS19920 PF01032 FecCD transport family APS40_RS19925 PF01032 FecCD transport family APS40_RS19930 PF00005 ABC transporter APS40_RS19935 PF12697 Alpha/beta hydrolase family APS40_RS19950 PF01022 Bacterial regulatory protein, arsR family APS40_RS19965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS19965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS19970 PF00248 Aldo/keto reductase family APS40_RS19975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS19975 PF13378 Enolase C-terminal domain-like APS40_RS19980 PF00296 Luciferase-like monooxygenase APS40_RS19990 PF00005 ABC transporter APS40_RS19995 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS20025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS40_RS20030 PF00313 'Cold-shock' DNA-binding domain APS40_RS20040 PF03006 Haemolysin-III related APS40_RS20045 PF01022 Bacterial regulatory protein, arsR family APS40_RS20060 PF00005 ABC transporter APS40_RS20060 PF00664 ABC transporter transmembrane region APS40_RS20080 PF00356 Bacterial regulatory proteins, lacI family APS40_RS20085 PF01547 Bacterial extracellular solute-binding protein APS40_RS20090 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS20095 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS20100 PF17912 MalK OB fold domain APS40_RS20100 PF00005 ABC transporter APS40_RS20110 PF00535 Glycosyl transferase family 2 APS40_RS20130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS40_RS20130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS40_RS20155 PF01569 PAP2 superfamily APS40_RS20160 PF01053 Cys/Met metabolism PLP-dependent enzyme APS40_RS20165 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS40_RS20170 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS20175 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS20180 PF00005 ABC transporter APS40_RS20185 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS40_RS20190 PF02272 DHHA1 domain APS40_RS20190 PF01411 tRNA synthetases class II (A) APS40_RS20190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS40_RS20195 PF00291 Pyridoxal-phosphate dependent enzyme APS40_RS20195 PF00571 CBS domain APS40_RS20200 PF00875 DNA photolyase APS40_RS20200 PF03441 FAD binding domain of DNA photolyase APS40_RS20205 PF01507 Phosphoadenosine phosphosulfate reductase family APS40_RS20210 PF00009 Elongation factor Tu GTP binding domain APS40_RS20255 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX APS40_RS20260 PF03062 MBOAT, membrane-bound O-acyltransferase family APS40_RS20270 PF00483 Nucleotidyl transferase APS40_RS20270 PF01050 Mannose-6-phosphate isomerase APS40_RS20285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS40_RS20285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS40_RS20285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APS40_RS20295 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase APS40_RS20305 PF00535 Glycosyl transferase family 2 APS40_RS20310 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS40_RS20325 PF12804 MobA-like NTP transferase domain APS40_RS20330 PF13505 Outer membrane protein beta-barrel domain APS40_RS20350 PF00005 ABC transporter APS40_RS20350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS20355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS20355 PF00005 ABC transporter APS40_RS20360 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS20360 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS20365 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS20370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS20375 PF00196 Bacterial regulatory proteins, luxR family APS40_RS20375 PF03472 Autoinducer binding domain APS40_RS20410 PF02321 Outer membrane efflux protein APS40_RS20425 PF08264 Anticodon-binding domain of tRNA APS40_RS20425 PF00133 tRNA synthetases class I (I, L, M and V) APS40_RS20425 PF10458 Valyl tRNA synthetase tRNA binding arm APS40_RS20430 PF01544 CorA-like Mg2+ transporter protein APS40_RS20435 PF00920 Dehydratase family APS40_RS20450 PF03372 Endonuclease/Exonuclease/phosphatase family APS40_RS20455 PF00144 Beta-lactamase APS40_RS20460 PF00144 Beta-lactamase APS40_RS20465 PF01521 Iron-sulphur cluster biosynthesis APS40_RS20470 PF01966 HD domain APS40_RS20470 PF13286 Phosphohydrolase-associated domain APS40_RS20475 PF03485 Arginyl tRNA synthetase N terminal domain APS40_RS20475 PF05746 DALR anticodon binding domain APS40_RS20475 PF00750 tRNA synthetases class I (R) APS40_RS20485 PF02616 Segregation and condensation protein ScpA APS40_RS20490 PF04079 Segregation and condensation complex subunit ScpB APS40_RS20495 PF00005 ABC transporter APS40_RS20495 PF08402 TOBE domain APS40_RS20500 PF02416 mttA/Hcf106 family APS40_RS20505 PF02416 mttA/Hcf106 family APS40_RS20515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS40_RS20515 PF02403 Seryl-tRNA synthetase N-terminal domain APS40_RS20520 PF01975 Survival protein SurE APS40_RS20525 PF01551 Peptidase family M23 APS40_RS20525 PF01476 LysM domain APS40_RS20550 PF02699 Preprotein translocase subunit APS40_RS20555 PF02355 Protein export membrane protein APS40_RS20555 PF07549 SecD/SecF GG Motif APS40_RS20560 PF04430 Protein of unknown function (DUF498/DUF598) APS40_RS20575 PF01134 Glucose inhibited division protein A APS40_RS20585 PF13417 Glutathione S-transferase, N-terminal domain APS40_RS20585 PF00043 Glutathione S-transferase, C-terminal domain APS40_RS20590 PF01244 Membrane dipeptidase (Peptidase family M19) APS40_RS20600 PF17755 UvrA DNA-binding domain APS40_RS20600 PF17760 UvrA interaction domain APS40_RS20605 PF00436 Single-strand binding protein family APS40_RS20625 PF00563 EAL domain APS40_RS20625 PF01590 GAF domain APS40_RS20625 PF00360 Phytochrome region APS40_RS20625 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS20640 PF00521 DNA gyrase/topoisomerase IV, subunit A APS40_RS20640 PF03989 DNA gyrase C-terminal domain, beta-propeller APS40_RS20645 PF01810 LysE type translocator APS40_RS20650 PF01810 LysE type translocator APS40_RS20660 PF01467 Cytidylyltransferase-like APS40_RS20665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS40_RS20670 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS40_RS20680 PF02547 Queuosine biosynthesis protein APS40_RS20690 PF01702 Queuine tRNA-ribosyltransferase APS40_RS20695 PF00342 Phosphoglucose isomerase APS40_RS20705 PF00557 Metallopeptidase family M24 APS40_RS20715 PF00106 short chain dehydrogenase APS40_RS20745 PF00106 short chain dehydrogenase APS40_RS20755 PF13823 Alcohol dehydrogenase GroES-associated APS40_RS20755 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS20755 PF00107 Zinc-binding dehydrogenase APS40_RS20795 PF00296 Luciferase-like monooxygenase APS40_RS20800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS40_RS20800 PF00205 Thiamine pyrophosphate enzyme, central domain APS40_RS20800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS40_RS20815 PF00132 Bacterial transferase hexapeptide (six repeats) APS40_RS20815 PF12804 MobA-like NTP transferase domain APS40_RS20820 PF01380 SIS domain APS40_RS20835 PF00271 Helicase conserved C-terminal domain APS40_RS20835 PF00270 DEAD/DEAH box helicase APS40_RS20835 PF17191 RecG wedge domain APS40_RS20845 PF02559 CarD-like/TRCF domain APS40_RS20845 PF17757 UvrB interaction domain APS40_RS20845 PF00271 Helicase conserved C-terminal domain APS40_RS20845 PF03461 TRCF domain APS40_RS20845 PF00270 DEAD/DEAH box helicase APS40_RS20865 PF04143 Sulphur transport APS40_RS20870 PF03471 Transporter associated domain APS40_RS20870 PF03741 Integral membrane protein TerC family APS40_RS20875 PF08240 Alcohol dehydrogenase GroES-like domain APS40_RS20875 PF00107 Zinc-binding dehydrogenase APS40_RS20970 PF00589 Phage integrase family APS40_RS20970 PF13356 Arm DNA-binding domain APS40_RS20990 PF00561 alpha/beta hydrolase fold APS40_RS21000 PF02682 Carboxyltransferase domain, subdomain C and D APS40_RS21005 PF02626 Carboxyltransferase domain, subdomain A and B APS40_RS21010 PF03746 LamB/YcsF family APS40_RS21015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APS40_RS21015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APS40_RS21025 PF03448 MgtE intracellular N domain APS40_RS21025 PF01769 Divalent cation transporter APS40_RS21025 PF00571 CBS domain APS40_RS21030 PF14497 Glutathione S-transferase, C-terminal domain APS40_RS21030 PF02798 Glutathione S-transferase, N-terminal domain APS40_RS21045 PF13614 AAA domain APS40_RS21045 PF00376 MerR family regulatory protein APS40_RS21055 PF00768 D-alanyl-D-alanine carboxypeptidase APS40_RS21055 PF07943 Penicillin-binding protein 5, C-terminal domain APS40_RS21060 PF02617 ATP-dependent Clp protease adaptor protein ClpS APS40_RS21065 PF07724 AAA domain (Cdc48 subfamily) APS40_RS21065 PF02861 Clp amino terminal domain, pathogenicity island component APS40_RS21065 PF17871 AAA lid domain APS40_RS21065 PF10431 C-terminal, D2-small domain, of ClpB protein APS40_RS21065 PF00004 ATPase family associated with various cellular activities (AAA) APS40_RS21075 PF00916 Sulfate permease family APS40_RS21075 PF01740 STAS domain APS40_RS21090 PF01230 HIT domain APS40_RS21095 PF03033 Glycosyltransferase family 28 N-terminal domain APS40_RS21105 PF03009 Glycerophosphoryl diester phosphodiesterase family APS40_RS21115 PF11799 impB/mucB/samB family C-terminal domain APS40_RS21115 PF00817 impB/mucB/samB family APS40_RS21125 PF00072 Response regulator receiver domain APS40_RS21130 PF00072 Response regulator receiver domain APS40_RS21130 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS21135 PF00471 Ribosomal protein L33 APS40_RS21145 PF00575 S1 RNA binding domain APS40_RS21145 PF00773 RNB domain APS40_RS21145 PF08206 Ribonuclease B OB domain APS40_RS21145 PF17876 Cold shock domain APS40_RS21145 PF08461 Ribonuclease R winged-helix domain APS40_RS21150 PF01131 DNA topoisomerase APS40_RS21150 PF01396 Topoisomerase DNA binding C4 zinc finger APS40_RS21150 PF01751 Toprim domain APS40_RS21150 PF13368 Topoisomerase C-terminal repeat APS40_RS21155 PF17782 DprA winged helix domain APS40_RS21155 PF02481 DNA recombination-mediator protein A APS40_RS21160 PF02660 Glycerol-3-phosphate acyltransferase APS40_RS21165 PF01979 Amidohydrolase family APS40_RS21170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS40_RS21170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS40_RS21175 PF03652 Holliday junction resolvase APS40_RS21195 PF02686 Glu-tRNAGln amidotransferase C subunit APS40_RS21200 PF00583 Acetyltransferase (GNAT) family APS40_RS21205 PF01425 Amidase APS40_RS21215 PF09857 Putative toxin of bacterial toxin-antitoxin pair APS40_RS21230 PF02637 GatB domain APS40_RS21230 PF02934 GatB/GatE catalytic domain APS40_RS21235 PF07690 Major Facilitator Superfamily APS40_RS21265 PF01361 Tautomerase enzyme APS40_RS21275 PF00583 Acetyltransferase (GNAT) family APS40_RS21280 PF00551 Formyl transferase APS40_RS21290 PF00586 AIR synthase related protein, N-terminal domain APS40_RS21290 PF02769 AIR synthase related protein, C-terminal domain APS40_RS21295 PF01594 AI-2E family transporter APS40_RS21300 PF08299 Bacterial dnaA protein helix-turn-helix APS40_RS21300 PF11638 DnaA N-terminal domain APS40_RS21300 PF00308 Bacterial dnaA protein APS40_RS21305 PF13089 Polyphosphate kinase N-terminal domain APS40_RS21305 PF02503 Polyphosphate kinase middle domain APS40_RS21305 PF13090 Polyphosphate kinase C-terminal domain 2 APS40_RS21305 PF17941 Polyphosphate kinase C-terminal domain 1 APS40_RS21310 PF02541 Ppx/GppA phosphatase family APS40_RS21315 PF00570 HRDC domain APS40_RS21315 PF01612 3'-5' exonuclease APS40_RS21320 PF00152 tRNA synthetases class II (D, K and N) APS40_RS21320 PF01336 OB-fold nucleic acid binding domain APS40_RS21320 PF02938 GAD domain APS40_RS21325 PF00563 EAL domain APS40_RS21325 PF12792 CSS motif domain associated with EAL APS40_RS21330 PF01515 Phosphate acetyl/butaryl transferase APS40_RS21330 PF00390 Malic enzyme, N-terminal domain APS40_RS21330 PF03949 Malic enzyme, NAD binding domain APS40_RS21345 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus APS40_RS21345 PF01048 Phosphorylase superfamily APS40_RS21365 PF00174 Oxidoreductase molybdopterin binding domain APS40_RS21370 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) APS40_RS21375 PF06055 Exopolysaccharide synthesis, ExoD APS40_RS21380 PF07486 Cell Wall Hydrolase APS40_RS21415 PF01546 Peptidase family M20/M25/M40 APS40_RS21415 PF07687 Peptidase dimerisation domain APS40_RS21420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS21425 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS21430 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS21430 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS21435 PF00005 ABC transporter APS40_RS21435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS21440 PF00171 Aldehyde dehydrogenase family APS40_RS21450 PF00561 alpha/beta hydrolase fold APS40_RS21460 PF03576 Peptidase family S58 APS40_RS21485 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 APS40_RS21500 PF00266 Aminotransferase class-V APS40_RS21505 PF12911 N-terminal TM domain of oligopeptide transport permease C APS40_RS21505 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS21510 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS21515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS40_RS21515 PF00005 ABC transporter APS40_RS21520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS21525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS40_RS21535 PF01037 Lrp/AsnC ligand binding domain APS40_RS21540 PF01266 FAD dependent oxidoreductase APS40_RS21545 PF03741 Integral membrane protein TerC family APS40_RS21565 PF00296 Luciferase-like monooxygenase APS40_RS21570 PF00149 Calcineurin-like phosphoesterase APS40_RS21600 PF00293 NUDIX domain APS40_RS21605 PF13426 PAS domain APS40_RS21605 PF07536 HWE histidine kinase APS40_RS21605 PF13581 Histidine kinase-like ATPase domain APS40_RS21610 PF01339 CheB methylesterase APS40_RS21615 PF01739 CheR methyltransferase, SAM binding domain APS40_RS21615 PF03705 CheR methyltransferase, all-alpha domain APS40_RS21620 PF00072 Response regulator receiver domain APS40_RS21620 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS21620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS21620 PF01627 Hpt domain APS40_RS21640 PF00924 Mechanosensitive ion channel APS40_RS21645 PF00248 Aldo/keto reductase family APS40_RS21650 PF00303 Thymidylate synthase APS40_RS21675 PF02867 Ribonucleotide reductase, barrel domain APS40_RS21675 PF08471 Class II vitamin B12-dependent ribonucleotide reductase APS40_RS21700 PF12833 Helix-turn-helix domain APS40_RS21710 PF01022 Bacterial regulatory protein, arsR family APS40_RS21725 PF00106 short chain dehydrogenase APS40_RS21730 PF01636 Phosphotransferase enzyme family APS40_RS21735 PF03588 Leucyl/phenylalanyl-tRNA protein transferase APS40_RS21745 PF00289 Biotin carboxylase, N-terminal domain APS40_RS21745 PF02785 Biotin carboxylase C-terminal domain APS40_RS21745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS40_RS21750 PF00364 Biotin-requiring enzyme APS40_RS21755 PF01220 Dehydroquinase class II APS40_RS21765 PF00155 Aminotransferase class I and II APS40_RS21780 PF08279 HTH domain APS40_RS21780 PF13280 WYL domain APS40_RS21785 PF00575 S1 RNA binding domain APS40_RS21785 PF10150 Ribonuclease E/G family APS40_RS21785 PF12111 Polyribonucleotide phosphorylase C terminal APS40_RS21790 PF01520 N-acetylmuramoyl-L-alanine amidase APS40_RS21790 PF11741 AMIN domain APS40_RS21795 PF17092 Penicillin-binding protein OB-like domain APS40_RS21795 PF00912 Transglycosylase APS40_RS21795 PF00905 Penicillin binding protein transpeptidase domain APS40_RS21800 PF01327 Polypeptide deformylase APS40_RS21820 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS40_RS21820 PF00588 SpoU rRNA Methylase family APS40_RS21835 PF01547 Bacterial extracellular solute-binding protein APS40_RS21840 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS21845 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS21855 PF00356 Bacterial regulatory proteins, lacI family APS40_RS21865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS40_RS21865 PF13378 Enolase C-terminal domain-like APS40_RS21870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS40_RS21870 PF03466 LysR substrate binding domain APS40_RS21895 PF00158 Sigma-54 interaction domain APS40_RS21895 PF02954 Bacterial regulatory protein, Fis family APS40_RS21900 PF00584 SecE/Sec61-gamma subunits of protein translocation complex APS40_RS21905 PF00467 KOW motif APS40_RS21905 PF02357 Transcription termination factor nusG APS40_RS21910 PF03946 Ribosomal protein L11, N-terminal domain APS40_RS21910 PF00298 Ribosomal protein L11, RNA binding domain APS40_RS21915 PF00687 Ribosomal protein L1p/L10e family APS40_RS21920 PF00466 Ribosomal protein L10 APS40_RS21925 PF00542 Ribosomal protein L7/L12 C-terminal domain APS40_RS21925 PF16320 Ribosomal protein L7/L12 dimerisation domain APS40_RS21930 PF04563 RNA polymerase beta subunit APS40_RS21930 PF04561 RNA polymerase Rpb2, domain 2 APS40_RS21930 PF04565 RNA polymerase Rpb2, domain 3 APS40_RS21930 PF04560 RNA polymerase Rpb2, domain 7 APS40_RS21930 PF00562 RNA polymerase Rpb2, domain 6 APS40_RS21930 PF10385 RNA polymerase beta subunit external 1 domain APS40_RS21935 PF04998 RNA polymerase Rpb1, domain 5 APS40_RS21935 PF05000 RNA polymerase Rpb1, domain 4 APS40_RS21935 PF04983 RNA polymerase Rpb1, domain 3 APS40_RS21935 PF04997 RNA polymerase Rpb1, domain 1 APS40_RS21935 PF00623 RNA polymerase Rpb1, domain 2 APS40_RS21950 PF00164 Ribosomal protein S12/S23 APS40_RS21955 PF00177 Ribosomal protein S7p/S5e APS40_RS21960 PF03144 Elongation factor Tu domain 2 APS40_RS21960 PF00679 Elongation factor G C-terminus APS40_RS21960 PF14492 Elongation Factor G, domain II APS40_RS21960 PF00009 Elongation factor Tu GTP binding domain APS40_RS21960 PF03764 Elongation factor G, domain IV APS40_RS21965 PF03144 Elongation factor Tu domain 2 APS40_RS21965 PF00009 Elongation factor Tu GTP binding domain APS40_RS21965 PF03143 Elongation factor Tu C-terminal domain APS40_RS21970 PF00338 Ribosomal protein S10p/S20e APS40_RS21975 PF00297 Ribosomal protein L3 APS40_RS21980 PF00573 Ribosomal protein L4/L1 family APS40_RS21985 PF00276 Ribosomal protein L23 APS40_RS21990 PF00181 Ribosomal Proteins L2, RNA binding domain APS40_RS21990 PF03947 Ribosomal Proteins L2, C-terminal domain APS40_RS21995 PF00203 Ribosomal protein S19 APS40_RS22000 PF00237 Ribosomal protein L22p/L17e APS40_RS22005 PF00189 Ribosomal protein S3, C-terminal domain APS40_RS22005 PF07650 KH domain APS40_RS22010 PF00252 Ribosomal protein L16p/L10e APS40_RS22015 PF00831 Ribosomal L29 protein APS40_RS22020 PF00366 Ribosomal protein S17 APS40_RS22025 PF00238 Ribosomal protein L14p/L23e APS40_RS22030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APS40_RS22030 PF00467 KOW motif APS40_RS22035 PF00673 ribosomal L5P family C-terminus APS40_RS22035 PF00281 Ribosomal protein L5 APS40_RS22040 PF00253 Ribosomal protein S14p/S29e APS40_RS22045 PF00410 Ribosomal protein S8 APS40_RS22050 PF00347 Ribosomal protein L6 APS40_RS22055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APS40_RS22060 PF03719 Ribosomal protein S5, C-terminal domain APS40_RS22060 PF00333 Ribosomal protein S5, N-terminal domain APS40_RS22065 PF00327 Ribosomal protein L30p/L7e APS40_RS22070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APS40_RS22075 PF00344 SecY translocase APS40_RS22085 PF00416 Ribosomal protein S13/S18 APS40_RS22090 PF00411 Ribosomal protein S11 APS40_RS22095 PF01000 RNA polymerase Rpb3/RpoA insert domain APS40_RS22095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APS40_RS22095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APS40_RS22100 PF01196 Ribosomal protein L17 APS40_RS22105 PF07993 Male sterility protein APS40_RS22105 PF00501 AMP-binding enzyme APS40_RS22105 PF00550 Phosphopantetheine attachment site APS40_RS22110 PF01565 FAD binding domain APS40_RS22110 PF09330 D-lactate dehydrogenase, membrane binding APS40_RS22135 PF03952 Enolase, N-terminal domain APS40_RS22135 PF00113 Enolase, C-terminal TIM barrel domain APS40_RS22150 PF00676 Dehydrogenase E1 component APS40_RS22155 PF00364 Biotin-requiring enzyme APS40_RS22155 PF02779 Transketolase, pyrimidine binding domain APS40_RS22155 PF02780 Transketolase, C-terminal domain APS40_RS22160 PF14437 MafB19-like deaminase APS40_RS22165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS40_RS22165 PF02817 e3 binding domain APS40_RS22165 PF00364 Biotin-requiring enzyme APS40_RS22185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS40_RS22185 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS22200 PF04055 Radical SAM superfamily APS40_RS22220 PF00994 Probable molybdopterin binding domain APS40_RS22220 PF18146 Damage-inducible protein CinA KH domain APS40_RS22220 PF02464 Competence-damaged protein APS40_RS22225 PF02542 YgbB family APS40_RS22225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APS40_RS22230 PF01207 Dihydrouridine synthase (Dus) APS40_RS22235 PF00989 PAS fold APS40_RS22235 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS22235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS22240 PF02954 Bacterial regulatory protein, Fis family APS40_RS22240 PF00158 Sigma-54 interaction domain APS40_RS22240 PF00072 Response regulator receiver domain APS40_RS22245 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS22245 PF00989 PAS fold APS40_RS22245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS22245 PF00672 HAMP domain APS40_RS22250 PF00072 Response regulator receiver domain APS40_RS22250 PF02954 Bacterial regulatory protein, Fis family APS40_RS22250 PF00158 Sigma-54 interaction domain APS40_RS22255 PF17209 Hfq protein APS40_RS22260 PF13167 GTP-binding GTPase N-terminal APS40_RS22260 PF16360 GTP-binding GTPase Middle Region APS40_RS22260 PF01926 50S ribosome-binding GTPase APS40_RS22265 PF03819 MazG nucleotide pyrophosphohydrolase domain APS40_RS22275 PF01042 Endoribonuclease L-PSP APS40_RS22285 PF01026 TatD related DNase APS40_RS22290 PF09334 tRNA synthetases class I (M) APS40_RS22295 PF09115 DNA polymerase III, delta subunit, C terminal APS40_RS22300 PF02223 Thymidylate kinase APS40_RS22305 PF00768 D-alanyl-D-alanine carboxypeptidase APS40_RS22305 PF07943 Penicillin-binding protein 5, C-terminal domain APS40_RS22310 PF05036 Sporulation related domain APS40_RS22310 PF03330 Lytic transglycolase APS40_RS22320 PF02574 Homocysteine S-methyltransferase APS40_RS22320 PF02965 Vitamin B12 dependent methionine synthase, activation domain APS40_RS22320 PF00809 Pterin binding enzyme APS40_RS22320 PF02310 B12 binding domain APS40_RS22320 PF02607 B12 binding domain APS40_RS22340 PF09278 MerR, DNA binding APS40_RS22340 PF00376 MerR family regulatory protein APS40_RS22345 PF00403 Heavy-metal-associated domain APS40_RS22355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS40_RS22360 PF03099 Biotin/lipoate A/B protein ligase family APS40_RS22375 PF00919 Uncharacterized protein family UPF0004 APS40_RS22375 PF18693 TRAM domain APS40_RS22375 PF04055 Radical SAM superfamily APS40_RS22380 PF00809 Pterin binding enzyme APS40_RS22390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APS40_RS22400 PF13419 Haloacid dehalogenase-like hydrolase APS40_RS22405 PF13419 Haloacid dehalogenase-like hydrolase APS40_RS22415 PF01479 S4 domain APS40_RS22415 PF00849 RNA pseudouridylate synthase APS40_RS22420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APS40_RS22425 PF01145 SPFH domain / Band 7 family APS40_RS22425 PF15975 Flotillin APS40_RS22435 PF00004 ATPase family associated with various cellular activities (AAA) APS40_RS22435 PF16193 AAA C-terminal domain APS40_RS22435 PF12002 MgsA AAA+ ATPase C terminal APS40_RS22440 PF13180 PDZ domain APS40_RS22440 PF17820 PDZ domain APS40_RS22445 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APS40_RS22445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS40_RS22450 PF00255 Glutathione peroxidase APS40_RS22455 PF03472 Autoinducer binding domain APS40_RS22455 PF00196 Bacterial regulatory proteins, luxR family APS40_RS22480 PF06418 CTP synthase N-terminus APS40_RS22480 PF00117 Glutamine amidotransferase class-I APS40_RS22490 PF00121 Triosephosphate isomerase APS40_RS22500 PF04715 Anthranilate synthase component I, N terminal region APS40_RS22500 PF00425 chorismate binding enzyme APS40_RS22505 PF00117 Glutamine amidotransferase class-I APS40_RS22510 PF00591 Glycosyl transferase family, a/b domain APS40_RS22510 PF02885 Glycosyl transferase family, helical bundle domain APS40_RS22515 PF00218 Indole-3-glycerol phosphate synthase APS40_RS22520 PF01967 MoaC family APS40_RS22525 PF03453 MoeA N-terminal region (domain I and II) APS40_RS22525 PF00994 Probable molybdopterin binding domain APS40_RS22525 PF03454 MoeA C-terminal region (domain IV) APS40_RS22530 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS22535 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS22545 PF01970 Tripartite tricarboxylate transporter TctA family APS40_RS22565 PF00486 Transcriptional regulatory protein, C terminal APS40_RS22565 PF00072 Response regulator receiver domain APS40_RS22570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS22570 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS22580 PF07690 Major Facilitator Superfamily APS40_RS22585 PF00717 Peptidase S24-like APS40_RS22585 PF01726 LexA DNA binding domain APS40_RS22590 PF05035 2-keto-3-deoxy-galactonokinase APS40_RS22595 PF01081 KDPG and KHG aldolase APS40_RS22600 PF08450 SMP-30/Gluconolactonase/LRE-like region APS40_RS22605 PF02449 Beta-galactosidase APS40_RS22605 PF08533 Beta-galactosidase C-terminal domain APS40_RS22605 PF08532 Beta-galactosidase trimerisation domain APS40_RS22610 PF03772 Competence protein APS40_RS22610 PF00753 Metallo-beta-lactamase superfamily APS40_RS22615 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS40_RS22620 PF00285 Citrate synthase, C-terminal domain APS40_RS22625 PF02684 Lipid-A-disaccharide synthetase APS40_RS22635 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APS40_RS22635 PF00132 Bacterial transferase hexapeptide (six repeats) APS40_RS22640 PF07977 FabA-like domain APS40_RS22645 PF00132 Bacterial transferase hexapeptide (six repeats) APS40_RS22645 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APS40_RS22650 PF07244 Surface antigen variable number repeat APS40_RS22650 PF01103 Surface antigen APS40_RS22655 PF02163 Peptidase family M50 APS40_RS22655 PF17820 PDZ domain APS40_RS22665 PF01255 Putative undecaprenyl diphosphate synthase APS40_RS22670 PF01765 Ribosome recycling factor APS40_RS22675 PF00696 Amino acid kinase family APS40_RS22680 PF00889 Elongation factor TS APS40_RS22685 PF00318 Ribosomal protein S2 APS40_RS22690 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS40_RS22690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS40_RS22690 PF14579 Helix-hairpin-helix motif APS40_RS22690 PF02811 PHP domain APS40_RS22705 PF00005 ABC transporter APS40_RS22710 PF02687 FtsX-like permease family APS40_RS22710 PF12704 MacB-like periplasmic core domain APS40_RS22715 PF12704 MacB-like periplasmic core domain APS40_RS22715 PF02687 FtsX-like permease family APS40_RS22720 PF03129 Anticodon binding domain APS40_RS22720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS40_RS22735 PF17770 Ribonuclease J C-terminal domain APS40_RS22735 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain APS40_RS22735 PF12706 Beta-lactamase superfamily domain APS40_RS22740 PF02237 Biotin protein ligase C terminal domain APS40_RS22740 PF03099 Biotin/lipoate A/B protein ligase family APS40_RS22745 PF00361 Proton-conducting membrane transporter APS40_RS22750 PF00361 Proton-conducting membrane transporter APS40_RS22755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APS40_RS22755 PF00361 Proton-conducting membrane transporter APS40_RS22760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APS40_RS22765 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 APS40_RS22770 PF12838 4Fe-4S dicluster domain APS40_RS22775 PF00146 NADH dehydrogenase APS40_RS22780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APS40_RS22780 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal APS40_RS22780 PF00384 Molybdopterin oxidoreductase APS40_RS22785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APS40_RS22785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APS40_RS22785 PF10531 SLBB domain APS40_RS22795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APS40_RS22800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APS40_RS22805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APS40_RS22810 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 APS40_RS22825 PF08031 Berberine and berberine like APS40_RS22825 PF01565 FAD binding domain APS40_RS22835 PF00216 Bacterial DNA-binding protein APS40_RS22840 PF07690 Major Facilitator Superfamily APS40_RS22850 PF00004 ATPase family associated with various cellular activities (AAA) APS40_RS22850 PF05362 Lon protease (S16) C-terminal proteolytic domain APS40_RS22850 PF02190 ATP-dependent protease La (LON) substrate-binding domain APS40_RS22855 PF00285 Citrate synthase, C-terminal domain APS40_RS22860 PF00285 Citrate synthase, C-terminal domain APS40_RS22865 PF00291 Pyridoxal-phosphate dependent enzyme APS40_RS22875 PF01734 Patatin-like phospholipase APS40_RS22880 PF06689 ClpX C4-type zinc finger APS40_RS22880 PF07724 AAA domain (Cdc48 subfamily) APS40_RS22880 PF10431 C-terminal, D2-small domain, of ClpB protein APS40_RS22885 PF00574 Clp protease APS40_RS22915 PF03853 YjeF-related protein N-terminus APS40_RS22915 PF01256 Carbohydrate kinase APS40_RS22920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS40_RS22920 PF05698 Bacterial trigger factor protein (TF) C-terminus APS40_RS22920 PF05697 Bacterial trigger factor protein (TF) APS40_RS22935 PF00543 Nitrogen regulatory protein P-II APS40_RS22940 PF00120 Glutamine synthetase, catalytic domain APS40_RS22940 PF03951 Glutamine synthetase, beta-Grasp domain APS40_RS22950 PF05661 Protein of unknown function (DUF808) APS40_RS22955 PF13936 Helix-turn-helix domain APS40_RS22955 PF00665 Integrase core domain APS40_RS22960 PF06441 Epoxide hydrolase N terminus APS40_RS22975 PF01810 LysE type translocator APS40_RS22985 PF00005 ABC transporter APS40_RS22985 PF12848 ABC transporter APS40_RS23000 PF00986 DNA gyrase B subunit, carboxyl terminus APS40_RS23000 PF00204 DNA gyrase B APS40_RS23000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS23000 PF01751 Toprim domain APS40_RS23005 PF00270 DEAD/DEAH box helicase APS40_RS23005 PF00271 Helicase conserved C-terminal domain APS40_RS23010 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS23015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS40_RS23020 PF01521 Iron-sulphur cluster biosynthesis APS40_RS23025 PF01883 Iron-sulfur cluster assembly protein APS40_RS23030 PF00266 Aminotransferase class-V APS40_RS23035 PF01458 Uncharacterized protein family (UPF0051) APS40_RS23040 PF00005 ABC transporter APS40_RS23055 PF07883 Cupin domain APS40_RS23060 PF01458 Uncharacterized protein family (UPF0051) APS40_RS23065 PF00266 Aminotransferase class-V APS40_RS23070 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APS40_RS23075 PF01479 S4 domain APS40_RS23075 PF00579 tRNA synthetases class I (W and Y) APS40_RS23090 PF00578 AhpC/TSA family APS40_RS23095 PF08525 Opacity-associated protein A N-terminal motif APS40_RS23095 PF01551 Peptidase family M23 APS40_RS23095 PF01476 LysM domain APS40_RS23100 PF02780 Transketolase, C-terminal domain APS40_RS23100 PF02779 Transketolase, pyrimidine binding domain APS40_RS23110 PF00472 RF-1 domain APS40_RS23110 PF03462 PCRF domain APS40_RS23115 PF01513 ATP-NAD kinase APS40_RS23140 PF03795 YCII-related domain APS40_RS23145 PF03795 YCII-related domain APS40_RS23150 PF04542 Sigma-70 region 2 APS40_RS23150 PF08281 Sigma-70, region 4 APS40_RS23155 PF00211 Adenylate and Guanylate cyclase catalytic domain APS40_RS23170 PF07883 Cupin domain APS40_RS23175 PF03129 Anticodon binding domain APS40_RS23175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS40_RS23175 PF02824 TGS domain APS40_RS23175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS40_RS23185 PF01809 Putative membrane protein insertion efficiency factor APS40_RS23195 PF01227 GTP cyclohydrolase I APS40_RS23200 PF12833 Helix-turn-helix domain APS40_RS23205 PF01502 Phosphoribosyl-AMP cyclohydrolase APS40_RS23210 PF04102 SlyX APS40_RS23250 PF00132 Bacterial transferase hexapeptide (six repeats) APS40_RS23250 PF06426 Serine acetyltransferase, N-terminal APS40_RS23255 PF00561 alpha/beta hydrolase fold APS40_RS23265 PF01494 FAD binding domain APS40_RS23270 PF07690 Major Facilitator Superfamily APS40_RS23275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS40_RS23275 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APS40_RS23285 PF01202 Shikimate kinase APS40_RS23295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS40_RS23295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APS40_RS23320 PF05532 CsbD-like APS40_RS23325 PF13411 MerR HTH family regulatory protein APS40_RS23325 PF07739 TipAS antibiotic-recognition domain APS40_RS23350 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding APS40_RS23370 PF00156 Phosphoribosyl transferase domain APS40_RS23375 PF02464 Competence-damaged protein APS40_RS23375 PF00994 Probable molybdopterin binding domain APS40_RS23380 PF00557 Metallopeptidase family M24 APS40_RS23385 PF04002 RadC-like JAB domain APS40_RS23390 PF02683 Cytochrome C biogenesis protein transmembrane region APS40_RS23400 PF00834 Ribulose-phosphate 3 epimerase family APS40_RS23405 PF10397 Adenylosuccinate lyase C-terminus APS40_RS23405 PF00206 Lyase APS40_RS23430 PF01259 SAICAR synthetase APS40_RS23435 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase APS40_RS23465 PF01928 CYTH domain APS40_RS23470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APS40_RS23470 PF00586 AIR synthase related protein, N-terminal domain APS40_RS23470 PF02769 AIR synthase related protein, C-terminal domain APS40_RS23475 PF01625 Peptide methionine sulfoxide reductase APS40_RS23485 PF04480 Protein of unknown function (DUF559) APS40_RS23495 PF00462 Glutaredoxin APS40_RS23520 PF07690 Major Facilitator Superfamily APS40_RS23530 PF00459 Inositol monophosphatase family APS40_RS23535 PF01171 PP-loop family APS40_RS23540 PF05992 SbmA/BacA-like family APS40_RS23555 PF13193 AMP-binding enzyme C-terminal domain APS40_RS23555 PF00501 AMP-binding enzyme APS40_RS23560 PF00163 Ribosomal protein S4/S9 N-terminal domain APS40_RS23560 PF01479 S4 domain APS40_RS23565 PF07690 Major Facilitator Superfamily APS40_RS23570 PF00588 SpoU rRNA Methylase family APS40_RS23575 PF00990 Diguanylate cyclase, GGDEF domain APS40_RS23575 PF17151 Periplasmic sensor domain APS40_RS23585 PF13302 Acetyltransferase (GNAT) domain APS40_RS23605 PF00109 Beta-ketoacyl synthase, N-terminal domain APS40_RS23605 PF02801 Beta-ketoacyl synthase, C-terminal domain APS40_RS23610 PF01047 MarR family APS40_RS23615 PF00180 Isocitrate/isopropylmalate dehydrogenase APS40_RS23620 PF08437 Glycosyl transferase family 8 C-terminal APS40_RS23620 PF01501 Glycosyl transferase family 8 APS40_RS23640 PF00892 EamA-like transporter family APS40_RS23645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS40_RS23645 PF01411 tRNA synthetases class II (A) APS40_RS23645 PF02272 DHHA1 domain APS40_RS23650 PF00154 recA bacterial DNA recombination protein APS40_RS23665 PF00664 ABC transporter transmembrane region APS40_RS23665 PF00005 ABC transporter APS40_RS23670 PF00529 HlyD membrane-fusion protein of T1SS APS40_RS23670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS40_RS23675 PF00248 Aldo/keto reductase family APS40_RS23690 PF08448 PAS fold APS40_RS23690 PF00512 His Kinase A (phospho-acceptor) domain APS40_RS23690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS40_RS23690 PF00072 Response regulator receiver domain APS40_RS23690 PF13188 PAS domain APS40_RS23695 PF01312 FlhB HrpN YscU SpaS Family APS40_RS23700 PF01311 Bacterial export proteins, family 1 APS40_RS23705 PF01313 Bacterial export proteins, family 3 APS40_RS23710 PF02049 Flagellar hook-basal body complex protein FliE APS40_RS23715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS40_RS23720 PF00460 Flagella basal body rod protein APS40_RS23730 PF00813 FliP family APS40_RS23750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS40_RS23750 PF02154 Flagellar motor switch protein FliM APS40_RS23755 PF03748 Flagellar basal body-associated protein FliL APS40_RS23760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS40_RS23760 PF00460 Flagella basal body rod protein APS40_RS23765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS40_RS23765 PF00460 Flagella basal body rod protein APS40_RS23775 PF02107 Flagellar L-ring protein APS40_RS23780 PF02074 Carboxypeptidase Taq (M32) metallopeptidase APS40_RS23790 PF16326 ABC transporter C-terminal domain APS40_RS23790 PF00005 ABC transporter APS40_RS23790 PF12848 ABC transporter APS40_RS23800 PF02653 Branched-chain amino acid transport system / permease component APS40_RS23805 PF00005 ABC transporter APS40_RS23810 PF01850 PIN domain APS40_RS23830 PF00561 alpha/beta hydrolase fold APS40_RS23860 PF01258 Prokaryotic dksA/traR C4-type zinc finger APS40_RS23865 PF10768 Class II flagellar assembly regulator APS40_RS23870 PF02119 Flagellar P-ring protein APS40_RS23885 PF00700 Bacterial flagellin C-terminal helical region APS40_RS23885 PF00669 Bacterial flagellin N-terminal helical region APS40_RS23890 PF00669 Bacterial flagellin N-terminal helical region APS40_RS23890 PF00700 Bacterial flagellin C-terminal helical region APS40_RS23895 PF00700 Bacterial flagellin C-terminal helical region APS40_RS23895 PF00669 Bacterial flagellin N-terminal helical region APS40_RS23900 PF07378 Flagellar protein FlbT APS40_RS23915 PF07196 Flagellin hook IN motif APS40_RS23915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS40_RS23920 PF07559 Flagellar basal body protein FlaE APS40_RS23920 PF00460 Flagella basal body rod protein APS40_RS23920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS40_RS23935 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS23940 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS23945 PF08402 TOBE domain APS40_RS23945 PF00005 ABC transporter APS40_RS23960 PF04204 Homoserine O-succinyltransferase APS40_RS23980 PF04317 YcjX-like family, DUF463 APS40_RS23985 PF05128 Domain of unknown function (DUF697) APS40_RS23990 PF03358 NADPH-dependent FMN reductase APS40_RS24005 PF00892 EamA-like transporter family APS40_RS24010 PF01638 HxlR-like helix-turn-helix APS40_RS24015 PF03358 NADPH-dependent FMN reductase APS40_RS24025 PF00111 2Fe-2S iron-sulfur cluster binding domain APS40_RS24030 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS40_RS24035 PF01507 Phosphoadenosine phosphosulfate reductase family APS40_RS24040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS40_RS24040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS40_RS24050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS40_RS24050 PF10414 Sirohaem synthase dimerisation region APS40_RS24050 PF14824 Sirohaem biosynthesis protein central APS40_RS24065 PF00111 2Fe-2S iron-sulfur cluster binding domain APS40_RS24085 PF12832 MFS_1 like family APS40_RS24090 PF00534 Glycosyl transferases group 1 APS40_RS24090 PF13439 Glycosyltransferase Family 4 APS40_RS24105 PF00933 Glycosyl hydrolase family 3 N terminal domain APS40_RS24110 PF00501 AMP-binding enzyme APS40_RS24110 PF16177 Acetyl-coenzyme A synthetase N-terminus APS40_RS24110 PF13193 AMP-binding enzyme C-terminal domain APS40_RS24120 PF03741 Integral membrane protein TerC family APS40_RS24135 PF00924 Mechanosensitive ion channel APS40_RS24135 PF05552 Conserved TM helix APS40_RS24140 PF01625 Peptide methionine sulfoxide reductase APS40_RS24145 PF00155 Aminotransferase class I and II APS40_RS24165 PF00491 Arginase family APS40_RS24170 PF02423 Ornithine cyclodeaminase/mu-crystallin family APS40_RS24190 PF08502 LeuA allosteric (dimerisation) domain APS40_RS24190 PF00682 HMGL-like APS40_RS24210 PF00440 Bacterial regulatory proteins, tetR family APS40_RS24215 PF00248 Aldo/keto reductase family APS40_RS24220 PF02567 Phenazine biosynthesis-like protein APS40_RS24225 PF03928 Haem-degrading APS40_RS24245 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain APS40_RS24245 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APS40_RS24250 PF13977 BetI-type transcriptional repressor, C-terminal APS40_RS24250 PF00440 Bacterial regulatory proteins, tetR family APS40_RS24255 PF00248 Aldo/keto reductase family APS40_RS24275 PF00732 GMC oxidoreductase APS40_RS24275 PF05199 GMC oxidoreductase APS40_RS24280 PF00156 Phosphoribosyl transferase domain APS40_RS24285 PF00528 Binding-protein-dependent transport system inner membrane component APS40_RS24290 PF05448 Acetyl xylan esterase (AXE1) APS40_RS24295 PF00356 Bacterial regulatory proteins, lacI family APS40_RS24300 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain APS40_RS24300 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain APS40_RS24300 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain APS40_RS24300 PF08531 Alpha-L-rhamnosidase N-terminal domain