APS40_RS00045 SM00354 helix_turn _helix lactose operon repressor APS40_RS00100 SM00382 ATPases associated with a variety of cellular activities APS40_RS00175 SM00382 ATPases associated with a variety of cellular activities APS40_RS00180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS00220 SM00357 Cold shock protein domain APS40_RS00265 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APS40_RS00275 SM00244 prohibitin homologues APS40_RS00280 SM00244 prohibitin homologues APS40_RS00340 SM00155 Phospholipase D. Active site motifs. APS40_RS00375 SM00292 breast cancer carboxy-terminal domain APS40_RS00375 SM00532 Ligase N family APS40_RS00395 SM00864 Tubulin/FtsZ family, GTPase domain APS40_RS00395 SM00865 Tubulin/FtsZ family, C-terminal domain APS40_RS00400 SM00842 Cell division protein FtsA APS40_RS00465 SM00829 Enoylreductase APS40_RS00470 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS00480 SM00271 DnaJ molecular chaperone homology domain APS40_RS00495 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS00540 SM00450 Rhodanese Homology Domain APS40_RS00545 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS00570 SM00382 ATPases associated with a variety of cellular activities APS40_RS00585 SM00344 helix_turn_helix ASNC type APS40_RS00615 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS00655 SM00382 ATPases associated with a variety of cellular activities APS40_RS00660 SM00382 ATPases associated with a variety of cellular activities APS40_RS00715 SM00988 UreE urease accessory protein, N-terminal domain APS40_RS00740 SM00642 Alpha-amylase domain APS40_RS00760 SM00642 Alpha-amylase domain APS40_RS00790 SM00862 Transcriptional regulatory protein, C terminal APS40_RS00945 SM00400 zinc finger APS40_RS00945 SM00493 APS40_RS00945 APS40_RS00970 SM00267 diguanylate cyclase APS40_RS00985 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain APS40_RS00990 SM00829 Enoylreductase APS40_RS01000 SM00267 diguanylate cyclase APS40_RS01030 SM00382 ATPases associated with a variety of cellular activities APS40_RS01055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS01070 SM00421 helix_turn_helix, Lux Regulon APS40_RS01135 SM00851 MGS-like domain APS40_RS01135 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS40_RS01140 SM00382 ATPases associated with a variety of cellular activities APS40_RS01170 SM00357 Cold shock protein domain APS40_RS01255 SM00116 Domain in cystathionine beta-synthase and other proteins. APS40_RS01275 SM00382 ATPases associated with a variety of cellular activities APS40_RS01310 SM00247 Beta/gamma crystallins APS40_RS01315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS01335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS01350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS01365 SM00487 DEAD-like helicases superfamily APS40_RS01365 SM00490 helicase superfamily c-terminal domain APS40_RS01425 SM00287 Bacterial SH3 domain homologues APS40_RS01430 SM00287 Bacterial SH3 domain homologues APS40_RS01460 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APS40_RS01460 SM00465 GIY-YIG type nucleases (URI domain) APS40_RS01475 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS01535 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS01590 SM01400 APS40_RS01590 APS40_RS01765 SM00829 Enoylreductase APS40_RS01795 SM00422 helix_turn_helix, mercury resistance APS40_RS01810 SM00829 Enoylreductase APS40_RS01815 SM00382 ATPases associated with a variety of cellular activities APS40_RS01835 SM00052 Putative diguanylate phosphodiesterase APS40_RS01835 SM00267 diguanylate cyclase APS40_RS01855 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain APS40_RS01890 SM00382 ATPases associated with a variety of cellular activities APS40_RS01900 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APS40_RS01905 SM01092 CO dehydrogenase flavoprotein C-terminal domain APS40_RS01920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS01960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS01970 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS02010 SM00487 DEAD-like helicases superfamily APS40_RS02010 SM00490 helicase superfamily c-terminal domain APS40_RS02085 SM00382 ATPases associated with a variety of cellular activities APS40_RS02105 SM00354 helix_turn _helix lactose operon repressor APS40_RS02150 SM00382 ATPases associated with a variety of cellular activities APS40_RS02155 SM00450 Rhodanese Homology Domain APS40_RS02160 SM00872 Alpha mannosidase, middle domain APS40_RS02175 SM00382 ATPases associated with a variety of cellular activities APS40_RS02185 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS02185 SM00895 APS40_RS02185 APS40_RS02205 SM00382 ATPases associated with a variety of cellular activities APS40_RS02235 SM00460 Transglutaminase/protease-like homologues APS40_RS02245 SM00460 Transglutaminase/protease-like homologues APS40_RS02270 SM00387 Histidine kinase-like ATPases APS40_RS02275 SM00419 helix_turn_helix, cAMP Regulatory protein APS40_RS02295 SM00448 cheY-homologous receiver domain APS40_RS02310 SM00382 ATPases associated with a variety of cellular activities APS40_RS02315 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS02315 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APS40_RS02345 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS02345 SM00895 APS40_RS02345 APS40_RS02430 SM00382 ATPases associated with a variety of cellular activities APS40_RS02450 SM00849 Metallo-beta-lactamase superfamily APS40_RS02465 SM00382 ATPases associated with a variety of cellular activities APS40_RS02470 SM00382 ATPases associated with a variety of cellular activities APS40_RS02485 SM00448 cheY-homologous receiver domain APS40_RS02485 SM00862 Transcriptional regulatory protein, C terminal APS40_RS02490 SM00387 Histidine kinase-like ATPases APS40_RS02530 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS02530 SM00895 APS40_RS02530 APS40_RS02565 SM00382 ATPases associated with a variety of cellular activities APS40_RS02620 SM00382 ATPases associated with a variety of cellular activities APS40_RS02645 SM00382 ATPases associated with a variety of cellular activities APS40_RS02665 SM00564 beta-propeller repeat APS40_RS02705 SM00448 cheY-homologous receiver domain APS40_RS02780 SM00091 PAS domain APS40_RS02780 SM00387 Histidine kinase-like ATPases APS40_RS02780 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS02780 SM00448 cheY-homologous receiver domain APS40_RS02785 SM00046 Diacylglycerol kinase catalytic domain (presumed) APS40_RS02795 SM00357 Cold shock protein domain APS40_RS02850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APS40_RS02850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS02850 SM00091 PAS domain APS40_RS02850 SM00911 HWE histidine kinase APS40_RS02855 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS02855 SM00419 helix_turn_helix, cAMP Regulatory protein APS40_RS02870 SM00642 Alpha-amylase domain APS40_RS02900 SM00984 UDP binding domain APS40_RS03050 SM00883 Chaperonin 10 Kd subunit APS40_RS03080 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS03080 SM00895 APS40_RS03080 APS40_RS03120 SM00382 ATPases associated with a variety of cellular activities APS40_RS03135 SM00382 ATPases associated with a variety of cellular activities APS40_RS03140 SM00382 ATPases associated with a variety of cellular activities APS40_RS03175 SM00287 Bacterial SH3 domain homologues APS40_RS03190 SM00387 Histidine kinase-like ATPases APS40_RS03190 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS03225 SM00382 ATPases associated with a variety of cellular activities APS40_RS03245 SM00354 helix_turn _helix lactose operon repressor APS40_RS03270 SM00640 Glycosyl hydrolases family 32 APS40_RS03275 SM00354 helix_turn _helix lactose operon repressor APS40_RS03280 SM00382 ATPases associated with a variety of cellular activities APS40_RS03285 SM00382 ATPases associated with a variety of cellular activities APS40_RS03310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS03315 SM00316 Ribosomal protein S1-like RNA-binding domain APS40_RS03315 SM00732 Likely ribonuclease with RNase H fold. APS40_RS03330 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS03360 SM00382 ATPases associated with a variety of cellular activities APS40_RS03365 SM00382 ATPases associated with a variety of cellular activities APS40_RS03450 SM00564 beta-propeller repeat APS40_RS03505 SM01043 Bacterial transcriptional activator domain APS40_RS03515 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS03515 SM00895 APS40_RS03515 APS40_RS03520 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS03525 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS03535 SM00382 ATPases associated with a variety of cellular activities APS40_RS03565 SM00382 ATPases associated with a variety of cellular activities APS40_RS03580 SM00387 Histidine kinase-like ATPases APS40_RS03580 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS03585 SM00448 cheY-homologous receiver domain APS40_RS03585 SM00862 Transcriptional regulatory protein, C terminal APS40_RS03595 SM01091 Transporter associated domain APS40_RS03620 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS03650 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS03670 SM00760 Bacterial dnaA protein helix-turn-helix domain APS40_RS03690 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APS40_RS03695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS03735 SM00448 cheY-homologous receiver domain APS40_RS03785 SM00382 ATPases associated with a variety of cellular activities APS40_RS03825 SM00357 Cold shock protein domain APS40_RS03885 SM00357 Cold shock protein domain APS40_RS03920 SM00382 ATPases associated with a variety of cellular activities APS40_RS03945 SM01130 APS40_RS03945 APS40_RS03950 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS03950 SM00895 APS40_RS03950 APS40_RS03970 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS04000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS04005 SM00421 helix_turn_helix, Lux Regulon APS40_RS04200 SM00448 cheY-homologous receiver domain APS40_RS04200 SM00862 Transcriptional regulatory protein, C terminal APS40_RS04205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS04205 SM00387 Histidine kinase-like ATPases APS40_RS04205 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS04220 SM00382 ATPases associated with a variety of cellular activities APS40_RS04230 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS04240 SM00382 ATPases associated with a variety of cellular activities APS40_RS04295 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS04295 SM00866 APS40_RS04295 APS40_RS04325 SM00354 helix_turn _helix lactose operon repressor APS40_RS04345 SM00382 ATPases associated with a variety of cellular activities APS40_RS04370 SM01130 APS40_RS04370 APS40_RS04375 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS04375 SM00895 APS40_RS04375 APS40_RS04385 SM00421 helix_turn_helix, Lux Regulon APS40_RS04385 SM00448 cheY-homologous receiver domain APS40_RS04390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APS40_RS04390 SM00387 Histidine kinase-like ATPases APS40_RS04410 SM00382 ATPases associated with a variety of cellular activities APS40_RS04415 SM00382 ATPases associated with a variety of cellular activities APS40_RS04445 SM00382 ATPases associated with a variety of cellular activities APS40_RS04490 SM00382 ATPases associated with a variety of cellular activities APS40_RS04510 SM01130 APS40_RS04510 APS40_RS04520 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS04520 SM00895 APS40_RS04520 APS40_RS04540 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS04540 SM00895 APS40_RS04540 APS40_RS04560 SM00382 ATPases associated with a variety of cellular activities APS40_RS04610 SM00354 helix_turn _helix lactose operon repressor APS40_RS04620 SM00382 ATPases associated with a variety of cellular activities APS40_RS04675 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS04700 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS04745 SM00382 ATPases associated with a variety of cellular activities APS40_RS04765 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS04780 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APS40_RS04785 SM01092 CO dehydrogenase flavoprotein C-terminal domain APS40_RS04800 SM01134 APS40_RS04800 APS40_RS04825 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS04865 SM00354 helix_turn _helix lactose operon repressor APS40_RS04890 SM00382 ATPases associated with a variety of cellular activities APS40_RS04915 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS04930 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS04950 SM00382 ATPases associated with a variety of cellular activities APS40_RS04955 SM00382 ATPases associated with a variety of cellular activities APS40_RS04970 SM00382 ATPases associated with a variety of cellular activities APS40_RS04995 SM00354 helix_turn _helix lactose operon repressor APS40_RS05025 SM00354 helix_turn _helix lactose operon repressor APS40_RS05035 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APS40_RS05035 SM00267 diguanylate cyclase APS40_RS05055 SM00382 ATPases associated with a variety of cellular activities APS40_RS05060 SM00382 ATPases associated with a variety of cellular activities APS40_RS05085 SM00223 APPLE domain APS40_RS05085 SM01359 APS40_RS05085 APS40_RS05085 SM01360 APS40_RS05085 APS40_RS05090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APS40_RS05105 SM00382 ATPases associated with a variety of cellular activities APS40_RS05125 SM01012 APS40_RS05125 APS40_RS05130 SM00419 helix_turn_helix, cAMP Regulatory protein APS40_RS05135 SM00382 ATPases associated with a variety of cellular activities APS40_RS05150 SM00822 APS40_RS05150 APS40_RS05190 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS05190 SM00866 APS40_RS05190 APS40_RS05240 SM00382 ATPases associated with a variety of cellular activities APS40_RS05265 SM00841 Elongation factor P, C-terminal APS40_RS05265 SM01185 APS40_RS05265 APS40_RS05275 SM00986 Uracil DNA glycosylase superfamily APS40_RS05275 SM00987 UreE urease accessory protein, C-terminal domain APS40_RS05290 SM00327 von Willebrand factor (vWF) type A domain APS40_RS05350 SM00382 ATPases associated with a variety of cellular activities APS40_RS05350 SM00448 cheY-homologous receiver domain APS40_RS05385 SM00382 ATPases associated with a variety of cellular activities APS40_RS05390 SM00448 cheY-homologous receiver domain APS40_RS05390 SM00862 Transcriptional regulatory protein, C terminal APS40_RS05400 SM00869 Autotransporter beta-domain APS40_RS05405 SM00448 cheY-homologous receiver domain APS40_RS05435 SM00363 S4 RNA-binding domain APS40_RS05465 SM00382 ATPases associated with a variety of cellular activities APS40_RS05485 SM00788 Adenylosuccinate synthetase APS40_RS05510 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS05550 SM00248 ankyrin repeats APS40_RS05555 SM00564 beta-propeller repeat APS40_RS05585 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS05595 SM00671 Sel1-like repeats. APS40_RS05620 SM00382 ATPases associated with a variety of cellular activities APS40_RS05625 SM00354 helix_turn _helix lactose operon repressor APS40_RS05655 SM00382 ATPases associated with a variety of cellular activities APS40_RS05675 SM00354 helix_turn _helix lactose operon repressor APS40_RS05700 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS05700 SM00895 APS40_RS05700 APS40_RS05720 SM00421 helix_turn_helix, Lux Regulon APS40_RS05740 SM00028 Tetratricopeptide repeats APS40_RS05740 SM01043 Bacterial transcriptional activator domain APS40_RS05775 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS05830 SM00382 ATPases associated with a variety of cellular activities APS40_RS05870 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. APS40_RS05885 SM00382 ATPases associated with a variety of cellular activities APS40_RS05895 SM00966 SpoVT / AbrB like domain APS40_RS05910 SM00267 diguanylate cyclase APS40_RS05915 SM00267 diguanylate cyclase APS40_RS05940 SM00267 diguanylate cyclase APS40_RS05970 SM00861 Transketolase, pyrimidine binding domain APS40_RS05975 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APS40_RS06010 SM00671 Sel1-like repeats. APS40_RS06030 SM00382 ATPases associated with a variety of cellular activities APS40_RS06055 SM00829 Enoylreductase APS40_RS06090 SM01001 AIR carboxylase APS40_RS06150 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APS40_RS06150 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APS40_RS06170 SM00448 cheY-homologous receiver domain APS40_RS06185 SM00861 Transketolase, pyrimidine binding domain APS40_RS06210 SM00382 ATPases associated with a variety of cellular activities APS40_RS06235 SM00052 Putative diguanylate phosphodiesterase APS40_RS06235 SM00091 PAS domain APS40_RS06235 SM00267 diguanylate cyclase APS40_RS06265 SM00448 cheY-homologous receiver domain APS40_RS06270 SM00382 ATPases associated with a variety of cellular activities APS40_RS06275 SM00382 ATPases associated with a variety of cellular activities APS40_RS06315 SM00422 helix_turn_helix, mercury resistance APS40_RS06335 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS06340 SM01264 APS40_RS06340 APS40_RS06350 SM00382 ATPases associated with a variety of cellular activities APS40_RS06410 SM00448 cheY-homologous receiver domain APS40_RS06470 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS06475 SM00248 ankyrin repeats APS40_RS06510 SM00244 prohibitin homologues APS40_RS06515 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen APS40_RS06595 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS06675 SM00746 metallochaperone-like domain APS40_RS06680 SM00422 helix_turn_helix, mercury resistance APS40_RS06715 SM00858 APS40_RS06715 APS40_RS06720 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS06720 SM00895 APS40_RS06720 APS40_RS06760 SM00028 Tetratricopeptide repeats APS40_RS06805 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS06825 SM00382 ATPases associated with a variety of cellular activities APS40_RS06855 SM00382 ATPases associated with a variety of cellular activities APS40_RS06860 SM00382 ATPases associated with a variety of cellular activities APS40_RS06890 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS06895 SM01119 APS40_RS06895 APS40_RS06905 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS06950 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS06980 SM00028 Tetratricopeptide repeats APS40_RS06985 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen APS40_RS06995 SM00354 helix_turn _helix lactose operon repressor APS40_RS07005 SM00382 ATPases associated with a variety of cellular activities APS40_RS07060 SM00382 ATPases associated with a variety of cellular activities APS40_RS07080 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS07100 SM00382 ATPases associated with a variety of cellular activities APS40_RS07105 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS07105 SM00895 APS40_RS07105 APS40_RS07110 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS07110 SM00895 APS40_RS07110 APS40_RS07115 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS07180 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS07180 SM00866 APS40_RS07180 APS40_RS07215 SM00382 ATPases associated with a variety of cellular activities APS40_RS07220 SM01130 APS40_RS07220 APS40_RS07225 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS07225 SM00895 APS40_RS07225 APS40_RS07235 SM01120 APS40_RS07235 APS40_RS07275 SM00671 Sel1-like repeats. APS40_RS07300 SM00671 Sel1-like repeats. APS40_RS07325 SM00382 ATPases associated with a variety of cellular activities APS40_RS07375 SM00155 Phospholipase D. Active site motifs. APS40_RS07385 SM00382 ATPases associated with a variety of cellular activities APS40_RS07385 SM01086 C-terminal, D2-small domain, of ClpB protein APS40_RS07395 SM00382 ATPases associated with a variety of cellular activities APS40_RS07415 SM00937 APS40_RS07415 APS40_RS07420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APS40_RS07505 SM00957 SecA DEAD-like domain APS40_RS07505 SM00958 SecA preprotein cross-linking domain APS40_RS07600 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APS40_RS07600 SM00475 5'-3' exonuclease APS40_RS07615 SM00271 DnaJ molecular chaperone homology domain APS40_RS07630 SM00327 von Willebrand factor (vWF) type A domain APS40_RS07670 SM00490 helicase superfamily c-terminal domain APS40_RS07675 SM00363 S4 RNA-binding domain APS40_RS07685 SM01058 CarD-like/TRCF domain APS40_RS07720 SM00318 Staphylococcal nuclease homologues APS40_RS07770 SM00758 APS40_RS07770 APS40_RS07770 SM01217 APS40_RS07770 APS40_RS07790 SM00422 helix_turn_helix, mercury resistance APS40_RS07860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS07865 SM00507 HNH nucleases APS40_RS07875 SM00478 endonuclease III APS40_RS07915 SM01266 APS40_RS07915 APS40_RS07960 SM00448 cheY-homologous receiver domain APS40_RS07970 SM00382 ATPases associated with a variety of cellular activities APS40_RS07980 SM00563 Phosphate acyltransferases APS40_RS08020 SM00849 Metallo-beta-lactamase superfamily APS40_RS08085 SM00878 Biotin carboxylase C-terminal domain APS40_RS08100 SM00052 Putative diguanylate phosphodiesterase APS40_RS08100 SM00267 diguanylate cyclase APS40_RS08125 SM00953 APS40_RS08125 APS40_RS08145 SM00382 ATPases associated with a variety of cellular activities APS40_RS08150 SM00382 ATPases associated with a variety of cellular activities APS40_RS08155 SM00851 MGS-like domain APS40_RS08170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS08170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS08175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS08175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS08180 SM00448 cheY-homologous receiver domain APS40_RS08185 SM00448 cheY-homologous receiver domain APS40_RS08190 SM00138 Methyltransferase, chemotaxis proteins APS40_RS08195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS08215 SM00382 ATPases associated with a variety of cellular activities APS40_RS08240 SM00382 ATPases associated with a variety of cellular activities APS40_RS08260 SM00382 ATPases associated with a variety of cellular activities APS40_RS08270 SM00382 ATPases associated with a variety of cellular activities APS40_RS08275 SM00382 ATPases associated with a variety of cellular activities APS40_RS08305 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS08305 SM00866 APS40_RS08305 APS40_RS08320 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS08330 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS08330 SM00895 APS40_RS08330 APS40_RS08340 SM00382 ATPases associated with a variety of cellular activities APS40_RS08355 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS08360 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS08360 SM00895 APS40_RS08360 APS40_RS08395 SM00382 ATPases associated with a variety of cellular activities APS40_RS08410 SM00382 ATPases associated with a variety of cellular activities APS40_RS08435 SM00382 ATPases associated with a variety of cellular activities APS40_RS08470 SM00382 ATPases associated with a variety of cellular activities APS40_RS08505 SM00822 APS40_RS08505 APS40_RS08545 SM00014 Acid phosphatase homologues APS40_RS08555 SM00448 cheY-homologous receiver domain APS40_RS08555 SM00862 Transcriptional regulatory protein, C terminal APS40_RS08560 SM00387 Histidine kinase-like ATPases APS40_RS08560 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS08595 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS08595 SM00895 APS40_RS08595 APS40_RS08605 SM00382 ATPases associated with a variety of cellular activities APS40_RS08635 SM00382 ATPases associated with a variety of cellular activities APS40_RS08640 SM00382 ATPases associated with a variety of cellular activities APS40_RS08660 SM00420 helix_turn_helix, Deoxyribose operon repressor APS40_RS08660 SM01134 APS40_RS08660 APS40_RS08670 SM00861 Transketolase, pyrimidine binding domain APS40_RS08695 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS08695 SM00895 APS40_RS08695 APS40_RS08700 SM01060 APS40_RS08700 APS40_RS08725 SM00831 Cation transporter/ATPase, N-terminus APS40_RS08730 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS08735 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS08735 SM00419 helix_turn_helix, cAMP Regulatory protein APS40_RS08790 SM00382 ATPases associated with a variety of cellular activities APS40_RS08815 SM00871 Bacterial transcription activator, effector binding domain APS40_RS08825 SM01133 APS40_RS08825 APS40_RS08865 SM00749 bacterial OsmY and nodulation domain APS40_RS08910 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS08910 SM00419 helix_turn_helix, cAMP Regulatory protein APS40_RS08920 SM00421 helix_turn_helix, Lux Regulon APS40_RS08920 SM00448 cheY-homologous receiver domain APS40_RS08925 SM00091 PAS domain APS40_RS08925 SM00387 Histidine kinase-like ATPases APS40_RS08925 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS08945 SM00881 CoA binding domain APS40_RS08955 SM00831 Cation transporter/ATPase, N-terminus APS40_RS08995 SM00448 cheY-homologous receiver domain APS40_RS08995 SM00862 Transcriptional regulatory protein, C terminal APS40_RS09000 SM00387 Histidine kinase-like ATPases APS40_RS09000 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS09050 SM00749 bacterial OsmY and nodulation domain APS40_RS09080 SM01400 APS40_RS09080 APS40_RS09100 SM00247 Beta/gamma crystallins APS40_RS09100 SM00287 Bacterial SH3 domain homologues APS40_RS09110 SM00829 Enoylreductase APS40_RS09155 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APS40_RS09185 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APS40_RS09185 SM00245 tail specific protease APS40_RS09205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS09205 SM00091 PAS domain APS40_RS09205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS09210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS09210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS09215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS09215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS09225 SM00382 ATPases associated with a variety of cellular activities APS40_RS09245 SM00487 DEAD-like helicases superfamily APS40_RS09245 SM00490 helicase superfamily c-terminal domain APS40_RS09270 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS09270 SM00895 APS40_RS09270 APS40_RS09275 SM00869 Autotransporter beta-domain APS40_RS09290 SM00861 Transketolase, pyrimidine binding domain APS40_RS09295 SM00881 CoA binding domain APS40_RS09405 SM00947 Carbonic anhydrase APS40_RS09415 SM00859 Semialdehyde dehydrogenase, NAD binding domain APS40_RS09460 SM00354 helix_turn _helix lactose operon repressor APS40_RS09480 SM00382 ATPases associated with a variety of cellular activities APS40_RS09485 SM00382 ATPases associated with a variety of cellular activities APS40_RS09495 SM00382 ATPases associated with a variety of cellular activities APS40_RS09525 SM00382 ATPases associated with a variety of cellular activities APS40_RS09555 SM00822 APS40_RS09555 APS40_RS09605 SM00267 diguanylate cyclase APS40_RS09610 SM00382 ATPases associated with a variety of cellular activities APS40_RS09640 SM00829 Enoylreductase APS40_RS09655 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS09660 SM00052 Putative diguanylate phosphodiesterase APS40_RS09660 SM00267 diguanylate cyclase APS40_RS09675 SM00354 helix_turn _helix lactose operon repressor APS40_RS09715 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS09715 SM00866 APS40_RS09715 APS40_RS09800 SM00966 SpoVT / AbrB like domain APS40_RS09825 SM00798 AICARFT/IMPCHase bienzyme APS40_RS09825 SM00851 MGS-like domain APS40_RS09850 SM00267 diguanylate cyclase APS40_RS09870 SM00859 Semialdehyde dehydrogenase, NAD binding domain APS40_RS09880 SM00938 Nitrogen regulatory protein P-II APS40_RS09895 SM00382 ATPases associated with a variety of cellular activities APS40_RS09900 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. APS40_RS09930 SM01329 APS40_RS09930 APS40_RS09935 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APS40_RS09955 SM00464 Found in ATP-dependent protease La (LON) APS40_RS09990 SM00382 ATPases associated with a variety of cellular activities APS40_RS10030 SM00382 ATPases associated with a variety of cellular activities APS40_RS10035 SM00382 ATPases associated with a variety of cellular activities APS40_RS10040 SM00318 Staphylococcal nuclease homologues APS40_RS10060 SM00564 beta-propeller repeat APS40_RS10135 SM00671 Sel1-like repeats. APS40_RS10155 SM01192 APS40_RS10155 APS40_RS10155 SM01193 APS40_RS10155 APS40_RS10170 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS10185 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APS40_RS10185 SM01080 APS40_RS10185 APS40_RS10215 SM00849 Metallo-beta-lactamase superfamily APS40_RS10260 SM00382 ATPases associated with a variety of cellular activities APS40_RS10260 SM00962 SRP54-type protein, GTPase domain APS40_RS10260 SM00963 SRP54-type protein, helical bundle domain APS40_RS10285 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS10290 SM00382 ATPases associated with a variety of cellular activities APS40_RS10290 SM00962 SRP54-type protein, GTPase domain APS40_RS10290 SM00963 SRP54-type protein, helical bundle domain APS40_RS10320 SM00382 ATPases associated with a variety of cellular activities APS40_RS10425 SM00052 Putative diguanylate phosphodiesterase APS40_RS10425 SM00091 PAS domain APS40_RS10425 SM00267 diguanylate cyclase APS40_RS10435 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS10440 SM00838 Elongation factor G C-terminus APS40_RS10480 SM01152 APS40_RS10480 APS40_RS10490 SM00822 APS40_RS10490 APS40_RS10515 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS10595 SM00260 Two component signalling adaptor domain APS40_RS10600 SM00073 Histidine Phosphotransfer domain APS40_RS10600 SM00260 Two component signalling adaptor domain APS40_RS10600 SM00387 Histidine kinase-like ATPases APS40_RS10600 SM01231 APS40_RS10600 APS40_RS10605 SM00448 cheY-homologous receiver domain APS40_RS10625 SM00829 Enoylreductase APS40_RS10635 SM00382 ATPases associated with a variety of cellular activities APS40_RS10650 SM00843 APS40_RS10650 APS40_RS10660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS10680 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS10685 SM00448 cheY-homologous receiver domain APS40_RS10685 SM00862 Transcriptional regulatory protein, C terminal APS40_RS10690 SM00354 helix_turn _helix lactose operon repressor APS40_RS10715 SM00155 Phospholipase D. Active site motifs. APS40_RS10745 SM00470 ParB-like nuclease domain APS40_RS10760 SM01228 APS40_RS10760 APS40_RS10770 SM00357 Cold shock protein domain APS40_RS10770 SM00382 ATPases associated with a variety of cellular activities APS40_RS10770 SM00959 Rho termination factor, N-terminal domain APS40_RS10800 SM00479 APS40_RS10800 APS40_RS10815 SM00978 APS40_RS10815 APS40_RS10820 SM00463 Small MutS-related domain APS40_RS10825 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS10840 SM00382 ATPases associated with a variety of cellular activities APS40_RS10855 SM00382 ATPases associated with a variety of cellular activities APS40_RS10855 SM01086 C-terminal, D2-small domain, of ClpB protein APS40_RS10930 SM00478 endonuclease III APS40_RS10930 SM00525 APS40_RS10930 APS40_RS10940 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS10945 SM00855 Phosphoglycerate mutase family APS40_RS10955 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APS40_RS10960 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS10975 SM00271 DnaJ molecular chaperone homology domain APS40_RS11040 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS11045 SM01400 APS40_RS11045 APS40_RS11065 SM00825 Beta-ketoacyl synthase APS40_RS11080 SM00287 Bacterial SH3 domain homologues APS40_RS11100 SM00267 diguanylate cyclase APS40_RS11110 SM00354 helix_turn _helix lactose operon repressor APS40_RS11130 SM00448 cheY-homologous receiver domain APS40_RS11130 SM00862 Transcriptional regulatory protein, C terminal APS40_RS11135 SM00387 Histidine kinase-like ATPases APS40_RS11135 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS11160 SM00829 Enoylreductase APS40_RS11170 SM00316 Ribosomal protein S1-like RNA-binding domain APS40_RS11170 SM00322 K homology RNA-binding domain APS40_RS11190 SM00382 ATPases associated with a variety of cellular activities APS40_RS11205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS11225 SM00382 ATPases associated with a variety of cellular activities APS40_RS11245 SM00911 HWE histidine kinase APS40_RS11250 SM01387 APS40_RS11250 APS40_RS11255 SM00316 Ribosomal protein S1-like RNA-binding domain APS40_RS11255 SM00322 K homology RNA-binding domain APS40_RS11310 SM00116 Domain in cystathionine beta-synthase and other proteins. APS40_RS11310 SM01091 Transporter associated domain APS40_RS11325 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS11340 SM00563 Phosphate acyltransferases APS40_RS11360 SM00932 Scaffold protein Nfu/NifU N terminal APS40_RS11375 SM00829 Enoylreductase APS40_RS11385 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS11395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APS40_RS11400 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APS40_RS11400 SM00534 ATPase domain of DNA mismatch repair MUTS family APS40_RS11420 SM00354 helix_turn _helix lactose operon repressor APS40_RS11455 SM00357 Cold shock protein domain APS40_RS11475 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS11515 SM00354 helix_turn _helix lactose operon repressor APS40_RS11540 SM00640 Glycosyl hydrolases family 32 APS40_RS11580 SM00382 ATPases associated with a variety of cellular activities APS40_RS11600 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS11625 SM00641 Glycosyl hydrolases family 25 APS40_RS11755 SM00354 helix_turn _helix lactose operon repressor APS40_RS11760 SM00382 ATPases associated with a variety of cellular activities APS40_RS11795 SM00855 Phosphoglycerate mutase family APS40_RS11810 SM00966 SpoVT / AbrB like domain APS40_RS11825 SM00448 cheY-homologous receiver domain APS40_RS11830 SM00363 S4 RNA-binding domain APS40_RS11855 SM00271 DnaJ molecular chaperone homology domain APS40_RS11880 SM00849 Metallo-beta-lactamase superfamily APS40_RS11900 SM00448 cheY-homologous receiver domain APS40_RS11900 SM00862 Transcriptional regulatory protein, C terminal APS40_RS11905 SM00387 Histidine kinase-like ATPases APS40_RS11910 SM00858 APS40_RS11910 APS40_RS11925 SM00028 Tetratricopeptide repeats APS40_RS11960 SM00382 ATPases associated with a variety of cellular activities APS40_RS11965 SM00481 DNA polymerase alpha chain like domain APS40_RS11970 SM00354 helix_turn _helix lactose operon repressor APS40_RS12005 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS12020 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS12030 SM01119 APS40_RS12030 APS40_RS12070 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS12085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS12085 SM00091 PAS domain APS40_RS12085 SM00911 HWE histidine kinase APS40_RS12105 SM00382 ATPases associated with a variety of cellular activities APS40_RS12110 SM00382 ATPases associated with a variety of cellular activities APS40_RS12120 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS12120 SM00895 APS40_RS12120 APS40_RS12150 SM00354 helix_turn _helix lactose operon repressor APS40_RS12185 SM00382 ATPases associated with a variety of cellular activities APS40_RS12200 SM00354 helix_turn _helix lactose operon repressor APS40_RS12230 SM00382 ATPases associated with a variety of cellular activities APS40_RS12240 SM00420 helix_turn_helix, Deoxyribose operon repressor APS40_RS12240 SM01134 APS40_RS12240 APS40_RS12245 SM01007 Class II Aldolase and Adducin N-terminal domain APS40_RS12295 SM00849 Metallo-beta-lactamase superfamily APS40_RS12295 SM01027 Beta-Casp domain APS40_RS12300 SM00448 cheY-homologous receiver domain APS40_RS12305 SM00387 Histidine kinase-like ATPases APS40_RS12305 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS12335 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS12355 SM00387 Histidine kinase-like ATPases APS40_RS12355 SM00433 TopoisomeraseII APS40_RS12360 SM00382 ATPases associated with a variety of cellular activities APS40_RS12365 SM00480 DNA polymerase III beta subunit APS40_RS12375 SM00382 ATPases associated with a variety of cellular activities APS40_RS12375 SM00760 Bacterial dnaA protein helix-turn-helix domain APS40_RS12385 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APS40_RS12385 SM01232 APS40_RS12385 APS40_RS12425 SM00382 ATPases associated with a variety of cellular activities APS40_RS12460 SM00886 Stress responsive A/B Barrel Domain APS40_RS12485 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS12490 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS12500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS12505 SM00813 Alpha-L-arabinofuranosidase C-terminus APS40_RS12510 SM00869 Autotransporter beta-domain APS40_RS12525 SM00421 helix_turn_helix, Lux Regulon APS40_RS12540 SM00564 beta-propeller repeat APS40_RS12565 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS12570 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS12570 SM00895 APS40_RS12570 APS40_RS12590 SM00382 ATPases associated with a variety of cellular activities APS40_RS12595 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS12600 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS12605 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS12650 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS12650 SM00895 APS40_RS12650 APS40_RS12655 SM00382 ATPases associated with a variety of cellular activities APS40_RS12675 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS12680 SM00346 helix_turn_helix isocitrate lyase regulation APS40_RS12690 SM01130 APS40_RS12690 APS40_RS12715 SM00382 ATPases associated with a variety of cellular activities APS40_RS12720 SM00382 ATPases associated with a variety of cellular activities APS40_RS12725 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS12725 SM00419 helix_turn_helix, cAMP Regulatory protein APS40_RS12735 SM00382 ATPases associated with a variety of cellular activities APS40_RS12775 SM01350 APS40_RS12775 APS40_RS12790 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS12840 SM00223 APPLE domain APS40_RS12895 SM00838 Elongation factor G C-terminus APS40_RS12930 SM00046 Diacylglycerol kinase catalytic domain (presumed) APS40_RS12965 SM00850 LytTr DNA-binding domain APS40_RS12975 SM00450 Rhodanese Homology Domain APS40_RS12990 SM00873 B3/4 domain APS40_RS12990 SM00874 tRNA synthetase B5 domain APS40_RS12990 SM00896 Ferredoxin-fold anticodon binding domain APS40_RS13015 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS13095 SM00354 helix_turn _helix lactose operon repressor APS40_RS13100 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS13100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APS40_RS13110 SM00382 ATPases associated with a variety of cellular activities APS40_RS13195 SM00382 ATPases associated with a variety of cellular activities APS40_RS13210 SM00474 3'-5' exonuclease APS40_RS13245 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS13255 SM00567 E-Z type HEAT repeats APS40_RS13270 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS13305 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS13305 SM00895 APS40_RS13305 APS40_RS13325 SM00382 ATPases associated with a variety of cellular activities APS40_RS13330 SM00382 ATPases associated with a variety of cellular activities APS40_RS13335 SM01130 APS40_RS13335 APS40_RS13405 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS13445 SM00387 Histidine kinase-like ATPases APS40_RS13445 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS13450 SM00448 cheY-homologous receiver domain APS40_RS13450 SM00862 Transcriptional regulatory protein, C terminal APS40_RS13475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS13480 SM00226 Low molecular weight phosphatase family APS40_RS13510 SM00316 Ribosomal protein S1-like RNA-binding domain APS40_RS13525 SM00862 Transcriptional regulatory protein, C terminal APS40_RS13540 SM00411 bacterial (prokaryotic) histone like domain APS40_RS13605 SM00387 Histidine kinase-like ATPases APS40_RS13605 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS13610 SM00996 S-adenosyl-L-homocysteine hydrolase APS40_RS13610 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APS40_RS13635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS13635 SM00387 Histidine kinase-like ATPases APS40_RS13635 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS13640 SM00448 cheY-homologous receiver domain APS40_RS13640 SM00862 Transcriptional regulatory protein, C terminal APS40_RS13660 SM00271 DnaJ molecular chaperone homology domain APS40_RS13700 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APS40_RS13700 SM00474 3'-5' exonuclease APS40_RS13700 SM00475 5'-3' exonuclease APS40_RS13700 SM00482 DNA polymerase A domain APS40_RS13705 SM00829 Enoylreductase APS40_RS13710 SM00287 Bacterial SH3 domain homologues APS40_RS13725 SM00421 helix_turn_helix, Lux Regulon APS40_RS13780 SM00448 cheY-homologous receiver domain APS40_RS13785 SM00387 Histidine kinase-like ATPases APS40_RS13800 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS13815 SM00382 ATPases associated with a variety of cellular activities APS40_RS13820 SM00382 ATPases associated with a variety of cellular activities APS40_RS13840 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS13845 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS13860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APS40_RS13900 SM00382 ATPases associated with a variety of cellular activities APS40_RS13935 SM00448 cheY-homologous receiver domain APS40_RS13935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APS40_RS13945 SM00448 cheY-homologous receiver domain APS40_RS13950 SM00073 Histidine Phosphotransfer domain APS40_RS13950 SM00260 Two component signalling adaptor domain APS40_RS13950 SM00387 Histidine kinase-like ATPases APS40_RS13950 SM01231 APS40_RS13950 APS40_RS13955 SM00260 Two component signalling adaptor domain APS40_RS13960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS13960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS13965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APS40_RS13965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS13970 SM00260 Two component signalling adaptor domain APS40_RS13975 SM00138 Methyltransferase, chemotaxis proteins APS40_RS13980 SM00448 cheY-homologous receiver domain APS40_RS14000 SM00354 helix_turn _helix lactose operon repressor APS40_RS14040 SM00052 Putative diguanylate phosphodiesterase APS40_RS14040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS14040 SM00267 diguanylate cyclase APS40_RS14045 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS14065 SM01119 APS40_RS14065 APS40_RS14080 SM00052 Putative diguanylate phosphodiesterase APS40_RS14080 SM00267 diguanylate cyclase APS40_RS14110 SM00382 ATPases associated with a variety of cellular activities APS40_RS14160 SM00421 helix_turn_helix, Lux Regulon APS40_RS14180 SM00267 diguanylate cyclase APS40_RS14210 SM00072 Guanylate kinase homologues. APS40_RS14285 SM00382 ATPases associated with a variety of cellular activities APS40_RS14290 SM00382 ATPases associated with a variety of cellular activities APS40_RS14295 SM00052 Putative diguanylate phosphodiesterase APS40_RS14295 SM00267 diguanylate cyclase APS40_RS14310 SM00382 ATPases associated with a variety of cellular activities APS40_RS14340 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS14360 SM00833 Cobalamin synthesis protein cobW C-terminal domain APS40_RS14385 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS14495 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS14510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS14540 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS14550 SM00382 ATPases associated with a variety of cellular activities APS40_RS14570 SM01133 APS40_RS14570 APS40_RS14590 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS14600 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS14605 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain APS40_RS14650 SM00858 APS40_RS14650 APS40_RS14680 SM00028 Tetratricopeptide repeats APS40_RS14690 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS14720 SM00382 ATPases associated with a variety of cellular activities APS40_RS14730 SM00493 APS40_RS14730 APS40_RS14740 SM00052 Putative diguanylate phosphodiesterase APS40_RS14740 SM00267 diguanylate cyclase APS40_RS14835 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. APS40_RS14880 SM00387 Histidine kinase-like ATPases APS40_RS14910 SM00382 ATPases associated with a variety of cellular activities APS40_RS14935 SM00354 helix_turn _helix lactose operon repressor APS40_RS14940 SM00354 helix_turn _helix lactose operon repressor APS40_RS14980 SM00382 ATPases associated with a variety of cellular activities APS40_RS15005 SM00387 Histidine kinase-like ATPases APS40_RS15005 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS15015 SM00448 cheY-homologous receiver domain APS40_RS15020 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS15040 SM00382 ATPases associated with a variety of cellular activities APS40_RS15045 SM00382 ATPases associated with a variety of cellular activities APS40_RS15075 SM00318 Staphylococcal nuclease homologues APS40_RS15110 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS15115 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain APS40_RS15130 SM00382 ATPases associated with a variety of cellular activities APS40_RS15135 SM00382 ATPases associated with a variety of cellular activities APS40_RS15150 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS15155 SM00387 Histidine kinase-like ATPases APS40_RS15155 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS15160 SM00448 cheY-homologous receiver domain APS40_RS15160 SM00862 Transcriptional regulatory protein, C terminal APS40_RS15185 SM00354 helix_turn _helix lactose operon repressor APS40_RS15190 SM00382 ATPases associated with a variety of cellular activities APS40_RS15220 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS15220 SM00895 APS40_RS15220 APS40_RS15240 SM00382 ATPases associated with a variety of cellular activities APS40_RS15245 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS15270 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS15270 SM00895 APS40_RS15270 APS40_RS15290 SM01130 APS40_RS15290 APS40_RS15295 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS15305 SM00872 Alpha mannosidase, middle domain APS40_RS15325 SM00354 helix_turn _helix lactose operon repressor APS40_RS15360 SM00382 ATPases associated with a variety of cellular activities APS40_RS15370 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS15370 SM00866 APS40_RS15370 APS40_RS15385 SM00861 Transketolase, pyrimidine binding domain APS40_RS15395 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS15410 SM00861 Transketolase, pyrimidine binding domain APS40_RS15415 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS15420 SM00354 helix_turn _helix lactose operon repressor APS40_RS15435 SM00382 ATPases associated with a variety of cellular activities APS40_RS15460 SM00382 ATPases associated with a variety of cellular activities APS40_RS15505 SM00327 von Willebrand factor (vWF) type A domain APS40_RS15560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS15585 SM00341 Helicase and RNase D C-terminal APS40_RS15585 SM00487 DEAD-like helicases superfamily APS40_RS15585 SM00490 helicase superfamily c-terminal domain APS40_RS15585 SM00956 APS40_RS15585 APS40_RS15595 SM00487 DEAD-like helicases superfamily APS40_RS15595 SM00490 helicase superfamily c-terminal domain APS40_RS15595 SM00847 Helicase associated domain (HA2) Add an annotation APS40_RS15605 SM00052 Putative diguanylate phosphodiesterase APS40_RS15605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS15605 SM00091 PAS domain APS40_RS15605 SM00267 diguanylate cyclase APS40_RS15665 SM00382 ATPases associated with a variety of cellular activities APS40_RS15670 SM00382 ATPases associated with a variety of cellular activities APS40_RS15705 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS15710 SM00382 ATPases associated with a variety of cellular activities APS40_RS15805 SM01230 APS40_RS15805 APS40_RS15825 SM00387 Histidine kinase-like ATPases APS40_RS15825 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS15845 SM00382 ATPases associated with a variety of cellular activities APS40_RS15855 SM00448 cheY-homologous receiver domain APS40_RS15855 SM00862 Transcriptional regulatory protein, C terminal APS40_RS15920 SM00382 ATPases associated with a variety of cellular activities APS40_RS15995 SM00290 Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger APS40_RS16000 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS16000 SM00387 Histidine kinase-like ATPases APS40_RS16005 SM00448 cheY-homologous receiver domain APS40_RS16010 SM00028 Tetratricopeptide repeats APS40_RS16010 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APS40_RS16045 SM00354 helix_turn _helix lactose operon repressor APS40_RS16050 SM00812 Alpha-L-fucosidase APS40_RS16095 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS16130 SM00487 DEAD-like helicases superfamily APS40_RS16130 SM00490 helicase superfamily c-terminal domain APS40_RS16160 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS16170 SM00671 Sel1-like repeats. APS40_RS16175 SM00421 helix_turn_helix, Lux Regulon APS40_RS16175 SM00448 cheY-homologous receiver domain APS40_RS16180 SM00387 Histidine kinase-like ATPases APS40_RS16180 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS16180 SM00448 cheY-homologous receiver domain APS40_RS16245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APS40_RS16250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APS40_RS16255 SM00421 helix_turn_helix, Lux Regulon APS40_RS16275 SM00382 ATPases associated with a variety of cellular activities APS40_RS16280 SM00382 ATPases associated with a variety of cellular activities APS40_RS16330 SM00387 Histidine kinase-like ATPases APS40_RS16330 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS16335 SM00448 cheY-homologous receiver domain APS40_RS16335 SM00862 Transcriptional regulatory protein, C terminal APS40_RS16465 SM00849 Metallo-beta-lactamase superfamily APS40_RS16555 SM01130 APS40_RS16555 APS40_RS16590 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS16590 SM00895 APS40_RS16590 APS40_RS16600 SM00382 ATPases associated with a variety of cellular activities APS40_RS16620 SM00450 Rhodanese Homology Domain APS40_RS16650 SM00382 ATPases associated with a variety of cellular activities APS40_RS16700 SM00382 ATPases associated with a variety of cellular activities APS40_RS16705 SM00382 ATPases associated with a variety of cellular activities APS40_RS16715 SM00382 ATPases associated with a variety of cellular activities APS40_RS16720 SM00382 ATPases associated with a variety of cellular activities APS40_RS16745 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS16775 SM00382 ATPases associated with a variety of cellular activities APS40_RS16780 SM00822 APS40_RS16780 APS40_RS16815 SM00460 Transglutaminase/protease-like homologues APS40_RS16825 SM00420 helix_turn_helix, Deoxyribose operon repressor APS40_RS16825 SM01134 APS40_RS16825 APS40_RS16845 SM00822 APS40_RS16845 APS40_RS16850 SM00642 Alpha-amylase domain APS40_RS16870 SM00893 Electron transfer flavoprotein domain APS40_RS16875 SM00893 Electron transfer flavoprotein domain APS40_RS16950 SM00448 cheY-homologous receiver domain APS40_RS16985 SM00091 PAS domain APS40_RS16985 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS17015 SM00642 Alpha-amylase domain APS40_RS17025 SM00883 Chaperonin 10 Kd subunit APS40_RS17045 SM00052 Putative diguanylate phosphodiesterase APS40_RS17055 SM00904 Riboflavin kinase APS40_RS17075 SM00363 S4 RNA-binding domain APS40_RS17090 SM00853 MutL C terminal dimerisation domain APS40_RS17090 SM01340 APS40_RS17090 APS40_RS17100 SM00287 Bacterial SH3 domain homologues APS40_RS17110 SM01209 APS40_RS17110 APS40_RS17110 SM01210 APS40_RS17110 APS40_RS17140 SM00855 Phosphoglycerate mutase family APS40_RS17190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS17205 SM00382 ATPases associated with a variety of cellular activities APS40_RS17210 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS17290 SM00052 Putative diguanylate phosphodiesterase APS40_RS17290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS17290 SM00267 diguanylate cyclase APS40_RS17385 SM00478 endonuclease III APS40_RS17400 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS17430 SM00852 Probable molybdopterin binding domain APS40_RS17450 SM00986 Uracil DNA glycosylase superfamily APS40_RS17450 SM00987 UreE urease accessory protein, C-terminal domain APS40_RS17460 SM00028 Tetratricopeptide repeats APS40_RS17560 SM00382 ATPases associated with a variety of cellular activities APS40_RS17595 SM00382 ATPases associated with a variety of cellular activities APS40_RS17635 SM00382 ATPases associated with a variety of cellular activities APS40_RS17685 SM00710 Parallel beta-helix repeats APS40_RS17690 SM00382 ATPases associated with a variety of cellular activities APS40_RS17705 SM00829 Enoylreductase APS40_RS17800 SM00091 PAS domain APS40_RS17800 SM00387 Histidine kinase-like ATPases APS40_RS17800 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS17845 SM00822 APS40_RS17845 APS40_RS17875 SM00354 helix_turn _helix lactose operon repressor APS40_RS17905 SM00813 Alpha-L-arabinofuranosidase C-terminus APS40_RS17925 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS17925 SM00895 APS40_RS17925 APS40_RS17935 SM00869 Autotransporter beta-domain APS40_RS17940 SM00869 Autotransporter beta-domain APS40_RS17975 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS18025 SM00448 cheY-homologous receiver domain APS40_RS18025 SM00862 Transcriptional regulatory protein, C terminal APS40_RS18030 SM00387 Histidine kinase-like ATPases APS40_RS18030 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS18080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APS40_RS18085 SM00448 cheY-homologous receiver domain APS40_RS18085 SM00862 Transcriptional regulatory protein, C terminal APS40_RS18090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS18090 SM00387 Histidine kinase-like ATPases APS40_RS18090 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS18125 SM00387 Histidine kinase-like ATPases APS40_RS18125 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS18135 SM00382 ATPases associated with a variety of cellular activities APS40_RS18140 SM00382 ATPases associated with a variety of cellular activities APS40_RS18145 SM00382 ATPases associated with a variety of cellular activities APS40_RS18170 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS18180 SM00829 Enoylreductase APS40_RS18230 SM00382 ATPases associated with a variety of cellular activities APS40_RS18250 SM00357 Cold shock protein domain APS40_RS18275 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS18330 SM00387 Histidine kinase-like ATPases APS40_RS18330 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS18335 SM00318 Staphylococcal nuclease homologues APS40_RS18340 SM00344 helix_turn_helix ASNC type APS40_RS18360 SM00822 APS40_RS18360 APS40_RS18365 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS18395 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS18395 SM00091 PAS domain APS40_RS18395 SM00911 HWE histidine kinase APS40_RS18400 SM00448 cheY-homologous receiver domain APS40_RS18465 SM00917 LeuA allosteric (dimerisation) domain APS40_RS18470 SM00257 Lysin motif APS40_RS18475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS18480 SM00382 ATPases associated with a variety of cellular activities APS40_RS18520 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS18535 SM00878 Biotin carboxylase C-terminal domain APS40_RS18555 SM00382 ATPases associated with a variety of cellular activities APS40_RS18625 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS18660 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS18660 SM00866 APS40_RS18660 APS40_RS18695 SM00822 APS40_RS18695 APS40_RS18740 SM00838 Elongation factor G C-terminus APS40_RS18740 SM00889 Elongation factor G, domain IV APS40_RS18745 SM00116 Domain in cystathionine beta-synthase and other proteins. APS40_RS18745 SM01240 APS40_RS18745 APS40_RS18780 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS18790 SM00812 Alpha-L-fucosidase APS40_RS18825 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS18830 SM01091 Transporter associated domain APS40_RS18835 SM00822 APS40_RS18835 APS40_RS18850 SM00382 ATPases associated with a variety of cellular activities APS40_RS18860 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS18885 SM00448 cheY-homologous receiver domain APS40_RS18885 SM00862 Transcriptional regulatory protein, C terminal APS40_RS18890 SM00387 Histidine kinase-like ATPases APS40_RS18890 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS18900 SM01005 Alanine racemase, C-terminal domain APS40_RS18910 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS18960 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APS40_RS18970 SM00822 APS40_RS18970 APS40_RS18980 SM00825 Beta-ketoacyl synthase APS40_RS18995 SM00072 Guanylate kinase homologues. APS40_RS19010 SM00650 Ribosomal RNA adenine dimethylases APS40_RS19065 SM00382 ATPases associated with a variety of cellular activities APS40_RS19080 SM00562 APS40_RS19080 APS40_RS19085 SM00487 DEAD-like helicases superfamily APS40_RS19085 SM00490 helicase superfamily c-terminal domain APS40_RS19105 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS19145 SM00448 cheY-homologous receiver domain APS40_RS19145 SM00862 Transcriptional regulatory protein, C terminal APS40_RS19150 SM00387 Histidine kinase-like ATPases APS40_RS19155 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APS40_RS19180 SM00530 Helix-turn-helix XRE-family like proteins APS40_RS19200 SM00984 UDP binding domain APS40_RS19220 SM00382 ATPases associated with a variety of cellular activities APS40_RS19225 SM00382 ATPases associated with a variety of cellular activities APS40_RS19285 SM00671 Sel1-like repeats. APS40_RS19320 SM00671 Sel1-like repeats. APS40_RS19345 SM00382 ATPases associated with a variety of cellular activities APS40_RS19375 SM00481 DNA polymerase alpha chain like domain APS40_RS19380 SM00382 ATPases associated with a variety of cellular activities APS40_RS19400 SM00354 helix_turn _helix lactose operon repressor APS40_RS19415 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS19435 SM00382 ATPases associated with a variety of cellular activities APS40_RS19450 SM00116 Domain in cystathionine beta-synthase and other proteins. APS40_RS19460 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS19505 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS19505 SM00866 APS40_RS19505 APS40_RS19530 SM00028 Tetratricopeptide repeats APS40_RS19560 SM01130 APS40_RS19560 APS40_RS19575 SM00986 Uracil DNA glycosylase superfamily APS40_RS19575 SM00987 UreE urease accessory protein, C-terminal domain APS40_RS19585 SM01409 APS40_RS19585 APS40_RS19590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APS40_RS19590 SM00954 Region found in RelA / SpoT proteins APS40_RS19610 SM00358 Double-stranded RNA binding motif APS40_RS19610 SM00535 Ribonuclease III family APS40_RS19640 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS19650 SM01004 Delta-aminolevulinic acid dehydratase APS40_RS19675 SM00434 DNA Topoisomerase IV APS40_RS19680 SM00855 Phosphoglycerate mutase family APS40_RS19735 SM00411 bacterial (prokaryotic) histone like domain APS40_RS19740 SM00422 helix_turn_helix, mercury resistance APS40_RS19760 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS19795 SM00100 Cyclic nucleotide-monophosphate binding domain APS40_RS19850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS19880 SM00978 APS40_RS19880 APS40_RS19930 SM00382 ATPases associated with a variety of cellular activities APS40_RS19950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS19955 SM00460 Transglutaminase/protease-like homologues APS40_RS19960 SM00460 Transglutaminase/protease-like homologues APS40_RS19975 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS19985 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS19990 SM00382 ATPases associated with a variety of cellular activities APS40_RS20030 SM00357 Cold shock protein domain APS40_RS20045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS20060 SM00382 ATPases associated with a variety of cellular activities APS40_RS20080 SM00354 helix_turn _helix lactose operon repressor APS40_RS20100 SM00382 ATPases associated with a variety of cellular activities APS40_RS20155 SM00014 Acid phosphatase homologues APS40_RS20165 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS20180 SM00382 ATPases associated with a variety of cellular activities APS40_RS20185 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS20190 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APS40_RS20235 SM00671 Sel1-like repeats. APS40_RS20265 SM00710 Parallel beta-helix repeats APS40_RS20285 SM00984 UDP binding domain APS40_RS20300 SM01259 APS40_RS20300 APS40_RS20310 SM00062 Bacterial periplasmic substrate-binding proteins APS40_RS20350 SM00382 ATPases associated with a variety of cellular activities APS40_RS20355 SM00382 ATPases associated with a variety of cellular activities APS40_RS20375 SM00421 helix_turn_helix, Lux Regulon APS40_RS20400 SM00869 Autotransporter beta-domain APS40_RS20440 SM00671 Sel1-like repeats. APS40_RS20470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APS40_RS20475 SM00836 DALR anticodon binding domain APS40_RS20475 SM01016 Arginyl tRNA synthetase N terminal dom APS40_RS20495 SM00382 ATPases associated with a variety of cellular activities APS40_RS20525 SM00257 Lysin motif APS40_RS20550 SM01323 APS40_RS20550 APS40_RS20610 SM00421 helix_turn_helix, Lux Regulon APS40_RS20625 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APS40_RS20625 SM00091 PAS domain APS40_RS20625 SM00267 diguanylate cyclase APS40_RS20640 SM00434 DNA Topoisomerase IV APS40_RS20745 SM00822 APS40_RS20745 APS40_RS20780 SM00448 cheY-homologous receiver domain APS40_RS20835 SM00487 DEAD-like helicases superfamily APS40_RS20835 SM00490 helicase superfamily c-terminal domain APS40_RS20845 SM00487 DEAD-like helicases superfamily APS40_RS20845 SM00490 helicase superfamily c-terminal domain APS40_RS20845 SM00982 APS40_RS20845 APS40_RS20845 SM01058 CarD-like/TRCF domain APS40_RS20875 SM00829 Enoylreductase APS40_RS21000 SM00796 Allophanate hydrolase subunit 1 APS40_RS21005 SM00797 Allophanate hydrolase subunit 2 APS40_RS21025 SM00116 Domain in cystathionine beta-synthase and other proteins. APS40_RS21025 SM00924 MgtE intracellular N domain APS40_RS21065 SM00382 ATPases associated with a variety of cellular activities APS40_RS21065 SM01086 C-terminal, D2-small domain, of ClpB protein APS40_RS21125 SM00448 cheY-homologous receiver domain APS40_RS21130 SM00267 diguanylate cyclase APS40_RS21130 SM00448 cheY-homologous receiver domain APS40_RS21145 SM00316 Ribosomal protein S1-like RNA-binding domain APS40_RS21145 SM00955 APS40_RS21145 APS40_RS21150 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APS40_RS21150 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APS40_RS21150 SM00493 APS40_RS21150 APS40_RS21160 SM01207 APS40_RS21160 APS40_RS21175 SM00732 Likely ribonuclease with RNase H fold. APS40_RS21220 SM00830 Chorismate mutase type II APS40_RS21230 SM00845 GatB domain APS40_RS21275 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS21315 SM00474 3'-5' exonuclease APS40_RS21325 SM00052 Putative diguanylate phosphodiesterase APS40_RS21330 SM00919 Malic enzyme, NAD binding domain APS40_RS21330 SM01274 APS40_RS21330 APS40_RS21335 SM00886 Stress responsive A/B Barrel Domain APS40_RS21435 SM00382 ATPases associated with a variety of cellular activities APS40_RS21495 SM00345 helix_turn_helix gluconate operon transcriptional repressor APS40_RS21495 SM00895 APS40_RS21495 APS40_RS21515 SM00382 ATPases associated with a variety of cellular activities APS40_RS21530 SM00861 Transketolase, pyrimidine binding domain APS40_RS21535 SM00344 helix_turn_helix ASNC type APS40_RS21605 SM00448 cheY-homologous receiver domain APS40_RS21605 SM00911 HWE histidine kinase APS40_RS21615 SM00138 Methyltransferase, chemotaxis proteins APS40_RS21620 SM00387 Histidine kinase-like ATPases APS40_RS21620 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS21620 SM00448 cheY-homologous receiver domain APS40_RS21690 SM00871 Bacterial transcription activator, effector binding domain APS40_RS21700 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS21710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APS40_RS21720 SM00871 Bacterial transcription activator, effector binding domain APS40_RS21745 SM00878 Biotin carboxylase C-terminal domain APS40_RS21790 SM00646 APS40_RS21790 APS40_RS21820 SM00967 RNA 2'-O ribose methyltransferase substrate binding APS40_RS21855 SM00354 helix_turn _helix lactose operon repressor APS40_RS21865 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APS40_RS21905 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APS40_RS21905 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APS40_RS21910 SM00649 Ribosomal protein L11/L12 APS40_RS21935 SM00663 RNA polymerase I subunit A N-terminus APS40_RS21960 SM00838 Elongation factor G C-terminus APS40_RS21960 SM00889 Elongation factor G, domain IV APS40_RS21970 SM01403 APS40_RS21970 APS40_RS21990 SM01382 APS40_RS21990 APS40_RS21990 SM01383 APS40_RS21990 APS40_RS22005 SM00322 K homology RNA-binding domain APS40_RS22025 SM01374 APS40_RS22025 APS40_RS22030 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APS40_RS22095 SM00662 RNA polymerases D APS40_RS22135 SM01192 APS40_RS22135 APS40_RS22135 SM01193 APS40_RS22135 APS40_RS22155 SM00861 Transketolase, pyrimidine binding domain APS40_RS22200 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS22235 SM00091 PAS domain APS40_RS22235 SM00387 Histidine kinase-like ATPases APS40_RS22235 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS22240 SM00382 ATPases associated with a variety of cellular activities APS40_RS22240 SM00448 cheY-homologous receiver domain APS40_RS22245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APS40_RS22245 SM00387 Histidine kinase-like ATPases APS40_RS22245 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS22250 SM00382 ATPases associated with a variety of cellular activities APS40_RS22250 SM00448 cheY-homologous receiver domain APS40_RS22280 SM00849 Metallo-beta-lactamase superfamily APS40_RS22305 SM00936 Penicillin-binding protein 5, C-terminal domain APS40_RS22320 SM01018 B12 binding domain APS40_RS22340 SM00422 helix_turn_helix, mercury resistance APS40_RS22375 SM00729 Elongator protein 3, MiaB family, Radical SAM APS40_RS22385 SM00905 Dihydroneopterin aldolase APS40_RS22415 SM00363 S4 RNA-binding domain APS40_RS22425 SM00244 prohibitin homologues APS40_RS22435 SM00382 ATPases associated with a variety of cellular activities APS40_RS22440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APS40_RS22455 SM00421 helix_turn_helix, Lux Regulon APS40_RS22525 SM00852 Probable molybdopterin binding domain APS40_RS22565 SM00448 cheY-homologous receiver domain APS40_RS22565 SM00862 Transcriptional regulatory protein, C terminal APS40_RS22570 SM00387 Histidine kinase-like ATPases APS40_RS22570 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS22575 SM00420 helix_turn_helix, Deoxyribose operon repressor APS40_RS22575 SM01134 APS40_RS22575 APS40_RS22655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APS40_RS22690 SM00481 DNA polymerase alpha chain like domain APS40_RS22705 SM00382 ATPases associated with a variety of cellular activities APS40_RS22735 SM00849 Metallo-beta-lactamase superfamily APS40_RS22780 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APS40_RS22785 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APS40_RS22835 SM00411 bacterial (prokaryotic) histone like domain APS40_RS22850 SM00382 ATPases associated with a variety of cellular activities APS40_RS22850 SM00464 Found in ATP-dependent protease La (LON) APS40_RS22880 SM00382 ATPases associated with a variety of cellular activities APS40_RS22880 SM00994 ClpX C4-type zinc finger APS40_RS22880 SM01086 C-terminal, D2-small domain, of ClpB protein APS40_RS22890 SM00966 SpoVT / AbrB like domain APS40_RS22935 SM00938 Nitrogen regulatory protein P-II APS40_RS22940 SM01230 APS40_RS22940 APS40_RS22965 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS22985 SM00382 ATPases associated with a variety of cellular activities APS40_RS23000 SM00387 Histidine kinase-like ATPases APS40_RS23000 SM00433 TopoisomeraseII APS40_RS23005 SM00487 DEAD-like helicases superfamily APS40_RS23005 SM00490 helicase superfamily c-terminal domain APS40_RS23010 SM00267 diguanylate cyclase APS40_RS23040 SM00382 ATPases associated with a variety of cellular activities APS40_RS23100 SM00861 Transketolase, pyrimidine binding domain APS40_RS23105 SM00421 helix_turn_helix, Lux Regulon APS40_RS23110 SM00937 APS40_RS23110 APS40_RS23155 SM00028 Tetratricopeptide repeats APS40_RS23175 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APS40_RS23185 SM01234 APS40_RS23185 APS40_RS23200 SM00342 helix_turn_helix, arabinose operon control protein APS40_RS23200 SM00871 Bacterial transcription activator, effector binding domain APS40_RS23250 SM00971 Serine acetyltransferase, N-terminal APS40_RS23275 SM01350 APS40_RS23275 APS40_RS23325 SM00422 helix_turn_helix, mercury resistance APS40_RS23345 SM00028 Tetratricopeptide repeats APS40_RS23375 SM00852 Probable molybdopterin binding domain APS40_RS23405 SM00998 Adenylosuccinate lyase C-terminus APS40_RS23445 SM01211 APS40_RS23445 APS40_RS23460 SM00880 APS40_RS23460 APS40_RS23465 SM01118 APS40_RS23465 APS40_RS23510 SM00886 Stress responsive A/B Barrel Domain APS40_RS23560 SM00363 S4 RNA-binding domain APS40_RS23560 SM01390 APS40_RS23560 APS40_RS23575 SM00267 diguanylate cyclase APS40_RS23605 SM00825 Beta-ketoacyl synthase APS40_RS23610 SM00347 helix_turn_helix multiple antibiotic resistance protein APS40_RS23615 SM01329 APS40_RS23615 APS40_RS23645 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APS40_RS23650 SM00382 ATPases associated with a variety of cellular activities APS40_RS23665 SM00382 ATPases associated with a variety of cellular activities APS40_RS23690 SM00091 PAS domain APS40_RS23690 SM00387 Histidine kinase-like ATPases APS40_RS23690 SM00388 His Kinase A (phosphoacceptor) domain APS40_RS23690 SM00448 cheY-homologous receiver domain APS40_RS23770 SM00858 APS40_RS23770 APS40_RS23790 SM00382 ATPases associated with a variety of cellular activities APS40_RS23805 SM00382 ATPases associated with a variety of cellular activities APS40_RS23945 SM00382 ATPases associated with a variety of cellular activities APS40_RS24020 SM00287 Bacterial SH3 domain homologues APS40_RS24160 SM00344 helix_turn_helix ASNC type APS40_RS24190 SM00917 LeuA allosteric (dimerisation) domain APS40_RS24265 SM00869 Autotransporter beta-domain APS40_RS24295 SM00354 helix_turn _helix lactose operon repressor