DDI_RS00005 SM00382 ATPases associated with a variety of cellular activities DDI_RS00020 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS00030 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS00095 SM00878 Biotin carboxylase C-terminal domain DDI_RS00120 SM00829 Enoylreductase DDI_RS00125 SM00052 Putative diguanylate phosphodiesterase DDI_RS00125 SM00267 diguanylate cyclase DDI_RS00150 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS00235 SM00382 ATPases associated with a variety of cellular activities DDI_RS00265 SM00382 ATPases associated with a variety of cellular activities DDI_RS00300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDI_RS00305 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDI_RS00360 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS00365 SM00073 Histidine Phosphotransfer domain DDI_RS00365 SM00091 PAS domain DDI_RS00365 SM00387 Histidine kinase-like ATPases DDI_RS00365 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS00365 SM00448 cheY-homologous receiver domain DDI_RS00385 SM00749 bacterial OsmY and nodulation domain DDI_RS00455 SM00387 Histidine kinase-like ATPases DDI_RS00455 SM00433 TopoisomeraseII DDI_RS00470 SM00434 DNA Topoisomerase IV DDI_RS00475 SM00563 Phosphate acyltransferases DDI_RS00495 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS00540 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS00550 SM01007 Class II Aldolase and Adducin N-terminal domain DDI_RS00555 SM00354 helix_turn _helix lactose operon repressor DDI_RS00560 SM00640 Glycosyl hydrolases family 32 DDI_RS00585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS00585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS00625 SM00382 ATPases associated with a variety of cellular activities DDI_RS00650 SM00460 Transglutaminase/protease-like homologues DDI_RS00810 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS00830 SM00493 DDI_RS00830 DDI_RS00830 SM00778 Zinc-binding domain of primase-helicase DDI_RS00860 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS00880 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS00975 SM00420 helix_turn_helix, Deoxyribose operon repressor DDI_RS00975 SM01134 DDI_RS00975 DDI_RS00985 SM00861 Transketolase, pyrimidine binding domain DDI_RS01005 SM00382 ATPases associated with a variety of cellular activities DDI_RS01055 SM00382 ATPases associated with a variety of cellular activities DDI_RS01060 SM00382 ATPases associated with a variety of cellular activities DDI_RS01105 SM00344 helix_turn_helix ASNC type DDI_RS01110 SM00830 Chorismate mutase type II DDI_RS01120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS01125 SM00346 helix_turn_helix isocitrate lyase regulation DDI_RS01130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS01135 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS01140 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS01155 SM00382 ATPases associated with a variety of cellular activities DDI_RS01195 SM01011 Aminopeptidase P, N-terminal domain DDI_RS01220 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS01225 SM00382 ATPases associated with a variety of cellular activities DDI_RS01250 SM00749 bacterial OsmY and nodulation domain DDI_RS01270 SM00822 DDI_RS01270 DDI_RS01275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS01275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS01275 SM00319 Homologues of the ligand binding domain of Tar DDI_RS01290 SM00382 ATPases associated with a variety of cellular activities DDI_RS01355 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS01355 SM00895 DDI_RS01355 DDI_RS01400 SM00382 ATPases associated with a variety of cellular activities DDI_RS01425 SM00422 helix_turn_helix, mercury resistance DDI_RS01430 SM00354 helix_turn _helix lactose operon repressor DDI_RS01440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS01555 SM00883 Chaperonin 10 Kd subunit DDI_RS01575 SM00563 Phosphate acyltransferases DDI_RS01640 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS01640 SM00895 DDI_RS01640 DDI_RS01675 SM00858 DDI_RS01675 DDI_RS01700 SM00656 DDI_RS01700 DDI_RS01705 SM00421 helix_turn_helix, Lux Regulon DDI_RS01705 SM00448 cheY-homologous receiver domain DDI_RS01710 SM00387 Histidine kinase-like ATPases DDI_RS01740 SM00900 DDI_RS01740 DDI_RS02020 SM00400 zinc finger DDI_RS02020 SM00493 DDI_RS02020 DDI_RS02020 SM00766 DNA primase DnaG DnaB-binding DDI_RS02095 SM01103 DDI_RS02095 DDI_RS02105 SM00382 ATPases associated with a variety of cellular activities DDI_RS02140 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS02160 SM01387 DDI_RS02160 DDI_RS02165 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS02165 SM00322 K homology RNA-binding domain DDI_RS02170 SM00028 Tetratricopeptide repeats DDI_RS02175 SM00487 DEAD-like helicases superfamily DDI_RS02175 SM00490 helicase superfamily c-terminal domain DDI_RS02210 SM01133 DDI_RS02210 DDI_RS02215 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DDI_RS02270 SM00487 DEAD-like helicases superfamily DDI_RS02350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS02425 SM00857 Resolvase, N terminal domain DDI_RS02495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS02495 SM00387 Histidine kinase-like ATPases DDI_RS02495 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS02500 SM00448 cheY-homologous receiver domain DDI_RS02500 SM00862 Transcriptional regulatory protein, C terminal DDI_RS02550 SM00382 ATPases associated with a variety of cellular activities DDI_RS02620 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS02640 SM00382 ATPases associated with a variety of cellular activities DDI_RS02645 SM00382 ATPases associated with a variety of cellular activities DDI_RS02660 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS02680 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS02685 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS02700 SM00890 Domain of unknown function DDI_RS02780 SM00382 ATPases associated with a variety of cellular activities DDI_RS02825 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS02865 SM00778 Zinc-binding domain of primase-helicase DDI_RS02865 SM00885 D5 N terminal like DDI_RS02960 SM00919 Malic enzyme, NAD binding domain DDI_RS02960 SM01274 DDI_RS02960 DDI_RS02995 SM00421 helix_turn_helix, Lux Regulon DDI_RS03015 SM00382 ATPases associated with a variety of cellular activities DDI_RS03025 SM00448 cheY-homologous receiver domain DDI_RS03025 SM00862 Transcriptional regulatory protein, C terminal DDI_RS03030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS03030 SM00387 Histidine kinase-like ATPases DDI_RS03030 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS03075 SM00771 ZipA, C-terminal domain (FtsZ-binding) DDI_RS03105 SM00849 Metallo-beta-lactamase superfamily DDI_RS03110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS03110 SM00382 ATPases associated with a variety of cellular activities DDI_RS03145 SM00900 DDI_RS03145 DDI_RS03180 SM00354 helix_turn _helix lactose operon repressor DDI_RS03190 SM00382 ATPases associated with a variety of cellular activities DDI_RS03215 SM01329 DDI_RS03215 DDI_RS03235 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS03270 SM00448 cheY-homologous receiver domain DDI_RS03270 SM00862 Transcriptional regulatory protein, C terminal DDI_RS03275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS03275 SM00387 Histidine kinase-like ATPases DDI_RS03275 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS03365 SM00822 DDI_RS03365 DDI_RS03380 SM00829 Enoylreductase DDI_RS03430 SM00487 DEAD-like helicases superfamily DDI_RS03440 SM00506 Appr-1"-p processing enzyme DDI_RS03515 SM00478 endonuclease III DDI_RS03515 SM00525 DDI_RS03515 DDI_RS03535 SM00869 Autotransporter beta-domain DDI_RS03555 SM00927 DNA mismatch repair enzyme MutH DDI_RS03570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS03615 SM00646 DDI_RS03615 DDI_RS03630 SM00925 MltA specific insert domain DDI_RS03675 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DDI_RS03675 SM00475 5'-3' exonuclease DDI_RS03715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS03760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDI_RS03770 SM00935 Outer membrane protein (OmpH-like) DDI_RS03800 SM00481 DNA polymerase alpha chain like domain DDI_RS03815 SM00977 TilS substrate C-terminal domain DDI_RS03830 SM01322 DDI_RS03830 DDI_RS03840 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DDI_RS03840 SM00534 ATPase domain of DNA mismatch repair MUTS family DDI_RS03860 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS03875 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS03930 SM00450 Rhodanese Homology Domain DDI_RS03965 SM00267 diguanylate cyclase DDI_RS03980 SM00331 Sigma factor PP2C-like phosphatases DDI_RS04035 SM00870 DDI_RS04035 DDI_RS04055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS04055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS04080 SM00448 cheY-homologous receiver domain DDI_RS04080 SM00862 Transcriptional regulatory protein, C terminal DDI_RS04085 SM00091 PAS domain DDI_RS04085 SM00387 Histidine kinase-like ATPases DDI_RS04085 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS04130 SM01323 DDI_RS04130 DDI_RS04150 SM00831 Cation transporter/ATPase, N-terminus DDI_RS04185 SM00861 Transketolase, pyrimidine binding domain DDI_RS04200 SM00981 DDI_RS04200 DDI_RS04285 SM00382 ATPases associated with a variety of cellular activities DDI_RS04285 SM00994 ClpX C4-type zinc finger DDI_RS04285 SM01086 C-terminal, D2-small domain, of ClpB protein DDI_RS04290 SM00382 ATPases associated with a variety of cellular activities DDI_RS04290 SM00464 Found in ATP-dependent protease La (LON) DDI_RS04295 SM00411 bacterial (prokaryotic) histone like domain DDI_RS04320 SM00344 helix_turn_helix ASNC type DDI_RS04325 SM00382 ATPases associated with a variety of cellular activities DDI_RS04330 SM00382 ATPases associated with a variety of cellular activities DDI_RS04335 SM00938 Nitrogen regulatory protein P-II DDI_RS04425 SM00382 ATPases associated with a variety of cellular activities DDI_RS04435 SM00493 DDI_RS04435 DDI_RS04440 SM00387 Histidine kinase-like ATPases DDI_RS04475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS04475 SM01049 DDI_RS04475 DDI_RS04480 SM00710 Parallel beta-helix repeats DDI_RS04500 SM00422 helix_turn_helix, mercury resistance DDI_RS04510 SM00244 prohibitin homologues DDI_RS04535 SM00434 DNA Topoisomerase IV DDI_RS04540 SM00387 Histidine kinase-like ATPases DDI_RS04540 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS04540 SM00448 cheY-homologous receiver domain DDI_RS04545 SM00421 helix_turn_helix, Lux Regulon DDI_RS04545 SM00448 cheY-homologous receiver domain DDI_RS04550 SM00387 Histidine kinase-like ATPases DDI_RS04550 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS04580 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS04595 SM00852 Probable molybdopterin binding domain DDI_RS04620 SM00822 DDI_RS04620 DDI_RS04630 SM00382 ATPases associated with a variety of cellular activities DDI_RS04655 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS04655 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DDI_RS04665 SM00382 ATPases associated with a variety of cellular activities DDI_RS04680 SM00354 helix_turn _helix lactose operon repressor DDI_RS04730 SM01130 DDI_RS04730 DDI_RS04780 SM00357 Cold shock protein domain DDI_RS04800 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS04815 SM00936 Penicillin-binding protein 5, C-terminal domain DDI_RS04870 SM00382 ATPases associated with a variety of cellular activities DDI_RS04885 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS04895 SM00116 Domain in cystathionine beta-synthase and other proteins. DDI_RS04895 SM01091 Transporter associated domain DDI_RS04910 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS04995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS04995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS05025 SM00448 cheY-homologous receiver domain DDI_RS05025 SM00862 Transcriptional regulatory protein, C terminal DDI_RS05030 SM00387 Histidine kinase-like ATPases DDI_RS05030 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS05075 SM00796 Allophanate hydrolase subunit 1 DDI_RS05080 SM00797 Allophanate hydrolase subunit 2 DDI_RS05115 SM00861 Transketolase, pyrimidine binding domain DDI_RS05130 SM00881 CoA binding domain DDI_RS05230 SM00855 Phosphoglycerate mutase family DDI_RS05260 SM00382 ATPases associated with a variety of cellular activities DDI_RS05285 SM00382 ATPases associated with a variety of cellular activities DDI_RS05350 SM01091 Transporter associated domain DDI_RS05365 SM00226 Low molecular weight phosphatase family DDI_RS05440 SM00984 UDP binding domain DDI_RS05455 SM01350 DDI_RS05455 DDI_RS05480 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS05480 SM00895 DDI_RS05480 DDI_RS05510 SM00421 helix_turn_helix, Lux Regulon DDI_RS05525 SM00382 ATPases associated with a variety of cellular activities DDI_RS05530 SM00382 ATPases associated with a variety of cellular activities DDI_RS05545 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS05545 SM00895 DDI_RS05545 DDI_RS05560 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS05645 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS05655 SM00344 helix_turn_helix ASNC type DDI_RS05670 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS05695 SM00382 ATPases associated with a variety of cellular activities DDI_RS05705 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDI_RS05775 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS05780 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS05795 SM01038 Beta galactosidase small chain DDI_RS05800 SM00354 helix_turn _helix lactose operon repressor DDI_RS05830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS05830 SM00382 ATPases associated with a variety of cellular activities DDI_RS05845 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDI_RS05950 SM00382 ATPases associated with a variety of cellular activities DDI_RS06000 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS06000 SM00866 DDI_RS06000 DDI_RS06025 SM00382 ATPases associated with a variety of cellular activities DDI_RS06030 SM00382 ATPases associated with a variety of cellular activities DDI_RS06040 SM00072 Guanylate kinase homologues. DDI_RS06045 SM00849 Metallo-beta-lactamase superfamily DDI_RS06055 SM00382 ATPases associated with a variety of cellular activities DDI_RS06105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS06105 SM00487 DEAD-like helicases superfamily DDI_RS06170 SM00382 ATPases associated with a variety of cellular activities DDI_RS06200 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS06215 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDI_RS06235 SM00354 helix_turn _helix lactose operon repressor DDI_RS06255 SM01068 Putative carbohydrate binding domain DDI_RS06270 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS06275 SM00829 Enoylreductase DDI_RS06305 SM00267 diguanylate cyclase DDI_RS06370 SM00382 ATPases associated with a variety of cellular activities DDI_RS06390 SM00382 ATPases associated with a variety of cellular activities DDI_RS06445 SM00382 ATPases associated with a variety of cellular activities DDI_RS06455 SM00260 Two component signalling adaptor domain DDI_RS06455 SM00448 cheY-homologous receiver domain DDI_RS06495 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DDI_RS06515 SM00382 ATPases associated with a variety of cellular activities DDI_RS06545 SM00825 Beta-ketoacyl synthase DDI_RS06630 SM00382 ATPases associated with a variety of cellular activities DDI_RS06630 SM01086 C-terminal, D2-small domain, of ClpB protein DDI_RS06635 SM00382 ATPases associated with a variety of cellular activities DDI_RS06660 SM00671 Sel1-like repeats. DDI_RS06670 SM00267 diguanylate cyclase DDI_RS06715 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS06760 SM00382 ATPases associated with a variety of cellular activities DDI_RS06765 SM00382 ATPases associated with a variety of cellular activities DDI_RS06770 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS06785 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS06980 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS06985 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS06995 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS07030 SM00860 SMI1 / KNR4 family DDI_RS07090 SM00028 Tetratricopeptide repeats DDI_RS07105 SM00852 Probable molybdopterin binding domain DDI_RS07110 SM00919 Malic enzyme, NAD binding domain DDI_RS07110 SM01274 DDI_RS07110 DDI_RS07140 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS07140 SM00876 Biotin and Thiamin Synthesis associated domain DDI_RS07160 SM00487 DEAD-like helicases superfamily DDI_RS07160 SM00490 helicase superfamily c-terminal domain DDI_RS07170 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS07175 SM00852 Probable molybdopterin binding domain DDI_RS07205 SM00382 ATPases associated with a variety of cellular activities DDI_RS07215 SM00155 Phospholipase D. Active site motifs. DDI_RS07235 SM00382 ATPases associated with a variety of cellular activities DDI_RS07245 SM00487 DEAD-like helicases superfamily DDI_RS07245 SM00490 helicase superfamily c-terminal domain DDI_RS07255 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS07265 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS07285 SM01118 DDI_RS07285 DDI_RS07305 SM00420 helix_turn_helix, Deoxyribose operon repressor DDI_RS07305 SM01134 DDI_RS07305 DDI_RS07315 SM01217 DDI_RS07315 DDI_RS07325 SM00487 DEAD-like helicases superfamily DDI_RS07325 SM00491 DDI_RS07325 DDI_RS07340 SM00014 Acid phosphatase homologues DDI_RS07345 SM00060 Fibronectin type 3 domain DDI_RS07360 SM00382 ATPases associated with a variety of cellular activities DDI_RS07370 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS07370 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DDI_RS07390 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS07415 SM00878 Biotin carboxylase C-terminal domain DDI_RS07420 SM00796 Allophanate hydrolase subunit 1 DDI_RS07425 SM00797 Allophanate hydrolase subunit 2 DDI_RS07445 SM00382 ATPases associated with a variety of cellular activities DDI_RS07495 SM00382 ATPases associated with a variety of cellular activities DDI_RS07500 SM00382 ATPases associated with a variety of cellular activities DDI_RS07520 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS07590 SM00901 DDI_RS07590 DDI_RS07600 SM00778 Zinc-binding domain of primase-helicase DDI_RS07645 SM00387 Histidine kinase-like ATPases DDI_RS07650 SM00448 cheY-homologous receiver domain DDI_RS07650 SM00850 LytTr DNA-binding domain DDI_RS07665 SM00487 DEAD-like helicases superfamily DDI_RS07665 SM00490 helicase superfamily c-terminal domain DDI_RS07675 SM00363 S4 RNA-binding domain DDI_RS07695 SM00382 ATPases associated with a variety of cellular activities DDI_RS07725 SM00841 Elongation factor P, C-terminal DDI_RS07725 SM01185 DDI_RS07725 DDI_RS07755 SM00518 AP endonuclease family 2 DDI_RS07810 SM00382 ATPases associated with a variety of cellular activities DDI_RS07835 SM00829 Enoylreductase DDI_RS07850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS07850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS07855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS07860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS07860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS07865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS07870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS07890 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS07910 SM00382 ATPases associated with a variety of cellular activities DDI_RS07910 SM00930 DDI_RS07910 DDI_RS07925 SM00936 Penicillin-binding protein 5, C-terminal domain DDI_RS07930 SM00420 helix_turn_helix, Deoxyribose operon repressor DDI_RS07930 SM01134 DDI_RS07930 DDI_RS07975 SM00382 ATPases associated with a variety of cellular activities DDI_RS08005 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS08005 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DDI_RS08020 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS08020 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DDI_RS08025 SM00382 ATPases associated with a variety of cellular activities DDI_RS08030 SM00644 DDI_RS08030 DDI_RS08055 SM00357 Cold shock protein domain DDI_RS08065 SM00382 ATPases associated with a variety of cellular activities DDI_RS08065 SM01086 C-terminal, D2-small domain, of ClpB protein DDI_RS08070 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS08085 SM00382 ATPases associated with a variety of cellular activities DDI_RS08090 SM00382 ATPases associated with a variety of cellular activities DDI_RS08100 SM00344 helix_turn_helix ASNC type DDI_RS08105 SM00843 DDI_RS08105 DDI_RS08115 SM00382 ATPases associated with a variety of cellular activities DDI_RS08135 SM00849 Metallo-beta-lactamase superfamily DDI_RS08190 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS08195 SM00411 bacterial (prokaryotic) histone like domain DDI_RS08255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS08255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS08255 SM01358 DDI_RS08255 DDI_RS08260 SM00448 cheY-homologous receiver domain DDI_RS08265 SM00091 PAS domain DDI_RS08265 SM00387 Histidine kinase-like ATPases DDI_RS08280 SM00764 Citrate lyase ligase C-terminal domain DDI_RS08325 SM00479 DDI_RS08325 DDI_RS08340 SM00849 Metallo-beta-lactamase superfamily DDI_RS08345 SM00382 ATPases associated with a variety of cellular activities DDI_RS08445 SM00420 helix_turn_helix, Deoxyribose operon repressor DDI_RS08445 SM01134 DDI_RS08445 DDI_RS08480 SM00481 DNA polymerase alpha chain like domain DDI_RS08605 SM00382 ATPases associated with a variety of cellular activities DDI_RS08620 SM00836 DALR anticodon binding domain DDI_RS08620 SM01016 Arginyl tRNA synthetase N terminal dom DDI_RS08690 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDI_RS08695 SM00382 ATPases associated with a variety of cellular activities DDI_RS08705 SM00382 ATPases associated with a variety of cellular activities DDI_RS08715 SM00257 Lysin motif DDI_RS08790 SM00477 DNA/RNA non-specific endonuclease DDI_RS08790 SM00892 DNA/RNA non-specific endonuclease DDI_RS08795 SM00448 cheY-homologous receiver domain DDI_RS08800 SM00448 cheY-homologous receiver domain DDI_RS08805 SM00387 Histidine kinase-like ATPases DDI_RS08810 SM00897 FIST N domain DDI_RS08810 SM01204 DDI_RS08810 DDI_RS08895 SM00763 PrkA AAA domain DDI_RS08915 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DDI_RS08935 SM00870 DDI_RS08935 DDI_RS08950 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DDI_RS08950 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DDI_RS08950 SM00493 DDI_RS08950 DDI_RS08990 SM00448 cheY-homologous receiver domain DDI_RS09000 SM00528 Domain in histone-like proteins of HNS family DDI_RS09040 SM00382 ATPases associated with a variety of cellular activities DDI_RS09045 SM00382 ATPases associated with a variety of cellular activities DDI_RS09055 SM00155 Phospholipase D. Active site motifs. DDI_RS09065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS09065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS09065 SM00319 Homologues of the ligand binding domain of Tar DDI_RS09140 SM00481 DNA polymerase alpha chain like domain DDI_RS09150 SM00363 S4 RNA-binding domain DDI_RS09160 SM00822 DDI_RS09160 DDI_RS09185 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DDI_RS09185 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DDI_RS09185 SM00493 DDI_RS09185 DDI_RS09195 SM00478 endonuclease III DDI_RS09195 SM00525 DDI_RS09195 DDI_RS09205 SM00900 DDI_RS09205 DDI_RS09250 SM00382 ATPases associated with a variety of cellular activities DDI_RS09260 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS09350 SM00953 DDI_RS09350 DDI_RS09400 SM00235 Zinc-dependent metalloprotease DDI_RS09405 SM00235 Zinc-dependent metalloprotease DDI_RS09420 SM00382 ATPases associated with a variety of cellular activities DDI_RS09490 SM00382 ATPases associated with a variety of cellular activities DDI_RS09540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS09540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS09540 SM01358 DDI_RS09540 DDI_RS09560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS09560 SM00897 FIST N domain DDI_RS09560 SM01204 DDI_RS09560 DDI_RS09570 SM00100 Cyclic nucleotide-monophosphate binding domain DDI_RS09570 SM00419 helix_turn_helix, cAMP Regulatory protein DDI_RS09585 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DDI_RS09585 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DDI_RS09610 SM00937 DDI_RS09610 DDI_RS09630 SM01400 DDI_RS09630 DDI_RS09665 SM00640 Glycosyl hydrolases family 32 DDI_RS09675 SM00354 helix_turn _helix lactose operon repressor DDI_RS09680 SM00487 DEAD-like helicases superfamily DDI_RS09680 SM00490 helicase superfamily c-terminal domain DDI_RS09760 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS09800 SM00341 Helicase and RNase D C-terminal DDI_RS09800 SM00474 3'-5' exonuclease DDI_RS09820 SM00487 DEAD-like helicases superfamily DDI_RS09820 SM00488 DDI_RS09820 DDI_RS09820 SM00491 DDI_RS09820 DDI_RS09850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS09855 SM01091 Transporter associated domain DDI_RS09890 SM00357 Cold shock protein domain DDI_RS09940 SM00382 ATPases associated with a variety of cellular activities DDI_RS09990 SM00411 bacterial (prokaryotic) histone like domain DDI_RS09995 SM00873 B3/4 domain DDI_RS09995 SM00874 tRNA synthetase B5 domain DDI_RS09995 SM00896 Ferredoxin-fold anticodon binding domain DDI_RS10020 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DDI_RS10030 SM00346 helix_turn_helix isocitrate lyase regulation DDI_RS10045 SM00052 Putative diguanylate phosphodiesterase DDI_RS10045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS10045 SM00091 PAS domain DDI_RS10045 SM00267 diguanylate cyclase DDI_RS10050 SM01329 DDI_RS10050 DDI_RS10080 SM00448 cheY-homologous receiver domain DDI_RS10080 SM00862 Transcriptional regulatory protein, C terminal DDI_RS10085 SM00387 Histidine kinase-like ATPases DDI_RS10090 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DDI_RS10110 SM00899 DDI_RS10110 DDI_RS10115 SM00899 DDI_RS10115 DDI_RS10145 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS10190 SM00400 zinc finger DDI_RS10195 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS10225 SM00912 haemagglutination activity domain DDI_RS10315 SM00382 ATPases associated with a variety of cellular activities DDI_RS10320 SM00421 helix_turn_helix, Lux Regulon DDI_RS10320 SM00448 cheY-homologous receiver domain DDI_RS10325 SM00091 PAS domain DDI_RS10325 SM00387 Histidine kinase-like ATPases DDI_RS10350 SM00382 ATPases associated with a variety of cellular activities DDI_RS10395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS10395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS10395 SM01358 DDI_RS10395 DDI_RS10400 SM01130 DDI_RS10400 DDI_RS10425 SM00382 ATPases associated with a variety of cellular activities DDI_RS10455 SM00420 helix_turn_helix, Deoxyribose operon repressor DDI_RS10455 SM01134 DDI_RS10455 DDI_RS10485 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS10490 SM00382 ATPases associated with a variety of cellular activities DDI_RS10520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS10570 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDI_RS10580 SM00849 Metallo-beta-lactamase superfamily DDI_RS10590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS10590 SM00387 Histidine kinase-like ATPases DDI_RS10595 SM00421 helix_turn_helix, Lux Regulon DDI_RS10595 SM00448 cheY-homologous receiver domain DDI_RS10610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDI_RS10610 SM00245 tail specific protease DDI_RS10615 SM00945 ProQ/FINO family DDI_RS10620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS10645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS10645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS10645 SM01358 DDI_RS10645 DDI_RS10720 SM00463 Small MutS-related domain DDI_RS10740 SM00857 Resolvase, N terminal domain DDI_RS10800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS10800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DDI_RS10800 SM00091 PAS domain DDI_RS10800 SM00267 diguanylate cyclase DDI_RS10805 SM00091 PAS domain DDI_RS10805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS10825 SM00382 ATPases associated with a variety of cellular activities DDI_RS10830 SM00382 ATPases associated with a variety of cellular activities DDI_RS10865 SM00448 cheY-homologous receiver domain DDI_RS10865 SM00862 Transcriptional regulatory protein, C terminal DDI_RS10870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS10870 SM00387 Histidine kinase-like ATPases DDI_RS10870 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS10905 SM00382 ATPases associated with a variety of cellular activities DDI_RS10905 SM00487 DEAD-like helicases superfamily DDI_RS10905 SM00490 helicase superfamily c-terminal domain DDI_RS10905 SM00847 Helicase associated domain (HA2) Add an annotation DDI_RS10925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DDI_RS10925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS10990 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS11015 SM00091 PAS domain DDI_RS11015 SM00382 ATPases associated with a variety of cellular activities DDI_RS11055 SM00382 ATPases associated with a variety of cellular activities DDI_RS11075 SM00382 ATPases associated with a variety of cellular activities DDI_RS11080 SM00382 ATPases associated with a variety of cellular activities DDI_RS11100 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS11100 SM00357 Cold shock protein domain DDI_RS11100 SM00955 DDI_RS11100 DDI_RS11120 SM01007 Class II Aldolase and Adducin N-terminal domain DDI_RS11135 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DDI_RS11140 SM00028 Tetratricopeptide repeats DDI_RS11150 SM00014 Acid phosphatase homologues DDI_RS11180 SM00363 S4 RNA-binding domain DDI_RS11205 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS11220 SM00479 DDI_RS11220 DDI_RS11240 SM00354 helix_turn _helix lactose operon repressor DDI_RS11265 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS11305 SM00507 HNH nucleases DDI_RS11335 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS11365 SM01061 CAT RNA binding domain DDI_RS11400 SM00382 ATPases associated with a variety of cellular activities DDI_RS11470 SM00382 ATPases associated with a variety of cellular activities DDI_RS11475 SM00981 DDI_RS11475 DDI_RS11500 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS11515 SM00382 ATPases associated with a variety of cellular activities DDI_RS11555 SM00849 Metallo-beta-lactamase superfamily DDI_RS11575 SM00052 Putative diguanylate phosphodiesterase DDI_RS11590 SM00382 ATPases associated with a variety of cellular activities DDI_RS11620 SM00382 ATPases associated with a variety of cellular activities DDI_RS11630 SM00487 DEAD-like helicases superfamily DDI_RS11630 SM00490 helicase superfamily c-terminal domain DDI_RS11630 SM00982 DDI_RS11630 DDI_RS11630 SM01058 CarD-like/TRCF domain DDI_RS11635 SM00052 Putative diguanylate phosphodiesterase DDI_RS11665 SM00354 helix_turn _helix lactose operon repressor DDI_RS11745 SM00825 Beta-ketoacyl synthase DDI_RS11755 SM00822 DDI_RS11755 DDI_RS11760 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DDI_RS11790 SM00363 S4 RNA-binding domain DDI_RS11795 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS11825 SM00867 YceI-like domain DDI_RS11830 SM00450 Rhodanese Homology Domain DDI_RS11865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS11865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS11905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS12005 SM00382 ATPases associated with a variety of cellular activities DDI_RS12065 SM00047 Lysozyme subfamily 2 DDI_RS12110 SM00858 DDI_RS12110 DDI_RS12145 SM00448 cheY-homologous receiver domain DDI_RS12150 SM00448 cheY-homologous receiver domain DDI_RS12155 SM00138 Methyltransferase, chemotaxis proteins DDI_RS12160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS12160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS12160 SM00319 Homologues of the ligand binding domain of Tar DDI_RS12165 SM00260 Two component signalling adaptor domain DDI_RS12170 SM00073 Histidine Phosphotransfer domain DDI_RS12170 SM00260 Two component signalling adaptor domain DDI_RS12170 SM00387 Histidine kinase-like ATPases DDI_RS12170 SM01231 DDI_RS12170 DDI_RS12200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS12200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS12220 SM00495 Chitin-binding domain type 3 DDI_RS12225 SM00710 Parallel beta-helix repeats DDI_RS12270 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DDI_RS12275 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DDI_RS12290 SM00822 DDI_RS12290 DDI_RS12290 SM00823 Phosphopantetheine attachment site DDI_RS12290 SM00825 Beta-ketoacyl synthase DDI_RS12290 SM01294 DDI_RS12290 DDI_RS12295 SM00822 DDI_RS12295 DDI_RS12295 SM00823 Phosphopantetheine attachment site DDI_RS12295 SM00825 Beta-ketoacyl synthase DDI_RS12295 SM00826 DDI_RS12295 DDI_RS12295 SM01294 DDI_RS12295 DDI_RS12315 SM00822 DDI_RS12315 DDI_RS12315 SM00823 Phosphopantetheine attachment site DDI_RS12315 SM00825 Beta-ketoacyl synthase DDI_RS12315 SM00826 DDI_RS12315 DDI_RS12315 SM01294 DDI_RS12315 DDI_RS12325 SM00822 DDI_RS12325 DDI_RS12325 SM00823 Phosphopantetheine attachment site DDI_RS12325 SM00825 Beta-ketoacyl synthase DDI_RS12325 SM01294 DDI_RS12325 DDI_RS12335 SM00823 Phosphopantetheine attachment site DDI_RS12335 SM00825 Beta-ketoacyl synthase DDI_RS12335 SM01294 DDI_RS12335 DDI_RS12345 SM00825 Beta-ketoacyl synthase DDI_RS12380 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDI_RS12380 SM00465 GIY-YIG type nucleases (URI domain) DDI_RS12385 SM00421 helix_turn_helix, Lux Regulon DDI_RS12385 SM00448 cheY-homologous receiver domain DDI_RS12440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS12440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS12460 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS12480 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDI_RS12490 SM00382 ATPases associated with a variety of cellular activities DDI_RS12505 SM01012 DDI_RS12505 DDI_RS12565 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDI_RS12645 SM00382 ATPases associated with a variety of cellular activities DDI_RS12695 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDI_RS12695 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DDI_RS12700 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DDI_RS12735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS12795 SM00382 ATPases associated with a variety of cellular activities DDI_RS12810 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS12860 SM00859 Semialdehyde dehydrogenase, NAD binding domain DDI_RS12870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS12870 SM00387 Histidine kinase-like ATPases DDI_RS12870 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS12875 SM00448 cheY-homologous receiver domain DDI_RS12875 SM00862 Transcriptional regulatory protein, C terminal DDI_RS12900 SM00825 Beta-ketoacyl synthase DDI_RS12960 SM00463 Small MutS-related domain DDI_RS12965 SM00855 Phosphoglycerate mutase family DDI_RS13045 SM00382 ATPases associated with a variety of cellular activities DDI_RS13055 SM00823 Phosphopantetheine attachment site DDI_RS13055 SM00824 Thioesterase DDI_RS13060 SM00923 MbtH-like protein DDI_RS13160 SM00382 ATPases associated with a variety of cellular activities DDI_RS13220 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DDI_RS13230 SM00354 helix_turn _helix lactose operon repressor DDI_RS13270 SM00382 ATPases associated with a variety of cellular activities DDI_RS13295 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS13310 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS13310 SM00895 DDI_RS13310 DDI_RS13335 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS13335 SM00866 DDI_RS13335 DDI_RS13345 SM00382 ATPases associated with a variety of cellular activities DDI_RS13360 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS13380 SM00859 Semialdehyde dehydrogenase, NAD binding domain DDI_RS13385 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS13395 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS13405 SM00822 DDI_RS13405 DDI_RS13455 SM00840 DDI_RS13455 DDI_RS13475 SM01001 AIR carboxylase DDI_RS13495 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS13500 SM00382 ATPases associated with a variety of cellular activities DDI_RS13570 SM00992 Hemimethylated DNA-binding protein YccV like DDI_RS13575 SM00881 CoA binding domain DDI_RS13585 SM00851 MGS-like domain DDI_RS13650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS13650 SM00387 Histidine kinase-like ATPases DDI_RS13650 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS13655 SM00448 cheY-homologous receiver domain DDI_RS13655 SM00862 Transcriptional regulatory protein, C terminal DDI_RS13695 SM00354 helix_turn _helix lactose operon repressor DDI_RS13710 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS13710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DDI_RS13720 SM00382 ATPases associated with a variety of cellular activities DDI_RS13745 SM00382 ATPases associated with a variety of cellular activities DDI_RS13785 SM00656 DDI_RS13785 DDI_RS13805 SM00871 Bacterial transcription activator, effector binding domain DDI_RS13830 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS13880 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS13900 SM00470 ParB-like nuclease domain DDI_RS13980 SM00116 Domain in cystathionine beta-synthase and other proteins. DDI_RS13980 SM01240 DDI_RS13980 DDI_RS14005 SM00564 beta-propeller repeat DDI_RS14025 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS14030 SM00028 Tetratricopeptide repeats DDI_RS14040 SM00562 DDI_RS14040 DDI_RS14045 SM00450 Rhodanese Homology Domain DDI_RS14075 SM00271 DnaJ molecular chaperone homology domain DDI_RS14120 SM00382 ATPases associated with a variety of cellular activities DDI_RS14160 SM00656 DDI_RS14160 DDI_RS14165 SM00656 DDI_RS14165 DDI_RS14180 SM00938 Nitrogen regulatory protein P-II DDI_RS14185 SM00382 ATPases associated with a variety of cellular activities DDI_RS14185 SM00448 cheY-homologous receiver domain DDI_RS14195 SM00387 Histidine kinase-like ATPases DDI_RS14195 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS14200 SM01211 DDI_RS14200 DDI_RS14205 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS14225 SM00382 ATPases associated with a variety of cellular activities DDI_RS14235 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS14235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DDI_RS14235 SM00267 diguanylate cyclase DDI_RS14240 SM00052 Putative diguanylate phosphodiesterase DDI_RS14270 SM00358 Double-stranded RNA binding motif DDI_RS14270 SM00535 Ribonuclease III family DDI_RS14315 SM00487 DEAD-like helicases superfamily DDI_RS14315 SM00490 helicase superfamily c-terminal domain DDI_RS14325 SM00986 Uracil DNA glycosylase superfamily DDI_RS14325 SM00987 UreE urease accessory protein, C-terminal domain DDI_RS14370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS14435 SM00382 ATPases associated with a variety of cellular activities DDI_RS14460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDI_RS14465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS14495 SM00487 DEAD-like helicases superfamily DDI_RS14495 SM00490 helicase superfamily c-terminal domain DDI_RS14495 SM00847 Helicase associated domain (HA2) Add an annotation DDI_RS14550 SM00382 ATPases associated with a variety of cellular activities DDI_RS14555 SM00947 Carbonic anhydrase DDI_RS14575 SM00382 ATPases associated with a variety of cellular activities DDI_RS14625 SM00479 DDI_RS14625 DDI_RS14640 SM00849 Metallo-beta-lactamase superfamily DDI_RS14645 SM00257 Lysin motif DDI_RS14695 SM00382 ATPases associated with a variety of cellular activities DDI_RS14695 SM01086 C-terminal, D2-small domain, of ClpB protein DDI_RS14705 SM00363 S4 RNA-binding domain DDI_RS14720 SM00830 Chorismate mutase type II DDI_RS14725 SM00830 Chorismate mutase type II DDI_RS14760 SM00382 ATPases associated with a variety of cellular activities DDI_RS14760 SM00962 SRP54-type protein, GTPase domain DDI_RS14760 SM00963 SRP54-type protein, helical bundle domain DDI_RS14815 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DDI_RS14825 SM00382 ATPases associated with a variety of cellular activities DDI_RS14850 SM00822 DDI_RS14850 DDI_RS14855 SM01060 DDI_RS14855 DDI_RS14860 SM00248 ankyrin repeats DDI_RS14870 SM00382 ATPases associated with a variety of cellular activities DDI_RS14895 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS14900 SM00833 Cobalamin synthesis protein cobW C-terminal domain DDI_RS14915 SM00448 cheY-homologous receiver domain DDI_RS14915 SM00850 LytTr DNA-binding domain DDI_RS14920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS14925 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS14925 SM00866 DDI_RS14925 DDI_RS14950 SM00382 ATPases associated with a variety of cellular activities DDI_RS15000 SM00487 DEAD-like helicases superfamily DDI_RS15000 SM00490 helicase superfamily c-terminal domain DDI_RS15015 SM01101 DDI_RS15015 DDI_RS15065 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DDI_RS15075 SM00267 diguanylate cyclase DDI_RS15150 SM01007 Class II Aldolase and Adducin N-terminal domain DDI_RS15175 SM00382 ATPases associated with a variety of cellular activities DDI_RS15190 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS15230 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS15230 SM00895 DDI_RS15230 DDI_RS15245 SM00382 ATPases associated with a variety of cellular activities DDI_RS15270 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS15285 SM00967 RNA 2'-O ribose methyltransferase substrate binding DDI_RS15295 SM01144 DDI_RS15295 DDI_RS15300 SM00881 CoA binding domain DDI_RS15305 SM00155 Phospholipase D. Active site motifs. DDI_RS15360 SM00382 ATPases associated with a variety of cellular activities DDI_RS15360 SM00930 DDI_RS15360 DDI_RS15395 SM00257 Lysin motif DDI_RS15485 SM00849 Metallo-beta-lactamase superfamily DDI_RS15500 SM01192 DDI_RS15500 DDI_RS15500 SM01193 DDI_RS15500 DDI_RS15515 SM00954 Region found in RelA / SpoT proteins DDI_RS15525 SM00073 Histidine Phosphotransfer domain DDI_RS15525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS15525 SM00387 Histidine kinase-like ATPases DDI_RS15525 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS15525 SM00448 cheY-homologous receiver domain DDI_RS15545 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS15550 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS15560 SM00858 DDI_RS15560 DDI_RS15565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DDI_RS15565 SM00091 PAS domain DDI_RS15565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS15590 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDI_RS15590 SM00292 breast cancer carboxy-terminal domain DDI_RS15590 SM00532 Ligase N family DDI_RS15605 SM01118 DDI_RS15605 DDI_RS15610 SM00287 Bacterial SH3 domain homologues DDI_RS15625 SM00905 Dihydroneopterin aldolase DDI_RS15630 SM01207 DDI_RS15630 DDI_RS15635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS15635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS15670 SM01091 Transporter associated domain DDI_RS15745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS15745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS15760 SM00967 RNA 2'-O ribose methyltransferase substrate binding DDI_RS15765 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS15765 SM00357 Cold shock protein domain DDI_RS15765 SM00955 DDI_RS15765 DDI_RS15775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS15775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS15790 SM00382 ATPases associated with a variety of cellular activities DDI_RS15810 SM01152 DDI_RS15810 DDI_RS15820 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS15840 SM00563 Phosphate acyltransferases DDI_RS15860 SM01061 CAT RNA binding domain DDI_RS15870 SM00354 helix_turn _helix lactose operon repressor DDI_RS15885 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS15885 SM00895 DDI_RS15885 DDI_RS15910 SM00354 helix_turn _helix lactose operon repressor DDI_RS15930 SM00382 ATPases associated with a variety of cellular activities DDI_RS15955 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS15955 SM00866 DDI_RS15955 DDI_RS16005 SM00829 Enoylreductase DDI_RS16010 SM00382 ATPases associated with a variety of cellular activities DDI_RS16015 SM01005 Alanine racemase, C-terminal domain DDI_RS16025 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS16210 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS16235 SM00382 ATPases associated with a variety of cellular activities DDI_RS16275 SM00344 helix_turn_helix ASNC type DDI_RS16330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS16330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS16335 SM00267 diguanylate cyclase DDI_RS16350 SM00903 Flavin reductase like domain DDI_RS16455 SM00354 helix_turn _helix lactose operon repressor DDI_RS16470 SM00382 ATPases associated with a variety of cellular activities DDI_RS16500 SM00382 ATPases associated with a variety of cellular activities DDI_RS16520 SM00420 helix_turn_helix, Deoxyribose operon repressor DDI_RS16520 SM01134 DDI_RS16520 DDI_RS16540 SM01130 DDI_RS16540 DDI_RS16565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS16610 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS16610 SM00895 DDI_RS16610 DDI_RS16625 SM00644 DDI_RS16625 DDI_RS16650 SM00382 ATPases associated with a variety of cellular activities DDI_RS16660 SM01240 DDI_RS16660 DDI_RS16685 SM00957 SecA DEAD-like domain DDI_RS16685 SM00958 SecA preprotein cross-linking domain DDI_RS16705 SM00864 Tubulin/FtsZ family, GTPase domain DDI_RS16705 SM00865 Tubulin/FtsZ family, C-terminal domain DDI_RS16710 SM00842 Cell division protein FtsA DDI_RS16780 SM00354 helix_turn _helix lactose operon repressor DDI_RS16800 SM00917 LeuA allosteric (dimerisation) domain DDI_RS16805 SM01329 DDI_RS16805 DDI_RS16860 SM00382 ATPases associated with a variety of cellular activities DDI_RS16905 SM00486 DNA polymerase type-B family DDI_RS16910 SM00487 DEAD-like helicases superfamily DDI_RS16910 SM00490 helicase superfamily c-terminal domain DDI_RS16920 SM00271 DnaJ molecular chaperone homology domain DDI_RS16940 SM00650 Ribosomal RNA adenine dimethylases DDI_RS16980 SM00851 MGS-like domain DDI_RS16980 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DDI_RS16985 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DDI_RS17020 SM00904 Riboflavin kinase DDI_RS17040 SM00271 DnaJ molecular chaperone homology domain DDI_RS17060 SM00852 Probable molybdopterin binding domain DDI_RS17095 SM00448 cheY-homologous receiver domain DDI_RS17095 SM00862 Transcriptional regulatory protein, C terminal DDI_RS17105 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS17105 SM00871 Bacterial transcription activator, effector binding domain DDI_RS17110 SM00855 Phosphoglycerate mutase family DDI_RS17130 SM00382 ATPases associated with a variety of cellular activities DDI_RS17135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS17135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS17160 SM00346 helix_turn_helix isocitrate lyase regulation DDI_RS17180 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DDI_RS17185 SM00861 Transketolase, pyrimidine binding domain DDI_RS17210 SM00731 SprT homologues. DDI_RS17235 SM00732 Likely ribonuclease with RNase H fold. DDI_RS17250 SM00788 Adenylosuccinate synthetase DDI_RS17260 SM00244 prohibitin homologues DDI_RS17265 SM00244 prohibitin homologues DDI_RS17285 SM00853 MutL C terminal dimerisation domain DDI_RS17285 SM01340 DDI_RS17285 DDI_RS17290 SM00257 Lysin motif DDI_RS17290 SM00646 DDI_RS17290 DDI_RS17335 SM00382 ATPases associated with a variety of cellular activities DDI_RS17365 SM00382 ATPases associated with a variety of cellular activities DDI_RS17405 SM00797 Allophanate hydrolase subunit 2 DDI_RS17410 SM00796 Allophanate hydrolase subunit 1 DDI_RS17415 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS17440 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS17445 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS17460 SM00382 ATPases associated with a variety of cellular activities DDI_RS17470 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS17495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS17505 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS17510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS17510 SM00382 ATPases associated with a variety of cellular activities DDI_RS17515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DDI_RS17515 SM00091 PAS domain DDI_RS17580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS17595 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS17630 SM00890 Domain of unknown function DDI_RS17640 SM00736 Dystroglycan-type cadherin-like domains. DDI_RS17670 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS17720 SM00382 ATPases associated with a variety of cellular activities DDI_RS17740 SM00479 DDI_RS17740 DDI_RS17795 SM00841 Elongation factor P, C-terminal DDI_RS17795 SM01185 DDI_RS17795 DDI_RS17840 SM01018 B12 binding domain DDI_RS17845 SM00346 helix_turn_helix isocitrate lyase regulation DDI_RS17970 SM00662 RNA polymerases D DDI_RS17975 SM00363 S4 RNA-binding domain DDI_RS17975 SM01390 DDI_RS17975 DDI_RS18040 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DDI_RS18045 SM01374 DDI_RS18045 DDI_RS18065 SM00322 K homology RNA-binding domain DDI_RS18080 SM01382 DDI_RS18080 DDI_RS18080 SM01383 DDI_RS18080 DDI_RS18100 SM01403 DDI_RS18100 DDI_RS18120 SM00838 Elongation factor G C-terminus DDI_RS18120 SM00889 Elongation factor G, domain IV DDI_RS18160 SM00448 cheY-homologous receiver domain DDI_RS18160 SM00862 Transcriptional regulatory protein, C terminal DDI_RS18165 SM00387 Histidine kinase-like ATPases DDI_RS18165 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS18170 SM00382 ATPases associated with a variety of cellular activities DDI_RS18180 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS18195 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS18210 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS18245 SM00382 ATPases associated with a variety of cellular activities DDI_RS18270 SM00100 Cyclic nucleotide-monophosphate binding domain DDI_RS18270 SM00419 helix_turn_helix, cAMP Regulatory protein DDI_RS18285 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS18325 SM00656 DDI_RS18325 DDI_RS18330 SM00656 DDI_RS18330 DDI_RS18345 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS18385 SM00965 Secretin and TonB N terminus short domain DDI_RS18430 SM00363 S4 RNA-binding domain DDI_RS18450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS18450 SM00387 Histidine kinase-like ATPases DDI_RS18450 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS18455 SM00448 cheY-homologous receiver domain DDI_RS18455 SM00862 Transcriptional regulatory protein, C terminal DDI_RS18470 SM00563 Phosphate acyltransferases DDI_RS18475 SM00316 Ribosomal protein S1-like RNA-binding domain DDI_RS18475 SM00732 Likely ribonuclease with RNase H fold. DDI_RS18505 SM00420 helix_turn_helix, Deoxyribose operon repressor DDI_RS18505 SM01134 DDI_RS18505 DDI_RS18515 SM00450 Rhodanese Homology Domain DDI_RS18540 SM00642 Alpha-amylase domain DDI_RS18545 SM00642 Alpha-amylase domain DDI_RS18550 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS18555 SM00357 Cold shock protein domain DDI_RS18565 SM00859 Semialdehyde dehydrogenase, NAD binding domain DDI_RS18585 SM00354 helix_turn _helix lactose operon repressor DDI_RS18645 SM00341 Helicase and RNase D C-terminal DDI_RS18645 SM00487 DEAD-like helicases superfamily DDI_RS18645 SM00490 helicase superfamily c-terminal domain DDI_RS18645 SM00956 DDI_RS18645 DDI_RS18705 SM01219 DDI_RS18705 DDI_RS18740 SM00382 ATPases associated with a variety of cellular activities DDI_RS18750 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS18760 SM00998 Adenylosuccinate lyase C-terminus DDI_RS18775 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS18835 SM00984 UDP binding domain DDI_RS18855 SM00357 Cold shock protein domain DDI_RS18855 SM00382 ATPases associated with a variety of cellular activities DDI_RS18855 SM00959 Rho termination factor, N-terminal domain DDI_RS18865 SM00487 DEAD-like helicases superfamily DDI_RS18865 SM00490 helicase superfamily c-terminal domain DDI_RS18875 SM00060 Fibronectin type 3 domain DDI_RS18875 SM00710 Parallel beta-helix repeats DDI_RS18880 SM00060 Fibronectin type 3 domain DDI_RS18960 SM00382 ATPases associated with a variety of cellular activities DDI_RS19080 SM00487 DEAD-like helicases superfamily DDI_RS19080 SM00490 helicase superfamily c-terminal domain DDI_RS19085 SM00354 helix_turn _helix lactose operon repressor DDI_RS19100 SM00382 ATPases associated with a variety of cellular activities DDI_RS19100 SM01086 C-terminal, D2-small domain, of ClpB protein DDI_RS19155 SM00098 Alkaline phosphatase homologues DDI_RS19180 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS19215 SM00448 cheY-homologous receiver domain DDI_RS19215 SM00862 Transcriptional regulatory protein, C terminal DDI_RS19220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS19220 SM00387 Histidine kinase-like ATPases DDI_RS19220 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS19255 SM00382 ATPases associated with a variety of cellular activities DDI_RS19280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS19285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS19290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS19295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS19365 SM00382 ATPases associated with a variety of cellular activities DDI_RS19370 SM00382 ATPases associated with a variety of cellular activities DDI_RS19370 SM00962 SRP54-type protein, GTPase domain DDI_RS19370 SM00963 SRP54-type protein, helical bundle domain DDI_RS19470 SM00028 Tetratricopeptide repeats DDI_RS19505 SM00382 ATPases associated with a variety of cellular activities DDI_RS19510 SM00382 ATPases associated with a variety of cellular activities DDI_RS19535 SM00448 cheY-homologous receiver domain DDI_RS19540 SM00387 Histidine kinase-like ATPases DDI_RS19585 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS19585 SM00895 DDI_RS19585 DDI_RS19620 SM00382 ATPases associated with a variety of cellular activities DDI_RS19640 SM00382 ATPases associated with a variety of cellular activities DDI_RS19740 SM00532 Ligase N family DDI_RS19745 SM00072 Guanylate kinase homologues. DDI_RS19750 SM01409 DDI_RS19750 DDI_RS19755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDI_RS19755 SM00954 Region found in RelA / SpoT proteins DDI_RS19765 SM00487 DEAD-like helicases superfamily DDI_RS19765 SM00490 helicase superfamily c-terminal domain DDI_RS19810 SM01230 DDI_RS19810 DDI_RS19815 SM00091 PAS domain DDI_RS19815 SM00387 Histidine kinase-like ATPases DDI_RS19815 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS19820 SM00382 ATPases associated with a variety of cellular activities DDI_RS19820 SM00448 cheY-homologous receiver domain DDI_RS19830 SM00729 Elongator protein 3, MiaB family, Radical SAM DDI_RS19845 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DDI_RS19845 SM00474 3'-5' exonuclease DDI_RS19845 SM00475 5'-3' exonuclease DDI_RS19845 SM00482 DNA polymerase A domain DDI_RS19900 SM00354 helix_turn _helix lactose operon repressor DDI_RS19920 SM00382 ATPases associated with a variety of cellular activities DDI_RS19935 SM00448 cheY-homologous receiver domain DDI_RS19935 SM00862 Transcriptional regulatory protein, C terminal DDI_RS19940 SM00387 Histidine kinase-like ATPases DDI_RS19940 SM00388 His Kinase A (phosphoacceptor) domain DDI_RS19950 SM00382 ATPases associated with a variety of cellular activities DDI_RS19955 SM00327 von Willebrand factor (vWF) type A domain DDI_RS19960 SM00344 helix_turn_helix ASNC type DDI_RS19970 SM01228 DDI_RS19970 DDI_RS20015 SM00382 ATPases associated with a variety of cellular activities DDI_RS20055 SM00563 Phosphate acyltransferases DDI_RS20110 SM00825 Beta-ketoacyl synthase DDI_RS20125 SM00825 Beta-ketoacyl synthase DDI_RS20130 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDI_RS20130 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DDI_RS20130 SM00091 PAS domain DDI_RS20130 SM00267 diguanylate cyclase DDI_RS20165 SM00382 ATPases associated with a variety of cellular activities DDI_RS20175 SM00062 Bacterial periplasmic substrate-binding proteins DDI_RS20270 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS20275 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS20315 SM01234 DDI_RS20315 DDI_RS20330 SM00382 ATPases associated with a variety of cellular activities DDI_RS20330 SM00760 Bacterial dnaA protein helix-turn-helix domain DDI_RS20335 SM00480 DNA polymerase III beta subunit DDI_RS20345 SM00387 Histidine kinase-like ATPases DDI_RS20345 SM00433 TopoisomeraseII DDI_RS20390 SM00998 Adenylosuccinate lyase C-terminus DDI_RS20395 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS20395 SM00866 DDI_RS20395 DDI_RS20435 SM00091 PAS domain DDI_RS20465 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS20490 SM00382 ATPases associated with a variety of cellular activities DDI_RS20560 SM00796 Allophanate hydrolase subunit 1 DDI_RS20560 SM00797 Allophanate hydrolase subunit 2 DDI_RS20560 SM00878 Biotin carboxylase C-terminal domain DDI_RS20575 SM00382 ATPases associated with a variety of cellular activities DDI_RS20610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DDI_RS20610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDI_RS20610 SM01358 DDI_RS20610 DDI_RS20650 SM00382 ATPases associated with a variety of cellular activities DDI_RS20660 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS20690 SM00347 helix_turn_helix multiple antibiotic resistance protein DDI_RS20710 SM00823 Phosphopantetheine attachment site DDI_RS20740 SM00342 helix_turn_helix, arabinose operon control protein DDI_RS20745 SM00382 ATPases associated with a variety of cellular activities DDI_RS20755 SM00382 ATPases associated with a variety of cellular activities DDI_RS20755 SM00448 cheY-homologous receiver domain DDI_RS20760 SM00387 Histidine kinase-like ATPases DDI_RS20845 SM00421 helix_turn_helix, Lux Regulon DDI_RS20865 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS20875 SM00530 Helix-turn-helix XRE-family like proteins DDI_RS20930 SM00382 ATPases associated with a variety of cellular activities DDI_RS20935 SM00382 ATPases associated with a variety of cellular activities DDI_RS20980 SM00382 ATPases associated with a variety of cellular activities DDI_RS21035 SM00382 ATPases associated with a variety of cellular activities DDI_RS21040 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDI_RS21100 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DDI_RS21100 SM01232 DDI_RS21100 DDI_RS21170 SM00450 Rhodanese Homology Domain DDI_RS21185 SM00971 Serine acetyltransferase, N-terminal DDI_RS21235 SM00859 Semialdehyde dehydrogenase, NAD binding domain DDI_RS21290 SM01004 Delta-aminolevulinic acid dehydratase DDI_RS21295 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DDI_RS21310 SM00450 Rhodanese Homology Domain DDI_RS21315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDI_RS21430 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DDI_RS21430 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DDI_RS21435 SM00649 Ribosomal protein L11/L12 DDI_RS21465 SM00663 RNA polymerase I subunit A N-terminus DDI_RS21485 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDI_RS21490 SM00876 Biotin and Thiamin Synthesis associated domain DDI_RS21545 SM00411 bacterial (prokaryotic) histone like domain DDI_RS21555 SM01209 DDI_RS21555 DDI_RS21555 SM01210 DDI_RS21555 DDI_RS21560 SM00798 AICARFT/IMPCHase bienzyme DDI_RS21560 SM00851 MGS-like domain