DDI_RS01260 435f326ffa767f7cfdb40f70ff335f05 279 Pfam PF01026 TatD related DNase 17 267 1.0E-65 T 28-03-2018 IPR001130 TatD family GO:0016788 DDI_RS01260 435f326ffa767f7cfdb40f70ff335f05 279 Gene3D G3DSA:3.20.20.140 14 278 3.0E-77 T 28-03-2018 DDI_RS01260 435f326ffa767f7cfdb40f70ff335f05 279 PIRSF PIRSF005902 2 271 1.2E-68 T 28-03-2018 IPR001130 TatD family GO:0016788 DDI_RS01260 435f326ffa767f7cfdb40f70ff335f05 279 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 204 220 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDI_RS01260 435f326ffa767f7cfdb40f70ff335f05 279 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 16 24 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDI_RS01260 435f326ffa767f7cfdb40f70ff335f05 279 SUPERFAMILY SSF51556 16 268 2.02E-78 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS19230 c93881b50dbca133986687b5d445da3a 257 Pfam PF11340 Protein of unknown function (DUF3142) 106 187 3.6E-16 T 28-03-2018 IPR021488 Protein of unknown function DUF3142 DDI_RS19230 c93881b50dbca133986687b5d445da3a 257 Gene3D G3DSA:3.20.20.80 106 243 5.5E-9 T 28-03-2018 DDI_RS19230 c93881b50dbca133986687b5d445da3a 257 SUPERFAMILY SSF51445 121 198 3.84E-7 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS15945 c93f18dbf5aed705a24ae5dabd2e1fbb 274 SUPERFAMILY SSF53649 2 253 8.18E-47 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS15945 c93f18dbf5aed705a24ae5dabd2e1fbb 274 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 3 208 3.2E-12 T 28-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 DDI_RS15945 c93f18dbf5aed705a24ae5dabd2e1fbb 274 Gene3D G3DSA:3.40.720.10 1 259 6.2E-31 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 DDI_RS00595 a835dbf405bfbe6d90784ac8174aa7b7 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 7.2E-50 T 28-03-2018 DDI_RS00595 a835dbf405bfbe6d90784ac8174aa7b7 154 SUPERFAMILY SSF102114 24 126 2.35E-7 T 28-03-2018 DDI_RS00595 a835dbf405bfbe6d90784ac8174aa7b7 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 1.8E-60 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 DDI_RS00595 a835dbf405bfbe6d90784ac8174aa7b7 154 Gene3D G3DSA:3.20.20.70 10 151 5.0E-10 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS00595 a835dbf405bfbe6d90784ac8174aa7b7 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DDI_RS00595 a835dbf405bfbe6d90784ac8174aa7b7 154 PIRSF PIRSF000368 1 154 2.5E-56 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 DDI_RS18675 7cd882b65531dbf7ef75ca4b6c6f546d 720 Gene3D G3DSA:3.40.50.300 283 384 2.0E-25 T 28-03-2018 DDI_RS18675 7cd882b65531dbf7ef75ca4b6c6f546d 720 SUPERFAMILY SSF52540 4 642 1.16E-180 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18675 7cd882b65531dbf7ef75ca4b6c6f546d 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 9.0E-73 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DDI_RS18675 7cd882b65531dbf7ef75ca4b6c6f546d 720 Gene3D G3DSA:3.40.50.300 148 282 3.0E-31 T 28-03-2018 DDI_RS18675 7cd882b65531dbf7ef75ca4b6c6f546d 720 Gene3D G3DSA:3.40.50.300 4 147 9.5E-28 T 28-03-2018 DDI_RS18675 7cd882b65531dbf7ef75ca4b6c6f546d 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 28-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 DDI_RS18675 7cd882b65531dbf7ef75ca4b6c6f546d 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.7E-74 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DDI_RS18675 7cd882b65531dbf7ef75ca4b6c6f546d 720 Gene3D G3DSA:3.40.50.300 385 675 5.5E-54 T 28-03-2018 DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 Gene3D G3DSA:1.10.486.10 458 667 2.7E-70 T 28-03-2018 DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 11 1101 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 SUPERFAMILY SSF52540 383 816 3.51E-92 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 PIRSF PIRSF000980 9 1157 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 SUPERFAMILY SSF52980 832 1144 9.12E-50 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 9 1151 19.889 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 Gene3D G3DSA:1.10.10.160 100 206 8.4E-33 T 28-03-2018 DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 10 815 6.1E-277 T 28-03-2018 DDI_RS09695 c18f8a66a27d53ddf4483ae0e81ee780 1162 SUPERFAMILY SSF52540 10 368 1.49E-100 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15130 807d16858ec11a0dd3b05570114bec18 400 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 400 205.806 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 DDI_RS15130 807d16858ec11a0dd3b05570114bec18 400 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 395 5.7E-157 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 DDI_RS15130 807d16858ec11a0dd3b05570114bec18 400 SUPERFAMILY SSF56112 2 396 3.16E-92 T 28-03-2018 IPR011009 Protein kinase-like domain DDI_RS15130 807d16858ec11a0dd3b05570114bec18 400 Gene3D G3DSA:3.30.200.20 1 114 1.6E-35 T 28-03-2018 DDI_RS15130 807d16858ec11a0dd3b05570114bec18 400 Gene3D G3DSA:3.90.1200.10 115 364 2.6E-11 T 28-03-2018 DDI_RS15130 807d16858ec11a0dd3b05570114bec18 400 Pfam PF01636 Phosphotransferase enzyme family 33 263 2.6E-14 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase DDI_RS15130 807d16858ec11a0dd3b05570114bec18 400 PIRSF PIRSF031134 1 400 3.7E-162 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 DDI_RS05210 728d7bef8d87ac796e33a9b098c43584 348 Pfam PF02445 Quinolinate synthetase A protein 32 341 3.5E-103 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DDI_RS05210 728d7bef8d87ac796e33a9b098c43584 348 Gene3D G3DSA:3.40.50.10800 23 110 2.7E-17 T 28-03-2018 DDI_RS05210 728d7bef8d87ac796e33a9b098c43584 348 Gene3D G3DSA:3.40.50.10800 118 208 3.5E-18 T 28-03-2018 DDI_RS05210 728d7bef8d87ac796e33a9b098c43584 348 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 348 70.287 T 28-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DDI_RS05210 728d7bef8d87ac796e33a9b098c43584 348 Gene3D G3DSA:3.40.50.10800 209 324 7.3E-32 T 28-03-2018 DDI_RS05210 728d7bef8d87ac796e33a9b098c43584 348 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 28 342 2.1E-121 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DDI_RS05210 728d7bef8d87ac796e33a9b098c43584 348 SUPERFAMILY SSF142754 29 342 2.62E-106 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 35.898 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 Gene3D G3DSA:3.30.1490.100 243 351 4.4E-27 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 SUPERFAMILY SSF100879 241 349 3.14E-25 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 234 337 5.4E-8 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 SUPERFAMILY SSF56672 1 234 3.47E-90 T 28-03-2018 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 Gene3D G3DSA:1.10.150.20 171 242 8.2E-23 T 28-03-2018 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 Pfam PF00817 impB/mucB/samB family 7 154 4.8E-47 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 Gene3D G3DSA:3.30.70.270 113 170 4.9E-20 T 28-03-2018 DDI_RS15105 076bb2c18766fdcb11e57b5b61ed8b95 352 Gene3D G3DSA:3.30.70.270 41 112 9.5E-24 T 28-03-2018 DDI_RS02370 84da0dddb1abea5801a986029fc68b79 143 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 3.8E-56 T 28-03-2018 IPR009883 Inner membrane protein YgfX DDI_RS02370 84da0dddb1abea5801a986029fc68b79 143 PIRSF PIRSF020653 1 138 1.2E-53 T 28-03-2018 IPR009883 Inner membrane protein YgfX DDI_RS02370 84da0dddb1abea5801a986029fc68b79 143 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 32 122 2.0E-22 T 28-03-2018 IPR009883 Inner membrane protein YgfX DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 Gene3D G3DSA:3.50.50.60 254 672 3.9E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 Gene3D G3DSA:3.40.50.150 9 253 4.6E-85 T 28-03-2018 DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 669 1.7E-151 T 28-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 664 28.025 T 28-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 Pfam PF01266 FAD dependent oxidoreductase 268 639 1.4E-44 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 SUPERFAMILY SSF51905 267 482 1.42E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 SUPERFAMILY SSF51905 613 667 1.42E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 SUPERFAMILY SSF51905 575 586 1.42E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12905 cc2259a52c4756f9eb28aba52093f798 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 243 4.6E-47 T 28-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 DDI_RS01115 25a7fcb92852d22a61a8615b7fa6bcad 410 Pfam PF07690 Major Facilitator Superfamily 6 350 1.0E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS01115 25a7fcb92852d22a61a8615b7fa6bcad 410 Gene3D G3DSA:1.20.1250.20 201 400 7.6E-9 T 28-03-2018 DDI_RS01115 25a7fcb92852d22a61a8615b7fa6bcad 410 Gene3D G3DSA:1.20.1250.20 2 191 2.0E-11 T 28-03-2018 DDI_RS01115 25a7fcb92852d22a61a8615b7fa6bcad 410 SUPERFAMILY SSF103473 4 395 6.41E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS21485 0eba97b8096b1a660cce934f83047bfc 476 SUPERFAMILY SSF53383 84 464 9.93E-93 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS21485 0eba97b8096b1a660cce934f83047bfc 476 Gene3D G3DSA:3.90.1150.10 371 468 1.2E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS21485 0eba97b8096b1a660cce934f83047bfc 476 Gene3D G3DSA:3.40.640.10 126 370 6.2E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS21485 0eba97b8096b1a660cce934f83047bfc 476 Pfam PF00155 Aminotransferase class I and II 119 448 3.6E-35 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS21485 0eba97b8096b1a660cce934f83047bfc 476 SMART SM00345 7 66 1.8E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS21485 0eba97b8096b1a660cce934f83047bfc 476 Gene3D G3DSA:1.10.10.10 1 68 8.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21485 0eba97b8096b1a660cce934f83047bfc 476 SUPERFAMILY SSF46785 1 69 2.57E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21485 0eba97b8096b1a660cce934f83047bfc 476 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 66 1.7E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 6.4E-21 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Gene3D G3DSA:3.30.70.380 698 794 1.4E-22 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 SUPERFAMILY SSF50249 35 195 9.3E-50 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Gene3D G3DSA:3.30.56.10 1 54 4.2E-12 T 28-03-2018 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 SUPERFAMILY SSF55681 467 690 2.83E-52 T 28-03-2018 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 SMART SM00873 212 385 7.7E-97 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Pfam PF01588 Putative tRNA binding domain 45 145 3.9E-27 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Gene3D G3DSA:2.40.50.140 55 154 2.9E-44 T 28-03-2018 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Gene3D G3DSA:3.30.930.10 490 690 5.2E-36 T 28-03-2018 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 SUPERFAMILY SSF56037 195 396 4.45E-76 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 47.965 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Gene3D G3DSA:3.50.40.10 195 396 1.2E-72 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 3.3E-27 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Gene3D G3DSA:3.30.56.10 401 475 1.1E-25 T 28-03-2018 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.7E-288 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 SUPERFAMILY SSF46955 404 475 1.74E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 SUPERFAMILY SSF54991 697 794 7.72E-29 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 Pfam PF03483 B3/4 domain 212 385 6.9E-69 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 SMART SM00874 403 471 1.8E-30 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DDI_RS09995 76df254b60f0a672c81bfc74ff7f0d99 795 SMART SM00896 701 794 3.1E-42 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DDI_RS05350 93be6c675b6c3c8c5be126ae25911910 529 Pfam PF03741 Integral membrane protein TerC family 15 203 1.0E-50 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 DDI_RS05350 93be6c675b6c3c8c5be126ae25911910 529 Gene3D G3DSA:3.30.465.10 439 520 3.6E-18 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 DDI_RS05350 93be6c675b6c3c8c5be126ae25911910 529 Pfam PF03471 Transporter associated domain 443 519 1.6E-14 T 28-03-2018 IPR005170 Transporter-associated domain DDI_RS05350 93be6c675b6c3c8c5be126ae25911910 529 SMART SM01091 442 521 8.5E-21 T 28-03-2018 IPR005170 Transporter-associated domain DDI_RS05350 93be6c675b6c3c8c5be126ae25911910 529 SUPERFAMILY SSF56176 440 525 2.64E-18 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 DDI_RS05350 93be6c675b6c3c8c5be126ae25911910 529 SUPERFAMILY SSF54631 293 427 5.31E-24 T 28-03-2018 DDI_RS05350 93be6c675b6c3c8c5be126ae25911910 529 Gene3D G3DSA:3.10.580.10 286 438 5.0E-23 T 28-03-2018 DDI_RS05350 93be6c675b6c3c8c5be126ae25911910 529 Pfam PF00571 CBS domain 376 425 1.2E-6 T 28-03-2018 IPR000644 CBS domain DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.7E-25 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 Gene3D G3DSA:2.30.30.30 4 63 2.5E-23 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.988 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 SMART SM00841 131 186 1.9E-31 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 9.9E-24 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 SUPERFAMILY SSF50104 6 63 2.65E-17 T 28-03-2018 IPR008991 Translation protein SH3-like domain DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 SMART SM01185 69 123 2.3E-27 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.3E-76 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.2E-24 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 Gene3D G3DSA:2.40.50.140 126 186 8.3E-27 T 28-03-2018 DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 PIRSF PIRSF005901 2 188 1.1E-66 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 SUPERFAMILY SSF50249 70 128 8.14E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 SUPERFAMILY SSF50249 130 187 3.43E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS17795 25b6e8022d3e5081c3a97b675efa0b4f 188 Gene3D G3DSA:2.40.50.140 67 125 2.4E-26 T 28-03-2018 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 Pfam PF03454 MoeA C-terminal region (domain IV) 331 403 7.1E-20 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 SMART SM00852 180 317 1.9E-45 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 Pfam PF00994 Probable molybdopterin binding domain 182 316 1.3E-27 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 Gene3D G3DSA:3.40.980.10 150 324 2.9E-57 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 167 1.0E-47 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 SUPERFAMILY SSF53218 177 323 1.57E-44 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 Gene3D G3DSA:2.40.340.10 329 401 8.2E-21 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 SUPERFAMILY SSF63882 4 176 1.57E-57 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 Gene3D G3DSA:2.170.190.11 61 141 2.0E-30 T 28-03-2018 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 Gene3D G3DSA:3.90.105.10 26 60 7.0E-10 T 28-03-2018 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 253 286 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 SUPERFAMILY SSF63867 327 407 3.79E-24 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDI_RS07105 e6d56cf43eded68fecd693de28809f22 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 313 7.4E-34 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.9E-81 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 SMART SM01209 103 296 2.1E-136 T 28-03-2018 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 Gene3D G3DSA:3.90.600.10 330 424 2.8E-34 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.428 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 SUPERFAMILY SSF52440 1 103 5.9E-37 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 Gene3D G3DSA:3.40.50.20 2 95 1.8E-37 T 28-03-2018 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 SUPERFAMILY SSF51246 329 424 3.4E-32 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 Gene3D G3DSA:3.30.1490.20 121 190 1.0E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 SMART SM01210 330 423 1.7E-53 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 28-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.6E-35 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 SUPERFAMILY SSF56059 104 325 5.83E-66 T 28-03-2018 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 5.3E-184 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 Gene3D G3DSA:3.30.470.20 191 329 1.3E-61 T 28-03-2018 DDI_RS21555 f6d3f23de94a9e8abc12f126d88c3482 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.0E-29 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 5.0E-45 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.955 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Gene3D G3DSA:3.40.120.10 269 373 3.9E-27 T 28-03-2018 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Gene3D G3DSA:3.30.310.50 374 444 2.5E-18 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 9.7E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.3E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.3E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 2.3E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Gene3D G3DSA:3.40.120.10 3 154 3.3E-48 T 28-03-2018 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 SUPERFAMILY SSF53738 156 256 4.32E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 SUPERFAMILY SSF53738 3 181 2.39E-49 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 7.0E-197 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 2.3E-31 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Gene3D G3DSA:3.40.120.10 155 268 8.9E-35 T 28-03-2018 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.9E-21 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 SUPERFAMILY SSF55957 357 444 1.7E-22 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS02115 12b60388de499abce34b6a1ad95b0934 445 SUPERFAMILY SSF53738 258 365 1.29E-29 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS09125 2378f18ee4fe1c128ecf5677bc573e35 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 62 3.0E-12 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS09125 2378f18ee4fe1c128ecf5677bc573e35 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 2.3E-124 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DDI_RS09125 2378f18ee4fe1c128ecf5677bc573e35 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 38.665 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DDI_RS09125 2378f18ee4fe1c128ecf5677bc573e35 332 SUPERFAMILY SSF47648 1 67 2.75E-15 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS09125 2378f18ee4fe1c128ecf5677bc573e35 332 Gene3D G3DSA:1.20.970.10 1 67 1.9E-14 T 28-03-2018 DDI_RS09125 2378f18ee4fe1c128ecf5677bc573e35 332 Pfam PF00591 Glycosyl transferase family, a/b domain 74 322 6.8E-99 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS09125 2378f18ee4fe1c128ecf5677bc573e35 332 Gene3D G3DSA:3.40.1030.10 70 331 2.9E-92 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS09125 2378f18ee4fe1c128ecf5677bc573e35 332 SUPERFAMILY SSF52418 70 328 6.02E-91 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 Pfam PF01256 Carbohydrate kinase 261 499 4.1E-70 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 Pfam PF03853 YjeF-related protein N-terminus 43 203 3.6E-40 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 Gene3D G3DSA:3.40.50.10260 20 232 2.3E-60 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 SUPERFAMILY SSF53613 237 503 4.68E-77 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 237 503 1.1E-83 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 PIRSF PIRSF017184 20 507 3.7E-153 T 28-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 Gene3D G3DSA:3.40.1190.20 233 504 5.4E-55 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 442 452 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 238 507 22.734 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 23 224 21.644 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 SUPERFAMILY SSF64153 26 260 2.22E-60 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DDI_RS17300 58aa8fb3d94a81a352df3383ebedeefa 513 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 30 223 1.2E-51 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DDI_RS06080 6718e3f4989f5f16f8bd6a85378ccb75 341 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 3 339 3.0E-143 T 28-03-2018 IPR019856 CRISPR-associated protein Cas1, DVULG subtype GO:0004520|GO:0043571|GO:0046872 DDI_RS06080 6718e3f4989f5f16f8bd6a85378ccb75 341 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 335 3.5E-83 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS06080 6718e3f4989f5f16f8bd6a85378ccb75 341 Pfam PF01867 CRISPR associated protein Cas1 8 295 2.9E-99 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS06080 6718e3f4989f5f16f8bd6a85378ccb75 341 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 326 27.323 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS15675 1d06bc00f13acc97ed64c0b77d73e4e8 68 Gene3D G3DSA:3.30.1910.10 1 62 7.2E-31 T 28-03-2018 DDI_RS15675 1d06bc00f13acc97ed64c0b77d73e4e8 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.3E-30 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 DDI_RS15675 1d06bc00f13acc97ed64c0b77d73e4e8 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 4.0E-27 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 DDI_RS05390 598e4163fe64d3e1717b14895e581cb1 289 Gene3D G3DSA:3.90.550.10 1 289 2.9E-69 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05390 598e4163fe64d3e1717b14895e581cb1 289 SUPERFAMILY SSF53448 1 286 8.34E-90 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05390 598e4163fe64d3e1717b14895e581cb1 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.3E-156 T 28-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DDI_RS05390 598e4163fe64d3e1717b14895e581cb1 289 Pfam PF00483 Nucleotidyl transferase 2 237 5.7E-68 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DDI_RS16730 7c7588c1f0523c64c747815edd7b66f6 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 386 7.5E-135 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 DDI_RS16730 7c7588c1f0523c64c747815edd7b66f6 400 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 29 396 41.641 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 DDI_RS16730 7c7588c1f0523c64c747815edd7b66f6 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 DDI_RS16730 7c7588c1f0523c64c747815edd7b66f6 400 Pfam PF01098 Cell cycle protein 33 388 2.0E-124 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 DDI_RS09910 14418c1cd73d213d474ac5f43d3adc82 110 Gene3D G3DSA:2.60.120.10 1 110 3.3E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS09910 14418c1cd73d213d474ac5f43d3adc82 110 Pfam PF07883 Cupin domain 35 94 1.6E-10 T 28-03-2018 IPR013096 Cupin 2, conserved barrel DDI_RS09910 14418c1cd73d213d474ac5f43d3adc82 110 PIRSF PIRSF029883 1 110 8.3E-28 T 28-03-2018 IPR025499 Pectin degradation protein KdgF DDI_RS09910 14418c1cd73d213d474ac5f43d3adc82 110 SUPERFAMILY SSF51182 9 110 5.06E-19 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS07880 bf40622903a112065c9dafc785713210 395 Pfam PF04235 Protein of unknown function (DUF418) 222 381 6.7E-41 T 28-03-2018 IPR007349 Domain of unknown function DUF418 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 Gene3D G3DSA:1.10.275.10 4 105 1.6E-20 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 Gene3D G3DSA:1.10.40.30 376 443 1.4E-21 T 28-03-2018 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 4.3E-25 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 4.3E-25 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 4.3E-25 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 4.3E-25 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 SUPERFAMILY SSF48557 11 445 7.07E-123 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 442 7.4E-19 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 Gene3D G3DSA:1.20.200.10 106 375 1.8E-81 T 28-03-2018 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 Pfam PF00206 Lyase 17 297 1.6E-51 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 1.7E-11 T 28-03-2018 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 1.7E-11 T 28-03-2018 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 PRINTS PR00145 Argininosuccinate lyase family signature 100 122 1.7E-11 T 28-03-2018 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.7E-11 T 28-03-2018 DDI_RS20390 cd5d38a74b700f7808373ea387c8c70e 450 SMART SM00998 364 443 4.7E-26 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 SUPERFAMILY SSF81301 533 821 1.7E-89 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Gene3D G3DSA:3.30.460.10 117 290 6.9E-60 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Gene3D G3DSA:3.30.460.10 644 817 7.4E-59 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Gene3D G3DSA:1.20.120.330 818 949 3.3E-38 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 SUPERFAMILY SSF81593 293 442 4.08E-43 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Gene3D G3DSA:1.20.120.330 291 446 4.2E-48 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Pfam PF08335 GlnD PII-uridylyltransferase 831 921 3.4E-13 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Pfam PF08335 GlnD PII-uridylyltransferase 303 442 6.6E-45 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 33 946 19.527 T 28-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 SUPERFAMILY SSF81301 29 292 1.8E-90 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Gene3D G3DSA:1.10.4050.10 9 115 3.6E-15 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Gene3D G3DSA:1.10.4050.10 534 643 2.7E-20 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 SUPERFAMILY SSF81593 821 948 4.24E-34 T 28-03-2018 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 38 279 8.1E-94 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DDI_RS15600 471a502cf3e0ade894ed85dfde75b605 949 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 559 811 1.3E-99 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DDI_RS17945 696bc46ed4380db99850018e65302063 458 SUPERFAMILY SSF51735 232 376 2.52E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17945 696bc46ed4380db99850018e65302063 458 Pfam PF02080 TrkA-C domain 158 225 1.1E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS17945 696bc46ed4380db99850018e65302063 458 Pfam PF02080 TrkA-C domain 392 451 3.6E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS17945 696bc46ed4380db99850018e65302063 458 Gene3D G3DSA:3.30.70.1450 140 232 1.4E-14 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS17945 696bc46ed4380db99850018e65302063 458 Gene3D G3DSA:3.40.50.720 2 139 1.5E-26 T 28-03-2018 DDI_RS17945 696bc46ed4380db99850018e65302063 458 Gene3D G3DSA:3.40.50.720 233 366 6.8E-22 T 28-03-2018 DDI_RS17945 696bc46ed4380db99850018e65302063 458 SUPERFAMILY SSF116726 148 226 3.01E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS17945 696bc46ed4380db99850018e65302063 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.8E-32 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDI_RS17945 696bc46ed4380db99850018e65302063 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.8E-32 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDI_RS17945 696bc46ed4380db99850018e65302063 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.8E-32 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDI_RS17945 696bc46ed4380db99850018e65302063 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.8E-32 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDI_RS17945 696bc46ed4380db99850018e65302063 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.8E-32 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDI_RS17945 696bc46ed4380db99850018e65302063 458 SUPERFAMILY SSF51735 1 152 1.06E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17945 696bc46ed4380db99850018e65302063 458 Gene3D G3DSA:3.30.70.1450 367 454 1.2E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS17945 696bc46ed4380db99850018e65302063 458 Pfam PF02254 TrkA-N domain 235 350 1.1E-23 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DDI_RS17945 696bc46ed4380db99850018e65302063 458 Pfam PF02254 TrkA-N domain 3 125 1.1E-29 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DDI_RS17945 696bc46ed4380db99850018e65302063 458 SUPERFAMILY SSF116726 391 440 1.96E-7 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS04095 0f217bb3b08e36fc3ad41cc2eb29e436 368 Gene3D G3DSA:3.20.20.210 2 368 2.1E-100 T 28-03-2018 DDI_RS04095 0f217bb3b08e36fc3ad41cc2eb29e436 368 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 12 365 1.1E-15 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS04095 0f217bb3b08e36fc3ad41cc2eb29e436 368 SUPERFAMILY SSF51726 10 368 3.4E-80 T 28-03-2018 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 Pfam PF07650 KH domain 38 111 4.6E-19 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 Gene3D G3DSA:3.30.1140.32 108 207 3.4E-40 T 28-03-2018 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 SUPERFAMILY SSF54814 2 106 1.07E-37 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.377 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 Gene3D G3DSA:3.30.300.20 17 107 1.3E-27 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.1E-100 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.1E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18065 770a860aa8c4554031eadae7b3c860b0 233 SMART SM00322 60 125 2.1E-6 T 28-03-2018 IPR004087 K Homology domain GO:0003676 DDI_RS13075 2a516e73b477ce192e88696ac90a7ca1 395 SUPERFAMILY SSF56322 18 387 2.35E-93 T 28-03-2018 IPR005801 ADC synthase GO:0009058 DDI_RS13075 2a516e73b477ce192e88696ac90a7ca1 395 Pfam PF00425 chorismate binding enzyme 123 377 2.6E-72 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DDI_RS13075 2a516e73b477ce192e88696ac90a7ca1 395 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 107 384 1.9E-88 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 DDI_RS13075 2a516e73b477ce192e88696ac90a7ca1 395 Gene3D G3DSA:3.60.120.10 2 388 5.5E-100 T 28-03-2018 IPR005801 ADC synthase GO:0009058 DDI_RS20450 f12668d0a30703c675b49417f439a547 435 Pfam PF07690 Major Facilitator Superfamily 24 383 1.1E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS20450 f12668d0a30703c675b49417f439a547 435 Gene3D G3DSA:1.20.1250.20 230 429 1.4E-19 T 28-03-2018 DDI_RS20450 f12668d0a30703c675b49417f439a547 435 SUPERFAMILY SSF103473 9 422 1.44E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS20450 f12668d0a30703c675b49417f439a547 435 Gene3D G3DSA:1.20.1250.20 1 229 5.6E-26 T 28-03-2018 DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 PRINTS PR00160 Glutaredoxin signature 173 191 7.6E-14 T 28-03-2018 IPR014025 Glutaredoxin subgroup DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 PRINTS PR00160 Glutaredoxin signature 214 227 7.6E-14 T 28-03-2018 IPR014025 Glutaredoxin subgroup DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 PRINTS PR00160 Glutaredoxin signature 228 241 7.6E-14 T 28-03-2018 IPR014025 Glutaredoxin subgroup DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 Pfam PF00462 Glutaredoxin 173 231 2.8E-19 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 7.5E-39 T 28-03-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 Pfam PF08534 Redoxin 5 160 3.8E-33 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 SUPERFAMILY SSF52833 4 241 7.58E-46 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 Gene3D G3DSA:3.40.30.10 172 242 7.9E-21 T 28-03-2018 DDI_RS19050 b150bd8b2ff78302d9cf16d92fbd9659 243 Gene3D G3DSA:3.40.30.10 3 163 7.1E-27 T 28-03-2018 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 935 0.0 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 6.2E-229 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 Gene3D G3DSA:3.40.50.620 2 630 1.5E-131 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 SUPERFAMILY SSF50677 191 365 7.19E-57 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 9.5E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 9.5E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 9.5E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 9.5E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 9.5E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 Gene3D G3DSA:1.10.287.380 882 952 1.1E-21 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 954 16.189 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 SUPERFAMILY SSF47323 642 904 5.23E-69 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 Gene3D G3DSA:1.10.730.10 631 821 9.8E-56 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 SUPERFAMILY SSF52374 364 571 1.04E-135 T 28-03-2018 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 SUPERFAMILY SSF52374 1 192 1.04E-135 T 28-03-2018 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 SUPERFAMILY SSF52374 609 641 1.04E-135 T 28-03-2018 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 Pfam PF08264 Anticodon-binding domain of tRNA 679 828 6.0E-44 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 892 949 6.7E-15 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DDI_RS00775 ad6262e864adf90587a56914b7c2654a 956 SUPERFAMILY SSF46589 889 953 1.99E-14 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 Gene3D G3DSA:3.40.50.300 183 360 1.6E-25 T 28-03-2018 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 Gene3D G3DSA:1.10.8.60 361 438 4.4E-20 T 28-03-2018 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 Pfam PF01590 GAF domain 23 158 1.0E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 SUPERFAMILY SSF55781 22 169 4.36E-18 T 28-03-2018 IPR029016 GAF domain-like DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 SMART SM00382 208 351 4.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 Gene3D G3DSA:3.30.450.40 5 172 2.0E-19 T 28-03-2018 IPR029016 GAF domain-like DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 Pfam PF00158 Sigma-54 interaction domain 189 354 1.3E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 Gene3D G3DSA:1.10.10.60 439 508 2.1E-9 T 28-03-2018 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 SUPERFAMILY SSF52540 187 420 2.44E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 SMART SM00065 20 167 4.4E-13 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS03110 efaa93b6b0aeededcef3b3d4a8ccb355 508 SUPERFAMILY SSF46689 458 507 1.39E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS10535 ee5773f992189451b393af6fdfaf8890 125 PIRSF PIRSF018297 1 125 6.5E-37 T 28-03-2018 IPR006440 Death on curing protein GO:0016301 DDI_RS10535 ee5773f992189451b393af6fdfaf8890 125 Pfam PF02661 Fic/DOC family 4 84 2.2E-9 T 28-03-2018 IPR003812 Fido domain DDI_RS10535 ee5773f992189451b393af6fdfaf8890 125 SUPERFAMILY SSF140931 4 91 2.62E-8 T 28-03-2018 IPR003812 Fido domain DDI_RS10535 ee5773f992189451b393af6fdfaf8890 125 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 5 120 8.9E-28 T 28-03-2018 IPR006440 Death on curing protein GO:0016301 DDI_RS10535 ee5773f992189451b393af6fdfaf8890 125 Gene3D G3DSA:1.10.3290.10 10 123 3.2E-11 T 28-03-2018 IPR003812 Fido domain DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 SUPERFAMILY SSF52156 682 811 1.31E-38 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Gene3D G3DSA:3.30.56.50 330 371 2.0E-9 T 28-03-2018 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Gene3D G3DSA:3.30.56.50 4 45 1.5E-10 T 28-03-2018 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 SUPERFAMILY SSF46955 3 50 9.7E-13 T 28-03-2018 IPR009061 Putative DNA-binding domain DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Gene3D G3DSA:3.40.50.10050 708 783 1.0E-26 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Gene3D G3DSA:2.40.30.10 577 707 9.8E-29 T 28-03-2018 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Pfam PF11987 Translation-initiation factor 2 689 794 9.8E-38 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 95 1.5E-16 T 28-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 SUPERFAMILY SSF50447 805 902 2.08E-34 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Gene3D G3DSA:3.40.50.300 399 575 3.6E-40 T 28-03-2018 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 320 904 1.4E-293 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 ProSitePatterns PS01176 Initiation factor 2 signature. 855 877 - T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 SUPERFAMILY SSF50447 578 659 3.76E-22 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 SUPERFAMILY SSF52540 399 572 4.83E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 407 562 7.3E-33 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Gene3D G3DSA:2.40.30.10 805 903 2.6E-31 T 28-03-2018 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 902 17.742 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Pfam PF00009 Elongation factor Tu GTP binding domain 408 565 2.9E-35 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 7.7E-9 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal DDI_RS02145 09ec40e22523fe9569993a70fb407030 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 328 378 2.2E-14 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 PIRSF PIRSF000141 1 416 1.8E-147 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 41.614 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 Pfam PF00890 FAD binding domain 4 399 2.4E-51 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 SUPERFAMILY SSF51905 85 123 1.93E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 SUPERFAMILY SSF51905 1 47 1.93E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 SUPERFAMILY SSF51905 376 414 1.93E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 SUPERFAMILY SSF51905 199 343 1.93E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 Gene3D G3DSA:3.50.50.60 1 415 2.2E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18610 eaf31c873a4ae58eb1f40ea689cb12a1 416 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 412 5.7E-151 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 Pfam PF02887 Pyruvate kinase, alpha/beta domain 352 453 9.2E-9 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 PRINTS PR01050 Pyruvate kinase family signature 234 258 1.3E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 PRINTS PR01050 Pyruvate kinase family signature 179 193 1.3E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 PRINTS PR01050 Pyruvate kinase family signature 303 319 1.3E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 PRINTS PR01050 Pyruvate kinase family signature 259 283 1.3E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 PRINTS PR01050 Pyruvate kinase family signature 55 71 1.3E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 PRINTS PR01050 Pyruvate kinase family signature 207 233 1.3E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 PRINTS PR01050 Pyruvate kinase family signature 284 302 1.3E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 Gene3D G3DSA:3.40.1380.20 312 459 4.3E-20 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 455 4.6E-120 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 SUPERFAMILY SSF51621 149 330 3.84E-78 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 SUPERFAMILY SSF51621 2 70 3.84E-78 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 SUPERFAMILY SSF52935 313 457 5.04E-11 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 SUPERFAMILY SSF50800 67 158 1.08E-18 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 Pfam PF00224 Pyruvate kinase, barrel domain 2 331 1.7E-94 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 Gene3D G3DSA:3.20.20.60 164 311 1.8E-51 T 28-03-2018 DDI_RS14385 2c951a16b8d37de410bb9f0e7ff9a657 477 Gene3D G3DSA:3.20.20.60 2 163 4.6E-25 T 28-03-2018 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 SUPERFAMILY SSF56024 274 473 8.75E-48 T 28-03-2018 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 Pfam PF13091 PLD-like domain 134 267 1.6E-12 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 Pfam PF13091 PLD-like domain 329 442 3.0E-21 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.016 T 28-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 SMART SM00155 219 246 7.3E-5 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 SMART SM00155 399 426 3.3E-5 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 6.9E-193 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 1.5E-7 T 28-03-2018 IPR027379 Cardiolipin synthase N-terminal DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 Gene3D G3DSA:3.30.870.10 113 307 1.8E-25 T 28-03-2018 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 SUPERFAMILY SSF56024 65 315 2.62E-47 T 28-03-2018 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 PIRSF PIRSF000850 108 184 21.0 T 28-03-2018 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 PIRSF PIRSF000850 307 376 0.0034 T 28-03-2018 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 PIRSF PIRSF000850 386 455 0.27 T 28-03-2018 DDI_RS09055 f3340a3f32a4c1aee95bec410054e69c 486 Gene3D G3DSA:3.30.870.10 316 476 2.2E-27 T 28-03-2018 DDI_RS13705 700ffa23fe63e7fa240bf6cc7afdd878 272 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 268 3.7E-96 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DDI_RS13705 700ffa23fe63e7fa240bf6cc7afdd878 272 SUPERFAMILY SSF53613 5 272 2.96E-74 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS13705 700ffa23fe63e7fa240bf6cc7afdd878 272 Pfam PF08543 Phosphomethylpyrimidine kinase 13 266 2.4E-89 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DDI_RS13705 700ffa23fe63e7fa240bf6cc7afdd878 272 Gene3D G3DSA:3.40.1190.20 1 272 2.3E-60 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS18495 0809c8a5bab9919b00f8d3d07f945817 720 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 97 683 3.9E-217 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 DDI_RS18495 0809c8a5bab9919b00f8d3d07f945817 720 Pfam PF02446 4-alpha-glucanotransferase 146 663 1.2E-127 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 DDI_RS18495 0809c8a5bab9919b00f8d3d07f945817 720 SUPERFAMILY SSF51445 138 569 3.01E-143 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS18495 0809c8a5bab9919b00f8d3d07f945817 720 SUPERFAMILY SSF51445 607 680 3.01E-143 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS18495 0809c8a5bab9919b00f8d3d07f945817 720 Gene3D G3DSA:3.20.20.80 135 683 1.6E-157 T 28-03-2018 DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 Gene3D G3DSA:2.60.40.420 347 471 2.7E-14 T 28-03-2018 IPR008972 Cupredoxin DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 21 0.0014 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 Gene3D G3DSA:2.60.40.420 168 297 6.3E-25 T 28-03-2018 IPR008972 Cupredoxin DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 SUPERFAMILY SSF49503 320 465 2.57E-16 T 28-03-2018 IPR008972 Cupredoxin DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 Gene3D G3DSA:2.60.40.420 28 164 1.1E-21 T 28-03-2018 IPR008972 Cupredoxin DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 Pfam PF07731 Multicopper oxidase 360 466 1.1E-12 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 468 56.547 T 28-03-2018 IPR026589 Cell division protein FtsP GO:0043093 DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 SUPERFAMILY SSF49503 3 165 3.7E-26 T 28-03-2018 IPR008972 Cupredoxin DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 SUPERFAMILY SSF49503 172 307 2.29E-30 T 28-03-2018 IPR008972 Cupredoxin DDI_RS00480 7b2a64750febbb5ad16b6eb7343b720d 472 Pfam PF07732 Multicopper oxidase 52 166 2.4E-25 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 Gene3D G3DSA:3.30.70.890 206 381 3.5E-57 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 Pfam PF08544 GHMP kinases C terminal 279 358 9.6E-11 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 Gene3D G3DSA:3.30.230.10 1 205 8.1E-60 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 Hamap MF_00246 Galactokinase [galK]. 25 381 43.587 T 28-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 Pfam PF00288 GHMP kinases N terminal domain 114 181 1.3E-15 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 Pfam PF10509 Galactokinase galactose-binding signature 11 58 6.0E-22 T 28-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 1.3E-45 T 28-03-2018 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 1.3E-45 T 28-03-2018 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 1.3E-45 T 28-03-2018 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 1.3E-45 T 28-03-2018 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 SUPERFAMILY SSF55060 205 381 3.04E-51 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 SUPERFAMILY SSF54211 5 203 1.75E-64 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 28-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PRINTS PR00473 Galactokinase signature 92 103 2.0E-29 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PRINTS PR00473 Galactokinase signature 112 130 2.0E-29 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PRINTS PR00473 Galactokinase signature 27 45 2.0E-29 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PRINTS PR00473 Galactokinase signature 263 277 2.0E-29 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 1.2E-153 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 PIRSF PIRSF000530 2 383 2.7E-121 T 28-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDI_RS05245 1d8a49c0f3eca01ed8177693c158eec1 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DDI_RS16940 9d304f2ff8a0ce09117771e55b2e5389 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 265 4.9E-79 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DDI_RS16940 9d304f2ff8a0ce09117771e55b2e5389 272 SUPERFAMILY SSF53335 17 265 6.94E-76 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS16940 9d304f2ff8a0ce09117771e55b2e5389 272 Gene3D G3DSA:1.10.8.100 210 270 7.4E-19 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DDI_RS16940 9d304f2ff8a0ce09117771e55b2e5389 272 SMART SM00650 25 198 3.3E-80 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DDI_RS16940 9d304f2ff8a0ce09117771e55b2e5389 272 Gene3D G3DSA:3.40.50.150 2 209 9.4E-54 T 28-03-2018 DDI_RS16940 9d304f2ff8a0ce09117771e55b2e5389 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.328 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DDI_RS16940 9d304f2ff8a0ce09117771e55b2e5389 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 263 2.8E-86 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DDI_RS16940 9d304f2ff8a0ce09117771e55b2e5389 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DDI_RS04685 f29d22bcf03e34d233249a38f75e2a0d 212 SUPERFAMILY SSF53328 2 200 1.14E-64 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS04685 f29d22bcf03e34d233249a38f75e2a0d 212 Gene3D G3DSA:3.40.50.170 1 198 4.6E-69 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS04685 f29d22bcf03e34d233249a38f75e2a0d 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS04685 f29d22bcf03e34d233249a38f75e2a0d 212 Pfam PF00551 Formyl transferase 2 182 2.6E-63 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS04685 f29d22bcf03e34d233249a38f75e2a0d 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.954 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DDI_RS04685 f29d22bcf03e34d233249a38f75e2a0d 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 190 1.4E-77 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 Gene3D G3DSA:3.40.960.10 1512 1633 1.8E-29 T 28-03-2018 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 Pfam PF13087 AAA domain 1287 1466 7.5E-10 T 28-03-2018 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 Gene3D G3DSA:3.40.50.300 312 1252 4.9E-41 T 28-03-2018 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 Pfam PF13195 Protein of unknown function (DUF4011) 27 201 6.2E-44 T 28-03-2018 IPR025103 Protein of unknown function DUF4011 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 Pfam PF11784 Protein of unknown function (DUF3320) 1676 1721 6.3E-16 T 28-03-2018 IPR021754 Protein of unknown function DUF3320 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 SUPERFAMILY SSF52540 314 379 3.17E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 SUPERFAMILY SSF52540 1196 1468 3.17E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 SUPERFAMILY SSF52540 439 499 3.17E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 Gene3D G3DSA:3.40.50.300 1294 1482 4.3E-14 T 28-03-2018 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 Pfam PF13086 AAA domain 1212 1252 2.4E-6 T 28-03-2018 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 Pfam PF13086 AAA domain 313 377 2.4E-6 T 28-03-2018 DDI_RS05605 50d8ec26043eca350baf540d1e6f4a99 1837 SUPERFAMILY SSF52980 1499 1614 8.04E-17 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 Gene3D G3DSA:1.10.10.10 12 76 4.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 PRINTS PR01467 Bacterial arginine repressor signature 126 141 3.8E-7 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 PRINTS PR01467 Bacterial arginine repressor signature 47 62 3.8E-7 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 PRINTS PR01467 Bacterial arginine repressor signature 30 43 3.8E-7 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 Pfam PF01316 Arginine repressor, DNA binding domain 17 77 7.0E-12 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 SUPERFAMILY SSF55252 88 156 1.57E-11 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 SUPERFAMILY SSF46785 10 77 1.27E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 Hamap MF_00173 Arginine repressor [argR]. 1 160 38.85 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 Pfam PF02863 Arginine repressor, C-terminal domain 89 153 7.8E-12 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DDI_RS00750 7968e7b9cfee6533f1b1a42f6222a91c 165 Gene3D G3DSA:3.30.1360.40 82 156 1.4E-14 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 DDI_RS09005 ca184ad8ac034730deece08ac7b06b54 199 Hamap MF_00124 Thymidine kinase [tdk]. 1 190 35.97 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DDI_RS09005 ca184ad8ac034730deece08ac7b06b54 199 SUPERFAMILY SSF52540 1 142 5.32E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09005 ca184ad8ac034730deece08ac7b06b54 199 Pfam PF00265 Thymidine kinase 2 187 6.6E-60 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DDI_RS09005 ca184ad8ac034730deece08ac7b06b54 199 Gene3D G3DSA:3.30.60.20 143 194 3.1E-18 T 28-03-2018 DDI_RS09005 ca184ad8ac034730deece08ac7b06b54 199 PIRSF PIRSF035805 1 194 1.4E-58 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DDI_RS09005 ca184ad8ac034730deece08ac7b06b54 199 Gene3D G3DSA:3.40.50.300 2 142 1.0E-45 T 28-03-2018 DDI_RS09005 ca184ad8ac034730deece08ac7b06b54 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 28-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DDI_RS09005 ca184ad8ac034730deece08ac7b06b54 199 SUPERFAMILY SSF57716 143 190 7.13E-17 T 28-03-2018 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.7E-40 T 28-03-2018 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.7E-40 T 28-03-2018 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.7E-40 T 28-03-2018 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.7E-40 T 28-03-2018 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 Gene3D G3DSA:3.40.50.261 120 290 2.5E-55 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 Pfam PF00549 CoA-ligase 151 271 1.8E-20 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 PIRSF PIRSF001553 1 290 1.4E-135 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.491 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 Pfam PF02629 CoA binding domain 6 99 8.2E-32 T 28-03-2018 IPR003781 CoA-binding GO:0048037 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 SUPERFAMILY SSF52210 123 287 2.75E-56 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 SUPERFAMILY SSF51735 1 122 2.46E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 Gene3D G3DSA:3.40.50.720 1 119 1.8E-46 T 28-03-2018 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 2.3E-147 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS05130 f7b427ed76d42c208a799c873672949f 290 SMART SM00881 4 100 2.7E-38 T 28-03-2018 IPR003781 CoA-binding GO:0048037 DDI_RS13830 5e5703b266f2c96820203976b093e893 335 Gene3D G3DSA:1.10.10.60 88 258 5.9E-5 T 28-03-2018 DDI_RS13830 5e5703b266f2c96820203976b093e893 335 SMART SM00342 247 329 2.8E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS13830 5e5703b266f2c96820203976b093e893 335 Gene3D G3DSA:1.10.260.40 259 282 0.053 T 28-03-2018 DDI_RS13830 5e5703b266f2c96820203976b093e893 335 Pfam PF12833 Helix-turn-helix domain 254 329 5.8E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS13830 5e5703b266f2c96820203976b093e893 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 202 2.5E-34 T 28-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DDI_RS13830 5e5703b266f2c96820203976b093e893 335 SUPERFAMILY SSF46689 283 332 1.16E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS13830 5e5703b266f2c96820203976b093e893 335 Gene3D G3DSA:1.10.10.60 283 335 2.6E-9 T 28-03-2018 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 3.0E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 3.0E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 Gene3D G3DSA:3.40.50.300 1 166 2.6E-40 T 28-03-2018 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 Gene3D G3DSA:1.20.272.10 243 363 2.7E-15 T 28-03-2018 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 SMART SM00382 37 178 1.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 4.7E-133 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 SUPERFAMILY SSF48019 243 367 1.51E-35 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 363 5.4E-33 T 28-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.7E-42 T 28-03-2018 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 442 524 5.8E-22 T 28-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 SUPERFAMILY SSF52540 35 222 1.08E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 526 667 2.6E-58 T 28-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS04425 4a9ed53ece663f6b9db53c2759a3d5ad 670 Gene3D G3DSA:1.10.8.60 167 242 2.1E-21 T 28-03-2018 DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.9E-10 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.9E-10 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 SMART SM00420 6 58 1.8E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 SMART SM01134 71 232 2.9E-56 T 28-03-2018 DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 7.4E-41 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 Gene3D G3DSA:3.40.50.1360 63 239 3.3E-36 T 28-03-2018 DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 Gene3D G3DSA:1.10.10.10 1 59 2.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 6.0E-16 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 SUPERFAMILY SSF46785 4 59 2.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 SUPERFAMILY SSF100950 73 228 4.71E-23 T 28-03-2018 DDI_RS08445 a7fb0f15e7221e7eea5b6f0e4c1fd7b6 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDI_RS20930 47419039b01faf8cce28ae3bb096974c 275 SUPERFAMILY SSF52540 2 242 2.43E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20930 47419039b01faf8cce28ae3bb096974c 275 Gene3D G3DSA:3.40.50.300 1 274 4.8E-59 T 28-03-2018 DDI_RS20930 47419039b01faf8cce28ae3bb096974c 275 SMART SM00382 30 237 6.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20930 47419039b01faf8cce28ae3bb096974c 275 Pfam PF00005 ABC transporter 25 180 3.6E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS09945 f1d1018e96dc3757b2291ce6517d27a0 430 SUPERFAMILY SSF53850 24 429 2.69E-66 T 28-03-2018 DDI_RS09945 f1d1018e96dc3757b2291ce6517d27a0 430 Pfam PF01547 Bacterial extracellular solute-binding protein 46 332 1.7E-26 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 DDI_RS09945 f1d1018e96dc3757b2291ce6517d27a0 430 Gene3D G3DSA:3.40.190.10 156 430 7.5E-31 T 28-03-2018 DDI_RS09945 f1d1018e96dc3757b2291ce6517d27a0 430 Gene3D G3DSA:3.40.190.10 27 155 8.7E-22 T 28-03-2018 DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 Gene3D G3DSA:1.10.10.10 1 82 5.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 Pfam PF03466 LysR substrate binding domain 88 293 7.9E-53 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 SUPERFAMILY SSF46785 1 86 9.12E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 Gene3D G3DSA:3.40.190.10 176 264 5.3E-27 T 28-03-2018 DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 SUPERFAMILY SSF53850 89 294 2.02E-45 T 28-03-2018 DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.5E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19045 6f65d32e64e764417c4cbd93ee681e24 305 Gene3D G3DSA:3.40.190.10 87 175 1.9E-21 T 28-03-2018 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 Gene3D G3DSA:3.90.226.10 9 317 5.1E-70 T 28-03-2018 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.7E-171 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 SUPERFAMILY SSF52096 5 318 4.02E-106 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 5.1E-64 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.746 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.8E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.8E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.8E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.8E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.8E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS03805 4b6d1f8bc4235dda92786283a281f027 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.8E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS02490 9a07d9545255811a82c3d082ff12fd6b 125 Pfam PF01638 HxlR-like helix-turn-helix 20 107 1.8E-26 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type DDI_RS02490 9a07d9545255811a82c3d082ff12fd6b 125 Gene3D G3DSA:1.10.10.10 17 118 9.2E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02490 9a07d9545255811a82c3d082ff12fd6b 125 SUPERFAMILY SSF46785 5 116 4.55E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 SMART SM00859 3 122 2.7E-25 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 366 2.5E-211 T 28-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 352 1.6E-56 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 PIRSF PIRSF000148 1 366 2.1E-69 T 28-03-2018 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 260 274 - T 28-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 3.3E-24 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 SUPERFAMILY SSF51735 1 147 1.83E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 Gene3D G3DSA:3.40.50.720 1 144 1.6E-18 T 28-03-2018 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 366 34.169 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 Gene3D G3DSA:3.30.360.10 145 349 1.9E-61 T 28-03-2018 DDI_RS18565 6c916696f68a0b20301c929e562ca3f4 366 SUPERFAMILY SSF55347 134 353 4.46E-76 T 28-03-2018 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 PIRSF PIRSF000813 1 408 1.1E-200 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 Pfam PF01966 HD domain 230 327 2.1E-8 T 28-03-2018 IPR006674 HD domain DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 Gene3D G3DSA:3.30.460.10 1 118 1.8E-29 T 28-03-2018 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 5.6E-13 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.591 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 SUPERFAMILY SSF81891 120 410 4.58E-54 T 28-03-2018 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 Gene3D G3DSA:1.10.3090.10 119 409 5.7E-55 T 28-03-2018 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.191 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 SUPERFAMILY SSF81301 2 119 9.81E-32 T 28-03-2018 DDI_RS15615 27f00671f96d06b6139d05da62e22ffa 415 Pfam PF01743 Poly A polymerase head domain 3 122 3.5E-19 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 SUPERFAMILY SSF51011 624 725 6.96E-34 T 28-03-2018 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 Gene3D G3DSA:3.20.20.80 233 634 2.3E-73 T 28-03-2018 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 SUPERFAMILY SSF51445 229 621 4.15E-116 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 SMART SM00642 247 606 1.7E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 3.7E-24 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 Gene3D G3DSA:2.60.40.10 112 223 2.4E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 Gene3D G3DSA:2.60.40.10 12 107 4.3E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 Pfam PF00128 Alpha amylase, catalytic domain 273 344 5.0E-9 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 3.3E-20 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 SUPERFAMILY SSF81296 117 222 3.5E-35 T 28-03-2018 IPR014756 Immunoglobulin E-set DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 Gene3D G3DSA:2.60.40.1180 635 726 5.4E-31 T 28-03-2018 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 6.3E-297 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.584 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 PIRSF PIRSF000463 6 727 2.0E-281 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 DDI_RS18545 ce9a67e06ac383dde75050dc7babd48e 727 SUPERFAMILY SSF81296 15 114 1.12E-16 T 28-03-2018 IPR014756 Immunoglobulin E-set DDI_RS03635 c91667deb1fc5b347d6de8d69b7d66d5 337 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 2.3E-47 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DDI_RS03635 c91667deb1fc5b347d6de8d69b7d66d5 337 SUPERFAMILY SSF52283 1 138 9.99E-20 T 28-03-2018 DDI_RS03635 c91667deb1fc5b347d6de8d69b7d66d5 337 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 320 6.8E-16 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 DDI_RS03635 c91667deb1fc5b347d6de8d69b7d66d5 337 Gene3D G3DSA:3.40.50.720 1 112 8.9E-26 T 28-03-2018 DDI_RS03635 c91667deb1fc5b347d6de8d69b7d66d5 337 SUPERFAMILY SSF51735 106 290 4.34E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS03635 c91667deb1fc5b347d6de8d69b7d66d5 337 Gene3D G3DSA:3.40.50.720 113 291 2.1E-46 T 28-03-2018 DDI_RS12855 8b32dfb3ab848330a33e5765e580ad08 276 Gene3D G3DSA:3.30.70.660 117 254 2.5E-36 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS12855 8b32dfb3ab848330a33e5765e580ad08 276 PIRSF PIRSF001430 13 269 4.9E-75 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS12855 8b32dfb3ab848330a33e5765e580ad08 276 Gene3D G3DSA:3.30.70.580 11 116 6.0E-35 T 28-03-2018 DDI_RS12855 8b32dfb3ab848330a33e5765e580ad08 276 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 13 255 34.946 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS12855 8b32dfb3ab848330a33e5765e580ad08 276 SUPERFAMILY SSF55120 14 268 2.73E-91 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS12855 8b32dfb3ab848330a33e5765e580ad08 276 Pfam PF01416 tRNA pseudouridine synthase 20 114 1.7E-10 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS12855 8b32dfb3ab848330a33e5765e580ad08 276 Pfam PF01416 tRNA pseudouridine synthase 156 256 1.6E-27 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS12855 8b32dfb3ab848330a33e5765e580ad08 276 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 14 250 5.9E-78 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 Gene3D G3DSA:3.30.470.20 205 444 6.7E-95 T 28-03-2018 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 Gene3D G3DSA:3.40.50.20 1 128 2.8E-51 T 28-03-2018 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 9.7E-85 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 SUPERFAMILY SSF52440 1 113 1.01E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 SUPERFAMILY SSF51246 331 444 5.18E-43 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 SMART SM00878 336 441 2.2E-63 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 Gene3D G3DSA:3.30.1490.20 129 202 1.4E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 8.2E-249 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.7E-44 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.0E-37 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 SUPERFAMILY SSF56059 83 347 1.48E-67 T 28-03-2018 DDI_RS00095 56967e7c5c9a80a45f1c0cac05aa5fad 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS03190 a5c6165ab636cf16f68e8bf47d07aa1d 349 Gene3D G3DSA:3.40.50.300 2 215 6.5E-64 T 28-03-2018 DDI_RS03190 a5c6165ab636cf16f68e8bf47d07aa1d 349 SMART SM00382 28 194 2.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS03190 a5c6165ab636cf16f68e8bf47d07aa1d 349 SUPERFAMILY SSF50331 211 334 4.54E-15 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS03190 a5c6165ab636cf16f68e8bf47d07aa1d 349 Pfam PF00005 ABC transporter 19 136 1.6E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS03190 a5c6165ab636cf16f68e8bf47d07aa1d 349 ProSitePatterns PS00211 ABC transporters family signature. 109 123 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS03190 a5c6165ab636cf16f68e8bf47d07aa1d 349 Gene3D G3DSA:2.40.50.100 274 335 1.1E-10 T 28-03-2018 DDI_RS03190 a5c6165ab636cf16f68e8bf47d07aa1d 349 SUPERFAMILY SSF52540 4 218 4.44E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 Gene3D G3DSA:3.30.70.920 71 164 2.2E-14 T 28-03-2018 DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 Pfam PF01037 Lrp/AsnC ligand binding domain 97 152 5.9E-11 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 SUPERFAMILY SSF54909 80 163 2.15E-12 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 SUPERFAMILY SSF46785 17 77 2.22E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 34 2.6E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 45 64 2.6E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 45 2.6E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 Pfam PF13404 AsnC-type helix-turn-helix domain 18 59 9.2E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 SMART SM00344 18 124 4.4E-36 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DDI_RS05655 f96eb2827a5d100fe2c27decdf15fd2a 166 Gene3D G3DSA:1.10.10.10 12 69 6.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09495 5ed43082235abb7f4c4cdf4c8b5123dd 374 SUPERFAMILY SSF53067 82 369 4.26E-32 T 28-03-2018 DDI_RS09495 5ed43082235abb7f4c4cdf4c8b5123dd 374 Pfam PF00480 ROK family 84 365 2.2E-22 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 DDI_RS09495 5ed43082235abb7f4c4cdf4c8b5123dd 374 Gene3D G3DSA:3.30.420.40 76 206 2.7E-16 T 28-03-2018 DDI_RS09495 5ed43082235abb7f4c4cdf4c8b5123dd 374 SUPERFAMILY SSF46785 11 74 9.66E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09495 5ed43082235abb7f4c4cdf4c8b5123dd 374 Gene3D G3DSA:1.10.10.10 10 75 4.7E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09495 5ed43082235abb7f4c4cdf4c8b5123dd 374 Gene3D G3DSA:3.30.420.40 207 374 1.5E-20 T 28-03-2018 DDI_RS12860 350ca0cf5f028e746a6787e8634f3deb 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 5.5E-36 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS12860 350ca0cf5f028e746a6787e8634f3deb 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 4.3E-24 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDI_RS12860 350ca0cf5f028e746a6787e8634f3deb 336 SUPERFAMILY SSF55347 132 318 8.93E-53 T 28-03-2018 DDI_RS12860 350ca0cf5f028e746a6787e8634f3deb 336 SMART SM00859 6 121 1.2E-31 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDI_RS12860 350ca0cf5f028e746a6787e8634f3deb 336 Gene3D G3DSA:3.40.50.720 1 143 4.5E-29 T 28-03-2018 DDI_RS12860 350ca0cf5f028e746a6787e8634f3deb 336 Gene3D G3DSA:3.30.360.10 144 313 6.9E-46 T 28-03-2018 DDI_RS12860 350ca0cf5f028e746a6787e8634f3deb 336 PIRSF PIRSF000148 4 336 2.8E-97 T 28-03-2018 DDI_RS12860 350ca0cf5f028e746a6787e8634f3deb 336 SUPERFAMILY SSF51735 5 157 1.24E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS01805 7e1ca9e4bff3d95af8e5173cd57125e7 144 SUPERFAMILY SSF158682 17 143 2.62E-17 T 28-03-2018 DDI_RS01805 7e1ca9e4bff3d95af8e5173cd57125e7 144 Gene3D G3DSA:1.10.3680.10 7 144 5.3E-19 T 28-03-2018 IPR029024 TerB-like DDI_RS01805 7e1ca9e4bff3d95af8e5173cd57125e7 144 Pfam PF05099 Tellurite resistance protein TerB 21 142 7.1E-16 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal DDI_RS03335 fa5cf83f27edf69ec139bc7671838779 315 Gene3D G3DSA:3.20.20.80 25 303 6.6E-47 T 28-03-2018 DDI_RS03335 fa5cf83f27edf69ec139bc7671838779 315 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 42 283 2.2E-53 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 DDI_RS03335 fa5cf83f27edf69ec139bc7671838779 315 SUPERFAMILY SSF51445 26 307 6.04E-79 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS03335 fa5cf83f27edf69ec139bc7671838779 315 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 150 159 - T 28-03-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 SUPERFAMILY SSF51064 137 193 1.12E-17 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 PRINTS PR00773 GrpE protein signature 89 104 4.1E-26 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 PRINTS PR00773 GrpE protein signature 61 77 4.1E-26 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 PRINTS PR00773 GrpE protein signature 171 190 4.1E-26 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 PRINTS PR00773 GrpE protein signature 144 159 4.1E-26 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 Gene3D G3DSA:3.90.20.20 32 135 7.7E-30 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 ProSitePatterns PS01071 grpE protein signature. 147 190 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 Gene3D G3DSA:2.30.22.10 136 192 2.3E-18 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 Hamap MF_01151 Protein GrpE [grpE]. 2 192 20.697 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 Pfam PF01025 GrpE 34 192 5.8E-47 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDI_RS02945 4b1ee1022dfbedfd5e2a6fd8aba55893 195 SUPERFAMILY SSF58014 45 136 1.7E-26 T 28-03-2018 DDI_RS11250 42f62ee0d6e35c50de1e75ef2444a463 217 PIRSF PIRSF000498 1 211 5.4E-72 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS11250 42f62ee0d6e35c50de1e75ef2444a463 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 204 5.4E-82 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS11250 42f62ee0d6e35c50de1e75ef2444a463 217 SUPERFAMILY SSF63380 1 93 2.72E-28 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS11250 42f62ee0d6e35c50de1e75ef2444a463 217 Pfam PF00677 Lumazine binding domain 100 185 4.4E-22 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS11250 42f62ee0d6e35c50de1e75ef2444a463 217 Pfam PF00677 Lumazine binding domain 3 87 9.3E-22 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS11250 42f62ee0d6e35c50de1e75ef2444a463 217 SUPERFAMILY SSF63380 93 199 7.91E-32 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS11250 42f62ee0d6e35c50de1e75ef2444a463 217 Gene3D G3DSA:2.40.30.20 94 208 8.5E-27 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS11250 42f62ee0d6e35c50de1e75ef2444a463 217 Gene3D G3DSA:2.40.30.20 1 93 1.6E-28 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 2.1E-126 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 PIRSF PIRSF001589 363 508 3.7E-28 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 PIRSF PIRSF001589 1 368 4.9E-112 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 Pfam PF00733 Asparagine synthase 211 366 1.1E-59 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 SUPERFAMILY SSF52402 206 483 6.42E-77 T 28-03-2018 DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 Gene3D G3DSA:3.60.20.10 2 193 1.1E-47 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 Gene3D G3DSA:3.40.50.620 194 514 9.2E-93 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 5.4E-42 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain DDI_RS04955 b20af73fe3d2d51f83084f232546dcdf 554 SUPERFAMILY SSF56235 1 196 2.66E-57 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS10855 75f6dffe88b1f0963789cdd40711a802 571 Pfam PF01740 STAS domain 461 558 8.3E-7 T 28-03-2018 IPR002645 STAS domain DDI_RS10855 75f6dffe88b1f0963789cdd40711a802 571 SUPERFAMILY SSF52091 458 560 4.32E-12 T 28-03-2018 IPR002645 STAS domain DDI_RS10855 75f6dffe88b1f0963789cdd40711a802 571 TIGRFAM TIGR00815 sulP: sulfate permease 18 557 1.2E-126 T 28-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 DDI_RS10855 75f6dffe88b1f0963789cdd40711a802 571 Gene3D G3DSA:3.30.750.24 445 562 4.0E-12 T 28-03-2018 IPR002645 STAS domain DDI_RS10855 75f6dffe88b1f0963789cdd40711a802 571 Pfam PF00916 Sulfate permease family 29 413 4.0E-80 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DDI_RS02785 94bf28f09b31caf78c8136f326c0ffde 344 Gene3D G3DSA:1.10.3470.10 29 333 2.3E-34 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS02785 94bf28f09b31caf78c8136f326c0ffde 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 331 6.5E-49 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS03895 f9ebe061a8a49fd35fa247ed61d65cb5 445 Gene3D G3DSA:1.20.1250.20 10 213 2.8E-12 T 28-03-2018 DDI_RS03895 f9ebe061a8a49fd35fa247ed61d65cb5 445 SUPERFAMILY SSF103473 40 432 1.2E-16 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS03895 f9ebe061a8a49fd35fa247ed61d65cb5 445 Pfam PF07690 Major Facilitator Superfamily 40 383 1.4E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 7.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 7.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 Gene3D G3DSA:1.20.120.530 90 240 7.6E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 Gene3D G3DSA:1.10.10.10 6 76 7.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 SMART SM00895 96 223 6.5E-19 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 SUPERFAMILY SSF48008 94 231 3.4E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 SMART SM00345 16 75 1.4E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 SUPERFAMILY SSF46785 9 79 2.98E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 Pfam PF07729 FCD domain 96 222 1.4E-22 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS15885 22033d5762eceb290a567b3f7ba978fe 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 5.0E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 SMART SM00387 255 365 4.0E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 SMART SM00388 148 208 3.6E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 362 5.6E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 Gene3D G3DSA:3.30.565.10 223 365 8.8E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 SUPERFAMILY SSF55874 198 361 5.37E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 Gene3D G3DSA:1.10.287.130 138 204 1.8E-10 T 28-03-2018 DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 307 9.7E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 342 9.7E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 Pfam PF00512 His Kinase A (phospho-acceptor) domain 151 207 5.7E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS18165 d56da8c732e04ccaa63535487fc50167 365 SUPERFAMILY SSF47384 132 206 2.94E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Gene3D G3DSA:1.10.8.60 652 757 5.7E-25 T 28-03-2018 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Gene3D G3DSA:1.10.8.60 350 436 1.7E-27 T 28-03-2018 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 2.9E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 5.3E-14 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 SUPERFAMILY SSF52540 436 730 6.67E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Gene3D G3DSA:1.10.1780.10 1 143 7.0E-29 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 2.2E-25 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 28-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 SMART SM01086 652 743 2.4E-35 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Gene3D G3DSA:3.40.50.300 164 349 8.7E-29 T 28-03-2018 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 SUPERFAMILY SSF81923 1 141 4.84E-59 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 SMART SM00382 205 350 7.2E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 SMART SM00382 486 635 1.5E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 SUPERFAMILY SSF52540 168 425 8.64E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Gene3D G3DSA:3.40.50.300 441 651 2.3E-43 T 28-03-2018 DDI_RS08065 d5e05aaa68b0c36f4150818e70334d55 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 644 6.9E-49 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS11715 d9fa6d56982ade564204e988065cd0e3 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 7.7E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS11715 d9fa6d56982ade564204e988065cd0e3 477 SUPERFAMILY SSF55604 401 474 7.98E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS11715 d9fa6d56982ade564204e988065cd0e3 477 Gene3D G3DSA:3.30.1360.60 399 474 2.1E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS11715 d9fa6d56982ade564204e988065cd0e3 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 2.2E-228 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 DDI_RS11715 d9fa6d56982ade564204e988065cd0e3 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 5.3E-83 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS11715 d9fa6d56982ade564204e988065cd0e3 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 4.6E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS11715 d9fa6d56982ade564204e988065cd0e3 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 2.0E-88 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 DDI_RS11715 d9fa6d56982ade564204e988065cd0e3 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS17410 fd915ef4bc83eee2318453edb46e3f53 231 SMART SM00796 18 216 4.0E-81 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DDI_RS17410 fd915ef4bc83eee2318453edb46e3f53 231 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 19 215 5.2E-58 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DDI_RS17410 fd915ef4bc83eee2318453edb46e3f53 231 SUPERFAMILY SSF160467 19 107 6.15E-11 T 28-03-2018 DDI_RS17410 fd915ef4bc83eee2318453edb46e3f53 231 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 24 225 8.2E-49 T 28-03-2018 IPR010016 KipI family DDI_RS17410 fd915ef4bc83eee2318453edb46e3f53 231 SUPERFAMILY SSF50891 103 228 3.49E-35 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS17410 fd915ef4bc83eee2318453edb46e3f53 231 Gene3D G3DSA:3.30.1360.40 7 96 2.7E-9 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 DDI_RS17410 fd915ef4bc83eee2318453edb46e3f53 231 Gene3D G3DSA:2.40.100.10 100 230 3.1E-38 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS06170 fd87e03da1ba6a3b24b32539006f3a38 267 SUPERFAMILY SSF52540 4 230 2.39E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06170 fd87e03da1ba6a3b24b32539006f3a38 267 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06170 fd87e03da1ba6a3b24b32539006f3a38 267 SMART SM00382 28 249 8.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06170 fd87e03da1ba6a3b24b32539006f3a38 267 Gene3D G3DSA:3.40.50.300 1 240 8.1E-57 T 28-03-2018 DDI_RS06170 fd87e03da1ba6a3b24b32539006f3a38 267 Pfam PF00005 ABC transporter 20 167 3.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07225 f6fa2fa65a4e00a3a15ed9392f2d47c1 368 Pfam PF12698 ABC-2 family transporter protein 25 359 3.2E-45 T 28-03-2018 DDI_RS07225 f6fa2fa65a4e00a3a15ed9392f2d47c1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.1E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 DDI_RS07225 f6fa2fa65a4e00a3a15ed9392f2d47c1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.1E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 DDI_RS07225 f6fa2fa65a4e00a3a15ed9392f2d47c1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.1E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 DDI_RS07225 f6fa2fa65a4e00a3a15ed9392f2d47c1 368 Gene3D G3DSA:3.40.1710.10 38 188 5.1E-21 T 28-03-2018 DDI_RS10430 ea7ff0d5e196bfb9d4c5df00de16efda 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 285 1.2E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10430 ea7ff0d5e196bfb9d4c5df00de16efda 289 Gene3D G3DSA:1.10.3720.10 25 286 1.4E-36 T 28-03-2018 DDI_RS10430 ea7ff0d5e196bfb9d4c5df00de16efda 289 SUPERFAMILY SSF161098 81 266 9.29E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS16220 2aa050b8dcba1c21e15cbc2aa9395536 101 SUPERFAMILY SSF46785 11 80 3.57E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16220 2aa050b8dcba1c21e15cbc2aa9395536 101 Gene3D G3DSA:1.10.10.10 2 80 9.3E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16220 2aa050b8dcba1c21e15cbc2aa9395536 101 Pfam PF09339 IclR helix-turn-helix domain 12 59 1.3E-5 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 28-03-2018 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 28-03-2018 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 Gene3D G3DSA:3.50.50.60 302 430 2.3E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 Gene3D G3DSA:3.50.50.60 3 294 2.7E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.4E-277 T 28-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 SUPERFAMILY SSF56425 236 356 4.78E-42 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 SUPERFAMILY SSF46977 452 588 4.97E-46 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 SUPERFAMILY SSF51905 5 259 2.98E-76 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 SUPERFAMILY SSF51905 359 440 2.98E-76 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 Gene3D G3DSA:4.10.80.40 541 588 4.9E-12 T 28-03-2018 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 PIRSF PIRSF000171 1 579 1.1E-46 T 28-03-2018 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 5.5E-36 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 Gene3D G3DSA:1.20.58.100 431 540 9.7E-36 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 Pfam PF00890 FAD binding domain 9 405 7.9E-119 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 2.9E-243 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05105 87bc3ee79a5786414f9569c62050714b 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS06595 9b0af6df54b338dcea997a0594966d00 143 Gene3D G3DSA:3.10.450.40 14 138 1.6E-21 T 28-03-2018 DDI_RS06595 9b0af6df54b338dcea997a0594966d00 143 Pfam PF04965 Gene 25-like lysozyme 34 122 2.3E-17 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DDI_RS06595 9b0af6df54b338dcea997a0594966d00 143 SUPERFAMILY SSF160719 31 136 1.15E-19 T 28-03-2018 DDI_RS06595 9b0af6df54b338dcea997a0594966d00 143 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 142 2.3E-39 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 3.6E-31 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 PIRSF PIRSF000349 1 208 1.6E-78 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.5E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 7.5E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 7.5E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 7.5E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.5E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 SUPERFAMILY SSF46609 1 90 5.76E-35 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 202 1.4E-40 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 Gene3D G3DSA:1.10.287.990 20 90 1.0E-30 T 28-03-2018 DDI_RS20615 ead8a5716f0f50bfc0e0b6510dce6622 208 SUPERFAMILY SSF54719 95 206 2.49E-44 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 Gene3D G3DSA:3.10.290.10 102 144 3.5E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 Gene3D G3DSA:1.10.1050.10 1 101 1.4E-41 T 28-03-2018 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 SMART SM00363 96 160 2.9E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 Pfam PF01479 S4 domain 97 143 2.3E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 SMART SM01390 3 95 4.1E-50 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 Gene3D G3DSA:1.10.1050.10 145 206 2.1E-18 T 28-03-2018 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 SUPERFAMILY SSF55174 3 206 1.57E-72 T 28-03-2018 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.189 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.7E-32 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DDI_RS17975 e2d1be4adb4f972b47b69fe4b44c830f 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.1E-85 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDI_RS19475 facb7013806c6bc68d4d6a583eb23194 834 PRINTS PR01440 Cellulose synthase subunit B signature 768 788 7.2E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 DDI_RS19475 facb7013806c6bc68d4d6a583eb23194 834 PRINTS PR01440 Cellulose synthase subunit B signature 146 167 7.2E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 DDI_RS19475 facb7013806c6bc68d4d6a583eb23194 834 PRINTS PR01440 Cellulose synthase subunit B signature 439 460 7.2E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 DDI_RS19475 facb7013806c6bc68d4d6a583eb23194 834 PRINTS PR01440 Cellulose synthase subunit B signature 568 587 7.2E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 DDI_RS19475 facb7013806c6bc68d4d6a583eb23194 834 PRINTS PR01440 Cellulose synthase subunit B signature 357 378 7.2E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 DDI_RS19475 facb7013806c6bc68d4d6a583eb23194 834 PRINTS PR01440 Cellulose synthase subunit B signature 520 539 7.2E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 DDI_RS19475 facb7013806c6bc68d4d6a583eb23194 834 PRINTS PR01440 Cellulose synthase subunit B signature 277 300 7.2E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 DDI_RS19475 facb7013806c6bc68d4d6a583eb23194 834 Pfam PF03170 Bacterial cellulose synthase subunit 120 727 1.1E-192 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 DDI_RS13385 ab637d42ef6514fd817c1d87a7083374 121 Gene3D G3DSA:1.10.10.10 1 121 3.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS13385 ab637d42ef6514fd817c1d87a7083374 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 1.9E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS13385 ab637d42ef6514fd817c1d87a7083374 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 31 47 1.9E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS13385 ab637d42ef6514fd817c1d87a7083374 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 63 1.9E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS13385 ab637d42ef6514fd817c1d87a7083374 121 SMART SM00347 7 105 6.5E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS13385 ab637d42ef6514fd817c1d87a7083374 121 Pfam PF01047 MarR family 14 72 3.3E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS13385 ab637d42ef6514fd817c1d87a7083374 121 SUPERFAMILY SSF46785 3 115 1.28E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17535 836eaa8045b07d927dd1922b6e114a88 267 SUPERFAMILY SSF109998 32 157 1.29E-10 T 28-03-2018 IPR027304 Trigger factor/SurA domain DDI_RS17535 836eaa8045b07d927dd1922b6e114a88 267 Pfam PF00639 PPIC-type PPIASE domain 141 230 9.1E-19 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 DDI_RS17535 836eaa8045b07d927dd1922b6e114a88 267 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 171 191 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DDI_RS17535 836eaa8045b07d927dd1922b6e114a88 267 SUPERFAMILY SSF54534 127 229 5.1E-25 T 28-03-2018 DDI_RS17535 836eaa8045b07d927dd1922b6e114a88 267 Gene3D G3DSA:3.10.50.40 126 257 1.7E-24 T 28-03-2018 DDI_RS17535 836eaa8045b07d927dd1922b6e114a88 267 TIGRFAM TIGR02933 nifM_nitrog: nitrogen fixation protein NifM 14 267 1.7E-97 T 28-03-2018 IPR014282 Nitrogen fixation protein NifM DDI_RS21190 781381237e208585271e13479939cfb9 200 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 51 188 3.0E-75 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 DDI_RS21190 781381237e208585271e13479939cfb9 200 Gene3D G3DSA:2.40.160.20 43 200 5.8E-61 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS21190 781381237e208585271e13479939cfb9 200 SUPERFAMILY SSF56925 41 200 5.18E-81 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS21190 781381237e208585271e13479939cfb9 200 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 200 42.307 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 DDI_RS21190 781381237e208585271e13479939cfb9 200 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 52 197 7.2E-66 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 1.4E-65 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.3E-28 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.3E-28 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.3E-28 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.3E-28 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.3E-28 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 Gene3D G3DSA:3.30.390.30 332 450 1.0E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 5.0E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PIRSF PIRSF000350 1 447 1.9E-85 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 SUPERFAMILY SSF55424 336 450 2.92E-36 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 3.3E-67 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 SUPERFAMILY SSF51905 5 371 2.1E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 Gene3D G3DSA:3.50.50.60 1 165 9.2E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 Gene3D G3DSA:3.40.50.720 166 331 1.5E-35 T 28-03-2018 DDI_RS20380 5ae996dd1afe813c92165f5e773a755f 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 3.0E-214 T 28-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 DDI_RS21120 631dd595ff96a0913f92bc5d2448f088 374 Gene3D G3DSA:3.40.50.2000 3 181 1.6E-19 T 28-03-2018 DDI_RS21120 631dd595ff96a0913f92bc5d2448f088 374 Pfam PF00534 Glycosyl transferases group 1 190 347 1.0E-33 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 DDI_RS21120 631dd595ff96a0913f92bc5d2448f088 374 Gene3D G3DSA:3.40.50.2000 182 352 1.1E-48 T 28-03-2018 DDI_RS21120 631dd595ff96a0913f92bc5d2448f088 374 SUPERFAMILY SSF53756 8 366 2.6E-75 T 28-03-2018 DDI_RS21120 631dd595ff96a0913f92bc5d2448f088 374 Pfam PF13439 Glycosyltransferase Family 4 17 173 3.6E-17 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 DDI_RS10970 665f8ecbfc33ba75c947df507ef78aa8 543 Gene3D G3DSA:3.90.76.10 49 209 5.5E-38 T 28-03-2018 DDI_RS10970 665f8ecbfc33ba75c947df507ef78aa8 543 SUPERFAMILY SSF53850 37 533 6.02E-134 T 28-03-2018 DDI_RS10970 665f8ecbfc33ba75c947df507ef78aa8 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 459 2.2E-82 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS10970 665f8ecbfc33ba75c947df507ef78aa8 543 Gene3D G3DSA:3.10.105.10 307 512 1.9E-56 T 28-03-2018 DDI_RS10970 665f8ecbfc33ba75c947df507ef78aa8 543 Gene3D G3DSA:3.40.190.10 210 306 2.1E-21 T 28-03-2018 DDI_RS10970 665f8ecbfc33ba75c947df507ef78aa8 543 PIRSF PIRSF002741 3 543 4.0E-112 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 3.3E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 SMART SM00387 345 455 2.8E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 Gene3D G3DSA:1.10.287.130 228 296 1.8E-15 T 28-03-2018 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 157 2.9E-10 T 28-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 SUPERFAMILY SSF158472 184 236 1.96E-5 T 28-03-2018 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 Pfam PF00672 HAMP domain 184 234 1.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 SMART SM00304 184 237 2.3E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 SMART SM00388 238 300 9.6E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 SUPERFAMILY SSF47384 224 298 2.35E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 Gene3D G3DSA:3.30.565.10 303 456 1.6E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 SUPERFAMILY SSF55874 289 453 3.41E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.5E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 1.5E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.5E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.5E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19220 5c9ca0237e7c3d079495dc30df95d170 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 4.9E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 Pfam PF01494 FAD binding domain 153 346 3.3E-22 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 2.8E-132 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 SUPERFAMILY SSF51905 4 177 1.15E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 SUPERFAMILY SSF51905 268 385 1.15E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 Gene3D G3DSA:3.50.50.60 1 365 1.4E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.0E-19 T 28-03-2018 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 4.0E-19 T 28-03-2018 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 4.0E-19 T 28-03-2018 DDI_RS01185 eef0eac6089c6273ee96811f71476946 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 4.0E-19 T 28-03-2018 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PIRSF PIRSF000207 1 606 7.5E-273 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 SUPERFAMILY SSF63380 235 453 1.04E-64 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 Gene3D G3DSA:3.40.50.360 52 226 5.5E-37 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 606 1.1E-269 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 Pfam PF00258 Flavodoxin 72 194 7.8E-30 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 SUPERFAMILY SSF52343 451 606 4.06E-51 T 28-03-2018 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 Gene3D G3DSA:2.40.30.10 227 445 7.3E-48 T 28-03-2018 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 SUPERFAMILY SSF52218 67 214 3.14E-42 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 Pfam PF00175 Oxidoreductase NAD-binding domain 464 570 1.5E-20 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00369 Flavodoxin signature 70 83 2.3E-14 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00369 Flavodoxin signature 150 160 2.3E-14 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00369 Flavodoxin signature 174 193 2.3E-14 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00369 Flavodoxin signature 118 129 2.3E-14 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 Gene3D G3DSA:3.40.50.80 449 605 2.6E-36 T 28-03-2018 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 606 51.472 T 28-03-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 426 435 3.2E-29 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 555 563 3.2E-29 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 277 287 3.2E-29 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 393 400 3.2E-29 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 463 482 3.2E-29 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 501 512 3.2E-29 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 532 548 3.2E-29 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 488 497 3.2E-29 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS15460 621d501d73060a0d0c34630b5a02b6ac 606 Pfam PF00667 FAD binding domain 237 431 4.2E-24 T 28-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 DDI_RS04575 08c9fa0d1be248958d5ebeaedb3d0b61 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 2.8E-150 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 DDI_RS04575 08c9fa0d1be248958d5ebeaedb3d0b61 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 56.029 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 DDI_RS04575 08c9fa0d1be248958d5ebeaedb3d0b61 285 SUPERFAMILY SSF52096 24 280 2.56E-79 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS04575 08c9fa0d1be248958d5ebeaedb3d0b61 285 Gene3D G3DSA:1.10.12.10 225 273 6.4E-14 T 28-03-2018 IPR014748 Crontonase, C-terminal DDI_RS04575 08c9fa0d1be248958d5ebeaedb3d0b61 285 Gene3D G3DSA:3.90.226.10 9 224 3.4E-64 T 28-03-2018 DDI_RS04575 08c9fa0d1be248958d5ebeaedb3d0b61 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 279 1.8E-80 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 DDI_RS04575 08c9fa0d1be248958d5ebeaedb3d0b61 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 Gene3D G3DSA:3.50.30.10 146 245 9.4E-28 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.8E-255 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.7E-29 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 SUPERFAMILY SSF51621 251 549 3.4E-110 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 Gene3D G3DSA:1.10.274.10 24 145 3.4E-34 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 SUPERFAMILY SSF47831 23 143 3.92E-33 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 SUPERFAMILY SSF52009 125 246 1.83E-36 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 223 4.1E-23 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 2.1E-124 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 PIRSF PIRSF000732 1 574 1.0E-218 T 28-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 5.9E-31 T 28-03-2018 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 5.9E-31 T 28-03-2018 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 5.9E-31 T 28-03-2018 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 5.9E-31 T 28-03-2018 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DDI_RS03050 89f0f197b6869a79b205e4b15034a196 575 Gene3D G3DSA:3.20.20.60 250 573 3.6E-104 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 4.0E-14 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 PIRSF PIRSF000144 541 691 0.02 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 PIRSF PIRSF000144 53 438 1.1E-54 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Pfam PF00384 Molybdopterin oxidoreductase 61 485 5.6E-94 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 6 683 2.0E-280 T 28-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Gene3D G3DSA:3.40.50.740 61 163 1.9E-23 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 SUPERFAMILY SSF53706 1 561 1.16E-194 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Gene3D G3DSA:3.40.50.740 258 535 5.7E-77 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 SUPERFAMILY SSF50692 564 701 2.49E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Gene3D G3DSA:1.20.5.460 689 712 1.5E-12 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Pfam PF01568 Molydopterin dinucleotide binding domain 574 681 1.8E-29 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Gene3D G3DSA:2.40.40.20 536 686 1.7E-38 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 SMART SM00926 1 54 1.2E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Gene3D G3DSA:2.20.25.90 1 55 2.3E-16 T 28-03-2018 DDI_RS05845 786091d78948755e6ea036f0e3665ba2 716 Gene3D G3DSA:3.40.228.10 164 257 2.9E-26 T 28-03-2018 DDI_RS04850 202a1547338c634d2794fdc3f5f651cb 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 332 5.9E-102 T 28-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DDI_RS04850 202a1547338c634d2794fdc3f5f651cb 343 SUPERFAMILY SSF48019 212 335 7.99E-36 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DDI_RS04850 202a1547338c634d2794fdc3f5f651cb 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 2.8E-41 T 28-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DDI_RS04850 202a1547338c634d2794fdc3f5f651cb 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 2.2E-71 T 28-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS04850 202a1547338c634d2794fdc3f5f651cb 343 SUPERFAMILY SSF52540 1 210 1.3E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04850 202a1547338c634d2794fdc3f5f651cb 343 Gene3D G3DSA:3.40.50.300 1 140 6.4E-19 T 28-03-2018 DDI_RS04850 202a1547338c634d2794fdc3f5f651cb 343 Gene3D G3DSA:1.10.8.60 143 222 9.8E-23 T 28-03-2018 DDI_RS04850 202a1547338c634d2794fdc3f5f651cb 343 Gene3D G3DSA:1.20.272.10 223 343 1.7E-26 T 28-03-2018 DDI_RS16660 66d02f54d54ebd2fd01b3e7dc0423033 346 SUPERFAMILY SSF51412 6 334 1.16E-98 T 28-03-2018 DDI_RS16660 66d02f54d54ebd2fd01b3e7dc0423033 346 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DDI_RS16660 66d02f54d54ebd2fd01b3e7dc0423033 346 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 7.3E-196 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 DDI_RS16660 66d02f54d54ebd2fd01b3e7dc0423033 346 PIRSF PIRSF000235 1 346 4.8E-195 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 DDI_RS16660 66d02f54d54ebd2fd01b3e7dc0423033 346 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.5E-74 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DDI_RS16660 66d02f54d54ebd2fd01b3e7dc0423033 346 Gene3D G3DSA:3.20.20.70 8 341 4.6E-79 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS16660 66d02f54d54ebd2fd01b3e7dc0423033 346 SMART SM01240 7 344 4.1E-130 T 28-03-2018 DDI_RS16660 66d02f54d54ebd2fd01b3e7dc0423033 346 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.488 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SUPERFAMILY SSF55785 299 413 3.84E-23 T 28-03-2018 IPR000014 PAS domain DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SMART SM00086 369 412 1.7E-8 T 28-03-2018 IPR001610 PAC motif DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SMART SM00086 240 282 18.0 T 28-03-2018 IPR001610 PAC motif DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Gene3D G3DSA:3.30.450.20 287 426 9.4E-28 T 28-03-2018 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Pfam PF01590 GAF domain 37 149 2.4E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SUPERFAMILY SSF55785 169 283 5.15E-12 T 28-03-2018 IPR000014 PAS domain DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 606 769 1.5E-41 T 28-03-2018 IPR000160 GGDEF domain DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Gene3D G3DSA:3.30.450.40 3 163 2.3E-17 T 28-03-2018 IPR029016 GAF domain-like DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 416 1.4E-14 T 28-03-2018 IPR000014 PAS domain DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Gene3D G3DSA:3.30.450.20 164 286 1.1E-12 T 28-03-2018 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SUPERFAMILY SSF55781 25 165 1.53E-20 T 28-03-2018 IPR029016 GAF domain-like DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SUPERFAMILY SSF55073 613 770 7.22E-40 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Pfam PF00990 Diguanylate cyclase, GGDEF domain 608 767 7.0E-37 T 28-03-2018 IPR000160 GGDEF domain DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Pfam PF08447 PAS fold 190 273 5.2E-11 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Pfam PF08447 PAS fold 317 406 1.5E-21 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SMART SM00267 597 771 1.8E-49 T 28-03-2018 IPR000160 GGDEF domain DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Gene3D G3DSA:3.30.450.40 427 598 4.9E-13 T 28-03-2018 IPR029016 GAF domain-like DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Gene3D G3DSA:3.30.70.270 599 771 2.7E-46 T 28-03-2018 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 Pfam PF13185 GAF domain 440 586 6.6E-17 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SMART SM00065 441 601 0.07 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SMART SM00065 23 160 0.0014 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SMART SM00091 164 234 4.5 T 28-03-2018 IPR000014 PAS domain DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SMART SM00091 294 362 0.021 T 28-03-2018 IPR000014 PAS domain DDI_RS20130 8266dde2f44b8b0c61441c8925f9d0aa 771 SUPERFAMILY SSF55781 424 591 3.27E-12 T 28-03-2018 IPR029016 GAF domain-like DDI_RS00360 8e725ab478963ab119de25e7ee0d2426 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 300 2.6E-131 T 28-03-2018 IPR005911 Protein YhcC-like GO:0051536 DDI_RS00360 8e725ab478963ab119de25e7ee0d2426 309 Pfam PF16199 Radical_SAM C-terminal domain 209 290 8.0E-18 T 28-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 DDI_RS00360 8e725ab478963ab119de25e7ee0d2426 309 Pfam PF04055 Radical SAM superfamily 44 201 5.0E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS00360 8e725ab478963ab119de25e7ee0d2426 309 SMART SM00729 23 247 6.4E-43 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS00360 8e725ab478963ab119de25e7ee0d2426 309 Gene3D G3DSA:3.20.20.70 4 297 1.2E-39 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS00360 8e725ab478963ab119de25e7ee0d2426 309 SUPERFAMILY SSF102114 14 272 4.19E-47 T 28-03-2018 DDI_RS04120 0cdc0948d66ac93e82d37321b8c1a5de 355 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 3.5E-158 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DDI_RS04120 0cdc0948d66ac93e82d37321b8c1a5de 355 SUPERFAMILY SSF111337 1 343 5.1E-136 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DDI_RS04120 0cdc0948d66ac93e82d37321b8c1a5de 355 Gene3D G3DSA:3.40.1780.10 175 344 1.3E-64 T 28-03-2018 DDI_RS04120 0cdc0948d66ac93e82d37321b8c1a5de 355 Gene3D G3DSA:3.40.1780.10 1 129 8.1E-31 T 28-03-2018 DDI_RS04120 0cdc0948d66ac93e82d37321b8c1a5de 355 Pfam PF02547 Queuosine biosynthesis protein 4 343 2.1E-130 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DDI_RS04120 0cdc0948d66ac93e82d37321b8c1a5de 355 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.147 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 SUPERFAMILY SSF48029 114 323 1.44E-63 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 327 3.3E-139 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 5.3E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 5.3E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 5.3E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 5.3E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 5.3E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 5.3E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 5.3E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 Pfam PF14842 FliG N-terminal domain 3 102 9.1E-30 T 28-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 SUPERFAMILY SSF48029 4 103 4.97E-19 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 Pfam PF01706 FliG C-terminal domain 217 322 7.9E-37 T 28-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 Pfam PF14841 FliG middle domain 114 185 8.4E-25 T 28-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 Gene3D G3DSA:1.10.220.30 2 71 4.8E-10 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 Gene3D G3DSA:1.10.220.30 72 188 1.3E-22 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 Gene3D G3DSA:1.10.220.30 193 330 5.3E-29 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DDI_RS11995 4190bdc26958fa029052743a69a833f8 330 PIRSF PIRSF003161 1 330 2.2E-116 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DDI_RS10915 530591018eeed91c73af0d2e2a1c32dd 87 Pfam PF13617 YnbE-like lipoprotein 4 56 2.7E-24 T 28-03-2018 IPR025985 YnbE-like lipoprotein DDI_RS10915 530591018eeed91c73af0d2e2a1c32dd 87 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 12 57 4.0E-15 T 28-03-2018 DDI_RS16020 814ce57e40248610675bb60f10fb7dd1 82 Pfam PF07338 Protein of unknown function (DUF1471) 34 82 2.9E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS16020 814ce57e40248610675bb60f10fb7dd1 82 Gene3D G3DSA:3.30.1660.10 21 82 3.9E-19 T 28-03-2018 IPR025543 Dodecin-like DDI_RS16020 814ce57e40248610675bb60f10fb7dd1 82 SUPERFAMILY SSF159871 3 82 1.57E-22 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS13370 f8d53423d1e493a5958345842d1ee5f1 454 SUPERFAMILY SSF51556 50 373 2.63E-72 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS13370 f8d53423d1e493a5958345842d1ee5f1 454 Gene3D G3DSA:3.20.20.140 52 362 5.0E-41 T 28-03-2018 DDI_RS13370 f8d53423d1e493a5958345842d1ee5f1 454 Gene3D G3DSA:2.30.40.10 363 441 2.7E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS13370 f8d53423d1e493a5958345842d1ee5f1 454 Pfam PF01979 Amidohydrolase family 47 427 2.5E-30 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 DDI_RS13370 f8d53423d1e493a5958345842d1ee5f1 454 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 452 2.0E-196 T 28-03-2018 IPR010252 Formiminoglutamate deiminase DDI_RS13370 f8d53423d1e493a5958345842d1ee5f1 454 SUPERFAMILY SSF51338 361 435 2.32E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS12730 1f2bf8833641bdb359ebff770d42cc44 404 SUPERFAMILY SSF53383 7 401 1.14E-94 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS12730 1f2bf8833641bdb359ebff770d42cc44 404 Gene3D G3DSA:3.40.640.10 53 280 2.2E-49 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS12730 1f2bf8833641bdb359ebff770d42cc44 404 Gene3D G3DSA:3.90.1150.10 281 404 1.1E-22 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS12730 1f2bf8833641bdb359ebff770d42cc44 404 Pfam PF00155 Aminotransferase class I and II 58 390 2.6E-46 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS12080 f0df7f32c384af3965f44c13304380db 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site DDI_RS12080 f0df7f32c384af3965f44c13304380db 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 4.7E-117 T 28-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 DDI_RS12080 f0df7f32c384af3965f44c13304380db 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 1.1E-28 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G DDI_RS12080 f0df7f32c384af3965f44c13304380db 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 7.7E-49 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G DDI_RS12080 f0df7f32c384af3965f44c13304380db 260 Pfam PF00460 Flagella basal body rod protein 5 35 4.0E-14 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DDI_RS12080 f0df7f32c384af3965f44c13304380db 260 SUPERFAMILY SSF117143 94 222 1.57E-35 T 28-03-2018 DDI_RS12080 f0df7f32c384af3965f44c13304380db 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 2.6E-24 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DDI_RS05085 a16b446fbfddd19f03825c875bd591eb 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.866 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF DDI_RS05085 a16b446fbfddd19f03825c875bd591eb 245 Pfam PF03746 LamB/YcsF family 3 235 3.1E-93 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF DDI_RS05085 a16b446fbfddd19f03825c875bd591eb 245 SUPERFAMILY SSF88713 1 243 3.85E-92 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DDI_RS05085 a16b446fbfddd19f03825c875bd591eb 245 Gene3D G3DSA:3.20.20.370 2 244 6.8E-98 T 28-03-2018 DDI_RS16235 ba73756323409cbee6b26834f83997d9 383 SUPERFAMILY SSF52540 127 314 4.69E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16235 ba73756323409cbee6b26834f83997d9 383 SMART SM00382 139 296 7.5E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS16235 ba73756323409cbee6b26834f83997d9 383 Gene3D G3DSA:1.10.260.40 2 67 0.0039 T 28-03-2018 DDI_RS16235 ba73756323409cbee6b26834f83997d9 383 Pfam PF13401 AAA domain 138 280 3.8E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS16235 ba73756323409cbee6b26834f83997d9 383 Gene3D G3DSA:3.40.50.300 122 346 2.0E-10 T 28-03-2018 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 1.1E-47 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 SUPERFAMILY SSF46785 3 77 4.26E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 SUPERFAMILY SSF55252 82 149 3.53E-19 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.2E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.2E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.2E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.2E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 3.5E-22 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 Gene3D G3DSA:1.10.10.10 6 69 5.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 2.0E-31 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.969 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 Gene3D G3DSA:3.30.1360.40 76 151 8.6E-26 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 DDI_RS02035 dbb8174487028e86bd349cf25b00bb4a 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 2.2E-25 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 DDI_RS11075 791bd7e82f3d3ed30134ac547fc69549 330 SMART SM00382 32 245 8.9E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11075 791bd7e82f3d3ed30134ac547fc69549 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.8E-14 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS11075 791bd7e82f3d3ed30134ac547fc69549 330 SUPERFAMILY SSF52540 3 264 6.71E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11075 791bd7e82f3d3ed30134ac547fc69549 330 Gene3D G3DSA:3.40.50.300 1 329 1.2E-55 T 28-03-2018 DDI_RS11075 791bd7e82f3d3ed30134ac547fc69549 330 Pfam PF00005 ABC transporter 24 187 3.0E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS11075 791bd7e82f3d3ed30134ac547fc69549 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 2.9E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS07495 191f582c4c8fb0a9449a85e33fc1f58f 347 Pfam PF00005 ABC transporter 44 201 3.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07495 191f582c4c8fb0a9449a85e33fc1f58f 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 317 9.5E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS07495 191f582c4c8fb0a9449a85e33fc1f58f 347 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07495 191f582c4c8fb0a9449a85e33fc1f58f 347 SMART SM00382 52 259 7.4E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07495 191f582c4c8fb0a9449a85e33fc1f58f 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 252 337 7.1E-27 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS07495 191f582c4c8fb0a9449a85e33fc1f58f 347 Gene3D G3DSA:3.40.50.300 20 346 4.7E-79 T 28-03-2018 DDI_RS07495 191f582c4c8fb0a9449a85e33fc1f58f 347 SUPERFAMILY SSF52540 23 272 1.08E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02990 3d56b571291eebdbf5c537ef81a80761 95 Gene3D G3DSA:1.10.260.40 1 73 5.0E-16 T 28-03-2018 DDI_RS02990 3d56b571291eebdbf5c537ef81a80761 95 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 1.7E-37 T 28-03-2018 DDI_RS02990 3d56b571291eebdbf5c537ef81a80761 95 SUPERFAMILY SSF47413 3 72 4.5E-31 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 SMART SM00382 26 228 1.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 SMART SM00382 344 512 2.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 SUPERFAMILY SSF52540 298 523 1.01E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 Pfam PF00005 ABC transporter 337 467 1.3E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 Pfam PF00005 ABC transporter 18 184 7.2E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 Pfam PF12848 ABC transporter 224 309 2.1E-20 T 28-03-2018 IPR032781 ABC-transporter extension domain DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 Gene3D G3DSA:3.40.50.300 2 282 2.0E-52 T 28-03-2018 DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 SUPERFAMILY SSF52540 6 237 1.54E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS12645 d32cd27247d6a4d701419aceff851937 530 Gene3D G3DSA:3.40.50.300 283 530 1.1E-47 T 28-03-2018 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 Gene3D G3DSA:2.20.25.90 1 55 2.1E-16 T 28-03-2018 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 Pfam PF00384 Molybdopterin oxidoreductase 67 475 8.0E-78 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 SMART SM00926 1 55 7.1E-16 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 Gene3D G3DSA:3.40.50.740 65 251 1.3E-45 T 28-03-2018 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 Gene3D G3DSA:3.40.50.740 252 532 5.7E-77 T 28-03-2018 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 24 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 SUPERFAMILY SSF50692 566 713 6.78E-42 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 Pfam PF04324 BFD-like [2Fe-2S] binding domain 822 870 3.1E-11 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 53 1.4E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 SUPERFAMILY SSF53706 5 560 4.19E-173 T 28-03-2018 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 PIRSF PIRSF036643 2 697 2.3E-143 T 28-03-2018 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 Gene3D G3DSA:2.40.40.20 533 692 1.6E-39 T 28-03-2018 DDI_RS12480 60eeb9f5ca696810b50b69a416a7f86a 882 Pfam PF01568 Molydopterin dinucleotide binding domain 576 685 7.7E-27 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 DDI_RS11555 90ffcac0a27a2a22bd05dbb378bbe995 212 Gene3D G3DSA:3.60.15.10 1 212 3.2E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS11555 90ffcac0a27a2a22bd05dbb378bbe995 212 SUPERFAMILY SSF56281 2 209 4.59E-57 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS11555 90ffcac0a27a2a22bd05dbb378bbe995 212 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.6E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS11555 90ffcac0a27a2a22bd05dbb378bbe995 212 SMART SM00849 12 192 2.2E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS06070 d6821d0e27abedc330f9aba03692866e 297 Gene3D G3DSA:1.10.3720.10 18 274 2.1E-18 T 28-03-2018 DDI_RS06070 d6821d0e27abedc330f9aba03692866e 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 280 6.2E-8 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06070 d6821d0e27abedc330f9aba03692866e 297 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 280 2.1E-75 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DDI_RS06070 d6821d0e27abedc330f9aba03692866e 297 SUPERFAMILY SSF161098 82 272 2.83E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 Gene3D G3DSA:3.30.565.10 379 532 6.9E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 SUPERFAMILY SSF55785 214 315 3.35E-5 T 28-03-2018 IPR000014 PAS domain DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 Gene3D G3DSA:3.30.450.20 36 174 1.3E-23 T 28-03-2018 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 Pfam PF00989 PAS fold 216 316 1.9E-6 T 28-03-2018 IPR013767 PAS fold GO:0006355 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 Pfam PF17203 Single cache domain 3 44 172 4.3E-16 T 28-03-2018 IPR033463 Single cache domain 3 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 9.9E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 9.9E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 9.9E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 SUPERFAMILY SSF55890 329 397 3.53E-15 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 SUPERFAMILY SSF55874 400 530 1.83E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 Gene3D G3DSA:1.10.287.130 320 378 1.8E-15 T 28-03-2018 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 Gene3D G3DSA:3.30.450.20 218 319 4.2E-10 T 28-03-2018 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 SMART SM00387 423 531 1.4E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 333 377 6.6E-10 T 28-03-2018 DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 529 1.8E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19540 00bc8bbcb28d771adae80e0989e8b5a4 537 SUPERFAMILY SSF103190 40 172 1.1E-34 T 28-03-2018 IPR029151 Periplasmic sensor domain-like DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 SUPERFAMILY SSF46785 5 73 5.66E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 SMART SM01134 72 238 2.3E-52 T 28-03-2018 DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 SMART SM00420 6 58 1.4E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 SUPERFAMILY SSF100950 75 236 5.86E-25 T 28-03-2018 DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 Gene3D G3DSA:1.10.10.10 1 63 1.6E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 Gene3D G3DSA:3.40.50.1360 66 237 1.2E-30 T 28-03-2018 DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 3.9E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.7E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.7E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 Pfam PF00455 DeoR C terminal sensor domain 75 236 3.7E-40 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain DDI_RS07305 f5aa736b828aea3c003b96d331204e0b 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDI_RS19115 698ac5bfeba47d4d615f46bf2f46afb2 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.069 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 DDI_RS19115 698ac5bfeba47d4d615f46bf2f46afb2 80 Pfam PF06005 Cell division protein ZapB 1 77 1.1E-27 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 DDI_RS19115 698ac5bfeba47d4d615f46bf2f46afb2 80 Gene3D G3DSA:1.20.5.370 13 47 4.4E-13 T 28-03-2018 DDI_RS19115 698ac5bfeba47d4d615f46bf2f46afb2 80 Gene3D G3DSA:1.20.5.370 48 80 6.3E-11 T 28-03-2018 DDI_RS16860 fb994df7605dd62e5e339ec6538cb0d6 230 SUPERFAMILY SSF52540 1 226 1.09E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16860 fb994df7605dd62e5e339ec6538cb0d6 230 Pfam PF00005 ABC transporter 18 157 4.9E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS16860 fb994df7605dd62e5e339ec6538cb0d6 230 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 209 3.2E-100 T 28-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 DDI_RS16860 fb994df7605dd62e5e339ec6538cb0d6 230 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS16860 fb994df7605dd62e5e339ec6538cb0d6 230 Gene3D G3DSA:3.40.50.300 1 229 1.6E-55 T 28-03-2018 DDI_RS16860 fb994df7605dd62e5e339ec6538cb0d6 230 SMART SM00382 24 214 7.0E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 2.2E-78 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.2E-89 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 SMART SM00663 235 514 1.1E-184 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Gene3D G3DSA:2.40.50.100 1153 1213 1.1E-15 T 28-03-2018 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Gene3D G3DSA:2.40.50.100 1022 1126 2.8E-12 T 28-03-2018 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Gene3D G3DSA:2.40.50.100 907 1021 9.6E-27 T 28-03-2018 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Gene3D G3DSA:2.40.40.20 346 488 7.3E-40 T 28-03-2018 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.9E-18 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 SUPERFAMILY SSF64484 1133 1364 0.0 T 28-03-2018 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 SUPERFAMILY SSF64484 16 944 0.0 T 28-03-2018 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 19.078 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21465 9eec62e3fad35f1f52194ee03b41e86c 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.2E-27 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 252 6.8E-98 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 453 32.536 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 Gene3D G3DSA:3.20.20.70 5 255 2.1E-63 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 448 4.1E-57 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 35.435 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 SUPERFAMILY SSF51366 4 252 3.53E-82 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 Gene3D G3DSA:3.20.20.70 258 455 1.7E-61 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS09120 7e99a99955cb2139c784df4baf387000 461 SUPERFAMILY SSF51366 258 451 2.83E-58 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 Gene3D G3DSA:2.30.330.10 43 138 3.0E-31 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 50 2.7E-22 T 28-03-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 103 2.2E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 118 2.2E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 57 73 2.2E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 90 2.2E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 129 8.4E-34 T 28-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 SUPERFAMILY SSF101801 55 136 3.66E-27 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS12030 8bf22ca09411617c858e21003d98d5e6 138 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 57 127 8.9E-26 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS11565 ced5b605fd7b83c8c0e8f1d2df3cd333 562 Pfam PF01471 Putative peptidoglycan binding domain 262 294 1.0E-5 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS11565 ced5b605fd7b83c8c0e8f1d2df3cd333 562 Gene3D G3DSA:2.40.440.10 320 502 1.7E-22 T 28-03-2018 DDI_RS11565 ced5b605fd7b83c8c0e8f1d2df3cd333 562 Gene3D G3DSA:1.10.101.10 214 300 7.6E-15 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS11565 ced5b605fd7b83c8c0e8f1d2df3cd333 562 SUPERFAMILY SSF47090 209 302 7.85E-10 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS11565 ced5b605fd7b83c8c0e8f1d2df3cd333 562 SUPERFAMILY SSF141523 322 374 4.19E-19 T 28-03-2018 DDI_RS11565 ced5b605fd7b83c8c0e8f1d2df3cd333 562 SUPERFAMILY SSF141523 431 480 4.19E-19 T 28-03-2018 DDI_RS11565 ced5b605fd7b83c8c0e8f1d2df3cd333 562 Pfam PF03734 L,D-transpeptidase catalytic domain 323 490 3.2E-28 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 SMART SM00847 460 554 1.9E-35 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 SMART SM00490 300 400 8.3E-15 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 Pfam PF00271 Helicase conserved C-terminal domain 279 399 2.5E-11 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 11 1291 0.0 T 28-03-2018 IPR010222 RNA helicase HrpA GO:0004004 DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 Pfam PF00270 DEAD/DEAH box helicase 82 229 1.2E-5 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 Pfam PF04408 Helicase associated domain (HA2) 462 552 1.3E-16 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 SMART SM00487 71 255 6.2E-26 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 617 693 3.7E-17 T 28-03-2018 IPR011709 Domain of unknown function DUF1605 DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 Gene3D G3DSA:3.40.50.300 249 418 9.2E-47 T 28-03-2018 DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 Pfam PF11898 Domain of unknown function (DUF3418) 708 1292 8.2E-236 T 28-03-2018 IPR024590 RNA helicase HrpA, C-terminal DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 SMART SM00382 88 380 8.7E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 Gene3D G3DSA:3.40.50.300 72 231 1.5E-28 T 28-03-2018 DDI_RS10905 eba24e5fd34cb19dfdb669b1cea744ba 1295 SUPERFAMILY SSF52540 70 596 3.34E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 SUPERFAMILY SSF51735 3 242 5.24E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 1.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 Pfam PF00106 short chain dehydrogenase 6 186 6.5E-47 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03370 0e60bb147e4a5f1c6371afe0bf6b5c50 272 Gene3D G3DSA:3.40.50.720 3 248 2.6E-57 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF53901 2865 3235 1.09E-93 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF00550 Phosphopantetheine attachment site 2721 2782 5.9E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF00550 Phosphopantetheine attachment site 2590 2651 6.7E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF00550 Phosphopantetheine attachment site 1237 1296 2.4E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 TIGRFAM TIGR01686 FkbH: FkbH domain 807 1125 2.4E-85 T 28-03-2018 IPR010037 FkbH domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF14765 Polyketide synthase dehydratase 14 285 2.9E-29 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2744 2759 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3119 3236 2.5E-40 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1610 1727 2.1E-36 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:1.10.1200.10 2714 2864 2.2E-14 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:1.10.1200.10 2582 2689 1.2E-12 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.40.47.10 2865 3123 4.4E-82 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.40.47.10 1346 1614 1.3E-79 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2613 2628 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SMART SM00825 Beta-ketoacyl synthase 2868 3290 1.1E-194 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SMART SM00825 Beta-ketoacyl synthase 1356 1781 1.8E-193 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SMART SM01294 2588 2654 9.9E-30 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SMART SM01294 2719 2785 2.8E-34 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF47336 2583 2657 7.72E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.90.226.10 2284 2538 3.2E-34 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.40.47.10 3126 3288 1.4E-57 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.40.47.10 1617 1779 1.3E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.40.630.30 961 1125 2.7E-4 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF53901 1350 1720 4.36E-90 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF56784 806 928 6.42E-9 T 28-03-2018 IPR023214 HAD-like domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.40.50.150 441 675 7.8E-36 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF52096 2062 2235 1.01E-18 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF53335 580 658 5.05E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF53335 426 540 5.05E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.90.226.10 2034 2276 1.8E-17 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF05050 Methyltransferase FkbM domain 461 655 1.1E-13 T 28-03-2018 IPR006342 Methyltransferase FkbM DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.10.129.10 2 110 0.21 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF00378 Enoyl-CoA hydratase/isomerase 2301 2523 1.0E-42 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF00378 Enoyl-CoA hydratase/isomerase 2107 2245 1.0E-11 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1354 1602 7.5E-90 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2867 3111 1.6E-89 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF47336 2850 2878 1.7E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF47336 2717 2790 1.7E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 808 924 3.8E-20 T 28-03-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:1.10.1200.10 1203 1307 1.4E-8 T 28-03-2018 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF52096 2291 2525 1.48E-42 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF47336 1338 1369 4.84E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SUPERFAMILY SSF47336 1237 1305 4.84E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SMART SM00823 Phosphopantetheine attachment site 2587 2658 3.4E-12 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SMART SM00823 Phosphopantetheine attachment site 1235 1304 0.012 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 SMART SM00823 Phosphopantetheine attachment site 2718 2789 4.3E-13 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 458 635 1.1E-23 T 28-03-2018 IPR006342 Methyltransferase FkbM DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3240 3337 1.3E-10 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1730 1843 1.1E-13 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 Gene3D G3DSA:3.40.50.1000 806 960 9.3E-14 T 28-03-2018 IPR023214 HAD-like domain DDI_RS12335 c9bc438a9df8e8a06bb27ae838a44e9d 3847 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3024 3040 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS02225 13f15f2d4c987f79e6bb5926b98909a9 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.891 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DDI_RS02225 13f15f2d4c987f79e6bb5926b98909a9 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02225 13f15f2d4c987f79e6bb5926b98909a9 241 Pfam PF01048 Phosphorylase superfamily 15 219 9.2E-40 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDI_RS02225 13f15f2d4c987f79e6bb5926b98909a9 241 Gene3D G3DSA:3.40.50.1580 9 235 1.6E-55 T 28-03-2018 DDI_RS02225 13f15f2d4c987f79e6bb5926b98909a9 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.5E-124 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DDI_RS02225 13f15f2d4c987f79e6bb5926b98909a9 241 SUPERFAMILY SSF53167 3 234 2.23E-94 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDI_RS07220 0b9bfc31fa8f00c88f8aebcf9098cd12 256 SUPERFAMILY SSF56219 12 254 2.09E-45 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS07220 0b9bfc31fa8f00c88f8aebcf9098cd12 256 Gene3D G3DSA:3.60.10.10 2 255 6.3E-32 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS07220 0b9bfc31fa8f00c88f8aebcf9098cd12 256 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 36 247 8.3E-16 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 SMART SM01185 69 125 4.3E-15 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 Gene3D G3DSA:2.40.50.140 67 125 1.1E-15 T 28-03-2018 DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 Gene3D G3DSA:2.30.30.30 2 63 3.4E-14 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 Gene3D G3DSA:2.40.50.140 133 188 8.5E-21 T 28-03-2018 DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 SUPERFAMILY SSF50249 67 130 1.47E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 61 1.0E-15 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 SUPERFAMILY SSF50249 132 189 1.18E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 43.643 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 7.4E-19 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 2.3E-14 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 8.3E-99 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 SUPERFAMILY SSF50104 1 64 2.23E-10 T 28-03-2018 IPR008991 Translation protein SH3-like domain DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 PIRSF PIRSF005901 1 190 9.1E-60 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP DDI_RS07725 09255a745c6f267ab73ce475e98ab0d4 190 SMART SM00841 133 188 9.3E-27 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DDI_RS14655 61ff5fa3c27286fcda56881876f80239 263 SUPERFAMILY SSF56219 37 262 2.62E-22 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS14655 61ff5fa3c27286fcda56881876f80239 263 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 253 1.5E-7 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS14655 61ff5fa3c27286fcda56881876f80239 263 Gene3D G3DSA:3.60.10.10 39 261 7.6E-15 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 Pfam PF02065 Melibiase 255 593 1.7E-114 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 Gene3D G3DSA:2.60.40.1180 592 709 6.9E-17 T 28-03-2018 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PIRSF PIRSF005536 1 708 1.9E-232 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 611 696 7.4E-9 T 28-03-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 Gene3D G3DSA:2.70.98.60 1 275 2.1E-69 T 28-03-2018 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PRINTS PR00743 Glycosyl hydrolase family 36 signature 258 278 2.5E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PRINTS PR00743 Glycosyl hydrolase family 36 signature 504 520 2.5E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PRINTS PR00743 Glycosyl hydrolase family 36 signature 373 395 2.5E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PRINTS PR00743 Glycosyl hydrolase family 36 signature 295 309 2.5E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PRINTS PR00743 Glycosyl hydrolase family 36 signature 431 446 2.5E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PRINTS PR00743 Glycosyl hydrolase family 36 signature 479 495 2.5E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PRINTS PR00743 Glycosyl hydrolase family 36 signature 207 222 2.5E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 PRINTS PR00743 Glycosyl hydrolase family 36 signature 323 338 2.5E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 ProSitePatterns PS00512 Alpha-galactosidase signature. 324 339 - T 28-03-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 SUPERFAMILY SSF51445 292 621 2.58E-104 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 Gene3D G3DSA:3.20.20.70 277 591 4.0E-53 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS06240 97083c9e1d179736aa968da1617f9216 709 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 24 239 1.0E-44 T 28-03-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDI_RS14900 cdcaf1276089c734e31c941cf90451e7 335 SUPERFAMILY SSF90002 240 333 7.19E-23 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DDI_RS14900 cdcaf1276089c734e31c941cf90451e7 335 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 240 332 1.5E-16 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DDI_RS14900 cdcaf1276089c734e31c941cf90451e7 335 SUPERFAMILY SSF52540 22 214 7.84E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14900 cdcaf1276089c734e31c941cf90451e7 335 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 21 197 1.6E-48 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DDI_RS14900 cdcaf1276089c734e31c941cf90451e7 335 Gene3D G3DSA:3.30.1220.10 223 335 1.8E-20 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DDI_RS14900 cdcaf1276089c734e31c941cf90451e7 335 SMART SM00833 240 334 2.1E-12 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DDI_RS14900 cdcaf1276089c734e31c941cf90451e7 335 Gene3D G3DSA:3.40.50.300 18 218 9.3E-44 T 28-03-2018 DDI_RS07930 df83bce6a801662d715e053cc3807612 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDI_RS07930 df83bce6a801662d715e053cc3807612 256 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 1.1E-11 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS07930 df83bce6a801662d715e053cc3807612 256 SMART SM00420 8 58 3.3E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS07930 df83bce6a801662d715e053cc3807612 256 Gene3D G3DSA:1.10.10.10 1 36 1.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS07930 df83bce6a801662d715e053cc3807612 256 SUPERFAMILY SSF100950 78 238 4.81E-24 T 28-03-2018 DDI_RS07930 df83bce6a801662d715e053cc3807612 256 SMART SM01134 76 237 4.9E-56 T 28-03-2018 DDI_RS07930 df83bce6a801662d715e053cc3807612 256 Gene3D G3DSA:3.40.50.1360 81 240 4.1E-29 T 28-03-2018 DDI_RS07930 df83bce6a801662d715e053cc3807612 256 Pfam PF00455 DeoR C terminal sensor domain 78 235 2.4E-41 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain DDI_RS07930 df83bce6a801662d715e053cc3807612 256 Gene3D G3DSA:1.10.260.40 37 80 0.0018 T 28-03-2018 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15725 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 1 75 1.5E-31 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 1.7E-132 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 420 2.7E-237 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 Gene3D G3DSA:1.10.580.10 26 281 4.3E-88 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 PIRSF PIRSF001369 38 428 2.9E-173 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 SUPERFAMILY SSF48256 4 423 4.32E-167 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 PRINTS PR00143 Citrate synthase signature 219 234 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 PRINTS PR00143 Citrate synthase signature 165 178 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 PRINTS PR00143 Citrate synthase signature 241 269 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 PRINTS PR00143 Citrate synthase signature 359 375 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 PRINTS PR00143 Citrate synthase signature 379 393 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 PRINTS PR00143 Citrate synthase signature 296 316 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 DDI_RS05090 6a79d404e6a2864418ca3d8c26be9bf5 428 Gene3D G3DSA:1.10.230.10 282 379 9.0E-37 T 28-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 282 301 8.3E-46 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 8.3E-46 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 160 182 8.3E-46 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 251 268 8.3E-46 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 107 129 8.3E-46 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 SUPERFAMILY SSF56935 23 377 5.23E-62 T 28-03-2018 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 Gene3D G3DSA:2.40.160.10 11 377 1.7E-46 T 28-03-2018 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 331 347 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 58 69 4.5E-12 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 331 348 4.5E-12 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 245 257 4.5E-12 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 162 173 4.5E-12 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11535 1235659453a4d058ec7ba383d6097271 377 Pfam PF00267 Gram-negative porin 28 377 6.3E-96 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Gene3D G3DSA:3.40.50.920 255 417 7.9E-44 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Pfam PF12838 4Fe-4S dicluster domain 689 757 1.2E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 5.3E-8 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 SUPERFAMILY SSF52518 794 1164 1.83E-116 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Gene3D G3DSA:4.10.780.10 634 668 1.7E-15 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 PIRSF PIRSF000159 1 1177 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Gene3D G3DSA:3.40.50.970 1 254 5.4E-49 T 28-03-2018 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Pfam PF10371 Domain of unknown function 627 678 3.4E-23 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Gene3D G3DSA:3.40.50.970 793 1171 1.1E-101 T 28-03-2018 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Gene3D G3DSA:3.30.70.20 669 791 8.3E-30 T 28-03-2018 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 SUPERFAMILY SSF53323 419 668 3.79E-72 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 243 1.8E-79 T 28-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 SMART SM00890 622 679 6.2E-31 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 266 347 5.6E-13 T 28-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 SUPERFAMILY SSF54862 665 837 2.51E-23 T 28-03-2018 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Gene3D G3DSA:3.40.920.10 418 622 1.7E-52 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 SUPERFAMILY SSF52922 256 410 6.85E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 5.3E-33 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DDI_RS02700 d8b10bc24e2a4bb030a9e48c86f382e6 1177 SUPERFAMILY SSF52518 2 254 5.89E-73 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS14530 b30003121330603dfb346e2f9d984005 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.453 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DDI_RS14530 b30003121330603dfb346e2f9d984005 264 PIRSF PIRSF000388 1 264 2.2E-95 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DDI_RS14530 b30003121330603dfb346e2f9d984005 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 3.7E-107 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DDI_RS14530 b30003121330603dfb346e2f9d984005 264 Gene3D G3DSA:3.20.20.60 1 263 2.4E-81 T 28-03-2018 DDI_RS14530 b30003121330603dfb346e2f9d984005 264 SUPERFAMILY SSF51621 4 263 4.92E-104 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS14530 b30003121330603dfb346e2f9d984005 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 3.1E-118 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DDI_RS15440 4f8725b26b65e7ae49937266b6e36bda 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.265 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DDI_RS15440 4f8725b26b65e7ae49937266b6e36bda 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 5.0E-168 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DDI_RS15440 4f8725b26b65e7ae49937266b6e36bda 302 SUPERFAMILY SSF52402 6 209 1.06E-75 T 28-03-2018 DDI_RS15440 4f8725b26b65e7ae49937266b6e36bda 302 PIRSF PIRSF002936 1 302 1.0E-156 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DDI_RS15440 4f8725b26b65e7ae49937266b6e36bda 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 7.9E-66 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 DDI_RS15440 4f8725b26b65e7ae49937266b6e36bda 302 Gene3D G3DSA:3.40.50.620 2 268 2.2E-41 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS09165 462b58f781a2d0317bb2f7d3372e9096 348 Pfam PF01343 Peptidase family S49 160 306 5.9E-47 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DDI_RS09165 462b58f781a2d0317bb2f7d3372e9096 348 Gene3D G3DSA:3.90.226.10 48 307 5.4E-32 T 28-03-2018 DDI_RS09165 462b58f781a2d0317bb2f7d3372e9096 348 SUPERFAMILY SSF52096 239 298 4.39E-31 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS09165 462b58f781a2d0317bb2f7d3372e9096 348 SUPERFAMILY SSF52096 99 208 4.39E-31 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS09165 462b58f781a2d0317bb2f7d3372e9096 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 4.6E-60 T 28-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 DDI_RS01240 3c25532f5f445125f0e080d161976e12 258 Pfam PF13847 Methyltransferase domain 33 146 3.7E-16 T 28-03-2018 IPR025714 Methyltransferase domain DDI_RS01240 3c25532f5f445125f0e080d161976e12 258 SUPERFAMILY SSF53335 14 227 6.03E-34 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS01240 3c25532f5f445125f0e080d161976e12 258 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 44.362 T 28-03-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS01240 3c25532f5f445125f0e080d161976e12 258 Gene3D G3DSA:1.10.150.290 181 236 8.3E-29 T 28-03-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS01240 3c25532f5f445125f0e080d161976e12 258 Gene3D G3DSA:3.40.50.150 1 180 5.0E-30 T 28-03-2018 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 SUPERFAMILY SSF53623 94 296 2.09E-55 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 Gene3D G3DSA:3.40.1190.10 94 298 2.5E-59 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 SUPERFAMILY SSF51984 1 93 6.67E-23 T 28-03-2018 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 436 33.996 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 SUPERFAMILY SSF53244 298 436 9.16E-50 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 Pfam PF08245 Mur ligase middle domain 109 279 1.5E-25 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 Gene3D G3DSA:3.40.50.720 1 93 3.6E-14 T 28-03-2018 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 7 434 9.6E-124 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 Gene3D G3DSA:3.90.190.20 299 433 3.8E-34 T 28-03-2018 DDI_RS16735 ec2f785021d38e84fc090974365738cd 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 300 367 1.7E-7 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 528 1.8E-253 T 28-03-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 SUPERFAMILY SSF56801 5 533 1.57E-128 T 28-03-2018 DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 Gene3D G3DSA:3.40.50.980 192 347 7.1E-30 T 28-03-2018 DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 Pfam PF00501 AMP-binding enzyme 37 438 3.1E-75 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 Gene3D G3DSA:3.30.300.30 432 537 7.3E-25 T 28-03-2018 DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 Gene3D G3DSA:3.40.50.980 27 191 1.2E-27 T 28-03-2018 DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 Gene3D G3DSA:2.30.38.10 348 431 6.4E-19 T 28-03-2018 DDI_RS13080 61debaaf4073c10a23b769d5cf8d6f0b 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 447 521 1.3E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Gene3D G3DSA:3.30.70.100 69 135 4.5E-14 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF55008 194 257 1.01E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Pfam PF00403 Heavy-metal-associated domain 9 62 5.8E-11 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Pfam PF00403 Heavy-metal-associated domain 199 253 4.8E-14 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Pfam PF00403 Heavy-metal-associated domain 73 128 3.4E-9 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF56784 613 633 1.54E-56 T 28-03-2018 IPR023214 HAD-like domain DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF56784 670 922 1.54E-56 T 28-03-2018 IPR023214 HAD-like domain DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 ProSitePatterns PS01229 Hypothetical cof family signature 2. 816 838 - T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 617 623 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Gene3D G3DSA:3.30.70.100 191 277 2.4E-20 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF55008 70 131 3.4E-13 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 816 835 2.7E-22 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 2.7E-22 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 763 773 2.7E-22 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 615 629 2.7E-22 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 839 851 2.7E-22 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Gene3D G3DSA:3.40.1110.10 632 741 7.0E-26 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Pfam PF00122 E1-E2 ATPase 414 594 3.9E-46 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 385 894 3.4E-81 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Gene3D G3DSA:1.20.1110.10 380 631 2.4E-42 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 346 925 3.4E-176 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Pfam PF00702 haloacid dehalogenase-like hydrolase 612 830 2.8E-44 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF55008 2 67 6.15E-13 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Gene3D G3DSA:3.30.70.100 1 68 6.8E-15 T 28-03-2018 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF81665 514 609 2.48E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF81665 380 417 2.48E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF81665 865 884 2.48E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 Gene3D G3DSA:3.40.50.1000 742 882 7.1E-46 T 28-03-2018 IPR023214 HAD-like domain DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 SUPERFAMILY SSF81653 416 513 1.57E-22 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 847 872 9.0E-6 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 816 832 9.0E-6 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 ProSitePatterns PS01047 Heavy-metal-associated domain. 199 228 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DDI_RS04495 a4b770d9e06ac6ae7a0d08bbed71fe58 938 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 327 925 4.5E-180 T 28-03-2018 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 SUPERFAMILY SSF47413 1 57 1.16E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 Gene3D G3DSA:3.40.50.2300 55 173 3.2E-19 T 28-03-2018 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 Pfam PF13377 Periplasmic binding protein-like domain 166 328 1.0E-19 T 28-03-2018 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 SMART SM00354 1 71 8.2E-29 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 Gene3D G3DSA:1.10.260.40 3 54 1.2E-17 T 28-03-2018 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 Gene3D G3DSA:3.40.50.2300 174 307 2.1E-23 T 28-03-2018 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 DDI_RS09675 f17085b091b087edc19788631121bf8e 337 SUPERFAMILY SSF53822 61 328 3.73E-37 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS09675 f17085b091b087edc19788631121bf8e 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 PIRSF PIRSF500134 338 388 0.14 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 PIRSF PIRSF500134 1 344 5.3E-122 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.3E-27 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 Gene3D G3DSA:3.40.50.720 1 193 1.0E-50 T 28-03-2018 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 SUPERFAMILY SSF48179 191 287 9.01E-31 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 SUPERFAMILY SSF51735 1 194 4.14E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 Gene3D G3DSA:1.10.1040.10 212 287 5.6E-28 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 PIRSF PIRSF000124 1 388 2.2E-135 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 6.2E-32 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 Gene3D G3DSA:1.20.5.100 194 211 3.0E-14 T 28-03-2018 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 SMART SM00984 300 387 3.7E-14 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 SUPERFAMILY SSF52413 283 387 2.09E-26 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 Gene3D G3DSA:3.40.50.720 288 388 3.7E-15 T 28-03-2018 DDI_RS05440 c0d7bf778ab4aca02eab4f6d66d23a70 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 377 2.0E-101 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DDI_RS16230 5412bf1125e2f5124cdb83f60c338bb6 588 Pfam PF00665 Integrase core domain 152 298 5.3E-11 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 DDI_RS16230 5412bf1125e2f5124cdb83f60c338bb6 588 SUPERFAMILY SSF53098 193 334 4.17E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS16230 5412bf1125e2f5124cdb83f60c338bb6 588 SUPERFAMILY SSF53098 149 163 4.17E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS16230 5412bf1125e2f5124cdb83f60c338bb6 588 Gene3D G3DSA:1.10.10.60 10 56 0.0019 T 28-03-2018 DDI_RS16230 5412bf1125e2f5124cdb83f60c338bb6 588 Gene3D G3DSA:3.30.420.10 146 355 2.2E-26 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 Gene3D G3DSA:1.10.8.50 131 269 2.3E-51 T 28-03-2018 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 3.3E-30 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 SUPERFAMILY SSF57716 217 268 6.84E-17 T 28-03-2018 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.962 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 2.7E-10 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.0E-24 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 SMART SM00898 2 115 3.2E-53 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 SUPERFAMILY SSF81624 2 138 3.66E-43 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.7E-97 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 Gene3D G3DSA:3.20.190.10 1 130 7.3E-37 T 28-03-2018 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 SMART SM01232 129 221 4.5E-45 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DDI_RS21100 78d2c9ba2287f0ce208e098a8e85b834 269 SUPERFAMILY SSF46946 130 222 3.68E-28 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 SMART SM00388 253 316 3.2E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 Pfam PF00672 HAMP domain 198 247 7.6E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 SMART SM00304 197 252 1.1E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 469 4.1E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 6.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 6.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 6.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 SMART SM00387 362 472 2.6E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 315 5.6E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 Gene3D G3DSA:3.30.565.10 319 472 3.7E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 Gene3D G3DSA:1.10.287.130 243 312 9.1E-14 T 28-03-2018 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 SUPERFAMILY SSF47384 237 316 5.69E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 SUPERFAMILY SSF158472 198 248 9.55E-9 T 28-03-2018 DDI_RS03030 d8a3ffe7d58af15ad260256fba7da246 472 SUPERFAMILY SSF55874 306 470 5.24E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS15880 a37c0455eb0acb9c63d8f1d98dcb7d17 151 Pfam PF00583 Acetyltransferase (GNAT) family 16 118 2.8E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS15880 a37c0455eb0acb9c63d8f1d98dcb7d17 151 SUPERFAMILY SSF55729 16 138 2.03E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS15880 a37c0455eb0acb9c63d8f1d98dcb7d17 151 Gene3D G3DSA:3.40.630.30 8 149 1.7E-16 T 28-03-2018 DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 Pfam PF00005 ABC transporter 29 178 3.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 Pfam PF00005 ABC transporter 280 434 5.4E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 SMART SM00382 38 233 3.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 SMART SM00382 288 483 1.0 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 SUPERFAMILY SSF52540 254 490 2.62E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 Gene3D G3DSA:3.40.50.300 254 499 3.1E-32 T 28-03-2018 DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 SUPERFAMILY SSF52540 12 236 4.69E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 Gene3D G3DSA:3.40.50.300 2 240 4.7E-51 T 28-03-2018 DDI_RS04665 09c3cfa67cbd09cb9c882cdd63382bd9 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.0E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 Pfam PF03466 LysR substrate binding domain 93 289 7.6E-14 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 Gene3D G3DSA:3.40.190.10 179 262 4.8E-10 T 28-03-2018 DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 Gene3D G3DSA:1.10.10.10 2 84 1.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 SUPERFAMILY SSF53850 92 291 4.71E-20 T 28-03-2018 DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 Gene3D G3DSA:3.40.190.10 92 178 8.5E-36 T 28-03-2018 DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 2.3E-112 T 28-03-2018 IPR017685 HTH-type transcriptional regulator ArgP DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.964 T 28-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 SUPERFAMILY SSF46785 4 110 8.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17150 8721ed958e099e225786f6c7f49901e7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02950 05e92a8a1fac29f13cd2b797afbfafea 411 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 1.3E-99 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 DDI_RS02950 05e92a8a1fac29f13cd2b797afbfafea 411 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 5.5E-122 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 DDI_RS02950 05e92a8a1fac29f13cd2b797afbfafea 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 7.7E-31 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 DDI_RS02950 05e92a8a1fac29f13cd2b797afbfafea 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 7.7E-31 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 DDI_RS02950 05e92a8a1fac29f13cd2b797afbfafea 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 7.7E-31 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 DDI_RS02950 05e92a8a1fac29f13cd2b797afbfafea 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 7.7E-31 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 DDI_RS02950 05e92a8a1fac29f13cd2b797afbfafea 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 7.7E-31 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 DDI_RS02950 05e92a8a1fac29f13cd2b797afbfafea 411 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 36.963 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 DDI_RS04605 b0be8df26835b81bf802568e5aa79a02 103 SUPERFAMILY SSF47598 15 92 5.11E-18 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS04605 b0be8df26835b81bf802568e5aa79a02 103 Pfam PF08681 Protein of unknown function (DUF1778) 18 96 3.0E-21 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 DDI_RS04605 b0be8df26835b81bf802568e5aa79a02 103 Gene3D G3DSA:1.20.5.780 15 94 9.9E-23 T 28-03-2018 DDI_RS04765 f65ed84948f5c828307f484f8f64c49e 222 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 22 177 8.3E-39 T 28-03-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 DDI_RS04765 f65ed84948f5c828307f484f8f64c49e 222 Gene3D G3DSA:3.30.1380.10 12 183 7.7E-32 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDI_RS04765 f65ed84948f5c828307f484f8f64c49e 222 SUPERFAMILY SSF55166 17 178 2.94E-21 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDI_RS11895 cec4654d24ff84baaf034e6440378dbb 212 SUPERFAMILY SSF89623 1 161 2.49E-37 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DDI_RS11895 cec4654d24ff84baaf034e6440378dbb 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 1.0E-22 T 28-03-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal DDI_RS11895 cec4654d24ff84baaf034e6440378dbb 212 Gene3D G3DSA:3.40.1400.10 1 212 9.9E-57 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DDI_RS11895 cec4654d24ff84baaf034e6440378dbb 212 Pfam PF02502 Ribose/Galactose Isomerase 3 159 3.3E-31 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DDI_RS00195 daf4509674ab1c0835bacd8f817bb8de 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 23.786 T 28-03-2018 IPR006839 Ribosome-associated, YjgA DDI_RS00195 daf4509674ab1c0835bacd8f817bb8de 182 Gene3D G3DSA:1.10.60.30 111 182 5.3E-27 T 28-03-2018 DDI_RS00195 daf4509674ab1c0835bacd8f817bb8de 182 SUPERFAMILY SSF158710 37 180 5.36E-51 T 28-03-2018 IPR023153 PSPTO4464-like domain DDI_RS00195 daf4509674ab1c0835bacd8f817bb8de 182 PIRSF PIRSF016183 9 182 6.5E-71 T 28-03-2018 IPR006839 Ribosome-associated, YjgA DDI_RS00195 daf4509674ab1c0835bacd8f817bb8de 182 Gene3D G3DSA:1.10.60.30 38 106 4.8E-25 T 28-03-2018 DDI_RS00195 daf4509674ab1c0835bacd8f817bb8de 182 Pfam PF04751 Protein of unknown function (DUF615) 26 176 1.5E-55 T 28-03-2018 IPR006839 Ribosome-associated, YjgA DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 8 423 2.8E-163 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 SMART SM00825 Beta-ketoacyl synthase 9 427 1.3E-14 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 167 183 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 PIRSF PIRSF000447 5 427 2.9E-159 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 Gene3D G3DSA:3.40.47.10 9 273 7.8E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 268 381 3.5E-37 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 SUPERFAMILY SSF53901 228 426 2.51E-67 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 SUPERFAMILY SSF53901 8 265 3.51E-71 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 Gene3D G3DSA:3.40.47.10 276 429 2.8E-50 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS06545 8e4e15b92f13c62fe2d464ee40228cd4 435 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 260 4.5E-55 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS08960 1f18f32085a8745db16c503d021773c6 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 7.2E-24 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS08960 1f18f32085a8745db16c503d021773c6 268 SUPERFAMILY SSF56219 1 267 6.15E-88 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS08960 1f18f32085a8745db16c503d021773c6 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 2.5E-89 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DDI_RS08960 1f18f32085a8745db16c503d021773c6 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.3E-106 T 28-03-2018 DDI_RS08960 1f18f32085a8745db16c503d021773c6 268 Gene3D G3DSA:3.60.10.10 1 268 3.9E-53 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS08960 1f18f32085a8745db16c503d021773c6 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 SMART SM00382 297 489 7.8E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 SMART SM00382 29 232 9.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 SUPERFAMILY SSF52540 272 511 1.41E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 265 0.032 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 493 523 0.84 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 SUPERFAMILY SSF52540 4 254 4.72E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 Pfam PF00005 ABC transporter 21 182 3.4E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 Pfam PF00005 ABC transporter 288 440 7.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 Gene3D G3DSA:3.40.50.300 1 268 1.7E-58 T 28-03-2018 DDI_RS00625 71790d33ef482bd6f42c9dd80eb7c67e 531 Gene3D G3DSA:3.40.50.300 269 520 6.4E-66 T 28-03-2018 DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 Gene3D G3DSA:3.40.366.10 169 283 1.4E-18 T 28-03-2018 DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 SUPERFAMILY SSF55048 120 178 3.66E-10 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 Gene3D G3DSA:3.40.366.10 2 135 3.8E-21 T 28-03-2018 DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 SUPERFAMILY SSF52151 184 282 7.19E-48 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 SUPERFAMILY SSF52151 2 119 7.19E-48 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 289 2.1E-98 T 28-03-2018 IPR017554 Malonate decarboxylase, McdH subunit DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 Pfam PF00698 Acyl transferase domain 5 281 6.8E-29 T 28-03-2018 IPR014043 Acyl transferase DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 PIRSF PIRSF000446 1 292 9.7E-55 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 Gene3D G3DSA:3.30.70.250 136 168 9.5E-12 T 28-03-2018 DDI_RS06495 aa3e44fbe864dc14be6cad08e159a617 302 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 288 2.5E-16 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 Pfam PF05099 Tellurite resistance protein TerB 37 170 2.7E-9 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 SUPERFAMILY SSF158682 29 180 3.01E-22 T 28-03-2018 DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 Gene3D G3DSA:1.10.3680.10 41 172 1.4E-22 T 28-03-2018 IPR029024 TerB-like DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 SMART SM00271 281 346 4.8E-10 T 28-03-2018 IPR001623 DnaJ domain DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 347 34.353 T 28-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 Gene3D G3DSA:1.10.287.110 173 345 7.0E-14 T 28-03-2018 IPR001623 DnaJ domain DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 SUPERFAMILY SSF46565 282 342 9.29E-19 T 28-03-2018 IPR001623 DnaJ domain DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 SUPERFAMILY SSF46565 132 253 9.29E-19 T 28-03-2018 IPR001623 DnaJ domain DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 Pfam PF00226 DnaJ domain 286 342 3.5E-8 T 28-03-2018 IPR001623 DnaJ domain DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 PRINTS PR00625 DnaJ domain signature 326 346 7.7E-5 T 28-03-2018 IPR001623 DnaJ domain DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 PRINTS PR00625 DnaJ domain signature 302 317 7.7E-5 T 28-03-2018 IPR001623 DnaJ domain DDI_RS16920 a0a93a3733a7140df3c47b62b635cf48 348 PRINTS PR00625 DnaJ domain signature 284 302 7.7E-5 T 28-03-2018 IPR001623 DnaJ domain DDI_RS08750 eace1b481fa08d9bfb7313947b356a4e 213 Gene3D G3DSA:3.20.20.70 1 213 1.3E-29 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS08750 eace1b481fa08d9bfb7313947b356a4e 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DDI_RS08750 eace1b481fa08d9bfb7313947b356a4e 213 SUPERFAMILY SSF51569 3 209 3.11E-68 T 28-03-2018 DDI_RS08750 eace1b481fa08d9bfb7313947b356a4e 213 Pfam PF01081 KDPG and KHG aldolase 9 203 1.2E-89 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DDI_RS08750 eace1b481fa08d9bfb7313947b356a4e 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.5E-85 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DDI_RS08750 eace1b481fa08d9bfb7313947b356a4e 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DDI_RS21135 d91059540f2f2287276a1436e74ed6ed 372 Gene3D G3DSA:3.40.50.2000 10 187 1.4E-5 T 28-03-2018 DDI_RS21135 d91059540f2f2287276a1436e74ed6ed 372 Pfam PF00534 Glycosyl transferases group 1 191 340 1.7E-25 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 DDI_RS21135 d91059540f2f2287276a1436e74ed6ed 372 Pfam PF13439 Glycosyltransferase Family 4 14 178 1.3E-20 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 DDI_RS21135 d91059540f2f2287276a1436e74ed6ed 372 SUPERFAMILY SSF53756 2 371 9.42E-71 T 28-03-2018 DDI_RS21135 d91059540f2f2287276a1436e74ed6ed 372 Gene3D G3DSA:3.40.50.2000 188 355 5.8E-37 T 28-03-2018 DDI_RS18085 0b261b67f9ae947dfff1afed09c193c6 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.3 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DDI_RS18085 0b261b67f9ae947dfff1afed09c193c6 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 28-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18085 0b261b67f9ae947dfff1afed09c193c6 100 SUPERFAMILY SSF54189 6 97 1.8E-30 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18085 0b261b67f9ae947dfff1afed09c193c6 100 Pfam PF00276 Ribosomal protein L23 9 95 2.3E-31 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DDI_RS18085 0b261b67f9ae947dfff1afed09c193c6 100 Gene3D G3DSA:3.30.70.330 6 100 9.0E-31 T 28-03-2018 DDI_RS06830 4303386e6d265e6b33097cbd7549865a 619 Gene3D G3DSA:3.30.70.270 124 367 4.0E-34 T 28-03-2018 DDI_RS06830 4303386e6d265e6b33097cbd7549865a 619 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 89 367 5.6E-37 T 28-03-2018 IPR000477 Reverse transcriptase domain DDI_RS06830 4303386e6d265e6b33097cbd7549865a 619 SUPERFAMILY SSF56672 304 372 1.46E-48 T 28-03-2018 DDI_RS06830 4303386e6d265e6b33097cbd7549865a 619 SUPERFAMILY SSF56672 50 237 1.46E-48 T 28-03-2018 DDI_RS06830 4303386e6d265e6b33097cbd7549865a 619 Pfam PF01348 Type II intron maturase 395 490 5.0E-9 T 28-03-2018 IPR024937 Domain X GO:0006397 DDI_RS11890 fac73ac7d5fda2b3b42a9f59e99957e4 172 SUPERFAMILY SSF54637 4 169 5.37E-57 T 28-03-2018 IPR029069 HotDog domain DDI_RS11890 fac73ac7d5fda2b3b42a9f59e99957e4 172 Gene3D G3DSA:3.10.129.10 1 172 1.2E-49 T 28-03-2018 DDI_RS11890 fac73ac7d5fda2b3b42a9f59e99957e4 172 Pfam PF07977 FabA-like domain 29 158 9.3E-53 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS11890 fac73ac7d5fda2b3b42a9f59e99957e4 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 171 3.2E-94 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS11890 fac73ac7d5fda2b3b42a9f59e99957e4 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.396 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS10745 a96eaccb87d603766e61bd00ca3a6f84 196 Pfam PF07484 Phage Tail Collar Domain 60 107 4.6E-14 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS10745 a96eaccb87d603766e61bd00ca3a6f84 196 SUPERFAMILY SSF88874 58 195 1.18E-34 T 28-03-2018 DDI_RS10745 a96eaccb87d603766e61bd00ca3a6f84 196 Gene3D G3DSA:4.10.1070.10 105 188 3.9E-14 T 28-03-2018 DDI_RS10745 a96eaccb87d603766e61bd00ca3a6f84 196 Gene3D G3DSA:3.90.1340.10 52 104 1.3E-17 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS20570 1807877e5009497e412b9d1dddad35e7 239 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 5 231 2.8E-89 T 28-03-2018 IPR017792 Urea carboxylase-associated protein 2 DDI_RS20570 1807877e5009497e412b9d1dddad35e7 239 Pfam PF09347 Domain of unknown function (DUF1989) 8 178 1.1E-51 T 28-03-2018 IPR018959 Domain of unknown function DUF1989 DDI_RS20805 bd2f2e66326abbac429bbfc7ee2f3945 143 SUPERFAMILY SSF54593 1 132 4.51E-11 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS20805 bd2f2e66326abbac429bbfc7ee2f3945 143 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 108 6.1E-12 T 28-03-2018 DDI_RS20805 bd2f2e66326abbac429bbfc7ee2f3945 143 Gene3D G3DSA:3.10.180.10 1 130 7.1E-9 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 47 328 1.1E-143 T 28-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 SUPERFAMILY SSF88946 56 164 1.7E-45 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 Gene3D G3DSA:1.10.10.10 256 325 6.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 Pfam PF04545 Sigma-70, region 4 262 315 2.7E-15 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 SUPERFAMILY SSF88659 167 241 8.28E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 Gene3D G3DSA:1.10.601.10 2 163 1.9E-59 T 28-03-2018 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 Pfam PF04542 Sigma-70 region 2 94 163 3.7E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 87 4.0E-11 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 Gene3D G3DSA:1.10.10.10 164 214 1.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 SUPERFAMILY SSF88659 225 320 4.3E-23 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 Pfam PF04539 Sigma-70 region 3 174 248 4.9E-21 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 1.5E-35 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15390 99a09225eadf9f57d7e5ff6ae2577f22 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 8 328 39.791 T 28-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 Pfam PF00175 Oxidoreductase NAD-binding domain 134 225 2.0E-4 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 Gene3D G3DSA:3.40.50.80 128 241 2.5E-18 T 28-03-2018 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 SUPERFAMILY SSF63380 24 122 1.48E-23 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 Gene3D G3DSA:3.10.20.30 242 346 5.1E-19 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 268 334 3.1E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 PRINTS PR00409 Phthalate dioxygenase reductase family signature 212 220 8.8E-38 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 PRINTS PR00409 Phthalate dioxygenase reductase family signature 62 74 8.8E-38 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 PRINTS PR00409 Phthalate dioxygenase reductase family signature 158 167 8.8E-38 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 PRINTS PR00409 Phthalate dioxygenase reductase family signature 133 152 8.8E-38 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 PRINTS PR00409 Phthalate dioxygenase reductase family signature 52 62 8.8E-38 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 PRINTS PR00409 Phthalate dioxygenase reductase family signature 74 88 8.8E-38 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 PRINTS PR00409 Phthalate dioxygenase reductase family signature 98 112 8.8E-38 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 294 302 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 Gene3D G3DSA:2.40.30.10 20 122 1.1E-13 T 28-03-2018 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 SUPERFAMILY SSF54292 234 346 1.27E-22 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS01345 9c3f64d3597a63553f27bc2bac73a471 346 SUPERFAMILY SSF52343 120 248 4.06E-24 T 28-03-2018 DDI_RS10735 a5568ab70b2eb5a90a5b0855563c6384 137 Pfam PF07484 Phage Tail Collar Domain 1 47 4.4E-13 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS10735 a5568ab70b2eb5a90a5b0855563c6384 137 Gene3D G3DSA:4.10.1070.10 45 129 5.2E-24 T 28-03-2018 DDI_RS10735 a5568ab70b2eb5a90a5b0855563c6384 137 Gene3D G3DSA:3.90.1340.10 1 44 4.6E-16 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS10735 a5568ab70b2eb5a90a5b0855563c6384 137 SUPERFAMILY SSF88874 1 136 1.02E-39 T 28-03-2018 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 SUPERFAMILY SSF54368 3 100 9.55E-37 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 SUPERFAMILY SSF55931 102 468 3.34E-138 T 28-03-2018 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 28-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 9.7E-216 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.0E-31 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 9.4E-139 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 SMART SM01230 102 379 5.2E-151 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 Gene3D G3DSA:3.30.590.10 105 457 2.6E-121 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DDI_RS19810 5bc763e51b181b3c85bab44e09c94b4f 469 Gene3D G3DSA:3.10.20.70 2 104 3.2E-28 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Pfam PF00072 Response regulator receiver domain 831 939 9.0E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 712 802 8.6E-29 T 28-03-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 SUPERFAMILY SSF55874 524 700 4.32E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 SMART SM00388 470 535 4.3E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 SUPERFAMILY SSF52172 827 947 2.56E-40 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 SMART SM00448 828 939 5.6E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Gene3D G3DSA:3.40.50.2300 814 954 7.6E-43 T 28-03-2018 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 SUPERFAMILY SSF47384 453 536 6.08E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 SUPERFAMILY SSF52172 704 816 5.96E-27 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 534 9.6E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 SMART SM00387 582 694 6.6E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 692 2.3E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Gene3D G3DSA:1.10.287.130 474 531 2.3E-19 T 28-03-2018 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Gene3D G3DSA:3.30.450.20 296 473 4.3E-6 T 28-03-2018 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 26 944 26.767 T 28-03-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 8.3E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 8.3E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 8.3E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 8.3E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS04540 95b394fe5bafe0beb13c2854b3e8ee6a 954 Gene3D G3DSA:3.30.565.10 539 701 1.7E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10955 0ad02fe89ef719b8b02a40afc3ff20d3 313 Pfam PF01171 PP-loop family 42 204 2.6E-13 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DDI_RS10955 0ad02fe89ef719b8b02a40afc3ff20d3 313 Gene3D G3DSA:3.40.50.620 8 248 3.4E-38 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS10955 0ad02fe89ef719b8b02a40afc3ff20d3 313 PIRSF PIRSF004976 2 273 2.7E-76 T 28-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 DDI_RS10955 0ad02fe89ef719b8b02a40afc3ff20d3 313 SUPERFAMILY SSF52402 17 236 3.99E-54 T 28-03-2018 DDI_RS10955 0ad02fe89ef719b8b02a40afc3ff20d3 313 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.624 T 28-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 DDI_RS05540 eaaccb4528c61d56aa75c7704fddce27 485 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 13 166 1.2E-51 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 DDI_RS05540 eaaccb4528c61d56aa75c7704fddce27 485 Pfam PF01048 Phosphorylase superfamily 270 432 3.9E-19 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDI_RS05540 eaaccb4528c61d56aa75c7704fddce27 485 SUPERFAMILY SSF53167 10 485 7.99E-153 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDI_RS05540 eaaccb4528c61d56aa75c7704fddce27 485 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 12 485 1.1E-228 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 DDI_RS05540 eaaccb4528c61d56aa75c7704fddce27 485 Hamap MF_01932 AMP nucleosidase [amn]. 4 485 58.019 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 DDI_RS05540 eaaccb4528c61d56aa75c7704fddce27 485 Gene3D G3DSA:3.30.1730.10 8 171 8.8E-49 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 DDI_RS05540 eaaccb4528c61d56aa75c7704fddce27 485 Gene3D G3DSA:3.40.50.1580 175 468 3.6E-66 T 28-03-2018 DDI_RS11695 ec95f05c843bf0586e4c9db3f366b296 197 Pfam PF13036 Peptidoglycan-synthase activator LpoB 61 193 3.3E-34 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB DDI_RS11695 ec95f05c843bf0586e4c9db3f366b296 197 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 195 36.219 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB DDI_RS11695 ec95f05c843bf0586e4c9db3f366b296 197 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 196 1.1E-47 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB DDI_RS11695 ec95f05c843bf0586e4c9db3f366b296 197 Gene3D G3DSA:3.40.50.10070 67 197 2.0E-12 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PIRSF PIRSF004557 12 441 1.1E-123 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.931 T 28-03-2018 IPR026593 Protein translocase subunit SecY DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.6E-140 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.1E-97 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 Gene3D G3DSA:1.10.3370.10 10 439 8.5E-160 T 28-03-2018 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 SUPERFAMILY SSF103491 16 424 1.7E-133 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS17995 f3b5b179438d9fa00dd2a4b71fb6dd92 443 Pfam PF00344 SecY translocase 76 417 2.5E-119 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 36.456 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Gene3D G3DSA:2.160.10.10 207 340 3.2E-22 T 28-03-2018 DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 9 329 1.9E-125 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 5.8E-8 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 7.6E-7 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 2.0E-7 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 89 1.9E-23 T 28-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Gene3D G3DSA:2.160.10.10 146 206 2.8E-16 T 28-03-2018 DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 SUPERFAMILY SSF51161 33 316 1.6E-87 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.23 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS03775 391fc18a0a7a859bc81c37053747b523 340 Gene3D G3DSA:2.160.10.10 23 145 4.8E-17 T 28-03-2018 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 SMART SM00387 339 451 8.1E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 SUPERFAMILY SSF158472 178 225 2.09E-8 T 28-03-2018 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 SMART SM00388 230 294 4.0E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 1.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 1.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 1.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 1.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 Gene3D G3DSA:3.30.565.10 299 452 4.4E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 Gene3D G3DSA:1.10.287.130 235 289 6.8E-13 T 28-03-2018 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 Gene3D G3DSA:3.30.450.20 129 234 3.6E-4 T 28-03-2018 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 449 1.2E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 Pfam PF00672 HAMP domain 178 225 5.2E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 SMART SM00304 177 229 1.1E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 292 2.2E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 SUPERFAMILY SSF55874 283 449 1.1E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS13650 940bf07ac5d025006bd4be8b194bbc63 452 SUPERFAMILY SSF47384 213 292 1.45E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS13470 0c010fd313bebbcab53cfec8797d02a5 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 126.018 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 DDI_RS13470 0c010fd313bebbcab53cfec8797d02a5 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 5.4E-106 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 DDI_RS13470 0c010fd313bebbcab53cfec8797d02a5 240 SUPERFAMILY SSF56300 3 236 3.28E-30 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS13470 0c010fd313bebbcab53cfec8797d02a5 240 Pfam PF00149 Calcineurin-like phosphoesterase 3 199 1.9E-7 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDI_RS13470 0c010fd313bebbcab53cfec8797d02a5 240 Gene3D G3DSA:3.60.21.10 2 221 7.3E-21 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS11130 baea0fc1987573de0b641114b9e3b5ed 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 6.3E-40 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 DDI_RS11130 baea0fc1987573de0b641114b9e3b5ed 108 Pfam PF01253 Translation initiation factor SUI1 32 101 1.8E-18 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 DDI_RS11130 baea0fc1987573de0b641114b9e3b5ed 108 PIRSF PIRSF037511 1 108 6.4E-35 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 DDI_RS11130 baea0fc1987573de0b641114b9e3b5ed 108 SUPERFAMILY SSF55159 9 104 2.62E-24 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 DDI_RS11130 baea0fc1987573de0b641114b9e3b5ed 108 Gene3D G3DSA:3.30.780.10 16 106 1.0E-19 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 DDI_RS18515 d095cc9ca7fdb07b6011be0b2c7480d8 106 SUPERFAMILY SSF52821 2 99 4.19E-26 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS18515 d095cc9ca7fdb07b6011be0b2c7480d8 106 SMART SM00450 7 101 2.3E-16 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS18515 d095cc9ca7fdb07b6011be0b2c7480d8 106 Pfam PF00581 Rhodanese-like domain 18 96 1.2E-12 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS18515 d095cc9ca7fdb07b6011be0b2c7480d8 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 104 30.688 T 28-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 DDI_RS18515 d095cc9ca7fdb07b6011be0b2c7480d8 106 Gene3D G3DSA:3.40.250.10 1 106 3.4E-25 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS12165 deed538d7a7a9240c1a1c3ee4ebcdef7 165 Pfam PF01584 CheW-like domain 18 154 3.8E-37 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS12165 deed538d7a7a9240c1a1c3ee4ebcdef7 165 SUPERFAMILY SSF50341 17 156 3.66E-39 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS12165 deed538d7a7a9240c1a1c3ee4ebcdef7 165 Gene3D G3DSA:2.40.50.180 35 98 5.4E-19 T 28-03-2018 DDI_RS12165 deed538d7a7a9240c1a1c3ee4ebcdef7 165 SMART SM00260 14 151 2.0E-45 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS12165 deed538d7a7a9240c1a1c3ee4ebcdef7 165 Gene3D G3DSA:2.30.30.40 99 145 2.3E-17 T 28-03-2018 DDI_RS09665 63c0ba874325067edb946d294a84f8fa 574 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 120 133 - T 28-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DDI_RS09665 63c0ba874325067edb946d294a84f8fa 574 SUPERFAMILY SSF49899 473 571 5.7E-6 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain DDI_RS09665 63c0ba874325067edb946d294a84f8fa 574 Gene3D G3DSA:2.115.10.20 125 444 1.5E-75 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain DDI_RS09665 63c0ba874325067edb946d294a84f8fa 574 SMART SM00640 120 533 4.6E-55 T 28-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DDI_RS09665 63c0ba874325067edb946d294a84f8fa 574 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 120 425 1.0E-67 T 28-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DDI_RS09665 63c0ba874325067edb946d294a84f8fa 574 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 514 559 5.4E-5 T 28-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DDI_RS09665 63c0ba874325067edb946d294a84f8fa 574 SUPERFAMILY SSF75005 110 430 1.24E-75 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain DDI_RS09665 63c0ba874325067edb946d294a84f8fa 574 Gene3D G3DSA:2.60.120.560 445 568 4.1E-6 T 28-03-2018 DDI_RS16460 0dba8340adc436f6e09dae51284fd872 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 166 342 4.7E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS16460 0dba8340adc436f6e09dae51284fd872 350 Gene3D G3DSA:1.10.3720.10 11 338 7.4E-45 T 28-03-2018 DDI_RS16460 0dba8340adc436f6e09dae51284fd872 350 SUPERFAMILY SSF161098 128 350 4.17E-66 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS16460 0dba8340adc436f6e09dae51284fd872 350 SUPERFAMILY SSF161098 21 63 4.17E-66 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 SUPERFAMILY SSF52954 328 423 2.94E-22 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 SUPERFAMILY SSF55681 5 317 1.67E-105 T 28-03-2018 DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 3.4E-155 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 Gene3D G3DSA:3.40.50.800 328 424 1.2E-15 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.3E-47 T 28-03-2018 DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.298 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 Gene3D G3DSA:3.30.930.10 2 324 3.3E-75 T 28-03-2018 DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 Pfam PF03129 Anticodon binding domain 343 420 1.2E-10 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS14015 da4b2ce652e62fa61e47cfd2c7f0db1c 424 PIRSF PIRSF001549 2 423 3.4E-127 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 Pfam PF06826 Predicted Permease Membrane Region 17 181 1.7E-36 T 28-03-2018 IPR006512 YidE/YbjL duplication DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 Pfam PF06826 Predicted Permease Membrane Region 385 554 1.2E-42 T 28-03-2018 IPR006512 YidE/YbjL duplication DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 Pfam PF02080 TrkA-C domain 305 372 2.1E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 Pfam PF02080 TrkA-C domain 227 283 4.2E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 SUPERFAMILY SSF116726 291 374 9.68E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 SUPERFAMILY SSF116726 227 284 4.19E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 Gene3D G3DSA:3.30.70.1450 295 375 1.9E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 5.8E-37 T 28-03-2018 IPR006512 YidE/YbjL duplication DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 1.5E-43 T 28-03-2018 IPR006512 YidE/YbjL duplication DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 Gene3D G3DSA:3.30.70.1450 216 291 9.4E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS07935 cc3a5b498bf926749011534682395aaf 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 56.961 T 28-03-2018 IPR023017 Transport protein YbjL, putative DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 SUPERFAMILY SSF69279 13 185 6.23E-56 T 28-03-2018 DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 SUPERFAMILY SSF69255 362 449 6.54E-33 T 28-03-2018 DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 Pfam PF05954 Phage late control gene D protein (GPD) 30 327 3.0E-87 T 28-03-2018 DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 Gene3D G3DSA:2.40.50.230 368 450 3.9E-35 T 28-03-2018 IPR006531 Gp5 N-terminal DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 SUPERFAMILY SSF69279 188 363 1.19E-39 T 28-03-2018 DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 518 1.9E-198 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 Gene3D G3DSA:3.55.50.10 98 189 4.1E-27 T 28-03-2018 DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 SUPERFAMILY SSF69349 440 617 1.96E-43 T 28-03-2018 DDI_RS07005 8732f34d47a1b4ceb86488390a1a4ee9 617 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 501 1.7E-146 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DDI_RS21040 fb380e0264a8cc66ad34ff5cd5c867b1 321 SUPERFAMILY SSF54826 3 111 5.05E-27 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS21040 fb380e0264a8cc66ad34ff5cd5c867b1 321 Pfam PF13378 Enolase C-terminal domain-like 133 297 2.6E-26 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS21040 fb380e0264a8cc66ad34ff5cd5c867b1 321 SMART SM00922 130 223 1.5E-16 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS21040 fb380e0264a8cc66ad34ff5cd5c867b1 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 9 109 4.5E-9 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DDI_RS21040 fb380e0264a8cc66ad34ff5cd5c867b1 321 Gene3D G3DSA:3.20.20.120 114 321 1.5E-41 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS21040 fb380e0264a8cc66ad34ff5cd5c867b1 321 Gene3D G3DSA:3.30.390.10 2 113 2.6E-22 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS21040 fb380e0264a8cc66ad34ff5cd5c867b1 321 SUPERFAMILY SSF51604 117 308 2.62E-50 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS21040 fb380e0264a8cc66ad34ff5cd5c867b1 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 Gene3D G3DSA:3.40.50.300 174 359 4.3E-21 T 28-03-2018 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 866 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 SUPERFAMILY SSF52540 553 846 2.61E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 332 1.4E-8 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 715 729 8.0E-29 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 8.0E-29 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 682 700 8.0E-29 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 671 8.0E-29 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 Gene3D G3DSA:3.40.50.300 548 781 4.7E-32 T 28-03-2018 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 638 656 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 SUPERFAMILY SSF81923 11 126 1.39E-11 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 Gene3D G3DSA:1.10.1780.10 5 160 5.3E-20 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 SMART SM00382 215 361 2.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 SMART SM00382 604 758 9.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 SMART SM01086 782 874 3.1E-5 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 SUPERFAMILY SSF52540 178 499 2.45E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 Gene3D G3DSA:1.10.8.60 360 547 8.5E-40 T 28-03-2018 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 Pfam PF07724 AAA domain (Cdc48 subfamily) 603 776 2.2E-36 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 Gene3D G3DSA:1.10.8.60 782 877 3.8E-9 T 28-03-2018 DDI_RS06630 7486e1cdcc02159c43214e4e5992f52f 878 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 855 1.0E-7 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS03995 426383e361ae9bec6f0e8ec81387482a 176 Gene3D G3DSA:3.40.630.30 2 173 4.6E-35 T 28-03-2018 DDI_RS03995 426383e361ae9bec6f0e8ec81387482a 176 Pfam PF13420 Acetyltransferase (GNAT) domain 8 160 4.4E-15 T 28-03-2018 DDI_RS03995 426383e361ae9bec6f0e8ec81387482a 176 SUPERFAMILY SSF55729 6 168 6.35E-33 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS19995 da913e87793b59cbb851254fab0888a1 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.4E-38 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DDI_RS19995 da913e87793b59cbb851254fab0888a1 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.166 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DDI_RS19995 da913e87793b59cbb851254fab0888a1 156 SUPERFAMILY SSF81573 63 121 1.96E-15 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain DDI_RS19995 da913e87793b59cbb851254fab0888a1 156 Gene3D G3DSA:1.20.5.620 62 122 1.0E-15 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain DDI_RS19995 da913e87793b59cbb851254fab0888a1 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.8E-60 T 28-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 DDI_RS02900 35b115c2f3b674d0e9a78446dabeed5d 398 SUPERFAMILY SSF56349 109 386 1.47E-57 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS02900 35b115c2f3b674d0e9a78446dabeed5d 398 Pfam PF13356 Arm DNA-binding domain 8 93 1.4E-15 T 28-03-2018 IPR025166 Integrase, DNA-binding domain DDI_RS02900 35b115c2f3b674d0e9a78446dabeed5d 398 Gene3D G3DSA:1.10.443.10 213 387 3.7E-24 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS02900 35b115c2f3b674d0e9a78446dabeed5d 398 Gene3D G3DSA:1.10.150.130 95 212 2.8E-18 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS02900 35b115c2f3b674d0e9a78446dabeed5d 398 Pfam PF00589 Phage integrase family 214 377 2.0E-28 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 Gene3D G3DSA:3.30.70.20 64 388 4.9E-4 T 28-03-2018 DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 5 397 2.3E-219 T 28-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 58 69 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 SUPERFAMILY SSF46548 8 83 4.01E-17 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 Gene3D G3DSA:3.30.70.20 21 63 9.3E-9 T 28-03-2018 DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 Pfam PF02754 Cysteine-rich domain 295 378 6.9E-14 T 28-03-2018 IPR004017 Cysteine-rich domain DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 Pfam PF02754 Cysteine-rich domain 165 251 8.9E-13 T 28-03-2018 IPR004017 Cysteine-rich domain DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 Gene3D G3DSA:3.30.70.20 1 20 0.033 T 28-03-2018 DDI_RS18605 d8529c52f6dd3ab36c005d72a15cb9c9 399 Pfam PF13183 4Fe-4S dicluster domain 8 72 1.5E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 Gene3D G3DSA:1.10.287.950 324 516 5.2E-48 T 28-03-2018 DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 Gene3D G3DSA:1.20.120.30 24 181 1.4E-11 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 Gene3D G3DSA:1.10.287.1060 247 323 0.03 T 28-03-2018 DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 174 3.6E-15 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 480 2.4E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 SMART SM00283 265 512 5.6E-85 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 3.3E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 3.3E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 3.3E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 3.3E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09850 cbc3cc455e616d4ae1fefd2bae8c0a0d 526 SUPERFAMILY SSF58104 233 516 1.44E-71 T 28-03-2018 DDI_RS11335 7b70296d17f7e7a6d64e3748a198ea5b 173 SUPERFAMILY SSF46689 68 117 6.91E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS11335 7b70296d17f7e7a6d64e3748a198ea5b 173 SMART SM00342 84 167 6.8E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS11335 7b70296d17f7e7a6d64e3748a198ea5b 173 SUPERFAMILY SSF46689 120 165 4.48E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS11335 7b70296d17f7e7a6d64e3748a198ea5b 173 Pfam PF12833 Helix-turn-helix domain 90 164 2.6E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS11335 7b70296d17f7e7a6d64e3748a198ea5b 173 Gene3D G3DSA:1.10.10.60 65 124 1.9E-14 T 28-03-2018 DDI_RS11335 7b70296d17f7e7a6d64e3748a198ea5b 173 Gene3D G3DSA:1.10.10.60 125 171 1.7E-11 T 28-03-2018 DDI_RS11335 7b70296d17f7e7a6d64e3748a198ea5b 173 Pfam PF06719 AraC-type transcriptional regulator N-terminus 10 55 1.8E-11 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DDI_RS12740 b48c57ec3f7610d7a214d8a0c53742b2 611 Pfam PF03600 Citrate transporter 17 555 1.4E-52 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DDI_RS12740 b48c57ec3f7610d7a214d8a0c53742b2 611 SUPERFAMILY SSF116726 324 398 6.28E-18 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS12740 b48c57ec3f7610d7a214d8a0c53742b2 611 Gene3D G3DSA:3.30.70.1450 323 399 1.1E-17 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS12740 b48c57ec3f7610d7a214d8a0c53742b2 611 Gene3D G3DSA:3.30.70.1450 218 299 2.7E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS12740 b48c57ec3f7610d7a214d8a0c53742b2 611 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 559 575 - T 28-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 DDI_RS12740 b48c57ec3f7610d7a214d8a0c53742b2 611 SUPERFAMILY SSF116726 232 295 1.44E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS12740 b48c57ec3f7610d7a214d8a0c53742b2 611 Pfam PF02080 TrkA-C domain 327 393 5.5E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS12740 b48c57ec3f7610d7a214d8a0c53742b2 611 Pfam PF02080 TrkA-C domain 232 299 1.1E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDI_RS21530 b2c23074cf8178df3efc23d58407753d 357 SUPERFAMILY SSF51726 2 353 1.33E-120 T 28-03-2018 DDI_RS21530 b2c23074cf8178df3efc23d58407753d 357 Gene3D G3DSA:3.20.20.210 1 357 1.2E-109 T 28-03-2018 DDI_RS21530 b2c23074cf8178df3efc23d58407753d 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDI_RS21530 b2c23074cf8178df3efc23d58407753d 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.454 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDI_RS21530 b2c23074cf8178df3efc23d58407753d 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDI_RS21530 b2c23074cf8178df3efc23d58407753d 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 2.8E-141 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDI_RS21530 b2c23074cf8178df3efc23d58407753d 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 3.3E-135 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 92.598 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 Pfam PF00206 Lyase 13 342 1.2E-116 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 SUPERFAMILY SSF48557 4 462 9.74E-162 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.8E-33 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.8E-33 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.8E-33 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.8E-33 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 1.5E-243 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 Gene3D G3DSA:1.20.200.10 138 414 1.8E-91 T 28-03-2018 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 Gene3D G3DSA:1.10.40.30 415 462 9.6E-27 T 28-03-2018 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 3.2E-5 T 28-03-2018 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 3.2E-5 T 28-03-2018 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 Pfam PF10415 Fumarase C C-terminus 408 461 2.4E-26 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS09295 b3b43dc0fee3972662ea5825e4db109a 465 Gene3D G3DSA:1.10.275.10 2 137 1.5E-58 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal DDI_RS05875 db68760d077a36676b93096863b120e3 263 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 130 146 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05875 db68760d077a36676b93096863b120e3 263 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 47 155 3.1E-23 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05875 db68760d077a36676b93096863b120e3 263 SUPERFAMILY SSF56770 35 168 1.57E-49 T 28-03-2018 DDI_RS05875 db68760d077a36676b93096863b120e3 263 Gene3D G3DSA:3.40.50.700 46 183 1.5E-28 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS18090 18aad5b4b40a5b9f4b449d4c9314873f 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 5.2E-64 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DDI_RS18090 18aad5b4b40a5b9f4b449d4c9314873f 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 9.6E-75 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18090 18aad5b4b40a5b9f4b449d4c9314873f 201 SUPERFAMILY SSF52166 10 200 1.07E-72 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 DDI_RS18090 18aad5b4b40a5b9f4b449d4c9314873f 201 Gene3D G3DSA:3.40.1370.10 141 199 1.1E-10 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 DDI_RS18090 18aad5b4b40a5b9f4b449d4c9314873f 201 Gene3D G3DSA:3.40.1370.10 4 140 9.1E-48 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 DDI_RS18090 18aad5b4b40a5b9f4b449d4c9314873f 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.843 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10195 3bac237b2a007e2bb324559cc6b9f5f0 129 SMART SM00530 17 72 1.4E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS10195 3bac237b2a007e2bb324559cc6b9f5f0 129 Gene3D G3DSA:1.10.260.40 10 81 1.9E-19 T 28-03-2018 DDI_RS10195 3bac237b2a007e2bb324559cc6b9f5f0 129 SUPERFAMILY SSF47413 9 78 1.66E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS10195 3bac237b2a007e2bb324559cc6b9f5f0 129 Pfam PF01381 Helix-turn-helix 20 72 5.5E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS10145 3bac237b2a007e2bb324559cc6b9f5f0 129 SMART SM00530 17 72 1.4E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS10145 3bac237b2a007e2bb324559cc6b9f5f0 129 Gene3D G3DSA:1.10.260.40 10 81 1.9E-19 T 28-03-2018 DDI_RS10145 3bac237b2a007e2bb324559cc6b9f5f0 129 SUPERFAMILY SSF47413 9 78 1.66E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS10145 3bac237b2a007e2bb324559cc6b9f5f0 129 Pfam PF01381 Helix-turn-helix 20 72 5.5E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS08645 66cf82dae4fe7dc4b9047e35744ffbe2 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 41.189 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DDI_RS08645 66cf82dae4fe7dc4b9047e35744ffbe2 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 242 6.2E-118 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DDI_RS08645 66cf82dae4fe7dc4b9047e35744ffbe2 247 PIRSF PIRSF006325 1 243 1.5E-122 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DDI_RS08645 66cf82dae4fe7dc4b9047e35744ffbe2 247 Pfam PF13649 Methyltransferase domain 60 158 8.3E-12 T 28-03-2018 DDI_RS08645 66cf82dae4fe7dc4b9047e35744ffbe2 247 Gene3D G3DSA:3.40.50.150 18 247 5.4E-39 T 28-03-2018 DDI_RS08645 66cf82dae4fe7dc4b9047e35744ffbe2 247 SUPERFAMILY SSF53335 20 242 1.23E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS05185 1216588b51c83f0abacfcc5b465694d8 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 168 2.3E-47 T 28-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 DDI_RS05185 1216588b51c83f0abacfcc5b465694d8 168 SUPERFAMILY SSF103088 55 167 3.66E-35 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS05185 1216588b51c83f0abacfcc5b465694d8 168 Pfam PF00691 OmpA family 67 162 4.1E-22 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS05185 1216588b51c83f0abacfcc5b465694d8 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 DDI_RS05185 1216588b51c83f0abacfcc5b465694d8 168 PRINTS PR01021 OMPA domain signature 68 90 4.2E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDI_RS05185 1216588b51c83f0abacfcc5b465694d8 168 PRINTS PR01021 OMPA domain signature 98 113 4.2E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDI_RS05185 1216588b51c83f0abacfcc5b465694d8 168 PRINTS PR01021 OMPA domain signature 113 129 4.2E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDI_RS05185 1216588b51c83f0abacfcc5b465694d8 168 Gene3D G3DSA:3.30.1330.60 38 168 4.8E-35 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 539 3.1E-260 T 28-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 Gene3D G3DSA:3.50.50.60 2 394 3.2E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 SUPERFAMILY SSF51905 10 323 1.19E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 483 3.1E-9 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 Pfam PF01266 FAD dependent oxidoreductase 11 360 2.7E-52 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 2.3E-21 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 2.3E-21 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 2.3E-21 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 2.3E-21 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18615 e6f3df5bfc6f14d1e5d64b3f02bcf6dc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 2.3E-21 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS02390 3e6509cd61e483d521d96072f4b7e050 238 Pfam PF13098 Thioredoxin-like domain 105 227 1.6E-28 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS02390 3e6509cd61e483d521d96072f4b7e050 238 SUPERFAMILY SSF52833 88 230 1.46E-41 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS02390 3e6509cd61e483d521d96072f4b7e050 238 Gene3D G3DSA:3.10.450.70 19 79 2.4E-19 T 28-03-2018 DDI_RS02390 3e6509cd61e483d521d96072f4b7e050 238 Gene3D G3DSA:3.40.30.10 99 236 8.9E-27 T 28-03-2018 DDI_RS02390 3e6509cd61e483d521d96072f4b7e050 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 77 3.9E-14 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DDI_RS02390 3e6509cd61e483d521d96072f4b7e050 238 SUPERFAMILY SSF54423 22 80 8.89E-18 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DDI_RS02390 3e6509cd61e483d521d96072f4b7e050 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDI_RS00630 2551f49f4586d5fe256a0b8a770fa970 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 8.9E-58 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS00630 2551f49f4586d5fe256a0b8a770fa970 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 2.4E-22 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS00630 2551f49f4586d5fe256a0b8a770fa970 159 Gene3D G3DSA:2.30.110.20 2 159 9.0E-45 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS00630 2551f49f4586d5fe256a0b8a770fa970 159 SUPERFAMILY SSF141452 5 156 3.4E-34 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS07700 e3110cb372af32f2f43c56fee2e12fd0 341 Gene3D G3DSA:1.10.3720.10 10 328 2.0E-40 T 28-03-2018 DDI_RS07700 e3110cb372af32f2f43c56fee2e12fd0 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 6.2E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07700 e3110cb372af32f2f43c56fee2e12fd0 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 46 4.3E-6 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS07700 e3110cb372af32f2f43c56fee2e12fd0 341 SUPERFAMILY SSF161098 136 322 1.09E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10670 4731fdbdc331e30786727ea2b8b443d9 74 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DDI_RS10670 4731fdbdc331e30786727ea2b8b443d9 74 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 2.4E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DDI_RS10670 4731fdbdc331e30786727ea2b8b443d9 74 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 2.4E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DDI_RS10670 4731fdbdc331e30786727ea2b8b443d9 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 65 4.1E-12 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DDI_RS10670 4731fdbdc331e30786727ea2b8b443d9 74 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 1.1E-20 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type DDI_RS10670 4731fdbdc331e30786727ea2b8b443d9 74 SUPERFAMILY SSF57716 34 71 7.41E-9 T 28-03-2018 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 Gene3D G3DSA:2.60.120.280 4 158 7.2E-14 T 28-03-2018 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 SMART SM00342 188 271 3.7E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 SUPERFAMILY SSF51215 17 157 1.31E-11 T 28-03-2018 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 SUPERFAMILY SSF46689 174 222 4.03E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 4.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 4.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 Pfam PF02311 AraC-like ligand binding domain 21 152 5.5E-14 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 274 51.063 T 28-03-2018 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 Pfam PF12833 Helix-turn-helix domain 194 272 3.9E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 Gene3D G3DSA:1.10.10.60 159 227 1.3E-11 T 28-03-2018 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 Gene3D G3DSA:1.10.10.60 228 275 8.0E-11 T 28-03-2018 DDI_RS01135 d5d9e8351f23a8a570187819587c3d33 276 SUPERFAMILY SSF46689 224 273 3.45E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 Gene3D G3DSA:3.90.1150.10 17 111 8.7E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 Gene3D G3DSA:3.90.1150.10 281 463 3.6E-75 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 Pfam PF01212 Beta-eliminating lyase 46 431 7.7E-96 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 SUPERFAMILY SSF53383 2 465 1.75E-146 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 PIRSF PIRSF001386 1 466 1.3E-225 T 28-03-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 105.013 T 28-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 2 465 1.8E-257 T 28-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 Gene3D G3DSA:3.40.640.10 112 264 0.0013 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS16835 c4167894967dc0f9e2775c5bcfc241c6 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 28-03-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 SMART SM01204 260 384 2.0E-21 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 SMART SM00283 409 645 6.7E-21 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 478 640 1.2E-27 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 Pfam PF10442 FIST C domain 274 381 2.6E-11 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 2.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 2.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 2.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 SMART SM00897 40 254 2.2E-19 T 28-03-2018 IPR013702 FIST domain, N-terminal DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 SUPERFAMILY SSF58104 415 639 9.02E-39 T 28-03-2018 DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 Pfam PF08495 FIST N domain 43 241 5.9E-16 T 28-03-2018 IPR013702 FIST domain, N-terminal DDI_RS09560 6b362b0e3ad7aecfbbfc94b719aef152 647 Gene3D G3DSA:1.10.287.950 427 641 3.7E-33 T 28-03-2018 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 186 1.9E-16 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 487 8.6E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 3.0E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 476 3.0E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 322 3.0E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 3.0E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 SUPERFAMILY SSF58104 253 520 7.72E-69 T 28-03-2018 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 SMART SM00283 272 519 3.0E-89 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 Gene3D G3DSA:1.10.287.950 328 523 1.1E-48 T 28-03-2018 DDI_RS19280 4871ee65bd89e8b9e060275bf2a8528b 560 Gene3D G3DSA:1.10.287.950 56 327 4.2E-18 T 28-03-2018 DDI_RS14505 8729ba10d38c06b1cb24a1c96f1901d0 239 Pfam PF03749 Sugar fermentation stimulation protein 13 225 4.1E-75 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein DDI_RS14505 8729ba10d38c06b1cb24a1c96f1901d0 239 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 227 1.0E-76 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein DDI_RS14505 8729ba10d38c06b1cb24a1c96f1901d0 239 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 55.674 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein DDI_RS00400 4f079fde06b148099015bc96193eced8 683 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 677 35.187 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA DDI_RS00400 4f079fde06b148099015bc96193eced8 683 SUPERFAMILY SSF53822 269 296 4.71E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS00400 4f079fde06b148099015bc96193eced8 683 SUPERFAMILY SSF53822 527 681 4.71E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS00400 4f079fde06b148099015bc96193eced8 683 SUPERFAMILY SSF53822 359 489 4.71E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS00400 4f079fde06b148099015bc96193eced8 683 Pfam PF04348 LppC putative lipoprotein 44 297 7.5E-48 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA DDI_RS00400 4f079fde06b148099015bc96193eced8 683 Pfam PF04348 LppC putative lipoprotein 357 677 1.1E-83 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA DDI_RS00400 4f079fde06b148099015bc96193eced8 683 Gene3D G3DSA:3.40.50.2300 480 670 6.0E-16 T 28-03-2018 DDI_RS00400 4f079fde06b148099015bc96193eced8 683 Gene3D G3DSA:3.40.50.2300 267 479 4.3E-37 T 28-03-2018 DDI_RS11830 2f62099df1c9d1cf96c49dfcefde8f1b 352 Pfam PF12368 Rhodanase C-terminal 246 308 4.9E-19 T 28-03-2018 IPR022111 Rhodanase, C-terminal DDI_RS11830 2f62099df1c9d1cf96c49dfcefde8f1b 352 Gene3D G3DSA:3.40.250.10 130 243 1.7E-27 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS11830 2f62099df1c9d1cf96c49dfcefde8f1b 352 SUPERFAMILY SSF52821 113 271 4.45E-31 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS11830 2f62099df1c9d1cf96c49dfcefde8f1b 352 SMART SM00450 136 237 1.3E-24 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS11830 2f62099df1c9d1cf96c49dfcefde8f1b 352 Pfam PF00581 Rhodanese-like domain 138 232 1.5E-13 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS11830 2f62099df1c9d1cf96c49dfcefde8f1b 352 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 37.784 T 28-03-2018 IPR020936 Uncharacterised protein family UPF0176 DDI_RS18060 d087c437527869405ac176db795d3999 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18060 d087c437527869405ac176db795d3999 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18060 d087c437527869405ac176db795d3999 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 3.9E-47 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DDI_RS18060 d087c437527869405ac176db795d3999 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.236 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18060 d087c437527869405ac176db795d3999 136 Gene3D G3DSA:3.90.1170.10 1 136 7.8E-51 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DDI_RS18060 d087c437527869405ac176db795d3999 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18060 d087c437527869405ac176db795d3999 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18060 d087c437527869405ac176db795d3999 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18060 d087c437527869405ac176db795d3999 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18060 d087c437527869405ac176db795d3999 136 SUPERFAMILY SSF54686 3 133 5.1E-55 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DDI_RS18060 d087c437527869405ac176db795d3999 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.2E-59 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17470 e3f7a03201b2900ab674af3feb0025ba 156 SUPERFAMILY SSF46785 18 148 6.5E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17470 e3f7a03201b2900ab674af3feb0025ba 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 3.4E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS17470 e3f7a03201b2900ab674af3feb0025ba 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 3.4E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS17470 e3f7a03201b2900ab674af3feb0025ba 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 3.4E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS17470 e3f7a03201b2900ab674af3feb0025ba 156 Pfam PF01047 MarR family 47 105 1.6E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS17470 e3f7a03201b2900ab674af3feb0025ba 156 SMART SM00347 40 140 3.8E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS17470 e3f7a03201b2900ab674af3feb0025ba 156 Gene3D G3DSA:1.10.10.10 2 156 2.3E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 PIRSF PIRSF010376 5 284 8.5E-84 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 Gene3D G3DSA:3.30.70.890 166 284 8.0E-27 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 SUPERFAMILY SSF54211 7 163 9.11E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 7 282 1.8E-100 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 SUPERFAMILY SSF55060 165 282 6.26E-36 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 276 32.164 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 Pfam PF08544 GHMP kinases C terminal 210 264 4.7E-5 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 Pfam PF00288 GHMP kinases N terminal domain 92 149 3.6E-10 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DDI_RS09625 be6be34ab9cd6016f418e7a32dfe07a9 290 Gene3D G3DSA:3.30.230.10 6 165 3.5E-47 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS01770 0e2b09a76fa54cf6a7891d0f8b405a94 184 Gene3D G3DSA:1.10.3290.10 4 184 4.9E-30 T 28-03-2018 IPR003812 Fido domain DDI_RS01770 0e2b09a76fa54cf6a7891d0f8b405a94 184 Pfam PF02661 Fic/DOC family 41 138 8.0E-17 T 28-03-2018 IPR003812 Fido domain DDI_RS01770 0e2b09a76fa54cf6a7891d0f8b405a94 184 SUPERFAMILY SSF140931 29 182 1.7E-33 T 28-03-2018 IPR003812 Fido domain DDI_RS00120 c2c9f1a7a186fb4c368929b0a170f2e2 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 2.5E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DDI_RS00120 c2c9f1a7a186fb4c368929b0a170f2e2 328 SUPERFAMILY SSF50129 1 144 8.07E-46 T 28-03-2018 IPR011032 GroES-like DDI_RS00120 c2c9f1a7a186fb4c368929b0a170f2e2 328 SUPERFAMILY SSF51735 115 291 1.15E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS00120 c2c9f1a7a186fb4c368929b0a170f2e2 328 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 1.1E-136 T 28-03-2018 IPR014188 Acrylyl-CoA reductase AcuI DDI_RS00120 c2c9f1a7a186fb4c368929b0a170f2e2 328 SMART SM00829 7 322 1.8E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DDI_RS00120 c2c9f1a7a186fb4c368929b0a170f2e2 328 Pfam PF00107 Zinc-binding dehydrogenase 158 283 1.5E-16 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DDI_RS00120 c2c9f1a7a186fb4c368929b0a170f2e2 328 Gene3D G3DSA:3.40.50.720 161 270 4.5E-12 T 28-03-2018 DDI_RS00120 c2c9f1a7a186fb4c368929b0a170f2e2 328 Gene3D G3DSA:3.90.180.10 1 160 7.4E-34 T 28-03-2018 DDI_RS15430 ca9c624e496cfa4ef8ed7b70b2d2c65d 207 SUPERFAMILY SSF52540 32 199 2.66E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15430 ca9c624e496cfa4ef8ed7b70b2d2c65d 207 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 34 205 38.098 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DDI_RS15430 ca9c624e496cfa4ef8ed7b70b2d2c65d 207 Gene3D G3DSA:3.40.50.300 31 207 1.1E-47 T 28-03-2018 DDI_RS15430 ca9c624e496cfa4ef8ed7b70b2d2c65d 207 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 18 201 1.0E-85 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DDI_RS15430 ca9c624e496cfa4ef8ed7b70b2d2c65d 207 Pfam PF01583 Adenylylsulphate kinase 35 188 1.5E-72 T 28-03-2018 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 48 275 7.8E-58 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 214 229 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 Gene3D G3DSA:2.40.37.10 265 420 5.8E-46 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 1.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 1.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 1.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 206 376 6.4E-24 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 SUPERFAMILY SSF50621 251 419 1.15E-55 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 38.241 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 Gene3D G3DSA:3.20.20.10 21 264 4.6E-46 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 11 418 2.6E-127 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 9.0E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 9.0E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 9.0E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 9.0E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS15915 e3b55a2a41211b7ff233314a2ddf44e2 420 SUPERFAMILY SSF51419 25 277 3.53E-56 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS04295 2e83b8d9b0eb31569b2d5acb76f4b0d6 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.7E-33 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS04295 2e83b8d9b0eb31569b2d5acb76f4b0d6 90 Gene3D G3DSA:4.10.520.10 1 90 5.2E-34 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 DDI_RS04295 2e83b8d9b0eb31569b2d5acb76f4b0d6 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DDI_RS04295 2e83b8d9b0eb31569b2d5acb76f4b0d6 90 SUPERFAMILY SSF47729 1 90 2.94E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 DDI_RS04295 2e83b8d9b0eb31569b2d5acb76f4b0d6 90 SMART SM00411 1 90 4.8E-44 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS04295 2e83b8d9b0eb31569b2d5acb76f4b0d6 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.9E-20 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS04295 2e83b8d9b0eb31569b2d5acb76f4b0d6 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.9E-20 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS04295 2e83b8d9b0eb31569b2d5acb76f4b0d6 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.9E-20 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS07645 6a97144dfd99ce8d3fc44101c06deb91 566 SUPERFAMILY SSF55781 226 351 1.05E-8 T 28-03-2018 IPR029016 GAF domain-like DDI_RS07645 6a97144dfd99ce8d3fc44101c06deb91 566 SMART SM00387 452 554 6.1E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS07645 6a97144dfd99ce8d3fc44101c06deb91 566 Pfam PF07694 5TMR of 5TMR-LYT 29 192 2.8E-42 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DDI_RS07645 6a97144dfd99ce8d3fc44101c06deb91 566 Gene3D G3DSA:3.30.565.10 333 551 1.8E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS07645 6a97144dfd99ce8d3fc44101c06deb91 566 Pfam PF06580 Histidine kinase 359 438 1.0E-24 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DDI_RS07645 6a97144dfd99ce8d3fc44101c06deb91 566 SUPERFAMILY SSF55874 414 548 2.62E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS07645 6a97144dfd99ce8d3fc44101c06deb91 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 550 1.9E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS07645 6a97144dfd99ce8d3fc44101c06deb91 566 Gene3D G3DSA:3.30.450.40 222 332 7.9E-4 T 28-03-2018 IPR029016 GAF domain-like DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 SUPERFAMILY SSF58104 235 509 2.49E-60 T 28-03-2018 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 478 4.1E-47 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 2.8E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 2.8E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 2.8E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 2.8E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 147 172 2.8E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 SMART SM00283 263 510 4.0E-69 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 SMART SM00086 80 120 0.0053 T 28-03-2018 IPR001610 PAC motif DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 Gene3D G3DSA:1.10.287.950 208 314 1.4E-10 T 28-03-2018 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 Gene3D G3DSA:1.10.287.950 315 509 1.5E-36 T 28-03-2018 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 Gene3D G3DSA:3.40.50.10600 7 128 2.0E-26 T 28-03-2018 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 SMART SM00091 8 75 0.0065 T 28-03-2018 IPR000014 PAS domain DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 SUPERFAMILY SSF55785 21 114 8.72E-24 T 28-03-2018 IPR000014 PAS domain DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 Pfam PF08447 PAS fold 31 114 2.8E-12 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 DDI_RS15565 8c2cdd75adb66e5be70ed368bf2e84a3 511 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 117 5.3E-12 T 28-03-2018 IPR000014 PAS domain DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 4.9E-24 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 2.1E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 46.859 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 SMART SM00433 35 625 4.4E-208 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 2.9E-58 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 Pfam PF00204 DNA gyrase B 219 385 2.8E-39 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 SUPERFAMILY SSF56719 389 622 7.32E-77 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 Pfam PF01751 Toprim domain 414 510 5.1E-12 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 Gene3D G3DSA:3.30.230.10 218 392 1.8E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 1.1E-153 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 SUPERFAMILY SSF54211 218 383 1.12E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 Gene3D G3DSA:3.30.565.10 18 217 7.8E-63 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 SMART SM00387 28 174 1.8E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 SUPERFAMILY SSF55874 6 216 1.72E-67 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS00455 5f1ad078afd0e4d002949d4717673543 631 Gene3D G3DSA:3.40.50.670 397 628 4.1E-77 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS02795 f09b244120cd85e619bfe53121fae2ad 647 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 326 646 7.9E-144 T 28-03-2018 IPR018659 Protein of unknown function DUF2090 DDI_RS02795 f09b244120cd85e619bfe53121fae2ad 647 SUPERFAMILY SSF53613 5 330 2.49E-73 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS02795 f09b244120cd85e619bfe53121fae2ad 647 Pfam PF00294 pfkB family carbohydrate kinase 8 323 1.8E-46 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB DDI_RS02795 f09b244120cd85e619bfe53121fae2ad 647 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 275 288 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS02795 f09b244120cd85e619bfe53121fae2ad 647 Gene3D G3DSA:3.20.20.70 346 647 3.4E-76 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS02795 f09b244120cd85e619bfe53121fae2ad 647 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 6 331 1.1E-128 T 28-03-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 DDI_RS02795 f09b244120cd85e619bfe53121fae2ad 647 Gene3D G3DSA:3.40.1190.20 7 336 4.3E-65 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 SUPERFAMILY SSF52467 185 371 2.45E-41 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 439 598 2.3E-41 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 6.3E-30 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 641 3.2E-282 T 28-03-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 475 494 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 Gene3D G3DSA:3.40.50.1220 222 387 3.4E-38 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 SUPERFAMILY SSF52518 3 208 2.03E-31 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 SUPERFAMILY SSF52518 415 626 3.75E-55 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 Gene3D G3DSA:3.40.50.970 398 623 5.5E-42 T 28-03-2018 DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 Gene3D G3DSA:3.40.50.970 1 221 6.2E-47 T 28-03-2018 DDI_RS02765 659ac0219ba54daacdf218048265cf27 643 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 196 9.3E-33 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 Pfam PF13098 Thioredoxin-like domain 480 573 4.3E-8 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 Gene3D G3DSA:2.60.40.1250 33 155 5.1E-36 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 ProSitePatterns PS00194 Thioredoxin family active site. 485 503 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 8 577 37.896 T 28-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 SUPERFAMILY SSF52833 464 574 6.56E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 183 386 1.2E-18 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 Pfam PF11412 Disulphide bond corrector protein DsbC 38 148 1.6E-31 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 Gene3D G3DSA:3.40.30.10 448 495 0.018 T 28-03-2018 DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 SUPERFAMILY SSF74863 38 151 2.35E-39 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DDI_RS01530 9d5b2cb995ac59c47273c04cd2375c4a 578 Gene3D G3DSA:3.40.30.10 496 578 1.5E-11 T 28-03-2018 DDI_RS00240 1e3cd1b99e17b8ef85f7248974a6096c 192 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 8 168 25.567 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 DDI_RS00240 1e3cd1b99e17b8ef85f7248974a6096c 192 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 167 2.4E-48 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 DDI_RS00240 1e3cd1b99e17b8ef85f7248974a6096c 192 Pfam PF03968 OstA-like protein 38 149 1.0E-27 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal DDI_RS00240 1e3cd1b99e17b8ef85f7248974a6096c 192 Gene3D G3DSA:2.60.450.10 28 165 3.7E-27 T 28-03-2018 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Gene3D G3DSA:1.10.3060.10 635 732 6.6E-30 T 28-03-2018 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Gene3D G3DSA:3.10.450.50 733 896 3.0E-56 T 28-03-2018 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Pfam PF07517 SecA DEAD-like domain 7 402 4.6E-131 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 SUPERFAMILY SSF81886 620 840 7.06E-86 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 SUPERFAMILY SSF81886 872 884 7.06E-86 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 SUPERFAMILY SSF81767 227 368 3.92E-44 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 ProSitePatterns PS01312 SecA family signature. 500 515 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 SMART SM00957 6 402 0.0 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 PRINTS PR00906 SecA protein signature 376 393 2.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 PRINTS PR00906 SecA protein signature 63 87 2.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 PRINTS PR00906 SecA protein signature 117 127 2.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 PRINTS PR00906 SecA protein signature 101 115 2.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 PRINTS PR00906 SecA protein signature 413 426 2.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 PRINTS PR00906 SecA protein signature 339 361 2.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 PRINTS PR00906 SecA protein signature 170 190 2.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 SUPERFAMILY SSF52540 368 415 2.92E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 SUPERFAMILY SSF52540 5 228 2.92E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Pfam PF07516 SecA Wing and Scaffold domain 617 830 2.7E-69 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.7E-40 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 SUPERFAMILY SSF52540 416 618 1.29E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Pfam PF02810 SEC-C motif 876 894 1.1E-10 T 28-03-2018 IPR004027 SEC-C motif DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.017 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Gene3D G3DSA:3.40.50.300 296 416 5.1E-8 T 28-03-2018 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Gene3D G3DSA:3.40.50.300 9 267 1.1E-55 T 28-03-2018 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 Gene3D G3DSA:3.40.50.300 417 634 1.4E-55 T 28-03-2018 DDI_RS16685 eab391ecc817f6af376924f8db82785b 897 SMART SM00958 228 358 1.2E-83 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 DDI_RS14090 6b0f3e426afd7a0f737db63d2c7bd1fc 404 Gene3D G3DSA:3.90.1150.10 233 404 5.0E-53 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS14090 6b0f3e426afd7a0f737db63d2c7bd1fc 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 56.023 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DDI_RS14090 6b0f3e426afd7a0f737db63d2c7bd1fc 404 Gene3D G3DSA:3.40.640.10 1 232 9.0E-52 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS14090 6b0f3e426afd7a0f737db63d2c7bd1fc 404 Pfam PF00266 Aminotransferase class-V 5 368 7.5E-91 T 28-03-2018 IPR000192 Aminotransferase class V domain DDI_RS14090 6b0f3e426afd7a0f737db63d2c7bd1fc 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DDI_RS14090 6b0f3e426afd7a0f737db63d2c7bd1fc 404 SUPERFAMILY SSF53383 5 390 3.32E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS14090 6b0f3e426afd7a0f737db63d2c7bd1fc 404 PIRSF PIRSF005572 2 384 1.4E-142 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 DDI_RS14090 6b0f3e426afd7a0f737db63d2c7bd1fc 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.0E-235 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 481 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 455 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 1.9E-77 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 548 8.6E-172 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 Pfam PF01019 Gamma-glutamyltranspeptidase 49 579 5.3E-183 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 375 399 - T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS12435 db90a8b2d584986a667ca1591c4e061a 587 SUPERFAMILY SSF56235 25 587 1.49E-185 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 SUPERFAMILY SSF52096 193 263 1.08E-67 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 SUPERFAMILY SSF52096 349 539 1.08E-67 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 Gene3D G3DSA:3.90.226.10 329 631 3.7E-58 T 28-03-2018 DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 SUPERFAMILY SSF50156 215 344 1.31E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 SMART SM00245 325 530 4.2E-74 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 193 550 7.0E-126 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 Gene3D G3DSA:3.30.750.44 155 244 6.7E-22 T 28-03-2018 DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 3.1E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 536 666 1.4E-39 T 28-03-2018 IPR020992 Tail specific protease, C-terminal DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 Gene3D G3DSA:2.30.42.10 245 328 2.9E-16 T 28-03-2018 DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 SMART SM00228 245 322 2.3E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS10610 9850dcaa22e1f20c7cc8f3cf0d6e0a48 673 Pfam PF03572 Peptidase family S41 355 528 5.6E-53 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DDI_RS15410 552f08bd938c84b1938c9e8ba242a330 165 Gene3D G3DSA:3.30.1330.50 1 158 1.6E-72 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDI_RS15410 552f08bd938c84b1938c9e8ba242a330 165 Pfam PF02542 YgbB family 1 154 1.4E-66 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDI_RS15410 552f08bd938c84b1938c9e8ba242a330 165 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 2.9E-71 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDI_RS15410 552f08bd938c84b1938c9e8ba242a330 165 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 28-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDI_RS15410 552f08bd938c84b1938c9e8ba242a330 165 SUPERFAMILY SSF69765 1 156 5.76E-65 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDI_RS15410 552f08bd938c84b1938c9e8ba242a330 165 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.882 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 SUPERFAMILY SSF46689 221 265 2.64E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 262 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 3.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 3.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 Gene3D G3DSA:1.10.10.60 173 221 9.8E-13 T 28-03-2018 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 SUPERFAMILY SSF51182 36 193 5.63E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 Gene3D G3DSA:1.10.10.60 222 265 1.1E-8 T 28-03-2018 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 Gene3D G3DSA:2.60.120.280 25 172 1.2E-9 T 28-03-2018 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 SMART SM00342 184 265 8.4E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS06715 17e480d031e8a903cd9fea883daa43af 265 Pfam PF12833 Helix-turn-helix domain 190 265 2.1E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 Gene3D G3DSA:3.40.50.300 611 939 2.5E-54 T 28-03-2018 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 SUPERFAMILY SSF52540 3 204 6.61E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 SUPERFAMILY SSF52540 441 569 6.61E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 SUPERFAMILY SSF52540 615 911 1.7E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.994 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 Gene3D G3DSA:3.30.190.20 127 248 1.6E-42 T 28-03-2018 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 Gene3D G3DSA:3.40.50.300 35 116 1.7E-4 T 28-03-2018 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 Gene3D G3DSA:1.10.8.280 285 405 3.1E-37 T 28-03-2018 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 Gene3D G3DSA:3.40.50.300 412 604 3.6E-21 T 28-03-2018 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 Gene3D G3DSA:3.40.50.300 3 34 0.0029 T 28-03-2018 DDI_RS16340 dca6432a8ddd8c7905a6449af44519d1 943 Pfam PF00005 ABC transporter 806 860 2.0E-5 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 Gene3D G3DSA:3.40.50.920 541 664 8.0E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 SUPERFAMILY SSF52518 5 321 3.21E-119 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 SMART SM00861 355 525 3.4E-70 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 SUPERFAMILY SSF52922 533 664 1.57E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 Gene3D G3DSA:3.40.50.970 1 365 1.2E-124 T 28-03-2018 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 Pfam PF02780 Transketolase, C-terminal domain 549 655 1.7E-18 T 28-03-2018 IPR033248 Transketolase, C-terminal domain DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 8.7E-169 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 3.5E-48 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 Gene3D G3DSA:3.40.50.970 366 540 1.3E-44 T 28-03-2018 DDI_RS17185 e63134da7cfde65bdfbafc63e83dbee7 664 SUPERFAMILY SSF52518 333 526 1.26E-69 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS13035 52c76d64324aaf3309b768dca7fb03dc 358 Pfam PF01032 FecCD transport family 46 354 8.8E-86 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 DDI_RS13035 52c76d64324aaf3309b768dca7fb03dc 358 SUPERFAMILY SSF81345 33 355 1.44E-75 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS13035 52c76d64324aaf3309b768dca7fb03dc 358 Gene3D G3DSA:1.10.3470.10 31 358 3.3E-63 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS16145 473349956cbcd36444bca21e55f743cd 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 22 128 2.3E-16 T 28-03-2018 IPR006522 Phage virion morphogensis protein DDI_RS16145 473349956cbcd36444bca21e55f743cd 149 Pfam PF05069 Phage virion morphogenesis family 9 144 6.6E-25 T 28-03-2018 IPR006522 Phage virion morphogensis protein DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 SMART SM00871 126 284 1.2E-21 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 Gene3D G3DSA:1.10.10.60 58 121 2.5E-13 T 28-03-2018 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 Pfam PF06445 GyrI-like small molecule binding domain 127 283 3.9E-21 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 Gene3D G3DSA:1.10.10.60 1 57 5.7E-14 T 28-03-2018 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 Gene3D G3DSA:3.20.80.10 122 285 1.4E-26 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.2E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.2E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 SMART SM00342 21 104 4.5E-32 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 SUPERFAMILY SSF55136 123 284 4.36E-53 T 28-03-2018 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 SUPERFAMILY SSF46689 57 109 2.11E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 SUPERFAMILY SSF46689 6 55 4.87E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS17105 79461ad2ad6da8538695f6e704888041 285 Pfam PF12833 Helix-turn-helix domain 27 105 5.3E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS06995 2cb4de5c99cc283ab6fa6b50bca9ead1 81 Gene3D G3DSA:1.10.260.40 6 81 9.4E-19 T 28-03-2018 DDI_RS06995 2cb4de5c99cc283ab6fa6b50bca9ead1 81 Pfam PF13560 Helix-turn-helix domain 17 74 1.3E-12 T 28-03-2018 DDI_RS06995 2cb4de5c99cc283ab6fa6b50bca9ead1 81 SMART SM00530 20 75 6.1E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS06995 2cb4de5c99cc283ab6fa6b50bca9ead1 81 SUPERFAMILY SSF47413 16 77 1.42E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS01600 8e92ea9f748d3e20d9368aff0086c5f2 298 SUPERFAMILY SSF53850 93 291 4.96E-23 T 28-03-2018 DDI_RS01600 8e92ea9f748d3e20d9368aff0086c5f2 298 Gene3D G3DSA:1.10.10.10 2 89 3.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01600 8e92ea9f748d3e20d9368aff0086c5f2 298 Gene3D G3DSA:3.40.190.10 94 183 7.1E-7 T 28-03-2018 DDI_RS01600 8e92ea9f748d3e20d9368aff0086c5f2 298 SUPERFAMILY SSF46785 8 91 2.29E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01600 8e92ea9f748d3e20d9368aff0086c5f2 298 Gene3D G3DSA:3.40.190.10 184 267 6.9E-9 T 28-03-2018 DDI_RS01600 8e92ea9f748d3e20d9368aff0086c5f2 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 7.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS01600 8e92ea9f748d3e20d9368aff0086c5f2 298 Pfam PF03466 LysR substrate binding domain 94 291 3.8E-19 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 Gene3D G3DSA:3.30.460.10 192 325 1.8E-41 T 28-03-2018 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 SUPERFAMILY SSF81301 180 392 8.17E-63 T 28-03-2018 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 SUPERFAMILY SSF55021 627 697 2.58E-6 T 28-03-2018 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 697 3.2E-287 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 SUPERFAMILY SSF109604 3 190 4.71E-75 T 28-03-2018 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 SMART SM00954 235 345 1.5E-63 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 SUPERFAMILY SSF81271 375 447 8.07E-21 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 Pfam PF02824 TGS domain 388 447 2.3E-20 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 SMART SM00471 41 153 1.2E-11 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 Gene3D G3DSA:3.10.20.30 382 457 1.2E-22 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 Gene3D G3DSA:3.30.70.260 621 699 5.4E-11 T 28-03-2018 DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 Pfam PF13328 HD domain 26 175 3.0E-53 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 Pfam PF13291 ACT domain 620 697 5.5E-16 T 28-03-2018 IPR002912 ACT domain DDI_RS19755 080698b1cb194fc52ecd5aa9632c2f51 700 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 2.0E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 DDI_RS21165 7fe2318b50bb9daad95e66ea816b7e0f 424 Gene3D G3DSA:1.20.5.730 41 125 2.7E-5 T 28-03-2018 DDI_RS21165 7fe2318b50bb9daad95e66ea816b7e0f 424 SUPERFAMILY SSF51261 226 422 4.71E-48 T 28-03-2018 IPR011055 Duplicated hybrid motif DDI_RS21165 7fe2318b50bb9daad95e66ea816b7e0f 424 Pfam PF01551 Peptidase family M23 325 418 3.1E-27 T 28-03-2018 IPR016047 Peptidase M23 DDI_RS21165 7fe2318b50bb9daad95e66ea816b7e0f 424 Gene3D G3DSA:2.70.70.10 170 424 1.1E-35 T 28-03-2018 DDI_RS09240 ce34596d47ffa17adf363b2f3166468b 566 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 6 550 2.9E-228 T 28-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 DDI_RS09240 ce34596d47ffa17adf363b2f3166468b 566 Hamap MF_00520 Ribulokinase [araB]. 4 561 53.212 T 28-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 DDI_RS09240 ce34596d47ffa17adf363b2f3166468b 566 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 294 504 7.5E-33 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDI_RS09240 ce34596d47ffa17adf363b2f3166468b 566 PIRSF PIRSF000538 4 557 7.0E-39 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDI_RS09240 ce34596d47ffa17adf363b2f3166468b 566 Gene3D G3DSA:3.30.420.40 1 276 6.5E-43 T 28-03-2018 DDI_RS09240 ce34596d47ffa17adf363b2f3166468b 566 SUPERFAMILY SSF53067 7 287 2.18E-25 T 28-03-2018 DDI_RS09240 ce34596d47ffa17adf363b2f3166468b 566 Gene3D G3DSA:3.30.420.40 277 552 7.4E-51 T 28-03-2018 DDI_RS09240 ce34596d47ffa17adf363b2f3166468b 566 SUPERFAMILY SSF53067 288 551 5.18E-44 T 28-03-2018 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 Gene3D G3DSA:1.20.200.10 104 369 6.5E-73 T 28-03-2018 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 Gene3D G3DSA:1.10.40.30 370 443 1.3E-22 T 28-03-2018 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 442 2.4E-19 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 7.6E-22 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 7.6E-22 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 7.6E-22 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 7.6E-22 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 Gene3D G3DSA:1.10.275.10 4 103 6.6E-20 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 6.8E-10 T 28-03-2018 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 PRINTS PR00145 Argininosuccinate lyase family signature 100 122 6.8E-10 T 28-03-2018 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 6.8E-10 T 28-03-2018 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 6.8E-10 T 28-03-2018 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 SUPERFAMILY SSF48557 10 444 3.61E-118 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 Pfam PF00206 Lyase 17 293 5.8E-44 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 SMART SM00998 364 443 3.1E-31 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 15 443 4.0E-111 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS18760 2ddc4af23064d394d14dc333f8012b86 454 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDI_RS01100 fd11cec1e02eb3e5c2fad4750f67f93b 397 Gene3D G3DSA:3.40.50.1220 1 337 3.0E-4 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 SUPERFAMILY SSF46589 1 113 1.88E-28 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 429 40.878 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 SUPERFAMILY SSF55681 117 425 1.8E-97 T 28-03-2018 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 PRINTS PR00981 Seryl-tRNA synthetase signature 271 283 4.0E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 PRINTS PR00981 Seryl-tRNA synthetase signature 358 374 4.0E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 PRINTS PR00981 Seryl-tRNA synthetase signature 283 296 4.0E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 PRINTS PR00981 Seryl-tRNA synthetase signature 340 356 4.0E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 PRINTS PR00981 Seryl-tRNA synthetase signature 323 336 4.0E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 424 3.2E-176 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 2.8E-31 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 Gene3D G3DSA:1.10.287.40 2 105 7.9E-22 T 28-03-2018 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 407 3.0E-34 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 PIRSF PIRSF001529 1 431 7.4E-181 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDI_RS08120 e11915bc72a449e4c36f7cbdfb6dbe64 431 Gene3D G3DSA:3.30.930.10 106 431 2.1E-91 T 28-03-2018 DDI_RS10415 323309134cb3ecaa8302e9177472dbdc 400 SUPERFAMILY SSF55031 185 301 1.26E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS10415 323309134cb3ecaa8302e9177472dbdc 400 Pfam PF01546 Peptidase family M20/M25/M40 75 390 4.0E-33 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS10415 323309134cb3ecaa8302e9177472dbdc 400 PIRSF PIRSF005962 1 396 1.4E-119 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS10415 323309134cb3ecaa8302e9177472dbdc 400 SUPERFAMILY SSF53187 303 391 1.2E-82 T 28-03-2018 DDI_RS10415 323309134cb3ecaa8302e9177472dbdc 400 SUPERFAMILY SSF53187 5 199 1.2E-82 T 28-03-2018 DDI_RS10415 323309134cb3ecaa8302e9177472dbdc 400 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 381 5.4E-104 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS10415 323309134cb3ecaa8302e9177472dbdc 400 Gene3D G3DSA:3.40.630.10 2 251 3.6E-44 T 28-03-2018 DDI_RS10415 323309134cb3ecaa8302e9177472dbdc 400 Gene3D G3DSA:3.40.630.10 254 394 1.1E-20 T 28-03-2018 DDI_RS06745 871bfa476a03b674445c3ccaf6e4dad3 524 PIRSF PIRSF002741 23 523 2.6E-86 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS06745 871bfa476a03b674445c3ccaf6e4dad3 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 436 9.9E-80 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS06745 871bfa476a03b674445c3ccaf6e4dad3 524 SUPERFAMILY SSF53850 31 519 8.32E-108 T 28-03-2018 DDI_RS06745 871bfa476a03b674445c3ccaf6e4dad3 524 Gene3D G3DSA:3.40.190.10 183 280 3.2E-19 T 28-03-2018 DDI_RS06745 871bfa476a03b674445c3ccaf6e4dad3 524 Gene3D G3DSA:3.10.105.10 281 496 1.6E-45 T 28-03-2018 DDI_RS06745 871bfa476a03b674445c3ccaf6e4dad3 524 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 28 522 1.5E-176 T 28-03-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 DDI_RS06745 871bfa476a03b674445c3ccaf6e4dad3 524 Gene3D G3DSA:3.90.76.10 39 182 1.7E-26 T 28-03-2018 DDI_RS00535 9ecb79def159c16bd9b088c184af0af4 490 Gene3D G3DSA:3.30.420.40 4 234 2.9E-47 T 28-03-2018 DDI_RS00535 9ecb79def159c16bd9b088c184af0af4 490 SUPERFAMILY SSF53067 250 465 1.38E-33 T 28-03-2018 DDI_RS00535 9ecb79def159c16bd9b088c184af0af4 490 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 433 1.5E-25 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDI_RS00535 9ecb79def159c16bd9b088c184af0af4 490 SUPERFAMILY SSF53067 5 244 3.75E-46 T 28-03-2018 DDI_RS00535 9ecb79def159c16bd9b088c184af0af4 490 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 241 2.1E-34 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DDI_RS00535 9ecb79def159c16bd9b088c184af0af4 490 Gene3D G3DSA:3.30.420.40 235 489 2.2E-43 T 28-03-2018 DDI_RS00535 9ecb79def159c16bd9b088c184af0af4 490 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 459 1.4E-191 T 28-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 SUPERFAMILY SSF51905 2 270 4.37E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 Pfam PF00743 Flavin-binding monooxygenase-like 6 357 2.4E-49 T 28-03-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 SUPERFAMILY SSF51905 174 224 1.88E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 SUPERFAMILY SSF51905 267 378 1.88E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 300 327 1.4E-20 T 28-03-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 6 22 1.4E-20 T 28-03-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 187 202 1.4E-20 T 28-03-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 78 93 1.4E-20 T 28-03-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 160 174 1.4E-20 T 28-03-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 54 72 1.4E-20 T 28-03-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 PIRSF PIRSF000332 4 427 1.1E-52 T 28-03-2018 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 Gene3D G3DSA:3.50.50.60 277 432 1.1E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 Gene3D G3DSA:3.50.50.60 1 181 3.6E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12330 80d54189c2a1d4f61223003beb055494 434 Gene3D G3DSA:3.40.50.20 182 208 0.016 T 28-03-2018 DDI_RS02160 a8654a355bc0d251246c0399fae75073 89 SMART SM01387 8 88 7.4E-52 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS02160 a8654a355bc0d251246c0399fae75073 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS02160 a8654a355bc0d251246c0399fae75073 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.0E-39 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02160 a8654a355bc0d251246c0399fae75073 89 Gene3D G3DSA:1.10.287.10 2 89 4.1E-36 T 28-03-2018 DDI_RS02160 a8654a355bc0d251246c0399fae75073 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.264 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02160 a8654a355bc0d251246c0399fae75073 89 Pfam PF00312 Ribosomal protein S15 8 88 3.2E-37 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS02160 a8654a355bc0d251246c0399fae75073 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 8.0E-28 T 28-03-2018 DDI_RS02160 a8654a355bc0d251246c0399fae75073 89 SUPERFAMILY SSF47060 3 89 7.65E-35 T 28-03-2018 IPR009068 S15/NS1, RNA-binding DDI_RS10920 4e3ed27eaadccb42041b30546530a77a 867 Pfam PF11739 Dicarboxylate transport 659 859 7.5E-55 T 28-03-2018 IPR021730 Dicarboxylate transport DDI_RS21240 dc5c1a2ad2e3aad35f53f20799369b14 257 Pfam PF00696 Amino acid kinase family 4 234 2.3E-41 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS21240 dc5c1a2ad2e3aad35f53f20799369b14 257 Gene3D G3DSA:3.40.1160.10 2 257 2.2E-46 T 28-03-2018 DDI_RS21240 dc5c1a2ad2e3aad35f53f20799369b14 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 26.123 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS21240 dc5c1a2ad2e3aad35f53f20799369b14 257 PIRSF PIRSF000728 1 257 3.9E-72 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS21240 dc5c1a2ad2e3aad35f53f20799369b14 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 2.5E-73 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS21240 dc5c1a2ad2e3aad35f53f20799369b14 257 SUPERFAMILY SSF53633 2 256 2.75E-60 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS10085 af1701badeaa526d03a17d23cd911eb5 487 Gene3D G3DSA:3.30.565.10 336 486 2.2E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10085 af1701badeaa526d03a17d23cd911eb5 487 Pfam PF08918 PhoQ Sensor 9 187 8.8E-83 T 28-03-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 DDI_RS10085 af1701badeaa526d03a17d23cd911eb5 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 473 5.2E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10085 af1701badeaa526d03a17d23cd911eb5 487 SMART SM00387 375 481 1.5E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10085 af1701badeaa526d03a17d23cd911eb5 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 1.7E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS10085 af1701badeaa526d03a17d23cd911eb5 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 1.7E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS10085 af1701badeaa526d03a17d23cd911eb5 487 SUPERFAMILY SSF55874 337 474 8.77E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 Pfam PF00970 Oxidoreductase FAD-binding domain 38 104 3.3E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 261 327 2.3E-11 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 SUPERFAMILY SSF63380 11 105 2.01E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 PRINTS PR00406 Cytochrome B5 reductase signature 55 62 3.5E-6 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 PRINTS PR00406 Cytochrome B5 reductase signature 206 214 3.5E-6 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 PRINTS PR00406 Cytochrome B5 reductase signature 115 134 3.5E-6 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 Gene3D G3DSA:3.10.20.30 237 335 6.0E-23 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 Pfam PF00175 Oxidoreductase NAD-binding domain 116 220 1.5E-15 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 SUPERFAMILY SSF54292 228 334 7.87E-26 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 Gene3D G3DSA:3.40.50.80 106 236 3.7E-27 T 28-03-2018 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 286 294 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 Gene3D G3DSA:2.40.30.10 9 105 6.9E-17 T 28-03-2018 DDI_RS08040 9750ea02a0bf71d443f891cafde7991d 335 SUPERFAMILY SSF52343 111 241 5.11E-31 T 28-03-2018 DDI_RS16645 854dc1f181ca1d3a7a85df1690b9a6bf 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 5 30 8.4E-9 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DDI_RS16645 854dc1f181ca1d3a7a85df1690b9a6bf 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 41 59 8.4E-9 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DDI_RS16645 854dc1f181ca1d3a7a85df1690b9a6bf 147 Pfam PF00114 Pilin (bacterial filament) 35 136 2.1E-4 T 28-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 DDI_RS16645 854dc1f181ca1d3a7a85df1690b9a6bf 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 3.8E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS16645 854dc1f181ca1d3a7a85df1690b9a6bf 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 4.7E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS16645 854dc1f181ca1d3a7a85df1690b9a6bf 147 SUPERFAMILY SSF54523 6 140 5.23E-22 T 28-03-2018 DDI_RS16645 854dc1f181ca1d3a7a85df1690b9a6bf 147 Gene3D G3DSA:3.30.700.10 6 144 2.9E-25 T 28-03-2018 DDI_RS16645 854dc1f181ca1d3a7a85df1690b9a6bf 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 SUPERFAMILY SSF56784 3 190 4.68E-41 T 28-03-2018 IPR023214 HAD-like domain DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 184 1.4E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 83 184 8.7E-10 T 28-03-2018 IPR023214 HAD-like domain DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 Gene3D G3DSA:3.40.50.1000 79 195 1.9E-20 T 28-03-2018 IPR023214 HAD-like domain DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS19795 fc8be84f320759515f4d908fb00e14a2 203 Gene3D G3DSA:1.10.150.240 14 78 7.7E-19 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 PIRSF PIRSF001435 1 210 2.0E-50 T 28-03-2018 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.7E-21 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 SUPERFAMILY SSF48150 2 208 2.36E-73 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 Gene3D G3DSA:1.10.1670.10 117 210 6.6E-30 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 7.6E-88 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 Gene3D G3DSA:1.10.340.30 25 116 9.1E-24 T 28-03-2018 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 Pfam PF00633 Helix-hairpin-helix motif 99 127 2.3E-7 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.9E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 SMART SM00478 38 185 1.5E-54 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 SMART SM00525 186 206 6.7E-6 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DDI_RS09195 504e414ac48118df1ec42d6fba2fa428 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.974 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 Gene3D G3DSA:3.40.190.10 179 269 2.0E-21 T 28-03-2018 DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 SUPERFAMILY SSF53850 88 296 3.1E-35 T 28-03-2018 DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 Gene3D G3DSA:3.40.190.10 88 178 8.3E-16 T 28-03-2018 DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 Pfam PF03466 LysR substrate binding domain 87 294 3.3E-39 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 Gene3D G3DSA:1.10.10.10 1 83 5.4E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.9E-24 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02320 44dd5f4b5f92b6365f0d42be07d58359 297 SUPERFAMILY SSF46785 1 85 2.87E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 Pfam PF02938 GAD domain 307 406 2.9E-30 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 Gene3D G3DSA:2.40.50.140 1 110 2.6E-24 T 28-03-2018 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 2.2E-270 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 SUPERFAMILY SSF55681 420 583 1.34E-105 T 28-03-2018 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 SUPERFAMILY SSF55681 108 287 1.34E-105 T 28-03-2018 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.8E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.8E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.8E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.8E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 Gene3D G3DSA:3.30.930.10 131 586 2.2E-100 T 28-03-2018 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 SUPERFAMILY SSF55261 288 419 1.59E-47 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.3E-106 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 SUPERFAMILY SSF50249 1 105 2.48E-33 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.544 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DDI_RS08665 7598690e3ad52aacfd363fac6856add6 596 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.3E-15 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 Gene3D G3DSA:3.10.290.10 1 64 8.4E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 SUPERFAMILY SSF55120 69 236 1.42E-44 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 SUPERFAMILY SSF55174 5 99 4.42E-13 T 28-03-2018 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.5E-16 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 Gene3D G3DSA:3.30.70.580 65 150 7.4E-19 T 28-03-2018 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 232 2.2E-60 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 SMART SM00363 3 74 6.5E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 Gene3D G3DSA:3.30.70.1560 151 219 1.4E-21 T 28-03-2018 DDI_RS09150 8a9c9ab0fca181d308ed64b466edd446 296 Pfam PF01479 S4 domain 4 43 1.7E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 Gene3D G3DSA:3.40.1550.10 48 236 1.3E-38 T 28-03-2018 IPR028976 CheC-like domain DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.3E-30 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 1.3E-30 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 1.3E-30 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 PRINTS PR00955 Flagellar motor switch protein FliM signature 215 233 1.3E-30 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 255 323 4.4E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 Gene3D G3DSA:2.30.330.10 241 330 1.8E-15 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 323 2.6E-110 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 SUPERFAMILY SSF101801 252 325 4.71E-12 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 PIRSF PIRSF002888 2 332 2.8E-97 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 SUPERFAMILY SSF103039 51 233 1.75E-20 T 28-03-2018 IPR028976 CheC-like domain DDI_RS12025 d64094139e20702eb10eb522e4b24ef4 338 Pfam PF02154 Flagellar motor switch protein FliM 40 233 1.5E-75 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DDI_RS12220 3a8adf2fdd7b90cdddec40750cc2e9c7 426 SMART SM00495 379 422 1.2E-5 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DDI_RS12220 3a8adf2fdd7b90cdddec40750cc2e9c7 426 Gene3D G3DSA:2.10.10.20 365 426 9.3E-11 T 28-03-2018 DDI_RS12220 3a8adf2fdd7b90cdddec40750cc2e9c7 426 SUPERFAMILY SSF51445 45 331 3.36E-84 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS12220 3a8adf2fdd7b90cdddec40750cc2e9c7 426 SUPERFAMILY SSF51055 367 426 2.75E-13 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DDI_RS12220 3a8adf2fdd7b90cdddec40750cc2e9c7 426 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 169 178 - T 28-03-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 DDI_RS12220 3a8adf2fdd7b90cdddec40750cc2e9c7 426 Pfam PF14600 Cellulose-binding domain 366 426 5.5E-29 T 28-03-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS12220 3a8adf2fdd7b90cdddec40750cc2e9c7 426 Gene3D G3DSA:3.20.20.80 44 332 1.0E-46 T 28-03-2018 DDI_RS12220 3a8adf2fdd7b90cdddec40750cc2e9c7 426 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 63 302 7.9E-58 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 DDI_RS15920 f52634c696648165106b16dbde42a050 315 SUPERFAMILY SSF46785 3 85 1.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15920 f52634c696648165106b16dbde42a050 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS15920 f52634c696648165106b16dbde42a050 315 Gene3D G3DSA:3.40.190.10 184 267 7.0E-22 T 28-03-2018 DDI_RS15920 f52634c696648165106b16dbde42a050 315 Gene3D G3DSA:1.10.10.10 1 93 1.5E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15920 f52634c696648165106b16dbde42a050 315 Pfam PF03466 LysR substrate binding domain 93 293 4.3E-36 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS15920 f52634c696648165106b16dbde42a050 315 Gene3D G3DSA:3.40.190.10 94 183 4.5E-18 T 28-03-2018 DDI_RS15920 f52634c696648165106b16dbde42a050 315 SUPERFAMILY SSF53850 95 300 2.9E-36 T 28-03-2018 DDI_RS18870 c1fabc4e7ac0fb2dd5ab5572f6864a21 498 SUPERFAMILY SSF109604 307 495 6.91E-44 T 28-03-2018 DDI_RS18870 c1fabc4e7ac0fb2dd5ab5572f6864a21 498 Gene3D G3DSA:3.30.420.40 1 120 2.6E-43 T 28-03-2018 DDI_RS18870 c1fabc4e7ac0fb2dd5ab5572f6864a21 498 SUPERFAMILY SSF53067 132 300 2.16E-40 T 28-03-2018 DDI_RS18870 c1fabc4e7ac0fb2dd5ab5572f6864a21 498 SUPERFAMILY SSF53067 7 128 5.5E-39 T 28-03-2018 DDI_RS18870 c1fabc4e7ac0fb2dd5ab5572f6864a21 498 Pfam PF02541 Ppx/GppA phosphatase family 21 301 2.0E-98 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DDI_RS18870 c1fabc4e7ac0fb2dd5ab5572f6864a21 498 PIRSF PIRSF001267 1 496 3.3E-178 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 DDI_RS18870 c1fabc4e7ac0fb2dd5ab5572f6864a21 498 Gene3D G3DSA:3.30.420.150 121 299 1.8E-35 T 28-03-2018 DDI_RS18870 c1fabc4e7ac0fb2dd5ab5572f6864a21 498 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 55.048 T 28-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 DDI_RS21090 15618f7d394c04b89a63875065098104 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.439 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS21090 15618f7d394c04b89a63875065098104 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.4E-28 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS21090 15618f7d394c04b89a63875065098104 78 SUPERFAMILY SSF143800 1 77 6.47E-30 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21090 15618f7d394c04b89a63875065098104 78 Gene3D G3DSA:2.30.170.40 2 75 2.7E-28 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21090 15618f7d394c04b89a63875065098104 78 Pfam PF00830 Ribosomal L28 family 3 62 2.0E-25 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS06965 f443232e3edcaf3f01c49d965434e37a 69 Gene3D G3DSA:3.30.60.20 10 68 5.1E-4 T 28-03-2018 DDI_RS06965 f443232e3edcaf3f01c49d965434e37a 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 65 1.6E-24 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type DDI_RS06965 f443232e3edcaf3f01c49d965434e37a 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 31 66 3.6E-13 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DDI_RS06965 f443232e3edcaf3f01c49d965434e37a 69 SUPERFAMILY SSF57716 35 68 8.84E-8 T 28-03-2018 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 Gene3D G3DSA:3.20.20.70 1 329 4.1E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 SMART SM00729 14 220 8.4E-6 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 Pfam PF04055 Radical SAM superfamily 19 181 4.0E-29 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 SUPERFAMILY SSF102114 5 278 2.62E-69 T 28-03-2018 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 8.0E-105 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 8.4E-6 T 28-03-2018 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 37.381 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 DDI_RS07170 83bb0e072e5fb11fa1b24665ae023e10 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 187 312 6.5E-38 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 DDI_RS09225 93e727ca820d881d6ebe240719dc3b49 193 PIRSF PIRSF006102 1 193 4.4E-58 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 DDI_RS09225 93e727ca820d881d6ebe240719dc3b49 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 7.2E-58 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 DDI_RS09225 93e727ca820d881d6ebe240719dc3b49 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.016 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 DDI_RS09225 93e727ca820d881d6ebe240719dc3b49 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 9.1E-88 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 788 4.7E-58 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 Gene3D G3DSA:3.50.30.10 361 480 9.1E-36 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 Gene3D G3DSA:3.30.470.20 199 360 1.2E-44 T 28-03-2018 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 790 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 347 6.2E-119 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 Gene3D G3DSA:3.30.1490.20 7 198 3.5E-54 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 SUPERFAMILY SSF52009 351 470 6.28E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 SUPERFAMILY SSF56059 8 386 2.12E-108 T 28-03-2018 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 Gene3D G3DSA:3.20.20.60 481 792 1.0E-101 T 28-03-2018 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 2.6E-26 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 PIRSF PIRSF000854 6 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 SUPERFAMILY SSF51621 467 790 5.76E-94 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS11440 cfba0e905cd93dfa77ddcd6f7afcf49a 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 65.58 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 SUPERFAMILY SSF53187 2 180 8.29E-58 T 28-03-2018 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 SUPERFAMILY SSF53187 305 381 8.29E-58 T 28-03-2018 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 1.8E-155 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 SUPERFAMILY SSF55031 181 293 8.37E-21 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 Gene3D G3DSA:3.40.630.10 1 184 4.4E-28 T 28-03-2018 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 1.5E-31 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 Gene3D G3DSA:3.30.70.360 185 295 4.7E-21 T 28-03-2018 DDI_RS21230 b79fcb875c2eda72f6bec0b575db04bf 383 Pfam PF07687 Peptidase dimerisation domain 178 288 9.2E-25 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS10615 9f7d5ad2f7df0d26475ad2386b0cc5da 243 Gene3D G3DSA:1.10.1710.10 1 121 1.6E-40 T 28-03-2018 IPR016103 ProQ/FinO domain DDI_RS10615 9f7d5ad2f7df0d26475ad2386b0cc5da 243 SMART SM00945 5 119 3.8E-62 T 28-03-2018 IPR016103 ProQ/FinO domain DDI_RS10615 9f7d5ad2f7df0d26475ad2386b0cc5da 243 SUPERFAMILY SSF48657 5 119 1.7E-39 T 28-03-2018 IPR016103 ProQ/FinO domain DDI_RS10615 9f7d5ad2f7df0d26475ad2386b0cc5da 243 Pfam PF17516 ProQ C-terminal domain 193 243 9.4E-25 T 28-03-2018 IPR035236 RNA chaperone ProQ, C-terminal DDI_RS10615 9f7d5ad2f7df0d26475ad2386b0cc5da 243 Pfam PF04352 ProQ/FINO family 8 115 4.2E-43 T 28-03-2018 IPR016103 ProQ/FinO domain DDI_RS10615 9f7d5ad2f7df0d26475ad2386b0cc5da 243 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 243 30.598 T 28-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 DDI_RS03510 fe6baaece0d4d56210f16034873c00f0 90 Gene3D G3DSA:1.10.3880.10 2 89 1.6E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDI_RS03510 fe6baaece0d4d56210f16034873c00f0 90 PIRSF PIRSF029827 1 90 5.0E-44 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDI_RS03510 fe6baaece0d4d56210f16034873c00f0 90 SUPERFAMILY SSF111148 1 89 6.28E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDI_RS03510 fe6baaece0d4d56210f16034873c00f0 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.733 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDI_RS03510 fe6baaece0d4d56210f16034873c00f0 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-35 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDI_RS03510 fe6baaece0d4d56210f16034873c00f0 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 2.2E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 SMART SM00778 32 68 2.3E-18 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 SUPERFAMILY SSF57783 31 95 3.06E-8 T 28-03-2018 DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 Pfam PF08273 Zinc-binding domain of primase-helicase 32 68 1.3E-17 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 SMART SM00885 336 470 2.8E-12 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 Gene3D G3DSA:3.40.1360.10 197 314 2.0E-12 T 28-03-2018 DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 Gene3D G3DSA:3.40.50.300 448 648 2.9E-13 T 28-03-2018 DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 SUPERFAMILY SSF52540 479 644 5.2E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 Pfam PF13362 Toprim domain 211 301 9.8E-11 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 SUPERFAMILY SSF46785 671 769 6.8E-38 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 Gene3D G3DSA:1.10.10.10 672 768 5.3E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 Pfam PF03288 Poxvirus D5 protein-like 670 768 3.5E-18 T 28-03-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 Pfam PF08706 D5 N terminal like 389 467 4.6E-7 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal DDI_RS02865 9dc69a1fa1e0432d37ee823db2918609 774 Gene3D G3DSA:3.90.580.10 8 97 3.0E-10 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 879 1.3E-294 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 28-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 SUPERFAMILY SSF51621 6 879 0.0 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.7E-69 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.7E-69 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 1.7E-69 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 1.7E-69 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 1.7E-69 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.7E-69 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 1.7E-69 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 Gene3D G3DSA:1.20.1440.90 274 385 2.3E-25 T 28-03-2018 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 28-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 879 18.333 T 28-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDI_RS21225 9e78ff582a7b41598ec23c7ad8b84ebf 879 Gene3D G3DSA:3.20.20.60 386 594 4.2E-5 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 1.6E-53 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 Gene3D G3DSA:3.40.50.880 1 192 6.3E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 SUPERFAMILY SSF52317 3 191 1.09E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.4E-36 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.4E-36 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.4E-36 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.4E-36 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.4E-36 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.4E-36 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 3.2E-6 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 3.2E-6 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 4.8E-45 T 28-03-2018 IPR017926 Glutamine amidotransferase DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.7E-14 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.7E-14 T 28-03-2018 DDI_RS09130 5f9fb666e60e5b2a08eec09232f470c4 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.7E-14 T 28-03-2018 DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 SUPERFAMILY SSF55874 294 438 3.51E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 SMART SM00387 334 439 1.6E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 2.5E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 2.5E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 2.5E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 2.5E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 438 5.4E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 Gene3D G3DSA:1.10.287.130 222 295 1.5E-5 T 28-03-2018 DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 Gene3D G3DSA:3.30.565.10 298 439 4.5E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 SUPERFAMILY SSF47384 225 295 1.84E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 SUPERFAMILY SSF55785 110 174 4.19E-7 T 28-03-2018 IPR000014 PAS domain DDI_RS20760 4e7aa582614ac2ae16fc87a329f0b5f5 439 Gene3D G3DSA:3.30.450.20 102 221 1.0E-7 T 28-03-2018 DDI_RS02925 48ddb4b2489b865da672bf62630fb6a0 114 Pfam PF04355 SmpA / OmlA family 36 105 1.6E-27 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 DDI_RS02925 48ddb4b2489b865da672bf62630fb6a0 114 Gene3D G3DSA:3.30.1450.10 38 110 6.9E-11 T 28-03-2018 DDI_RS02925 48ddb4b2489b865da672bf62630fb6a0 114 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 5 113 31.609 T 28-03-2018 IPR026592 Outer membrane protein assembly factor BamE DDI_RS17120 080ef5491daa3c10e0b4eb4f726bcd88 110 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 11 101 2.0E-30 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 DDI_RS17120 080ef5491daa3c10e0b4eb4f726bcd88 110 TIGRFAM TIGR01321 TrpR: trp operon repressor 12 104 4.5E-34 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 DDI_RS17120 080ef5491daa3c10e0b4eb4f726bcd88 110 PIRSF PIRSF003196 10 109 2.7E-38 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 DDI_RS17120 080ef5491daa3c10e0b4eb4f726bcd88 110 Gene3D G3DSA:1.10.1270.10 8 108 6.0E-22 T 28-03-2018 DDI_RS17120 080ef5491daa3c10e0b4eb4f726bcd88 110 SUPERFAMILY SSF48295 6 104 4.18E-29 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DDI_RS17120 080ef5491daa3c10e0b4eb4f726bcd88 110 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 23.416 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 DDI_RS17120 080ef5491daa3c10e0b4eb4f726bcd88 110 Pfam PF01371 Trp repressor protein 17 103 2.8E-28 T 28-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 DDI_RS01020 82079748b7022619cea2e9aa35a0ee6d 220 SUPERFAMILY SSF55676 36 218 3.66E-36 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01020 82079748b7022619cea2e9aa35a0ee6d 220 Pfam PF01338 Bacillus thuringiensis toxin 41 218 4.5E-41 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01020 82079748b7022619cea2e9aa35a0ee6d 220 ProDom PD009844 CYTOLYTIC TOXIN DELTA-ENDOTOXIN SPORULATION PLASMID TYPE-1AA TOCIN 3D-STRUCTURE CRYET29 TYPE-1BA 53 218 2.0E-18 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01020 82079748b7022619cea2e9aa35a0ee6d 220 Gene3D G3DSA:3.40.198.10 40 215 4.2E-40 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS12470 3b6bfe5da891b981aebc30de1184551d 181 Gene3D G3DSA:3.40.50.360 2 181 1.0E-35 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS12470 3b6bfe5da891b981aebc30de1184551d 181 SUPERFAMILY SSF52218 5 173 1.49E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS12470 3b6bfe5da891b981aebc30de1184551d 181 Pfam PF03358 NADPH-dependent FMN reductase 5 146 1.1E-31 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 748 7.7E-160 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 PIRSF PIRSF000382 2 756 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 Gene3D G3DSA:3.20.20.210 386 754 1.9E-126 T 28-03-2018 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.327 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 1.2E-126 T 28-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 SUPERFAMILY SSF51726 391 752 2.75E-118 T 28-03-2018 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 SUPERFAMILY SSF51726 5 387 1.44E-113 T 28-03-2018 DDI_RS21205 71559c1a0aab7feced5a766f3750fe2d 756 Gene3D G3DSA:3.20.20.210 3 385 2.8E-141 T 28-03-2018 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 SUPERFAMILY SSF52210 240 385 7.59E-52 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 Gene3D G3DSA:3.30.470.20 96 239 5.3E-51 T 28-03-2018 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 Pfam PF00549 CoA-ligase 262 382 1.3E-23 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 SUPERFAMILY SSF56059 1 238 3.54E-81 T 28-03-2018 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.8E-180 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 Pfam PF08442 ATP-grasp domain 2 203 3.8E-82 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 PIRSF PIRSF001554 1 388 1.5E-152 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 Gene3D G3DSA:3.40.50.261 240 385 1.1E-40 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 Gene3D G3DSA:3.30.1490.20 21 95 6.0E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS05125 b7ce0c68de680e261c87b93a5c113e31 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.075 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 Gene3D G3DSA:3.40.50.300 481 724 2.9E-66 T 28-03-2018 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 Gene3D G3DSA:1.20.1560.10 163 480 7.9E-34 T 28-03-2018 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 SUPERFAMILY SSF90123 166 481 1.44E-47 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 Gene3D G3DSA:3.90.70.10 26 151 3.5E-12 T 28-03-2018 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 SUPERFAMILY SSF52540 486 713 3.27E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 Pfam PF00005 ABC transporter 512 659 4.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 Pfam PF00664 ABC transporter transmembrane region 182 441 4.7E-22 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 PRINTS PR01896 ABC transporter family B2 signature 90 104 6.1E-5 T 28-03-2018 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 PRINTS PR01896 ABC transporter family B2 signature 540 554 6.1E-5 T 28-03-2018 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 PRINTS PR01896 ABC transporter family B2 signature 671 689 6.1E-5 T 28-03-2018 DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 29 723 6.0E-264 T 28-03-2018 IPR017750 ATPase, type I secretion system DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 SMART SM00382 519 705 6.8E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14225 e55e16015e4c7806db46fd4a0806b87c 728 ProSitePatterns PS00211 ABC transporters family signature. 631 645 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2213 2323 1.2E-7 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3559 3680 2.6E-7 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1075 1164 2.5E-8 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:1.10.1200.10 4948 5045 3.1E-10 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 4301 4329 6.94E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 3841 3918 6.94E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF08242 Methyltransferase domain 196 299 3.3E-13 T 28-03-2018 IPR013217 Methyltransferase type 12 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 3166 3196 9.68E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 3036 3111 9.68E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2732 2917 4.0E-37 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF14765 Polyketide synthase dehydratase 1343 1604 3.0E-16 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF53901 4315 4680 1.48E-68 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.50.720 2728 2963 1.4E-36 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM01294 1657 1723 8.9E-6 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM01294 440 506 2.8E-7 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM01294 543 609 1.1E-7 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM01294 3847 3913 1.4E-7 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM01294 3040 3106 1.0E-5 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF08659 KR domain 2732 2916 5.1E-44 T 28-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00975 Thioesterase domain 3997 4103 2.5E-25 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00825 Beta-ketoacyl synthase 3184 3609 1.5E-136 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00825 Beta-ketoacyl synthase 691 1124 4.9E-136 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00825 Beta-ketoacyl synthase 1832 2271 3.2E-181 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00825 Beta-ketoacyl synthase 4319 4737 7.3E-112 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.50.150 73 368 2.0E-20 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.50.1820 3989 4291 8.2E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2091 2206 8.5E-40 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3438 3555 1.2E-32 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 953 1070 7.3E-37 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4562 4683 1.4E-27 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF53901 3180 3545 3.27E-81 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.47.10 3445 3607 4.3E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.47.10 4568 4735 1.4E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.47.10 2098 2269 8.7E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.47.10 960 1122 3.0E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF53474 3997 4280 7.94E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:1.10.1200.10 402 513 2.0E-14 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.47.10 3178 3442 8.3E-73 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.47.10 1822 2095 1.1E-73 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.47.10 687 957 8.4E-67 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 4466 4482 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4993 5008 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00668 Condensation domain 5147 5586 6.0E-36 T 28-03-2018 IPR001242 Condensation domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 858 874 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 1814 1844 2.49E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 1653 1728 2.49E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.30.559.10 5140 5337 5.7E-17 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF53901 687 1063 7.95E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:1.10.1200.10 3840 3957 2.6E-11 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:1.10.1200.10 3033 3177 4.4E-14 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:1.10.1200.10 1649 1804 3.9E-14 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:1.10.1200.10 534 686 3.3E-13 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF52777 5146 5343 1.11E-22 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00823 Phosphopantetheine attachment site 4967 5024 0.0012 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00823 Phosphopantetheine attachment site 3039 3110 1.7E-11 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00823 Phosphopantetheine attachment site 439 510 3.4E-12 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00823 Phosphopantetheine attachment site 3846 3917 0.0026 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00823 Phosphopantetheine attachment site 542 613 2.4E-8 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SMART SM00823 Phosphopantetheine attachment site 1655 1727 5.6E-8 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF51735 2730 2962 1.18E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3343 3359 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 435 510 7.33E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF53901 1827 2198 3.12E-87 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00550 Phosphopantetheine attachment site 4968 5030 2.8E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00550 Phosphopantetheine attachment site 3041 3105 1.1E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00550 Phosphopantetheine attachment site 441 506 8.7E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00550 Phosphopantetheine attachment site 3847 3913 1.0E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00550 Phosphopantetheine attachment site 1659 1723 2.1E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00550 Phosphopantetheine attachment site 554 609 1.2E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 3348 3366 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1830 2083 1.4E-81 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4317 4553 1.5E-64 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 690 945 7.0E-64 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3182 3430 2.0E-74 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF53335 111 356 3.57E-24 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF52777 5333 5585 3.11E-23 T 28-03-2018 DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 537 614 1.96E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 SUPERFAMILY SSF47336 4965 5033 2.62E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12290 ad46ac1660b5955790cc9e53816efe4a 5608 Gene3D G3DSA:3.40.47.10 4309 4564 1.3E-64 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 SMART SM00342 243 326 6.9E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 Pfam PF12833 Helix-turn-helix domain 249 327 9.3E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 SUPERFAMILY SSF46689 279 327 1.25E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 Gene3D G3DSA:1.10.10.60 282 340 3.8E-13 T 28-03-2018 DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 SUPERFAMILY SSF52317 1 207 2.32E-33 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 Pfam PF01965 DJ-1/PfpI family 41 189 1.8E-10 T 28-03-2018 IPR002818 DJ-1/PfpI DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 Gene3D G3DSA:3.40.50.880 1 238 2.3E-37 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS02825 0da3d7559e32d18c5f60656900c499e0 344 Gene3D G3DSA:1.10.10.60 239 281 3.1E-9 T 28-03-2018 DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 Gene3D G3DSA:3.40.50.200 80 387 5.2E-43 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 Gene3D G3DSA:2.40.128.130 742 1056 1.9E-40 T 28-03-2018 DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 329 339 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 Pfam PF12951 Passenger-associated-transport-repeat 529 558 9.9E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 SUPERFAMILY SSF103515 752 1056 3.27E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 SUPERFAMILY SSF52743 83 371 2.36E-40 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 Gene3D G3DSA:3.40.50.200 412 479 0.0022 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 Pfam PF03797 Autotransporter beta-domain 787 1036 5.9E-41 T 28-03-2018 IPR005546 Autotransporter beta-domain DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 SUPERFAMILY SSF51126 291 672 9.42E-7 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 Pfam PF00082 Subtilase family 121 373 4.6E-26 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 SMART SM00869 783 1046 3.0E-27 T 28-03-2018 IPR005546 Autotransporter beta-domain DDI_RS03535 dc64f69e7e80c5b53683e653686a8d76 1056 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 528 559 2.3E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat DDI_RS00810 a6f6fb8ec1c7fb1a76ce79ce3fc86248 405 Pfam PF13286 Phosphohydrolase-associated domain 316 393 1.2E-12 T 28-03-2018 IPR026875 Phosphohydrolase-associated domain DDI_RS00810 a6f6fb8ec1c7fb1a76ce79ce3fc86248 405 Gene3D G3DSA:1.10.3210.10 27 396 1.0E-70 T 28-03-2018 DDI_RS00810 a6f6fb8ec1c7fb1a76ce79ce3fc86248 405 SMART SM00471 68 224 1.7E-11 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS00810 a6f6fb8ec1c7fb1a76ce79ce3fc86248 405 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 35 396 1.9E-99 T 28-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DDI_RS00810 a6f6fb8ec1c7fb1a76ce79ce3fc86248 405 Pfam PF01966 HD domain 72 214 2.7E-15 T 28-03-2018 IPR006674 HD domain DDI_RS00810 a6f6fb8ec1c7fb1a76ce79ce3fc86248 405 SUPERFAMILY SSF109604 34 395 3.14E-62 T 28-03-2018 DDI_RS16640 8593c7a9c1902f65fdfd203676952a1f 296 SUPERFAMILY SSF51690 130 295 1.26E-58 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DDI_RS16640 8593c7a9c1902f65fdfd203676952a1f 296 PIRSF PIRSF006250 17 296 8.8E-103 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 DDI_RS16640 8593c7a9c1902f65fdfd203676952a1f 296 Gene3D G3DSA:3.90.1170.20 7 155 5.4E-41 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 DDI_RS16640 8593c7a9c1902f65fdfd203676952a1f 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 128 3.5E-23 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 DDI_RS16640 8593c7a9c1902f65fdfd203676952a1f 296 SUPERFAMILY SSF54675 14 129 5.18E-30 T 28-03-2018 DDI_RS16640 8593c7a9c1902f65fdfd203676952a1f 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 295 9.0E-97 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 DDI_RS16640 8593c7a9c1902f65fdfd203676952a1f 296 Gene3D G3DSA:3.20.20.70 156 285 4.4E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS16640 8593c7a9c1902f65fdfd203676952a1f 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 294 5.9E-60 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DDI_RS12795 192bdeceb7cd60673106ed8384acd6a8 257 Pfam PF00005 ABC transporter 21 181 2.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS12795 192bdeceb7cd60673106ed8384acd6a8 257 SMART SM00382 30 229 1.3E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS12795 192bdeceb7cd60673106ed8384acd6a8 257 PIRSF PIRSF039085 2 257 1.7E-117 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS12795 192bdeceb7cd60673106ed8384acd6a8 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS12795 192bdeceb7cd60673106ed8384acd6a8 257 SUPERFAMILY SSF52540 8 251 9.44E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS12795 192bdeceb7cd60673106ed8384acd6a8 257 Gene3D G3DSA:3.40.50.300 1 255 5.5E-70 T 28-03-2018 DDI_RS15275 268c88edd31bc95036e973f525740495 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 290 1.7E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS15275 268c88edd31bc95036e973f525740495 391 SUPERFAMILY SSF111369 57 117 3.01E-7 T 28-03-2018 DDI_RS15275 268c88edd31bc95036e973f525740495 391 SUPERFAMILY SSF111369 146 185 3.01E-7 T 28-03-2018 DDI_RS15275 268c88edd31bc95036e973f525740495 391 Pfam PF00529 HlyD membrane-fusion protein of T1SS 62 347 3.9E-16 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS15275 268c88edd31bc95036e973f525740495 391 Gene3D G3DSA:3.90.1170.30 35 118 1.0E-4 T 28-03-2018 DDI_RS15275 268c88edd31bc95036e973f525740495 391 SUPERFAMILY SSF111369 167 269 5.49E-11 T 28-03-2018 DDI_RS15275 268c88edd31bc95036e973f525740495 391 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 21 346 2.2E-132 T 28-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 DDI_RS15275 268c88edd31bc95036e973f525740495 391 Gene3D G3DSA:2.40.50.100 210 363 2.1E-5 T 28-03-2018 DDI_RS15275 268c88edd31bc95036e973f525740495 391 Gene3D G3DSA:1.10.287.470 125 181 3.1E-7 T 28-03-2018 DDI_RS02150 202ada5d0941ae3a9dcedee55ee78848 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 1.0E-44 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 DDI_RS02150 202ada5d0941ae3a9dcedee55ee78848 133 SUPERFAMILY SSF89919 2 106 1.57E-34 T 28-03-2018 IPR023799 Ribosome-binding factor A domain DDI_RS02150 202ada5d0941ae3a9dcedee55ee78848 133 Gene3D G3DSA:3.30.300.20 5 119 6.4E-35 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta DDI_RS02150 202ada5d0941ae3a9dcedee55ee78848 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 28-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 DDI_RS02150 202ada5d0941ae3a9dcedee55ee78848 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 119 22.452 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 DDI_RS02150 202ada5d0941ae3a9dcedee55ee78848 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 117 1.5E-43 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 DDI_RS02150 202ada5d0941ae3a9dcedee55ee78848 133 Pfam PF02033 Ribosome-binding factor A 7 111 1.8E-32 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 DDI_RS13495 b1ebe1670ce19c5b2ef869909f909eb3 146 Gene3D G3DSA:1.10.260.40 4 72 6.6E-10 T 28-03-2018 DDI_RS13495 b1ebe1670ce19c5b2ef869909f909eb3 146 SUPERFAMILY SSF47413 5 66 2.45E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS13495 b1ebe1670ce19c5b2ef869909f909eb3 146 SMART SM00530 18 72 3.5E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS13495 b1ebe1670ce19c5b2ef869909f909eb3 146 Pfam PF01381 Helix-turn-helix 19 66 1.2E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS10190 d6208945b732d62ae13af75a16f1f842 301 SUPERFAMILY SSF57783 1 95 8.16E-25 T 28-03-2018 DDI_RS10190 d6208945b732d62ae13af75a16f1f842 301 Pfam PF01807 CHC2 zinc finger 7 94 2.2E-21 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS10190 d6208945b732d62ae13af75a16f1f842 301 SMART SM00400 37 91 2.5E-16 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS10190 d6208945b732d62ae13af75a16f1f842 301 SUPERFAMILY SSF56349 88 262 1.41E-44 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS10190 d6208945b732d62ae13af75a16f1f842 301 Gene3D G3DSA:3.90.580.10 1 88 7.9E-25 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS10190 d6208945b732d62ae13af75a16f1f842 301 Pfam PF00589 Phage integrase family 94 249 6.3E-30 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS10190 d6208945b732d62ae13af75a16f1f842 301 Gene3D G3DSA:1.10.443.10 89 268 5.3E-35 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS16950 5176ee9caff49fd8d9eb95b5987573b8 280 Gene3D G3DSA:3.60.21.10 1 275 4.7E-46 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS16950 5176ee9caff49fd8d9eb95b5987573b8 280 PIRSF PIRSF000903 1 274 1.1E-120 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DDI_RS16950 5176ee9caff49fd8d9eb95b5987573b8 280 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.043 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DDI_RS16950 5176ee9caff49fd8d9eb95b5987573b8 280 Pfam PF00149 Calcineurin-like phosphoesterase 4 127 4.2E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDI_RS16950 5176ee9caff49fd8d9eb95b5987573b8 280 SUPERFAMILY SSF56300 1 261 3.8E-57 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS16950 5176ee9caff49fd8d9eb95b5987573b8 280 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 269 1.9E-149 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 Gene3D G3DSA:3.30.930.10 2 252 2.7E-117 T 28-03-2018 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 SUPERFAMILY SSF55681 4 255 3.73E-108 T 28-03-2018 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 SUPERFAMILY SSF50447 455 552 9.62E-20 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 Gene3D G3DSA:2.40.30.10 439 501 0.084 T 28-03-2018 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 Pfam PF02272 DHHA1 domain 733 871 1.1E-29 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 Gene3D G3DSA:3.30.980.10 553 713 5.6E-47 T 28-03-2018 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 2.4E-18 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 SMART SM00863 653 696 6.2E-22 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 205.223 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 SUPERFAMILY SSF55186 552 711 3.79E-52 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 Pfam PF01411 tRNA synthetases class II (A) 7 554 9.1E-232 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 SUPERFAMILY SSF101353 256 464 1.15E-58 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDI_RS14815 13db4c2f7dbbe8a863258f8b8e1d1492 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 Gene3D G3DSA:3.40.50.300 1 172 7.0E-28 T 28-03-2018 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 Pfam PF01202 Shikimate kinase 11 168 1.1E-44 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 PRINTS PR01100 Shikimate kinase family signature 57 65 5.2E-25 T 28-03-2018 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 PRINTS PR01100 Shikimate kinase family signature 95 112 5.2E-25 T 28-03-2018 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 PRINTS PR01100 Shikimate kinase family signature 74 83 5.2E-25 T 28-03-2018 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 PRINTS PR01100 Shikimate kinase family signature 29 42 5.2E-25 T 28-03-2018 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 PRINTS PR01100 Shikimate kinase family signature 5 20 5.2E-25 T 28-03-2018 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 SUPERFAMILY SSF52540 4 169 4.05E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.784 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDI_RS04040 aea4cbc3566032bb28481d94a92bcecb 173 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 44.213 T 28-03-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 SUPERFAMILY SSF46785 2 103 9.53E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 Gene3D G3DSA:1.10.10.10 1 107 5.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 SUPERFAMILY SSF50331 171 259 2.84E-15 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 6.0E-25 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 2.0E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 Gene3D G3DSA:2.40.50.100 108 183 1.4E-17 T 28-03-2018 DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 Gene3D G3DSA:2.40.50.100 184 253 2.7E-15 T 28-03-2018 DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 Pfam PF03459 TOBE domain 124 187 1.5E-13 T 28-03-2018 IPR005116 Transport-associated OB, type 1 DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 Pfam PF03459 TOBE domain 199 259 1.0E-12 T 28-03-2018 IPR005116 Transport-associated OB, type 1 DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 SUPERFAMILY SSF50331 122 191 1.17E-17 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 109 7.2E-38 T 28-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal DDI_RS05265 2a04efdd6ef3609939a9516ffce23736 263 PIRSF PIRSF005763 1 263 5.5E-95 T 28-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 DDI_RS01125 fecfa3424cb098b616e058dbabe062db 268 Gene3D G3DSA:1.10.10.10 8 84 5.7E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01125 fecfa3424cb098b616e058dbabe062db 268 SMART SM00346 14 104 2.5E-30 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS01125 fecfa3424cb098b616e058dbabe062db 268 SUPERFAMILY SSF55781 82 262 1.83E-39 T 28-03-2018 IPR029016 GAF domain-like DDI_RS01125 fecfa3424cb098b616e058dbabe062db 268 Gene3D G3DSA:3.30.450.40 85 267 1.8E-42 T 28-03-2018 IPR029016 GAF domain-like DDI_RS01125 fecfa3424cb098b616e058dbabe062db 268 SUPERFAMILY SSF46785 15 85 4.26E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01125 fecfa3424cb098b616e058dbabe062db 268 Pfam PF09339 IclR helix-turn-helix domain 16 64 5.4E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS01125 fecfa3424cb098b616e058dbabe062db 268 Pfam PF01614 Bacterial transcriptional regulator 134 259 4.1E-32 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal DDI_RS06400 ac6f996241f6dc6b1671affe85ae74a7 365 SUPERFAMILY SSF53850 40 284 2.28E-36 T 28-03-2018 DDI_RS06400 ac6f996241f6dc6b1671affe85ae74a7 365 Pfam PF09084 NMT1/THI5 like 76 265 2.9E-17 T 28-03-2018 IPR015168 SsuA/THI5-like DDI_RS06400 ac6f996241f6dc6b1671affe85ae74a7 365 Gene3D G3DSA:3.40.190.10 39 161 1.6E-8 T 28-03-2018 DDI_RS06400 ac6f996241f6dc6b1671affe85ae74a7 365 Gene3D G3DSA:3.40.190.10 162 346 1.1E-27 T 28-03-2018 DDI_RS16415 0cd8400a0252ace502a7fc5793b75502 139 Gene3D G3DSA:3.10.450.40 1 134 5.0E-42 T 28-03-2018 DDI_RS16415 0cd8400a0252ace502a7fc5793b75502 139 SUPERFAMILY SSF160719 25 133 2.09E-32 T 28-03-2018 DDI_RS16415 0cd8400a0252ace502a7fc5793b75502 139 Pfam PF04965 Gene 25-like lysozyme 30 119 1.7E-26 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 Pfam PF00702 haloacid dehalogenase-like hydrolase 488 702 2.2E-36 T 28-03-2018 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 SUPERFAMILY SSF81665 389 475 7.85E-15 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 SUPERFAMILY SSF81665 238 291 7.85E-15 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 SUPERFAMILY SSF55008 100 164 1.83E-9 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 Pfam PF00122 E1-E2 ATPase 288 469 4.8E-53 T 28-03-2018 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 491 497 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 Gene3D G3DSA:1.20.1110.10 186 506 1.1E-35 T 28-03-2018 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 PRINTS PR00941 Cadmium-transporting ATPase signature 272 292 4.4E-9 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 PRINTS PR00941 Cadmium-transporting ATPase signature 373 387 4.4E-9 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 PRINTS PR00941 Cadmium-transporting ATPase signature 354 370 4.4E-9 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 Gene3D G3DSA:3.40.50.1000 616 755 1.5E-35 T 28-03-2018 IPR023214 HAD-like domain DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 SUPERFAMILY SSF56784 488 507 7.15E-50 T 28-03-2018 IPR023214 HAD-like domain DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 SUPERFAMILY SSF56784 546 788 7.15E-50 T 28-03-2018 IPR023214 HAD-like domain DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 SUPERFAMILY SSF81653 293 388 2.75E-24 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 260 767 5.2E-74 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 Gene3D G3DSA:3.30.70.100 88 172 1.9E-7 T 28-03-2018 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 237 791 1.0E-174 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 Gene3D G3DSA:3.40.1110.10 507 615 9.9E-26 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 489 503 8.1E-23 T 28-03-2018 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 712 724 8.1E-23 T 28-03-2018 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 707 8.1E-23 T 28-03-2018 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 338 352 8.1E-23 T 28-03-2018 DDI_RS01420 5967c44fa1c7bd4f7d3763b4d07127fc 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 646 8.1E-23 T 28-03-2018 DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 PIRSF PIRSF019401 56 179 2.1E-32 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 PIRSF PIRSF019401 1 66 5.0E-19 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 42.53 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 Gene3D G3DSA:1.20.1380.10 73 175 1.9E-41 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 Pfam PF17206 SeqA protein N-terminal domain 1 35 6.7E-25 T 28-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 Gene3D G3DSA:1.10.1220.10 1 37 2.2E-26 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 Pfam PF03925 SeqA protein C-terminal domain 69 177 1.7E-47 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 SUPERFAMILY SSF82808 64 179 2.62E-47 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 DDI_RS05010 b500adec24d966d80e01d7fcea39a39b 179 SUPERFAMILY SSF47598 1 35 1.89E-14 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS21020 53ec392b9ee21c668e4d4b2d34e6c35c 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 64 4.2E-13 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS21020 53ec392b9ee21c668e4d4b2d34e6c35c 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 298 4.4E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS21020 53ec392b9ee21c668e4d4b2d34e6c35c 299 SUPERFAMILY SSF161098 91 283 1.83E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS21020 53ec392b9ee21c668e4d4b2d34e6c35c 299 Gene3D G3DSA:1.10.3720.10 19 287 6.9E-42 T 28-03-2018 DDI_RS16450 8e61649cbad723c47ca61b146d9dfbee 332 Gene3D G3DSA:3.40.50.300 207 279 1.9E-7 T 28-03-2018 DDI_RS16450 8e61649cbad723c47ca61b146d9dfbee 332 SUPERFAMILY SSF52540 1 275 1.48E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16450 8e61649cbad723c47ca61b146d9dfbee 332 Gene3D G3DSA:3.40.50.300 1 201 5.6E-13 T 28-03-2018 DDI_RS16450 8e61649cbad723c47ca61b146d9dfbee 332 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 167 271 1.3E-11 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS16450 8e61649cbad723c47ca61b146d9dfbee 332 Pfam PF13175 AAA ATPase domain 3 59 2.0E-10 T 28-03-2018 DDI_RS11405 9575fe5ee00ad17f41e7a4c8ff897b7b 499 SUPERFAMILY SSF101960 41 86 1.18E-134 T 28-03-2018 DDI_RS11405 9575fe5ee00ad17f41e7a4c8ff897b7b 499 SUPERFAMILY SSF101960 129 496 1.18E-134 T 28-03-2018 DDI_RS11405 9575fe5ee00ad17f41e7a4c8ff897b7b 499 Pfam PF01458 Uncharacterized protein family (UPF0051) 238 470 1.5E-66 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 DDI_RS11405 9575fe5ee00ad17f41e7a4c8ff897b7b 499 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 490 3.7E-191 T 28-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 SUPERFAMILY SSF55021 336 423 6.64E-28 T 28-03-2018 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 5.3E-78 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 1.7E-28 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 2.0E-23 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 Gene3D G3DSA:3.40.50.1100 149 330 1.5E-47 T 28-03-2018 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 Gene3D G3DSA:3.40.50.1100 37 148 1.4E-31 T 28-03-2018 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 Gene3D G3DSA:3.40.1020.10 338 513 1.5E-71 T 28-03-2018 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 SUPERFAMILY SSF53686 15 365 4.85E-100 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 SUPERFAMILY SSF55021 420 512 2.52E-24 T 28-03-2018 DDI_RS18925 eb69334718843ad15bbe9411cd61480b 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 1.7E-263 T 28-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DDI_RS08125 df182181e998acbd424738eda94017cc 204 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 1 204 40.735 T 28-03-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 DDI_RS08125 df182181e998acbd424738eda94017cc 204 PIRSF PIRSF004690 1 204 2.6E-59 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type DDI_RS08125 df182181e998acbd424738eda94017cc 204 SUPERFAMILY SSF89155 6 198 4.32E-48 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS08125 df182181e998acbd424738eda94017cc 204 Pfam PF02613 Nitrate reductase delta subunit 53 160 8.3E-20 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS08125 df182181e998acbd424738eda94017cc 204 Gene3D G3DSA:1.10.3480.10 4 204 5.0E-50 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 1.5E-117 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 SUPERFAMILY SSF52540 11 205 2.19E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 Gene3D G3DSA:3.40.50.300 3 56 1.2E-13 T 28-03-2018 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 SUPERFAMILY SSF54814 182 297 1.44E-41 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 Gene3D G3DSA:3.40.50.300 57 183 9.1E-17 T 28-03-2018 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 5.2E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 5.2E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 4.4E-40 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 Gene3D G3DSA:3.30.300.20 186 300 1.6E-43 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.646 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 9.2E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS14265 1e554daa81cadd865672ee022bb04469 301 Pfam PF07650 KH domain 209 285 1.7E-19 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS17950 d4ee7df04c2b2c3c98f8d285094c766c 141 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 2.6E-54 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 DDI_RS17950 d4ee7df04c2b2c3c98f8d285094c766c 141 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 28-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site DDI_RS17950 d4ee7df04c2b2c3c98f8d285094c766c 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 1.5E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 DDI_RS17950 d4ee7df04c2b2c3c98f8d285094c766c 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.5E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 DDI_RS17950 d4ee7df04c2b2c3c98f8d285094c766c 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 1.5E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 DDI_RS17950 d4ee7df04c2b2c3c98f8d285094c766c 141 SUPERFAMILY SSF81330 12 127 2.22E-36 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 DDI_RS17950 d4ee7df04c2b2c3c98f8d285094c766c 141 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 1.2E-46 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 DDI_RS17950 d4ee7df04c2b2c3c98f8d285094c766c 141 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 30.036 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 DDI_RS06035 a1a3f6ae4b58fa510bb9c741f09711c0 383 Pfam PF07969 Amidohydrolase family 245 383 2.3E-8 T 28-03-2018 IPR013108 Amidohydrolase 3 DDI_RS06035 a1a3f6ae4b58fa510bb9c741f09711c0 383 Gene3D G3DSA:2.30.40.10 2 57 4.3E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS06035 a1a3f6ae4b58fa510bb9c741f09711c0 383 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 7 383 9.1E-153 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS06035 a1a3f6ae4b58fa510bb9c741f09711c0 383 SUPERFAMILY SSF51556 55 350 3.3E-17 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS06035 a1a3f6ae4b58fa510bb9c741f09711c0 383 PIRSF PIRSF038971 4 383 4.7E-152 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS06035 a1a3f6ae4b58fa510bb9c741f09711c0 383 Gene3D G3DSA:3.20.20.140 58 364 5.4E-25 T 28-03-2018 DDI_RS06035 a1a3f6ae4b58fa510bb9c741f09711c0 383 SUPERFAMILY SSF51338 6 55 1.57E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS06035 a1a3f6ae4b58fa510bb9c741f09711c0 383 SUPERFAMILY SSF51338 350 382 1.57E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS07800 76a4a4c245de906bcd34dac494897669 357 Gene3D G3DSA:3.40.50.1820 99 344 5.7E-11 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS07800 76a4a4c245de906bcd34dac494897669 357 Gene3D G3DSA:1.20.1440.110 8 95 0.0025 T 28-03-2018 DDI_RS07800 76a4a4c245de906bcd34dac494897669 357 SUPERFAMILY SSF53474 23 302 5.02E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 4.8E-67 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 28-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.966 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 Gene3D G3DSA:3.30.420.10 2 158 1.5E-50 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 SUPERFAMILY SSF53098 3 156 2.77E-55 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDI_RS08680 1dd4af6181b75f527b29a38ba3c7b0d1 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 7.0E-82 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 Pfam PF01751 Toprim domain 420 532 5.7E-18 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 SUPERFAMILY SSF55874 4 220 1.05E-74 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 Gene3D G3DSA:3.40.50.670 403 800 4.6E-108 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 SMART SM00387 31 175 2.3E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 SUPERFAMILY SSF56719 395 561 5.75E-86 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 SUPERFAMILY SSF56719 729 794 5.75E-86 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 SMART SM00433 35 796 1.3E-279 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 756 768 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 361 375 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 471 480 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 5 15 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 181 196 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 221 243 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 375 395 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 772 788 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 196 209 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR01159 DNA gyrase subunit B signature 313 329 7.1E-81 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 792 3.9E-30 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 SUPERFAMILY SSF54211 222 393 1.59E-62 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 Gene3D G3DSA:3.30.230.10 222 393 1.7E-65 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 803 0.0 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 421 435 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 488 504 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 269 282 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 506 523 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 735 751 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 526 538 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.4E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 3.3E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 Gene3D G3DSA:3.30.565.10 17 221 7.7E-75 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 803 110.348 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS20345 f508926ad90c680d4681cef2a52d578d 803 Pfam PF00204 DNA gyrase B 222 391 3.1E-60 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.949 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 1.8E-129 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 SUPERFAMILY SSF88946 12 122 1.26E-39 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 Gene3D G3DSA:1.10.601.10 12 122 1.2E-32 T 28-03-2018 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 Pfam PF00140 Sigma-70 factor, region 1.2 19 40 2.1E-5 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 8.1E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 8.1E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 8.1E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 8.1E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 Pfam PF04545 Sigma-70, region 4 229 280 4.8E-16 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 Gene3D G3DSA:1.10.10.10 223 285 2.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 Pfam PF04542 Sigma-70 region 2 53 122 4.6E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 SUPERFAMILY SSF88659 200 284 8.04E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 6.1E-35 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS19355 22fe6d71396c2dfdd8b454cfa329bde6 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS18750 2c55ffacb987995d054395c1f4e475ac 257 SMART SM00062 29 252 2.0E-64 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS18750 2c55ffacb987995d054395c1f4e475ac 257 Gene3D G3DSA:3.40.190.10 128 212 7.3E-17 T 28-03-2018 DDI_RS18750 2c55ffacb987995d054395c1f4e475ac 257 SUPERFAMILY SSF53850 1 253 3.29E-58 T 28-03-2018 DDI_RS18750 2c55ffacb987995d054395c1f4e475ac 257 Gene3D G3DSA:3.40.190.10 22 127 1.2E-26 T 28-03-2018 DDI_RS18750 2c55ffacb987995d054395c1f4e475ac 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS18750 2c55ffacb987995d054395c1f4e475ac 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 251 1.2E-51 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 Gene3D G3DSA:3.40.250.10 160 284 9.9E-25 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 SMART SM00450 159 279 6.7E-16 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 SMART SM00450 10 135 2.3E-21 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 Gene3D G3DSA:3.40.250.10 1 154 6.3E-30 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 ProSitePatterns PS00380 Rhodanese signature 1. 45 56 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 SUPERFAMILY SSF52821 162 284 5.5E-35 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 ProSitePatterns PS00683 Rhodanese C-terminal signature. 263 273 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 Pfam PF00581 Rhodanese-like domain 162 274 1.3E-10 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 Pfam PF00581 Rhodanese-like domain 12 131 6.2E-14 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS14045 3414ab1d1c0d00eb3bc4d37a009526f7 284 SUPERFAMILY SSF52821 8 151 2.23E-38 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS04035 da6572bb768666b2f807bb0979895335 348 SUPERFAMILY SSF53774 25 347 5.5E-97 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 PIRSF PIRSF500176 24 348 5.5E-68 T 28-03-2018 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 Gene3D G3DSA:3.40.50.1170 24 236 1.6E-51 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 SMART SM00870 27 342 2.5E-130 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 Pfam PF00710 Asparaginase, N-terminal 27 219 4.1E-57 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 Gene3D G3DSA:3.40.50.40 240 348 2.8E-26 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 18 348 1.9E-131 T 28-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 PRINTS PR00139 Asparaginase/glutaminase family signature 108 126 1.2E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 PRINTS PR00139 Asparaginase/glutaminase family signature 28 39 1.2E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 PRINTS PR00139 Asparaginase/glutaminase family signature 287 305 1.2E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 109 119 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 30 38 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DDI_RS04035 da6572bb768666b2f807bb0979895335 348 PIRSF PIRSF001220 22 348 1.9E-83 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 SMART SM00798 137 461 4.3E-217 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.598 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 Gene3D G3DSA:3.40.50.1380 1 196 6.9E-78 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 Pfam PF02142 MGS-like domain 19 132 5.9E-30 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 SUPERFAMILY SSF53927 221 529 2.21E-130 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.2E-263 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 3.4E-119 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 SMART SM00851 19 132 7.4E-62 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 SUPERFAMILY SSF52335 7 196 2.62E-71 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 PIRSF PIRSF000414 1 529 1.6E-228 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 Gene3D G3DSA:3.40.140.20 226 375 1.7E-55 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS21560 4e3640f41ed6dbb8d006a4576a8dd900 529 Gene3D G3DSA:3.40.140.20 376 519 1.1E-53 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS09200 f0494b4b9e55e181a61176f445d402b6 234 PIRSF PIRSF006102 1 218 5.9E-79 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 DDI_RS09200 f0494b4b9e55e181a61176f445d402b6 234 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.469 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 DDI_RS09200 f0494b4b9e55e181a61176f445d402b6 234 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 1.4E-65 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 DDI_RS09200 f0494b4b9e55e181a61176f445d402b6 234 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 1.7E-85 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 DDI_RS00325 ae938338c2ad71f388002d0215a85873 142 Pfam PF00572 Ribosomal protein L13 15 138 1.1E-56 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DDI_RS00325 ae938338c2ad71f388002d0215a85873 142 SUPERFAMILY SSF52161 1 140 3.01E-60 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DDI_RS00325 ae938338c2ad71f388002d0215a85873 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.61 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DDI_RS00325 ae938338c2ad71f388002d0215a85873 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.8E-67 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS00325 ae938338c2ad71f388002d0215a85873 142 Gene3D G3DSA:3.90.1180.10 1 142 1.0E-62 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DDI_RS00325 ae938338c2ad71f388002d0215a85873 142 PIRSF PIRSF002181 1 142 2.8E-51 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DDI_RS00325 ae938338c2ad71f388002d0215a85873 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 28-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 Gene3D G3DSA:3.40.630.30 4 140 7.4E-12 T 28-03-2018 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 Gene3D G3DSA:3.40.50.620 141 341 1.4E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 SUPERFAMILY SSF52374 308 340 1.72E-23 T 28-03-2018 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 SUPERFAMILY SSF52374 150 269 1.72E-23 T 28-03-2018 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 SUPERFAMILY SSF55729 38 120 4.9E-13 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 20 343 4.6E-120 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 114 343 2.0E-103 T 28-03-2018 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 150 208 4.1E-11 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 SMART SM00764 150 338 1.4E-128 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 Pfam PF00583 Acetyltransferase (GNAT) family 40 113 3.7E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 PIRSF PIRSF005751 3 346 6.7E-129 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 DDI_RS08280 45b5ef73df8d583c2b43bf6dee51e136 347 Pfam PF08218 Citrate lyase ligase C-terminal domain 150 337 1.1E-76 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 DDI_RS16305 0c98db984ed4acfee650c7536454c0db 317 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 4 289 2.0E-109 T 28-03-2018 IPR013398 CRISPR-associated protein Csy2 DDI_RS16305 0c98db984ed4acfee650c7536454c0db 317 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 5 295 3.6E-106 T 28-03-2018 IPR013398 CRISPR-associated protein Csy2 DDI_RS14050 5b0e87c5a4df2291239d689a0d4e5957 265 Pfam PF14581 SseB protein C-terminal domain 143 250 4.2E-33 T 28-03-2018 IPR027945 SseB protein, C-terminal DDI_RS14050 5b0e87c5a4df2291239d689a0d4e5957 265 Pfam PF07179 SseB protein N-terminal domain 9 126 1.1E-25 T 28-03-2018 IPR009839 SseB protein N-terminal domain DDI_RS13560 533a5a6e0a51034c7b4930aaceec8794 109 SUPERFAMILY SSF69721 2 109 3.01E-41 T 28-03-2018 IPR025526 DsrC-like domain DDI_RS13560 533a5a6e0a51034c7b4930aaceec8794 109 Gene3D G3DSA:3.30.1420.10 2 39 1.3E-14 T 28-03-2018 DDI_RS13560 533a5a6e0a51034c7b4930aaceec8794 109 Gene3D G3DSA:1.10.10.370 40 108 4.3E-34 T 28-03-2018 DDI_RS13560 533a5a6e0a51034c7b4930aaceec8794 109 Pfam PF04358 DsrC like protein 4 109 6.6E-46 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE DDI_RS13560 533a5a6e0a51034c7b4930aaceec8794 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 1.3E-50 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE DDI_RS13560 533a5a6e0a51034c7b4930aaceec8794 109 PIRSF PIRSF006223 2 109 8.2E-46 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE DDI_RS04190 d1206e408242f091c7f80d7ee75a188d 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 216 228 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site DDI_RS04190 d1206e408242f091c7f80d7ee75a188d 303 Gene3D G3DSA:1.10.600.10 1 303 7.9E-85 T 28-03-2018 IPR008949 Isoprenoid synthase domain DDI_RS04190 d1206e408242f091c7f80d7ee75a188d 303 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site DDI_RS04190 d1206e408242f091c7f80d7ee75a188d 303 SUPERFAMILY SSF48576 3 281 4.14E-86 T 28-03-2018 IPR008949 Isoprenoid synthase domain DDI_RS04190 d1206e408242f091c7f80d7ee75a188d 303 Pfam PF00348 Polyprenyl synthetase 35 261 2.5E-55 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 DDI_RS01305 f6e8e44a6c05545e57759e19f9ad421e 187 Gene3D G3DSA:3.40.30.10 3 153 6.8E-31 T 28-03-2018 DDI_RS01305 f6e8e44a6c05545e57759e19f9ad421e 187 Gene3D G3DSA:3.30.1020.10 154 183 9.6E-10 T 28-03-2018 DDI_RS01305 f6e8e44a6c05545e57759e19f9ad421e 187 Pfam PF00578 AhpC/TSA family 6 133 6.7E-32 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DDI_RS01305 f6e8e44a6c05545e57759e19f9ad421e 187 PIRSF PIRSF000239 1 187 5.2E-52 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DDI_RS01305 f6e8e44a6c05545e57759e19f9ad421e 187 SUPERFAMILY SSF52833 1 186 2.67E-53 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01305 f6e8e44a6c05545e57759e19f9ad421e 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 9.3E-7 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DDI_RS01305 f6e8e44a6c05545e57759e19f9ad421e 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.6E-102 T 28-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 Gene3D G3DSA:3.40.50.720 1 235 1.1E-57 T 28-03-2018 DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 8.6E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 8.6E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.6E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 8.6E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 8.6E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 SUPERFAMILY SSF51735 3 231 3.66E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 Pfam PF00106 short chain dehydrogenase 2 187 1.3E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09330 25de8707d6a5d819ecb12e024935b4af 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20050 e74613820de2c51b2f6f46eef2077f5a 245 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 239 7.7E-64 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 Pfam PF00672 HAMP domain 229 277 2.6E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 SMART SM00304 229 281 2.3E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 SMART SM00319 51 191 3.1E-6 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 SUPERFAMILY SSF58104 249 530 1.96E-74 T 28-03-2018 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 SUPERFAMILY SSF47170 41 190 8.63E-16 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 8.8E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 457 486 8.8E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 8.8E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 303 332 8.8E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 SMART SM00283 282 529 5.4E-89 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 Gene3D G3DSA:1.10.287.1060 257 340 4.2E-4 T 28-03-2018 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 497 1.7E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 Gene3D G3DSA:1.20.120.30 38 201 2.0E-25 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 Gene3D G3DSA:1.10.287.950 341 533 1.7E-48 T 28-03-2018 DDI_RS01275 a5b7c1209391ac3537f74c905e775db7 568 Pfam PF02203 Tar ligand binding domain homologue 16 190 3.5E-30 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS13510 fc1d28af2440cfbc783b8567872688ec 718 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 436 709 1.2E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13510 fc1d28af2440cfbc783b8567872688ec 718 SUPERFAMILY SSF161098 409 482 7.52E-5 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13510 fc1d28af2440cfbc783b8567872688ec 718 SUPERFAMILY SSF50969 68 280 7.06E-12 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like DDI_RS13510 fc1d28af2440cfbc783b8567872688ec 718 Gene3D G3DSA:2.130.10.120 221 389 1.1E-5 T 28-03-2018 DDI_RS13510 fc1d28af2440cfbc783b8567872688ec 718 Gene3D G3DSA:2.130.10.10 48 220 3.4E-5 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS13510 fc1d28af2440cfbc783b8567872688ec 718 SUPERFAMILY SSF161098 495 700 3.66E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13510 fc1d28af2440cfbc783b8567872688ec 718 Gene3D G3DSA:1.10.3720.10 492 713 4.5E-31 T 28-03-2018 DDI_RS13510 fc1d28af2440cfbc783b8567872688ec 718 Gene3D G3DSA:1.10.3720.10 411 491 7.0E-6 T 28-03-2018 DDI_RS11060 853f6a9ef0298a9fc33a4fe14f767e2e 570 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 86 108 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site DDI_RS11060 853f6a9ef0298a9fc33a4fe14f767e2e 570 Gene3D G3DSA:3.10.105.10 307 512 3.6E-53 T 28-03-2018 DDI_RS11060 853f6a9ef0298a9fc33a4fe14f767e2e 570 Gene3D G3DSA:3.40.190.10 212 306 1.1E-24 T 28-03-2018 DDI_RS11060 853f6a9ef0298a9fc33a4fe14f767e2e 570 PIRSF PIRSF002741 1 542 4.6E-96 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS11060 853f6a9ef0298a9fc33a4fe14f767e2e 570 Gene3D G3DSA:3.90.76.10 47 211 7.8E-31 T 28-03-2018 DDI_RS11060 853f6a9ef0298a9fc33a4fe14f767e2e 570 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 459 9.5E-82 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS11060 853f6a9ef0298a9fc33a4fe14f767e2e 570 SUPERFAMILY SSF53850 38 539 8.51E-130 T 28-03-2018 DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 SMART SM00345 26 84 1.7E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 83 3.5E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 SUPERFAMILY SSF53383 126 483 6.68E-79 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 Gene3D G3DSA:3.40.640.10 139 386 1.6E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 SUPERFAMILY SSF46785 18 88 5.36E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 4.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 4.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 Pfam PF00155 Aminotransferase class I and II 151 451 3.4E-23 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 Gene3D G3DSA:3.90.1150.10 387 485 9.5E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS02685 bf0f11dc7e689ca588a5fc31161285ed 494 Gene3D G3DSA:1.10.10.10 12 97 9.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 7 477 62.248 T 28-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 424 472 2.0E-8 T 28-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 Pfam PF01189 16S rRNA methyltransferase RsmB/F 120 310 1.0E-47 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 10 106 1.1E-25 T 28-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 92 106 6.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 294 311 6.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 240 256 6.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 123 133 6.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 190 202 6.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 42 311 5.6E-101 T 28-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 Gene3D G3DSA:3.40.50.150 102 318 1.1E-59 T 28-03-2018 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 Gene3D G3DSA:3.30.70.1170 30 101 4.2E-19 T 28-03-2018 DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 SUPERFAMILY SSF53335 18 311 4.18E-66 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS10635 8fe15f69dab9005f7ef3fdffac1e46aa 482 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 189 200 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS14485 ec8e1c1a34460402fe12fce93618d480 426 Gene3D G3DSA:3.40.640.10 182 311 5.6E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS14485 ec8e1c1a34460402fe12fce93618d480 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.107 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DDI_RS14485 ec8e1c1a34460402fe12fce93618d480 426 Gene3D G3DSA:3.90.1150.10 312 426 3.9E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS14485 ec8e1c1a34460402fe12fce93618d480 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.4E-195 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DDI_RS14485 ec8e1c1a34460402fe12fce93618d480 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS14485 ec8e1c1a34460402fe12fce93618d480 426 Pfam PF00202 Aminotransferase class-III 32 395 4.8E-79 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS14485 ec8e1c1a34460402fe12fce93618d480 426 Gene3D G3DSA:3.90.1150.10 1 181 1.1E-44 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS14485 ec8e1c1a34460402fe12fce93618d480 426 SUPERFAMILY SSF53383 2 425 3.2E-135 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS07675 c9003228865b136bd0e775e366462584 232 Gene3D G3DSA:3.30.2350.10 63 227 7.0E-38 T 28-03-2018 DDI_RS07675 c9003228865b136bd0e775e366462584 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.4E-57 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDI_RS07675 c9003228865b136bd0e775e366462584 232 SUPERFAMILY SSF55120 61 227 1.41E-46 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS07675 c9003228865b136bd0e775e366462584 232 Gene3D G3DSA:3.10.290.10 1 62 1.6E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS07675 c9003228865b136bd0e775e366462584 232 Pfam PF00849 RNA pseudouridylate synthase 62 192 4.2E-18 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS07675 c9003228865b136bd0e775e366462584 232 Pfam PF01479 S4 domain 1 47 5.4E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS07675 c9003228865b136bd0e775e366462584 232 SMART SM00363 1 60 1.1E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS07675 c9003228865b136bd0e775e366462584 232 SUPERFAMILY SSF55174 1 55 8.98E-12 T 28-03-2018 DDI_RS07675 c9003228865b136bd0e775e366462584 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDI_RS04110 d99af47eab0f8177d3d376a5dcc363a7 200 Gene3D G3DSA:3.40.30.10 3 161 3.3E-39 T 28-03-2018 DDI_RS04110 d99af47eab0f8177d3d376a5dcc363a7 200 PIRSF PIRSF000239 1 199 4.5E-57 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DDI_RS04110 d99af47eab0f8177d3d376a5dcc363a7 200 Pfam PF00578 AhpC/TSA family 5 139 1.7E-34 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DDI_RS04110 d99af47eab0f8177d3d376a5dcc363a7 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 6.7E-11 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DDI_RS04110 d99af47eab0f8177d3d376a5dcc363a7 200 SUPERFAMILY SSF52833 1 195 2.68E-65 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS04110 d99af47eab0f8177d3d376a5dcc363a7 200 Gene3D G3DSA:3.30.1020.10 162 199 4.0E-14 T 28-03-2018 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 3.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 3.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Gene3D G3DSA:3.40.50.300 68 185 1.3E-29 T 28-03-2018 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Gene3D G3DSA:2.40.50.250 483 573 1.8E-38 T 28-03-2018 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Gene3D G3DSA:2.40.30.10 186 300 1.5E-20 T 28-03-2018 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 SUPERFAMILY SSF54980 398 512 1.58E-26 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 SUPERFAMILY SSF50447 151 299 6.85E-32 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.2E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Gene3D G3DSA:3.30.70.240 401 481 2.0E-17 T 28-03-2018 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Gene3D G3DSA:3.30.70.870 302 400 1.4E-31 T 28-03-2018 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.3E-56 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 SUPERFAMILY SSF54980 302 387 1.98E-15 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Gene3D G3DSA:3.40.50.300 2 67 1.2E-10 T 28-03-2018 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Pfam PF00679 Elongation factor G C-terminus 397 476 6.6E-21 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 7.6E-291 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 SUPERFAMILY SSF52540 3 207 5.35E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19800 2d510167ed4bdf8b5b7298e30a738ead 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.4E-9 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Pfam PF07499 RuvA, C-terminal domain 160 202 2.0E-15 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Gene3D G3DSA:1.10.150.20 81 122 7.2E-14 T 28-03-2018 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.0E-17 T 28-03-2018 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 2.1E-67 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Pfam PF01330 RuvA N terminal domain 2 62 3.0E-18 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Gene3D G3DSA:2.40.50.140 2 56 4.5E-22 T 28-03-2018 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 SMART SM00278 73 92 0.054 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 SMART SM00278 108 127 0.13 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Gene3D G3DSA:1.10.150.20 123 157 0.12 T 28-03-2018 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Gene3D G3DSA:1.10.8.10 158 203 1.1E-13 T 28-03-2018 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 SUPERFAMILY SSF46929 159 202 8.76E-10 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 SUPERFAMILY SSF47781 66 137 5.28E-23 T 28-03-2018 IPR010994 RuvA domain 2-like DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 32.401 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 SUPERFAMILY SSF50249 2 63 5.14E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08690 da332074974cd034be65ede95c2c2c84 204 Gene3D G3DSA:1.10.150.280 57 80 0.0093 T 28-03-2018 DDI_RS02680 e5a232af0849b0612d091cdd0f16be56 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 5.0E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS02680 e5a232af0849b0612d091cdd0f16be56 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 5.0E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS02680 e5a232af0849b0612d091cdd0f16be56 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 5.0E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS02680 e5a232af0849b0612d091cdd0f16be56 151 Pfam PF12802 MarR family 34 92 3.5E-12 T 28-03-2018 DDI_RS02680 e5a232af0849b0612d091cdd0f16be56 151 Gene3D G3DSA:1.10.10.10 1 150 5.5E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02680 e5a232af0849b0612d091cdd0f16be56 151 SMART SM00347 29 129 9.1E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS02680 e5a232af0849b0612d091cdd0f16be56 151 SUPERFAMILY SSF46785 10 144 6.63E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12715 98dcd85b88ad2069b013af6a673df4d6 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 8.6E-21 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12715 98dcd85b88ad2069b013af6a673df4d6 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 41.104 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12715 98dcd85b88ad2069b013af6a673df4d6 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 45 182 1.7E-67 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12715 98dcd85b88ad2069b013af6a673df4d6 224 SUPERFAMILY SSF56770 43 189 4.45E-62 T 28-03-2018 DDI_RS12715 98dcd85b88ad2069b013af6a673df4d6 224 Gene3D G3DSA:3.40.50.700 35 210 2.1E-36 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12715 98dcd85b88ad2069b013af6a673df4d6 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 101 172 4.5E-12 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 SUPERFAMILY SSF51998 176 699 4.88E-180 T 28-03-2018 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 Pfam PF02867 Ribonucleotide reductase, barrel domain 177 694 8.6E-138 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 567 589 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 104 698 1.0E-156 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 Pfam PF08343 Ribonucleotide reductase N-terminal 17 98 3.6E-29 T 28-03-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 466 488 1.4E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 578 605 1.4E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 252 271 1.4E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 427 450 1.4E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 494 517 1.4E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 383 394 1.4E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 Gene3D G3DSA:3.20.70.20 80 702 1.7E-159 T 28-03-2018 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 SUPERFAMILY SSF48168 16 175 4.32E-54 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14610 e5e180ff199a54da66a213abb272012b 715 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 16 715 0.0 T 28-03-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS04840 b2e1bd20d4c47cfab95a10e4642155b8 105 Gene3D G3DSA:3.30.460.10 1 105 1.9E-35 T 28-03-2018 DDI_RS04840 b2e1bd20d4c47cfab95a10e4642155b8 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 25.169 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DDI_RS04840 b2e1bd20d4c47cfab95a10e4642155b8 105 SUPERFAMILY SSF81301 2 105 2.94E-38 T 28-03-2018 DDI_RS04840 b2e1bd20d4c47cfab95a10e4642155b8 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 7.3E-29 T 28-03-2018 DDI_RS04840 b2e1bd20d4c47cfab95a10e4642155b8 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 7.1E-39 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 2.2E-44 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 599 9.6E-176 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 599 5.3E-103 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 24.85 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 Gene3D G3DSA:1.10.645.10 412 595 5.6E-31 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 SUPERFAMILY SSF143243 24 228 6.15E-60 T 28-03-2018 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 176 1.3E-42 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 Gene3D G3DSA:1.10.645.10 210 411 7.4E-48 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 599 71.952 T 28-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 165 2.0E-21 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 SUPERFAMILY SSF56762 224 599 4.19E-121 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12710 11a566f8e0db5c2622cb0a235eda2664 599 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 599 42.059 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 PIRSF PIRSF001499 1 372 5.6E-181 T 28-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 Pfam PF02153 Prephenate dehydrogenase 139 344 4.0E-29 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 5.4E-43 T 28-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 Gene3D G3DSA:1.10.3660.10 249 372 1.3E-30 T 28-03-2018 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 SUPERFAMILY SSF48179 241 366 1.7E-41 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 Pfam PF01817 Chorismate mutase type II 9 86 7.5E-20 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 Gene3D G3DSA:1.20.59.10 2 86 5.0E-24 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 SMART SM00830 9 89 2.1E-30 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 SUPERFAMILY SSF48600 4 88 2.01E-23 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 SUPERFAMILY SSF51735 91 238 2.2E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS14725 26a56c3e854c2663d7a2cd3bad4129fb 372 Gene3D G3DSA:3.40.50.720 87 247 1.7E-26 T 28-03-2018 DDI_RS17905 f84503d105395d6b172d4a220c1b0c01 275 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 9 91 1.6E-26 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DDI_RS17905 f84503d105395d6b172d4a220c1b0c01 275 SUPERFAMILY SSF51735 105 265 2.51E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17905 f84503d105395d6b172d4a220c1b0c01 275 Gene3D G3DSA:3.40.50.720 115 275 1.5E-32 T 28-03-2018 DDI_RS17905 f84503d105395d6b172d4a220c1b0c01 275 SUPERFAMILY SSF53223 6 104 4.09E-31 T 28-03-2018 DDI_RS17905 f84503d105395d6b172d4a220c1b0c01 275 Gene3D G3DSA:3.40.50.10860 2 114 9.8E-38 T 28-03-2018 DDI_RS17905 f84503d105395d6b172d4a220c1b0c01 275 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 273 2.9E-94 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DDI_RS17905 f84503d105395d6b172d4a220c1b0c01 275 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 122 193 1.1E-10 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DDI_RS17905 f84503d105395d6b172d4a220c1b0c01 275 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 4 272 32.438 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DDI_RS20475 daf5a136b579109ac205ec8bbbec59e8 322 Pfam PF02685 Glucokinase 6 316 2.5E-123 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DDI_RS20475 daf5a136b579109ac205ec8bbbec59e8 322 Gene3D G3DSA:3.40.367.20 110 300 3.1E-29 T 28-03-2018 DDI_RS20475 daf5a136b579109ac205ec8bbbec59e8 322 Hamap MF_00524 Glucokinase [glk]. 4 317 35.557 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DDI_RS20475 daf5a136b579109ac205ec8bbbec59e8 322 TIGRFAM TIGR00749 glk: glucokinase 6 311 9.9E-131 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DDI_RS20475 daf5a136b579109ac205ec8bbbec59e8 322 Gene3D G3DSA:3.30.420.40 1 109 7.5E-19 T 28-03-2018 DDI_RS20475 daf5a136b579109ac205ec8bbbec59e8 322 SUPERFAMILY SSF53067 4 319 6.21E-61 T 28-03-2018 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Pfam PF02824 TGS domain 4 61 1.0E-10 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 3.8E-244 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 SUPERFAMILY SSF81271 3 61 4.25E-16 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 5.3E-14 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Gene3D G3DSA:3.10.20.30 1 64 2.6E-19 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 8.1E-51 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.877 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 SUPERFAMILY SSF52954 530 636 4.08E-33 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 SUPERFAMILY SSF55681 243 525 1.53E-95 T 28-03-2018 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 3.0E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 3.0E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 3.0E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 3.0E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 3.0E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Gene3D G3DSA:3.30.930.10 223 531 8.2E-120 T 28-03-2018 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Gene3D G3DSA:3.30.980.10 65 147 2.5E-21 T 28-03-2018 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Gene3D G3DSA:3.30.980.10 148 222 9.8E-17 T 28-03-2018 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 SUPERFAMILY SSF55186 63 241 4.97E-64 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Gene3D G3DSA:3.40.50.800 532 642 1.7E-28 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 Pfam PF03129 Anticodon binding domain 541 630 1.3E-23 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS10020 5d5a5b34a7118bb85231a018d33154e5 642 SMART SM00863 170 219 3.0E-19 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 SUPERFAMILY SSF54523 6 100 1.18E-10 T 28-03-2018 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 SUPERFAMILY SSF54523 133 176 1.18E-10 T 28-03-2018 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 3.9E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 Gene3D G3DSA:3.55.40.10 37 179 5.7E-25 T 28-03-2018 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 2 173 2.9E-19 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 Pfam PF12019 Type II transport protein GspH 74 168 2.2E-4 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 3.2E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 PRINTS PR00885 Bacterial general secretion pathway protein H signature 1 15 2.4E-18 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 PRINTS PR00885 Bacterial general secretion pathway protein H signature 16 30 2.4E-18 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 PRINTS PR00885 Bacterial general secretion pathway protein H signature 137 152 2.4E-18 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 DDI_RS13145 10658a6615bbe5f3bc62699e33f866fe 179 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS12790 3bcf737dcb9635f27fb91dbf79d657f4 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 215 2.3E-18 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS12790 3bcf737dcb9635f27fb91dbf79d657f4 302 Gene3D G3DSA:3.40.50.720 1 301 2.3E-42 T 28-03-2018 DDI_RS12790 3bcf737dcb9635f27fb91dbf79d657f4 302 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.2E-19 T 28-03-2018 IPR013549 Domain of unknown function DUF1731 DDI_RS12790 3bcf737dcb9635f27fb91dbf79d657f4 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 293 4.8E-109 T 28-03-2018 IPR010099 Epimerase family protein SDR39U1 DDI_RS12790 3bcf737dcb9635f27fb91dbf79d657f4 302 SUPERFAMILY SSF51735 1 298 1.0E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02205 e1b2e6d29ac6238ccd9adbe841ae8a37 100 Gene3D G3DSA:3.40.1440.10 1 87 5.7E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily DDI_RS02205 e1b2e6d29ac6238ccd9adbe841ae8a37 100 SUPERFAMILY SSF82771 7 76 3.92E-12 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily DDI_RS02205 e1b2e6d29ac6238ccd9adbe841ae8a37 100 Pfam PF01541 GIY-YIG catalytic domain 8 77 5.4E-12 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily DDI_RS02205 e1b2e6d29ac6238ccd9adbe841ae8a37 100 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 5 100 31.083 T 28-03-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease DDI_RS00225 4356630231ce8299169f15ca429563f6 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.3E-35 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 DDI_RS00225 4356630231ce8299169f15ca429563f6 95 Gene3D G3DSA:3.30.160.100 1 95 2.1E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 DDI_RS00225 4356630231ce8299169f15ca429563f6 95 SUPERFAMILY SSF69754 1 95 7.06E-35 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 DDI_RS00225 4356630231ce8299169f15ca429563f6 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.7E-28 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 DDI_RS15160 dc2458cdfb2db18a6a882677a14a054b 255 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DDI_RS15160 dc2458cdfb2db18a6a882677a14a054b 255 Pfam PF00795 Carbon-nitrogen hydrolase 5 241 5.9E-32 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS15160 dc2458cdfb2db18a6a882677a14a054b 255 SUPERFAMILY SSF56317 1 249 1.28E-61 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS15160 dc2458cdfb2db18a6a882677a14a054b 255 Gene3D G3DSA:3.60.110.10 1 253 1.8E-56 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 SUPERFAMILY SSF50677 204 407 2.22E-50 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 644 3.9E-219 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 SUPERFAMILY SSF47323 656 928 4.67E-76 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Gene3D G3DSA:3.40.50.620 391 633 1.3E-68 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Gene3D G3DSA:3.40.50.620 42 129 6.1E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Gene3D G3DSA:1.10.730.10 634 798 1.2E-33 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Pfam PF06827 Zinc finger found in FPG and IleRS 901 928 2.0E-9 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 847 4.0E-290 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 SUPERFAMILY SSF52374 407 651 8.85E-134 T 28-03-2018 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 SUPERFAMILY SSF52374 4 202 8.85E-134 T 28-03-2018 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Pfam PF08264 Anticodon-binding domain of tRNA 689 844 4.9E-28 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 932 21.257 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 565 574 6.5E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 6.5E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 405 420 6.5E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 6.5E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 530 543 6.5E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Gene3D G3DSA:3.30.2320.20 806 899 6.0E-24 T 28-03-2018 DDI_RS17015 d2d5f4821afb3ef5479e0737cf66b99e 941 Gene3D G3DSA:3.90.740.10 189 390 1.0E-56 T 28-03-2018 DDI_RS20995 8ab5a1074bc8c40c47327d54f28b8e43 420 Pfam PF13533 Biotin-lipoyl like 67 113 2.3E-10 T 28-03-2018 DDI_RS20995 8ab5a1074bc8c40c47327d54f28b8e43 420 Gene3D G3DSA:2.40.50.100 179 267 3.0E-6 T 28-03-2018 DDI_RS20995 8ab5a1074bc8c40c47327d54f28b8e43 420 SUPERFAMILY SSF111369 56 157 4.97E-9 T 28-03-2018 DDI_RS20995 8ab5a1074bc8c40c47327d54f28b8e43 420 Pfam PF13437 HlyD family secretion protein 229 339 2.0E-12 T 28-03-2018 DDI_RS20995 8ab5a1074bc8c40c47327d54f28b8e43 420 Gene3D G3DSA:2.40.50.100 65 163 8.6E-11 T 28-03-2018 DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 Gene3D G3DSA:3.30.420.130 335 459 3.9E-28 T 28-03-2018 DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 23 444 2.9E-200 T 28-03-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 348 447 3.7E-19 T 28-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 47 58 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 Pfam PF04055 Radical SAM superfamily 47 224 1.0E-27 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 Gene3D G3DSA:3.20.20.70 15 334 3.3E-33 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 SUPERFAMILY SSF102114 36 271 2.35E-40 T 28-03-2018 DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 SMART SM00729 41 271 0.0078 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS17505 0c11483255a6c281bb7692e7049a5f7f 464 SUPERFAMILY SSF53146 336 453 3.66E-28 T 28-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis DDI_RS01595 8f55d87a7c520acf7771f2a9b42217fe 236 PIRSF PIRSF006232 1 233 1.7E-28 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DDI_RS01595 8f55d87a7c520acf7771f2a9b42217fe 236 Pfam PF02678 Pirin 6 119 1.8E-20 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DDI_RS01595 8f55d87a7c520acf7771f2a9b42217fe 236 SUPERFAMILY SSF51182 1 234 8.05E-43 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS01595 8f55d87a7c520acf7771f2a9b42217fe 236 Gene3D G3DSA:2.60.120.10 12 134 3.9E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS01595 8f55d87a7c520acf7771f2a9b42217fe 236 Gene3D G3DSA:2.60.120.10 135 236 1.0E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS15810 c8eaffdfbdfc438276756b8f6e7469c8 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 6 89 8.7E-30 T 28-03-2018 IPR005228 Conserved hypothetical protein CHP00251 DDI_RS15810 c8eaffdfbdfc438276756b8f6e7469c8 96 SUPERFAMILY SSF69786 4 93 3.79E-31 T 28-03-2018 IPR003746 Protein of unknown function DUF167 DDI_RS15810 c8eaffdfbdfc438276756b8f6e7469c8 96 SMART SM01152 7 83 6.8E-39 T 28-03-2018 IPR003746 Protein of unknown function DUF167 DDI_RS15810 c8eaffdfbdfc438276756b8f6e7469c8 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 1.1E-25 T 28-03-2018 IPR003746 Protein of unknown function DUF167 DDI_RS15810 c8eaffdfbdfc438276756b8f6e7469c8 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 20.142 T 28-03-2018 IPR003746 Protein of unknown function DUF167 DDI_RS15810 c8eaffdfbdfc438276756b8f6e7469c8 96 Gene3D G3DSA:3.30.1200.10 1 96 3.5E-30 T 28-03-2018 IPR003746 Protein of unknown function DUF167 DDI_RS07490 47a4ca60a782f361ee2b7f6ce438b135 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 276 3.9E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07490 47a4ca60a782f361ee2b7f6ce438b135 281 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 4 54 5.5E-7 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS07490 47a4ca60a782f361ee2b7f6ce438b135 281 Gene3D G3DSA:1.10.3720.10 3 267 2.1E-45 T 28-03-2018 DDI_RS07490 47a4ca60a782f361ee2b7f6ce438b135 281 SUPERFAMILY SSF161098 74 260 4.58E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 Gene3D G3DSA:3.30.2090.10 709 796 3.5E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 Gene3D G3DSA:1.20.1640.10 817 1014 1.8E-34 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 SUPERFAMILY SSF82866 300 493 1.44E-34 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 Gene3D G3DSA:3.30.70.1430 558 663 1.5E-13 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 SUPERFAMILY SSF82714 190 271 1.7E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 8.6E-151 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 Gene3D G3DSA:3.30.70.1430 45 149 9.5E-24 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 SUPERFAMILY SSF82693 273 328 3.56E-15 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 SUPERFAMILY SSF82693 144 187 3.56E-15 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 SUPERFAMILY SSF82714 710 795 1.44E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 SUPERFAMILY SSF82693 45 140 8.16E-15 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.1E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 1.1E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.1E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 1.1E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.1E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.1E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 Gene3D G3DSA:3.90.1150.10 157 238 0.029 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 Gene3D G3DSA:1.20.1640.10 314 502 2.6E-31 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 Gene3D G3DSA:3.30.70.1320 239 313 8.2E-15 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 SUPERFAMILY SSF82693 557 633 6.63E-6 T 28-03-2018 DDI_RS06555 8517e6320c0da468b7d7a938a75f0543 1021 SUPERFAMILY SSF82866 793 1016 7.85E-42 T 28-03-2018 DDI_RS19850 cec72b4e67cbd294ac5c7ef64884eb1a 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDI_RS19850 cec72b4e67cbd294ac5c7ef64884eb1a 207 PIRSF PIRSF001488 1 207 7.5E-87 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DDI_RS19850 cec72b4e67cbd294ac5c7ef64884eb1a 207 Pfam PF01323 DSBA-like thioredoxin domain 40 191 5.3E-29 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 DDI_RS19850 cec72b4e67cbd294ac5c7ef64884eb1a 207 Gene3D G3DSA:3.40.30.10 17 207 4.3E-35 T 28-03-2018 DDI_RS19850 cec72b4e67cbd294ac5c7ef64884eb1a 207 SUPERFAMILY SSF52833 21 204 2.12E-44 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS03245 6e2a4cd4bbb87cdc921e3241309ee34b 177 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 167 92.543 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria DDI_RS03245 6e2a4cd4bbb87cdc921e3241309ee34b 177 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 167 7.8E-77 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria DDI_RS03245 6e2a4cd4bbb87cdc921e3241309ee34b 177 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.8E-35 T 28-03-2018 IPR005134 Uncharacterised protein family UPF0114 DDI_RS05145 550d045874bfabe7194881722faa4ff1 379 PIRSF PIRSF000267 2 378 2.1E-131 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DDI_RS05145 550d045874bfabe7194881722faa4ff1 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.8E-109 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DDI_RS05145 550d045874bfabe7194881722faa4ff1 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 4.2E-188 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 SUPERFAMILY SSF52540 6 219 2.43E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.4E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 SUPERFAMILY SSF50447 205 301 3.73E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.22 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 Gene3D G3DSA:3.40.50.300 75 203 2.5E-32 T 28-03-2018 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 SUPERFAMILY SSF50465 298 393 3.45E-35 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 5.1E-239 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 Gene3D G3DSA:3.40.50.300 2 74 5.5E-11 T 28-03-2018 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 Gene3D G3DSA:2.40.30.10 300 393 2.5E-32 T 28-03-2018 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 Gene3D G3DSA:2.40.30.10 206 299 3.7E-32 T 28-03-2018 DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.2E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DDI_RS18115 a49271419ed6f191611d3cb36b6bb8f3 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.1E-59 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS02470 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13384 Homeodomain-like domain 26 73 5.5E-9 T 28-03-2018 DDI_RS02470 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13358 DDE superfamily endonuclease 177 312 1.9E-31 T 28-03-2018 DDI_RS02470 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13592 Winged helix-turn helix 108 155 2.0E-8 T 28-03-2018 IPR025959 Winged helix-turn helix domain DDI_RS02470 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:1.10.10.60 11 53 2.2E-4 T 28-03-2018 DDI_RS02470 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:1.10.10.10 54 112 6.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02470 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:3.30.420.10 190 330 8.6E-10 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS02470 70bdbe23fcf868249a7db566785cb001 345 SUPERFAMILY SSF46689 22 140 4.84E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS02860 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13384 Homeodomain-like domain 26 73 5.5E-9 T 28-03-2018 DDI_RS02860 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13358 DDE superfamily endonuclease 177 312 1.9E-31 T 28-03-2018 DDI_RS02860 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13592 Winged helix-turn helix 108 155 2.0E-8 T 28-03-2018 IPR025959 Winged helix-turn helix domain DDI_RS02860 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:1.10.10.60 11 53 2.2E-4 T 28-03-2018 DDI_RS02860 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:1.10.10.10 54 112 6.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02860 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:3.30.420.10 190 330 8.6E-10 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS02860 70bdbe23fcf868249a7db566785cb001 345 SUPERFAMILY SSF46689 22 140 4.84E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS10165 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13384 Homeodomain-like domain 26 73 5.5E-9 T 28-03-2018 DDI_RS10165 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13358 DDE superfamily endonuclease 177 312 1.9E-31 T 28-03-2018 DDI_RS10165 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13592 Winged helix-turn helix 108 155 2.0E-8 T 28-03-2018 IPR025959 Winged helix-turn helix domain DDI_RS10165 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:1.10.10.60 11 53 2.2E-4 T 28-03-2018 DDI_RS10165 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:1.10.10.10 54 112 6.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10165 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:3.30.420.10 190 330 8.6E-10 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS10165 70bdbe23fcf868249a7db566785cb001 345 SUPERFAMILY SSF46689 22 140 4.84E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS14415 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13384 Homeodomain-like domain 26 73 5.5E-9 T 28-03-2018 DDI_RS14415 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13358 DDE superfamily endonuclease 177 312 1.9E-31 T 28-03-2018 DDI_RS14415 70bdbe23fcf868249a7db566785cb001 345 Pfam PF13592 Winged helix-turn helix 108 155 2.0E-8 T 28-03-2018 IPR025959 Winged helix-turn helix domain DDI_RS14415 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:1.10.10.60 11 53 2.2E-4 T 28-03-2018 DDI_RS14415 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:1.10.10.10 54 112 6.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14415 70bdbe23fcf868249a7db566785cb001 345 Gene3D G3DSA:3.30.420.10 190 330 8.6E-10 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS14415 70bdbe23fcf868249a7db566785cb001 345 SUPERFAMILY SSF46689 22 140 4.84E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS10720 56653d4ee59b18e2ae2c8ba7c6af4c46 188 Pfam PF01713 Smr domain 91 170 2.4E-18 T 28-03-2018 IPR002625 Smr domain DDI_RS10720 56653d4ee59b18e2ae2c8ba7c6af4c46 188 SUPERFAMILY SSF160443 88 170 1.7E-12 T 28-03-2018 IPR002625 Smr domain DDI_RS10720 56653d4ee59b18e2ae2c8ba7c6af4c46 188 SMART SM00463 86 170 8.6E-12 T 28-03-2018 IPR002625 Smr domain DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 371 1.2E-23 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 2.1E-22 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 SUPERFAMILY SSF52540 4 168 1.22E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 Gene3D G3DSA:1.20.120.430 2 67 9.6E-16 T 28-03-2018 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 SUPERFAMILY SSF52540 204 470 2.41E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 Pfam PF01926 50S ribosome-binding GTPase 210 327 5.5E-25 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 7.3E-28 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 PIRSF PIRSF006485 1 471 2.6E-178 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 Gene3D G3DSA:1.20.120.430 68 254 1.7E-38 T 28-03-2018 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 2.2E-178 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.9E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.9E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 Gene3D G3DSA:3.40.50.300 255 380 1.1E-23 T 28-03-2018 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 463 1.3E-24 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 Hamap MF_00195 GTPase Der [der]. 2 466 39.312 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 DDI_RS14000 245abd1d1a6848eb1fc13b6f8f165562 495 Gene3D G3DSA:3.30.300.20 381 464 5.5E-26 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta DDI_RS04745 72857f661721b928366c902bb54cd052 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 8.5E-47 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DDI_RS04745 72857f661721b928366c902bb54cd052 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.669 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DDI_RS04745 72857f661721b928366c902bb54cd052 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 5 132 5.0E-48 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 Gene3D G3DSA:3.40.50.1370 1 147 1.5E-54 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 330 9.7E-53 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.2E-47 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 Gene3D G3DSA:3.40.50.1370 148 319 4.5E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 7.1E-133 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.225 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 SUPERFAMILY SSF53671 4 332 2.49E-98 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00760 dad6aa5391a5d5154b1d7737c9ee5f15 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS16935 ca092d5b8227274f1211b74c86f84c2d 333 SUPERFAMILY SSF53659 8 331 4.96E-112 T 28-03-2018 DDI_RS16935 ca092d5b8227274f1211b74c86f84c2d 333 Gene3D G3DSA:3.40.718.10 1 333 2.7E-132 T 28-03-2018 DDI_RS16935 ca092d5b8227274f1211b74c86f84c2d 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 37 324 3.1E-107 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 DDI_RS16935 ca092d5b8227274f1211b74c86f84c2d 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 328 35.106 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 DDI_RS16935 ca092d5b8227274f1211b74c86f84c2d 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 327 4.1E-130 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 DDI_RS13040 7683a49a70ede1ea26f68d8e43b0b7f5 344 SUPERFAMILY SSF81345 18 339 4.71E-66 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS13040 7683a49a70ede1ea26f68d8e43b0b7f5 344 Pfam PF01032 FecCD transport family 36 339 5.1E-79 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 DDI_RS13040 7683a49a70ede1ea26f68d8e43b0b7f5 344 Gene3D G3DSA:1.10.3470.10 20 344 6.5E-58 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Gene3D G3DSA:4.10.860.10 609 670 7.0E-20 T 28-03-2018 IPR001943 UVR domain GO:0005515 DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Gene3D G3DSA:3.40.50.300 415 589 1.1E-32 T 28-03-2018 DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 SUPERFAMILY SSF52540 3 415 2.59E-137 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 663 0.0 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Pfam PF02151 UvrB/uvrC motif 631 665 8.0E-9 T 28-03-2018 IPR001943 UVR domain GO:0005515 DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Gene3D G3DSA:3.40.50.300 230 412 2.3E-8 T 28-03-2018 DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Gene3D G3DSA:3.40.50.300 10 220 2.8E-23 T 28-03-2018 DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 SMART SM00487 9 426 3.5E-26 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Pfam PF00271 Helicase conserved C-terminal domain 435 544 1.4E-17 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 665 43.989 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Pfam PF12344 Ultra-violet resistance protein B 552 593 5.3E-22 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 SUPERFAMILY SSF52540 459 584 6.71E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 SUPERFAMILY SSF52540 37 82 6.71E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 SUPERFAMILY SSF46600 619 666 1.1E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 SMART SM00490 460 546 8.9E-20 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS07160 3539268703a0cca5e67bdc2d9f97d1a1 670 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 8.4E-9 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 Pfam PF08206 Ribonuclease B OB domain 87 144 3.8E-22 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 SMART SM00955 260 588 6.1E-179 T 28-03-2018 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 Gene3D G3DSA:2.40.50.140 638 723 9.7E-19 T 28-03-2018 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 Gene3D G3DSA:1.10.10.10 18 79 2.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 721 5.1E-268 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 Pfam PF00575 S1 RNA binding domain 639 720 4.7E-15 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 SUPERFAMILY SSF50249 67 147 8.23E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 Hamap MF_01895 Ribonuclease R [rnr]. 38 722 56.735 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 SMART SM00357 86 145 4.1E-15 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 SUPERFAMILY SSF50249 641 721 3.18E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 SUPERFAMILY SSF50249 223 639 3.66E-138 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 SMART SM00316 639 722 1.0E-10 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 Pfam PF08461 Ribonuclease R winged-helix domain 22 85 4.1E-19 T 28-03-2018 IPR013668 Ribonuclease R winged-helix domain DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 Pfam PF00773 RNB domain 260 587 7.2E-104 T 28-03-2018 DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 SUPERFAMILY SSF50249 138 237 1.05E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS15765 0198dc9a86373a341464b5ed9ddaa729 825 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 722 3.7E-276 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 150 164 - T 28-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 SUPERFAMILY SSF53807 3 521 1.7E-169 T 28-03-2018 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 87 94 - T 28-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 Gene3D G3DSA:3.40.50.1980 219 327 1.9E-27 T 28-03-2018 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 522 1.7E-249 T 28-03-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 Gene3D G3DSA:1.20.89.10 328 395 3.3E-25 T 28-03-2018 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 69 500 1.1E-120 T 28-03-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 Pfam PF11844 Domain of unknown function (DUF3364) 1 55 2.1E-21 T 28-03-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 Gene3D G3DSA:3.40.50.1980 69 206 1.3E-42 T 28-03-2018 DDI_RS17610 68bd11f7deed3c1eddd804a3043b6acc 522 Gene3D G3DSA:3.40.50.1980 396 510 1.8E-29 T 28-03-2018 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 3.9E-25 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 1.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 1.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 1.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 SMART SM00936 292 383 1.3E-32 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 SUPERFAMILY SSF69189 292 385 2.94E-25 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 SUPERFAMILY SSF56601 11 292 6.32E-78 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 Gene3D G3DSA:2.60.410.10 311 383 1.1E-18 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.2E-98 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DDI_RS04815 0cc494371ca5d0136660af039606bc4a 403 Gene3D G3DSA:3.40.710.10 32 310 1.3E-48 T 28-03-2018 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 SUPERFAMILY SSF47336 1136 1208 1.57E-18 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Pfam PF00975 Thioesterase domain 1230 1384 6.7E-21 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 ProSitePatterns PS00455 Putative AMP-binding domain signature. 376 387 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Gene3D G3DSA:3.40.50.980 220 381 1.5E-43 T 28-03-2018 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 249 661 1.4E-125 T 28-03-2018 IPR010071 Amino acid adenylation domain DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 SMART SM00823 Phosphopantetheine attachment site 1143 1212 1.2E-8 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 SUPERFAMILY SSF53474 1210 1477 3.48E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Gene3D G3DSA:3.40.50.1820 1217 1478 1.9E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 SUPERFAMILY SSF52777 26 191 2.05E-6 T 28-03-2018 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Pfam PF00550 Phosphopantetheine attachment site 1145 1208 1.1E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Gene3D G3DSA:2.30.38.10 544 627 2.3E-23 T 28-03-2018 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Gene3D G3DSA:3.40.50.980 382 539 1.2E-42 T 28-03-2018 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Pfam PF00501 AMP-binding enzyme 229 637 1.3E-98 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Gene3D G3DSA:1.10.1200.10 1147 1216 1.9E-20 T 28-03-2018 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 SUPERFAMILY SSF56801 1079 1154 6.02E-146 T 28-03-2018 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 SUPERFAMILY SSF56801 192 692 6.02E-146 T 28-03-2018 DDI_RS20710 b7d45c035f0b7a322e42255580feeab4 1488 Gene3D G3DSA:3.30.300.30 632 1146 2.5E-27 T 28-03-2018 DDI_RS12430 67e1cbb103ea3fa124f1b926028781d1 425 SUPERFAMILY SSF53756 1 396 2.9E-61 T 28-03-2018 DDI_RS12430 67e1cbb103ea3fa124f1b926028781d1 425 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 304 377 8.3E-6 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 DDI_RS12430 67e1cbb103ea3fa124f1b926028781d1 425 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 82 8.0E-10 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS12430 67e1cbb103ea3fa124f1b926028781d1 425 Gene3D G3DSA:3.40.50.2000 244 390 1.7E-23 T 28-03-2018 DDI_RS12430 67e1cbb103ea3fa124f1b926028781d1 425 Gene3D G3DSA:3.40.50.2000 1 243 4.5E-31 T 28-03-2018 DDI_RS08140 558a8207b954e789242682d47534737b 302 SUPERFAMILY SSF53850 88 292 3.08E-46 T 28-03-2018 DDI_RS08140 558a8207b954e789242682d47534737b 302 SUPERFAMILY SSF46785 5 110 2.36E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08140 558a8207b954e789242682d47534737b 302 Gene3D G3DSA:3.40.190.10 88 174 1.8E-13 T 28-03-2018 DDI_RS08140 558a8207b954e789242682d47534737b 302 Gene3D G3DSA:3.40.190.10 175 261 5.2E-26 T 28-03-2018 DDI_RS08140 558a8207b954e789242682d47534737b 302 Gene3D G3DSA:1.10.10.10 3 81 1.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08140 558a8207b954e789242682d47534737b 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.2E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS08140 558a8207b954e789242682d47534737b 302 Pfam PF03466 LysR substrate binding domain 87 290 9.4E-44 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.898 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 Gene3D G3DSA:1.20.58.180 216 294 1.4E-32 T 28-03-2018 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 300 5.2E-177 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 9.6E-151 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.0E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.0E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.0E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.0E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.0E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.0E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 SUPERFAMILY SSF55681 8 292 6.84E-135 T 28-03-2018 DDI_RS20545 87f9110ee14801750c2da24ba51e489c 304 Gene3D G3DSA:3.30.930.10 1 214 9.7E-88 T 28-03-2018 DDI_RS01495 779e5f932e3715f62b56e6b214e1940d 464 Pfam PF16116 Domain of unknown function (DUF4832) 298 447 1.3E-18 T 28-03-2018 IPR032267 Domain of unknown function DUF4832 DDI_RS01495 779e5f932e3715f62b56e6b214e1940d 464 Pfam PF02449 Beta-galactosidase 70 172 1.0E-4 T 28-03-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS01495 779e5f932e3715f62b56e6b214e1940d 464 Gene3D G3DSA:3.20.20.80 52 334 5.2E-13 T 28-03-2018 DDI_RS01495 779e5f932e3715f62b56e6b214e1940d 464 SUPERFAMILY SSF51445 33 252 7.24E-18 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 SUPERFAMILY SSF53681 26 127 5.43E-32 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 TIGRFAM TIGR00067 glut_race: glutamate racemase 26 267 9.9E-83 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 Gene3D G3DSA:3.40.50.1860 22 146 1.1E-28 T 28-03-2018 DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 202 212 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 Pfam PF01177 Asp/Glu/Hydantoin racemase 28 237 8.1E-28 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 Gene3D G3DSA:3.40.50.1860 147 268 1.3E-25 T 28-03-2018 DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 Hamap MF_00258 Glutamate racemase [murI]. 24 276 33.865 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 91 99 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS19015 ba8bd4cac131460d6b376f815b215662 290 SUPERFAMILY SSF53681 129 278 6.98E-32 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS10685 be78dbaf580e93750cf5d81ce8eed26d 67 Pfam PF05489 Phage Tail Protein X 1 57 2.7E-29 T 28-03-2018 IPR008861 Phage Tail Protein X-like DDI_RS01265 8ca5f27459aa0e25e9e7834826c5ecc9 239 SUPERFAMILY SSF56214 123 206 9.03E-15 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS01265 8ca5f27459aa0e25e9e7834826c5ecc9 239 PRINTS PR01399 Enterobactin synthetase component D signature 167 183 1.4E-15 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DDI_RS01265 8ca5f27459aa0e25e9e7834826c5ecc9 239 PRINTS PR01399 Enterobactin synthetase component D signature 58 78 1.4E-15 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DDI_RS01265 8ca5f27459aa0e25e9e7834826c5ecc9 239 PRINTS PR01399 Enterobactin synthetase component D signature 88 106 1.4E-15 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DDI_RS01265 8ca5f27459aa0e25e9e7834826c5ecc9 239 Gene3D G3DSA:3.90.470.20 26 133 5.9E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS01265 8ca5f27459aa0e25e9e7834826c5ecc9 239 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 124 205 2.8E-9 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS01265 8ca5f27459aa0e25e9e7834826c5ecc9 239 Gene3D G3DSA:3.90.470.20 134 214 1.3E-6 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS02730 1e916504ea324906cd571c8e5d7abd3e 79 SUPERFAMILY SSF54857 1 77 1.31E-21 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like DDI_RS02730 1e916504ea324906cd571c8e5d7abd3e 79 Pfam PF06183 DinI-like family 17 76 1.8E-22 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like DDI_RS02730 1e916504ea324906cd571c8e5d7abd3e 79 Gene3D G3DSA:3.30.910.10 1 76 7.0E-26 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 SUPERFAMILY SSF81653 175 275 1.31E-27 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 Gene3D G3DSA:3.40.1110.10 333 551 1.5E-36 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 SMART SM00831 49 122 1.2E-7 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 Gene3D G3DSA:1.20.1110.10 572 899 2.5E-54 T 28-03-2018 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 Pfam PF00689 Cation transporting ATPase, C-terminus 727 893 6.7E-14 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 43 903 0.0 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 378 384 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 857 878 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 752 765 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 702 717 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 289 305 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 772 788 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 306 325 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 720 731 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 807 828 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 PRINTS PR01836 Magnesium-transporting ATPase signature 410 423 5.5E-82 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 SUPERFAMILY SSF56784 500 743 4.53E-37 T 28-03-2018 IPR023214 HAD-like domain DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 SUPERFAMILY SSF56784 374 394 4.53E-37 T 28-03-2018 IPR023214 HAD-like domain DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 Pfam PF00690 Cation transporter/ATPase, N-terminus 53 117 5.9E-14 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 Pfam PF00122 E1-E2 ATPase 158 356 9.0E-43 T 28-03-2018 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 SUPERFAMILY SSF81665 53 160 1.83E-101 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 SUPERFAMILY SSF81665 277 370 1.83E-101 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 SUPERFAMILY SSF81665 693 901 1.83E-101 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 128 396 1.4E-36 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 611 733 6.4E-31 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 372 658 3.0E-18 T 28-03-2018 DDI_RS04150 1c47a262f761c822e15e7852166c12d7 903 Gene3D G3DSA:2.70.150.10 58 277 7.8E-45 T 28-03-2018 DDI_RS08200 3b1682775d404c61c5bd68cdf8ca6a4e 646 SUPERFAMILY SSF51338 69 124 4.94E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS08200 3b1682775d404c61c5bd68cdf8ca6a4e 646 SUPERFAMILY SSF51338 593 640 4.94E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS08200 3b1682775d404c61c5bd68cdf8ca6a4e 646 Gene3D G3DSA:3.20.20.140 132 572 2.4E-29 T 28-03-2018 DDI_RS08200 3b1682775d404c61c5bd68cdf8ca6a4e 646 Gene3D G3DSA:2.30.40.10 68 131 7.9E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS08200 3b1682775d404c61c5bd68cdf8ca6a4e 646 Pfam PF07969 Amidohydrolase family 120 641 3.5E-43 T 28-03-2018 IPR013108 Amidohydrolase 3 DDI_RS08200 3b1682775d404c61c5bd68cdf8ca6a4e 646 Gene3D G3DSA:2.30.40.10 573 645 1.2E-4 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS08200 3b1682775d404c61c5bd68cdf8ca6a4e 646 SUPERFAMILY SSF51556 123 144 2.85E-18 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS08200 3b1682775d404c61c5bd68cdf8ca6a4e 646 SUPERFAMILY SSF51556 278 594 2.85E-18 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 SUPERFAMILY SSF56235 5 529 7.52E-148 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 Pfam PF01019 Gamma-glutamyltranspeptidase 25 524 1.3E-131 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 271 1.5E-23 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 144 1.5E-23 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 223 239 1.5E-23 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 343 361 1.5E-23 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 367 385 1.5E-23 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 1.5E-23 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS15200 12d6177327f24aa8ec970fae645e07df 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 398 413 1.5E-23 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 DDI_RS04170 539ff8c2f4414e2a1612661b6e2a7113 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 130 1.1E-46 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 DDI_RS04170 539ff8c2f4414e2a1612661b6e2a7113 139 Gene3D G3DSA:1.10.940.10 1 138 1.1E-43 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DDI_RS04170 539ff8c2f4414e2a1612661b6e2a7113 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 24.119 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 DDI_RS04170 539ff8c2f4414e2a1612661b6e2a7113 139 Pfam PF01029 NusB family 7 129 1.1E-36 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DDI_RS04170 539ff8c2f4414e2a1612661b6e2a7113 139 SUPERFAMILY SSF48013 3 130 1.7E-43 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DDI_RS11450 9d0ee1f9984bad6b36b2552380ff5903 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 2.0E-21 T 28-03-2018 IPR007040 Ribosome modulation factor DDI_RS11450 9d0ee1f9984bad6b36b2552380ff5903 55 Pfam PF04957 Ribosome modulation factor 1 52 5.5E-31 T 28-03-2018 IPR007040 Ribosome modulation factor DDI_RS11450 9d0ee1f9984bad6b36b2552380ff5903 55 Gene3D G3DSA:1.10.10.620 3 53 3.2E-25 T 28-03-2018 DDI_RS11450 9d0ee1f9984bad6b36b2552380ff5903 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.202 T 28-03-2018 IPR007040 Ribosome modulation factor DDI_RS11880 ae3fa029b3ff9e39b6e42c612c57527c 155 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 3.0E-65 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 DDI_RS11880 ae3fa029b3ff9e39b6e42c612c57527c 155 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.2E-30 T 28-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain DDI_RS11880 ae3fa029b3ff9e39b6e42c612c57527c 155 Pfam PF06303 MatP N-terminal domain 2 85 3.4E-43 T 28-03-2018 IPR035087 MatP, N-terminal DDI_RS11880 ae3fa029b3ff9e39b6e42c612c57527c 155 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.664 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 DDI_RS11880 ae3fa029b3ff9e39b6e42c612c57527c 155 Gene3D G3DSA:1.10.1220.10 71 135 3.4E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS20440 9635dd5d2a50065b2b3be31e0f6b6c15 425 SUPERFAMILY SSF89796 7 425 5.1E-112 T 28-03-2018 IPR023606 CoA-transferase family III domain DDI_RS20440 9635dd5d2a50065b2b3be31e0f6b6c15 425 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 8 424 4.2E-213 T 28-03-2018 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 DDI_RS20440 9635dd5d2a50065b2b3be31e0f6b6c15 425 Pfam PF02515 CoA-transferase family III 9 402 4.9E-88 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 DDI_RS20440 9635dd5d2a50065b2b3be31e0f6b6c15 425 Gene3D G3DSA:3.40.50.10540 3 425 5.5E-110 T 28-03-2018 IPR023606 CoA-transferase family III domain DDI_RS20440 9635dd5d2a50065b2b3be31e0f6b6c15 425 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 5 425 60.524 T 28-03-2018 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 DDI_RS15705 4c13cd1d2135899e65881584f3b39f67 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 4 108 1.5E-20 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DDI_RS15705 4c13cd1d2135899e65881584f3b39f67 206 Gene3D G3DSA:3.10.50.40 90 206 1.5E-40 T 28-03-2018 DDI_RS15705 4c13cd1d2135899e65881584f3b39f67 206 SUPERFAMILY SSF54534 8 205 1.41E-53 T 28-03-2018 DDI_RS15705 4c13cd1d2135899e65881584f3b39f67 206 Gene3D G3DSA:1.10.287.460 1 89 1.1E-18 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DDI_RS15705 4c13cd1d2135899e65881584f3b39f67 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 5.7E-27 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 Gene3D G3DSA:3.90.1260.10 179 374 7.3E-57 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 2.0E-167 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 SUPERFAMILY SSF69864 190 433 1.83E-79 T 28-03-2018 DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 Gene3D G3DSA:1.10.287.400 378 436 5.6E-28 T 28-03-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 SUPERFAMILY SSF52402 3 185 3.26E-34 T 28-03-2018 DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 449 75.049 T 28-03-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 Pfam PF00764 Arginosuccinate synthase 16 410 1.3E-58 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 Gene3D G3DSA:3.40.50.620 2 178 5.6E-19 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS20685 93a2c77881beb1a56b394ad03e65eb12 449 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 1.8E-7 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 2.4E-253 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 SUPERFAMILY SSF53623 95 308 1.7E-49 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 58.155 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 SUPERFAMILY SSF51984 1 90 6.02E-24 T 28-03-2018 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.2E-20 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 Gene3D G3DSA:3.90.190.20 313 451 3.7E-24 T 28-03-2018 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 Gene3D G3DSA:3.40.50.720 1 90 5.1E-13 T 28-03-2018 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 Gene3D G3DSA:3.40.1190.10 91 312 4.7E-36 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 Pfam PF08245 Mur ligase middle domain 108 291 1.1E-17 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS17245 38c3bcea270eafb1ee9cdbe567039c85 460 SUPERFAMILY SSF53244 312 449 2.22E-33 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS07100 676fa86180755d5c69afa19c732be241 252 SUPERFAMILY SSF69572 4 249 2.22E-87 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDI_RS07100 676fa86180755d5c69afa19c732be241 252 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 4.7E-127 T 28-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 DDI_RS07100 676fa86180755d5c69afa19c732be241 252 Gene3D G3DSA:3.40.50.720 2 250 8.8E-80 T 28-03-2018 DDI_RS07100 676fa86180755d5c69afa19c732be241 252 Pfam PF00899 ThiF family 13 245 2.6E-65 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 SMART SM00962 254 455 1.2E-123 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 SMART SM00382 253 444 1.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 SUPERFAMILY SSF47364 155 233 9.29E-23 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 SUPERFAMILY SSF52540 251 454 5.76E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 183 454 1.7E-113 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 SMART SM00963 160 240 4.6E-25 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 Gene3D G3DSA:1.20.120.140 361 458 2.9E-23 T 28-03-2018 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 428 441 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 Gene3D G3DSA:1.20.120.140 147 230 4.8E-23 T 28-03-2018 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 Gene3D G3DSA:3.40.50.300 231 360 1.1E-25 T 28-03-2018 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 Pfam PF02881 SRP54-type protein, helical bundle domain 171 236 3.7E-14 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 Pfam PF00448 SRP54-type protein, GTPase domain 254 454 4.2E-78 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS19370 03e7cff90ad4d59f1311a0ba7ada1688 458 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 183 455 65.105 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DDI_RS21295 b403ef0210d5425daf7535360ac6507b 162 SMART SM00738 1 100 1.3E-34 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDI_RS21295 b403ef0210d5425daf7535360ac6507b 162 SUPERFAMILY SSF82679 2 98 1.09E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDI_RS21295 b403ef0210d5425daf7535360ac6507b 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 45.973 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 DDI_RS21295 b403ef0210d5425daf7535360ac6507b 162 Gene3D G3DSA:2.30.30.30 108 161 6.0E-4 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 DDI_RS21295 b403ef0210d5425daf7535360ac6507b 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 6.8E-62 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 DDI_RS21295 b403ef0210d5425daf7535360ac6507b 162 Gene3D G3DSA:3.30.70.940 1 100 1.5E-18 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDI_RS21295 b403ef0210d5425daf7535360ac6507b 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.1E-18 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 Gene3D G3DSA:3.40.190.10 112 196 7.4E-30 T 28-03-2018 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 Gene3D G3DSA:3.30.70.260 289 382 6.0E-25 T 28-03-2018 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 Pfam PF01817 Chorismate mutase type II 10 88 1.2E-17 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 Pfam PF00800 Prephenate dehydratase 105 286 2.2E-60 T 28-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 SUPERFAMILY SSF53850 104 290 4.02E-56 T 28-03-2018 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 2.6E-32 T 28-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 SUPERFAMILY SSF55021 279 376 3.43E-22 T 28-03-2018 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 SMART SM00830 10 90 1.3E-25 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 Gene3D G3DSA:1.20.59.10 1 111 1.1E-29 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 Gene3D G3DSA:3.40.190.10 197 273 4.6E-23 T 28-03-2018 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 PIRSF PIRSF001500 1 379 6.0E-140 T 28-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DDI_RS14720 b122e55c9cbe0cf75e5e7fb253e82f52 385 SUPERFAMILY SSF48600 5 92 7.88E-22 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.0E-20 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 3.9E-18 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Pfam PF08529 NusA N-terminal domain 4 123 3.9E-36 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Pfam PF13184 NusA-like KH domain 230 297 8.2E-28 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Gene3D G3DSA:2.40.50.140 129 198 1.9E-13 T 28-03-2018 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 SUPERFAMILY SSF47794 355 415 5.49E-16 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 SUPERFAMILY SSF50249 132 199 2.21E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.7E-11 T 28-03-2018 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Pfam PF14520 Helix-hairpin-helix domain 365 411 6.3E-5 T 28-03-2018 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 SUPERFAMILY SSF47794 430 492 1.88E-17 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Gene3D G3DSA:1.10.150.20 431 490 2.3E-16 T 28-03-2018 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 SMART SM00316 133 200 1.2E-8 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Gene3D G3DSA:3.30.300.20 278 348 1.7E-12 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 SUPERFAMILY SSF54814 201 278 2.75E-29 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Gene3D G3DSA:3.30.1480.10 1 128 1.6E-44 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 SUPERFAMILY SSF54814 279 343 3.62E-15 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.1E-129 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Gene3D G3DSA:1.10.150.20 352 421 9.6E-15 T 28-03-2018 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Gene3D G3DSA:3.30.300.20 199 276 7.3E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 SUPERFAMILY SSF69705 1 126 8.37E-41 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DDI_RS02140 440d5842b0c36ded74af68f2a3ed83d0 496 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.062 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DDI_RS01565 dfdff7d7eb938bc8a8af1e803490d651 171 Gene3D G3DSA:3.40.1410.10 2 164 2.3E-39 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS01565 dfdff7d7eb938bc8a8af1e803490d651 171 Pfam PF04345 Chorismate lyase 10 164 2.3E-31 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 DDI_RS01565 dfdff7d7eb938bc8a8af1e803490d651 171 SUPERFAMILY SSF64288 17 164 3.06E-42 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS01565 dfdff7d7eb938bc8a8af1e803490d651 171 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 164 24.722 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 DDI_RS20275 33409d0c50cd90b72d71df868337b8d5 88 Gene3D G3DSA:3.30.1190.10 33 87 7.6E-8 T 28-03-2018 DDI_RS20275 33409d0c50cd90b72d71df868337b8d5 88 Gene3D G3DSA:1.10.10.60 7 32 2.0E-5 T 28-03-2018 DDI_RS20275 33409d0c50cd90b72d71df868337b8d5 88 SUPERFAMILY SSF47413 7 73 8.45E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS20275 33409d0c50cd90b72d71df868337b8d5 88 SMART SM00530 12 67 2.0E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS20275 33409d0c50cd90b72d71df868337b8d5 88 Pfam PF01381 Helix-turn-helix 13 65 1.6E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 PRINTS PR01100 Shikimate kinase family signature 75 83 5.0E-29 T 28-03-2018 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 PRINTS PR01100 Shikimate kinase family signature 114 131 5.0E-29 T 28-03-2018 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 PRINTS PR01100 Shikimate kinase family signature 93 102 5.0E-29 T 28-03-2018 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 PRINTS PR01100 Shikimate kinase family signature 23 38 5.0E-29 T 28-03-2018 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 PRINTS PR01100 Shikimate kinase family signature 47 60 5.0E-29 T 28-03-2018 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 Hamap MF_00109 Shikimate kinase [aroK]. 20 187 29.545 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 ProSitePatterns PS01128 Shikimate kinase signature. 76 101 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 Pfam PF01202 Shikimate kinase 29 186 1.4E-56 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 Gene3D G3DSA:3.40.50.300 17 189 7.6E-37 T 28-03-2018 DDI_RS18380 77acea4d331aaa8e71003abb4ae556ad 189 SUPERFAMILY SSF52540 20 186 1.78E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10860 3a05994a20559a3b80809e3bbf2cc5dd 143 Gene3D G3DSA:3.20.20.150 65 139 3.9E-4 T 28-03-2018 DDI_RS13605 836dc52284a408639e31900e5f4fe2ce 209 Pfam PF04993 TfoX N-terminal domain 16 105 1.8E-24 T 28-03-2018 IPR007076 TfoX, N-terminal DDI_RS13605 836dc52284a408639e31900e5f4fe2ce 209 Gene3D G3DSA:1.10.150.20 118 195 4.8E-20 T 28-03-2018 DDI_RS13605 836dc52284a408639e31900e5f4fe2ce 209 Pfam PF04994 TfoX C-terminal domain 118 195 7.5E-26 T 28-03-2018 IPR007077 TfoX, C-terminal DDI_RS13605 836dc52284a408639e31900e5f4fe2ce 209 SUPERFAMILY SSF159894 15 107 1.31E-24 T 28-03-2018 DDI_RS13605 836dc52284a408639e31900e5f4fe2ce 209 Gene3D G3DSA:3.30.1460.30 7 108 2.6E-16 T 28-03-2018 DDI_RS13605 836dc52284a408639e31900e5f4fe2ce 209 PIRSF PIRSF028788 1 204 1.0E-66 T 28-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 SUPERFAMILY SSF50156 411 478 8.15E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 SMART SM00228 298 377 4.0E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 SMART SM00228 402 474 1.5E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 Gene3D G3DSA:2.30.42.10 290 393 1.2E-26 T 28-03-2018 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 SUPERFAMILY SSF50156 278 386 1.06E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 410 470 3.4E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 293 372 1.1E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 480 3.0E-156 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 Gene3D G3DSA:2.30.42.10 394 482 1.9E-15 T 28-03-2018 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 Gene3D G3DSA:2.40.10.10 28 166 1.8E-29 T 28-03-2018 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 Pfam PF13365 Trypsin-like peptidase domain 120 256 7.2E-30 T 28-03-2018 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 PRINTS PR00834 HtrA/DegQ protease family signature 249 266 2.2E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 2.2E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 2.2E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 PRINTS PR00834 HtrA/DegQ protease family signature 130 142 2.2E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 2.2E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 2.2E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 Gene3D G3DSA:2.40.10.10 167 284 1.4E-40 T 28-03-2018 DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 SUPERFAMILY SSF50494 117 304 1.35E-60 T 28-03-2018 IPR009003 Peptidase S1, PA clan DDI_RS14460 da381191cf8a961a760a9a28d4a3529e 482 SUPERFAMILY SSF50494 36 60 1.35E-60 T 28-03-2018 IPR009003 Peptidase S1, PA clan DDI_RS06525 4981ce05f60f230e939c8153eb76bf9a 294 Gene3D G3DSA:3.40.50.720 9 149 5.7E-16 T 28-03-2018 DDI_RS06525 4981ce05f60f230e939c8153eb76bf9a 294 Gene3D G3DSA:3.90.25.10 150 285 1.3E-6 T 28-03-2018 DDI_RS06525 4981ce05f60f230e939c8153eb76bf9a 294 SUPERFAMILY SSF51735 11 284 4.98E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS06525 4981ce05f60f230e939c8153eb76bf9a 294 Pfam PF13460 NAD(P)H-binding 18 183 4.1E-17 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 Pfam PF02203 Tar ligand binding domain homologue 5 167 1.8E-12 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 6.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 6.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 6.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 6.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 6.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 SUPERFAMILY SSF58104 237 515 1.83E-73 T 28-03-2018 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 482 9.2E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 Gene3D G3DSA:1.10.287.950 46 322 1.7E-21 T 28-03-2018 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 Gene3D G3DSA:1.10.287.950 323 518 2.2E-49 T 28-03-2018 DDI_RS17495 3d21fb6171edacb3b60e4ac2525d4c38 556 SMART SM00283 267 514 4.1E-90 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 Pfam PF00905 Penicillin binding protein transpeptidase domain 474 713 4.7E-25 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 69 795 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 Pfam PF00912 Transglycosylase 210 381 9.0E-55 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 Gene3D G3DSA:3.30.2060.10 113 199 2.3E-27 T 28-03-2018 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 80 1.9E-27 T 28-03-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 SUPERFAMILY SSF53955 197 404 1.46E-65 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 Gene3D G3DSA:1.10.3810.10 200 398 4.9E-61 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 SUPERFAMILY SSF56601 363 385 3.5E-109 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 SUPERFAMILY SSF56601 413 787 3.5E-109 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 Gene3D G3DSA:1.20.5.100 58 96 4.6E-15 T 28-03-2018 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 PIRSF PIRSF002799 41 832 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 Pfam PF14814 Bifunctional transglycosylase second domain 114 198 9.9E-29 T 28-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS14490 1c146d16a653dc68f14ae73269e28fd1 832 Gene3D G3DSA:3.40.710.10 403 797 5.0E-99 T 28-03-2018 DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 Pfam PF03466 LysR substrate binding domain 87 292 2.3E-37 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.3E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 Gene3D G3DSA:1.10.10.10 3 83 2.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 SUPERFAMILY SSF46785 5 88 5.24E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 Gene3D G3DSA:3.40.190.10 178 263 5.6E-21 T 28-03-2018 DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 SUPERFAMILY SSF53850 88 297 9.05E-41 T 28-03-2018 DDI_RS02295 fc22e39cf26f6b4f2bbb13043301ca8d 300 Gene3D G3DSA:3.40.190.10 89 177 2.3E-10 T 28-03-2018 DDI_RS04100 3cd3b111a09533944eab3aeb874f960e 439 Pfam PF05525 Branched-chain amino acid transport protein 7 428 1.1E-154 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DDI_RS04100 3cd3b111a09533944eab3aeb874f960e 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 3.1E-157 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DDI_RS17095 32f262607320cc6974de32b6bfecd79f 238 Pfam PF00072 Response regulator receiver domain 6 113 1.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS17095 32f262607320cc6974de32b6bfecd79f 238 Gene3D G3DSA:1.10.10.10 131 238 2.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17095 32f262607320cc6974de32b6bfecd79f 238 SUPERFAMILY SSF46894 136 234 2.44E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS17095 32f262607320cc6974de32b6bfecd79f 238 SMART SM00862 156 232 3.7E-14 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS17095 32f262607320cc6974de32b6bfecd79f 238 SMART SM00448 4 114 1.6E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS17095 32f262607320cc6974de32b6bfecd79f 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 9.9E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS17095 32f262607320cc6974de32b6bfecd79f 238 Gene3D G3DSA:3.40.50.2300 1 130 1.2E-31 T 28-03-2018 DDI_RS17095 32f262607320cc6974de32b6bfecd79f 238 SUPERFAMILY SSF52172 2 124 6.97E-36 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS15795 ad0b2117c24d2fee9352c7ebfc02ba10 244 Gene3D G3DSA:3.20.20.10 1 244 1.1E-71 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS15795 ad0b2117c24d2fee9352c7ebfc02ba10 244 PIRSF PIRSF004848 5 242 1.9E-75 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein DDI_RS15795 ad0b2117c24d2fee9352c7ebfc02ba10 244 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 10 237 1.3E-93 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein DDI_RS15795 ad0b2117c24d2fee9352c7ebfc02ba10 244 Pfam PF01168 Alanine racemase, N-terminal domain 14 237 1.3E-28 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS15795 ad0b2117c24d2fee9352c7ebfc02ba10 244 SUPERFAMILY SSF51419 5 235 7.72E-82 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS15795 ad0b2117c24d2fee9352c7ebfc02ba10 244 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 87 101 - T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein DDI_RS17145 d5c7d4f6d02eb8f11b26aa33ddfc389e 220 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.261 T 28-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDI_RS17145 d5c7d4f6d02eb8f11b26aa33ddfc389e 220 SUPERFAMILY SSF75445 127 198 8.76E-23 T 28-03-2018 DDI_RS17145 d5c7d4f6d02eb8f11b26aa33ddfc389e 220 SUPERFAMILY SSF100950 1 146 5.12E-48 T 28-03-2018 DDI_RS17145 d5c7d4f6d02eb8f11b26aa33ddfc389e 220 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 6.3E-59 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDI_RS17145 d5c7d4f6d02eb8f11b26aa33ddfc389e 220 Gene3D G3DSA:3.40.50.1360 1 137 8.0E-42 T 28-03-2018 DDI_RS17145 d5c7d4f6d02eb8f11b26aa33ddfc389e 220 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 2.6E-69 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDI_RS17145 d5c7d4f6d02eb8f11b26aa33ddfc389e 220 Gene3D G3DSA:3.30.70.260 138 196 1.7E-22 T 28-03-2018 DDI_RS04090 45a0785f190c42fec514a8401956f47b 326 Gene3D G3DSA:3.40.190.10 186 311 3.3E-21 T 28-03-2018 DDI_RS04090 45a0785f190c42fec514a8401956f47b 326 Gene3D G3DSA:3.40.190.10 29 160 3.9E-31 T 28-03-2018 DDI_RS04090 45a0785f190c42fec514a8401956f47b 326 SUPERFAMILY SSF53850 22 308 1.03E-66 T 28-03-2018 DDI_RS04090 45a0785f190c42fec514a8401956f47b 326 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 18 297 6.2E-67 T 28-03-2018 IPR011862 Phosphate binding protein GO:0006810 DDI_RS04090 45a0785f190c42fec514a8401956f47b 326 Pfam PF12849 PBP superfamily domain 22 277 1.0E-28 T 28-03-2018 IPR024370 PBP domain DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 Gene3D G3DSA:4.10.320.10 106 166 5.2E-17 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 178 406 1.9E-82 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 Pfam PF02817 e3 binding domain 114 147 3.0E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 SUPERFAMILY SSF51230 2 94 5.37E-24 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 SUPERFAMILY SSF47005 107 151 2.35E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 408 2.2E-187 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 Gene3D G3DSA:3.30.559.10 167 406 5.9E-92 T 28-03-2018 DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 Pfam PF00364 Biotin-requiring enzyme 5 76 3.1E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 SUPERFAMILY SSF52777 178 407 4.45E-90 T 28-03-2018 DDI_RS05120 771e2f79b3ec8c641712661a178ddd72 408 Gene3D G3DSA:3.90.1170.30 1 49 1.6E-14 T 28-03-2018 DDI_RS03140 893b8b70ced1d77e7c11c9b16b66a5bc 523 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 473 488 5.9E-7 T 28-03-2018 DDI_RS03140 893b8b70ced1d77e7c11c9b16b66a5bc 523 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 51 73 5.9E-7 T 28-03-2018 DDI_RS03140 893b8b70ced1d77e7c11c9b16b66a5bc 523 Gene3D G3DSA:3.90.700.10 306 455 3.4E-32 T 28-03-2018 DDI_RS03140 893b8b70ced1d77e7c11c9b16b66a5bc 523 SUPERFAMILY SSF51905 33 295 1.33E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS03140 893b8b70ced1d77e7c11c9b16b66a5bc 523 SUPERFAMILY SSF51905 456 518 1.33E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS03140 893b8b70ced1d77e7c11c9b16b66a5bc 523 Gene3D G3DSA:3.50.50.60 44 305 5.1E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS03140 893b8b70ced1d77e7c11c9b16b66a5bc 523 SUPERFAMILY SSF56425 299 457 6.98E-26 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS03140 893b8b70ced1d77e7c11c9b16b66a5bc 523 Pfam PF00890 FAD binding domain 51 492 3.1E-66 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS13115 a562b6ebcb541337b4c457ca161e78b9 283 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 122 9.1E-31 T 28-03-2018 IPR010627 Peptidase A24A, N-terminal DDI_RS13115 a562b6ebcb541337b4c457ca161e78b9 283 Pfam PF01478 Type IV leader peptidase family 137 244 1.3E-26 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 DDI_RS13115 a562b6ebcb541337b4c457ca161e78b9 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 225 240 7.1E-26 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial DDI_RS13115 a562b6ebcb541337b4c457ca161e78b9 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 202 212 7.1E-26 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial DDI_RS13115 a562b6ebcb541337b4c457ca161e78b9 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 213 224 7.1E-26 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial DDI_RS13115 a562b6ebcb541337b4c457ca161e78b9 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 145 162 7.1E-26 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial DDI_RS17260 c79d405b8a441773b395401da04c48ad 331 SUPERFAMILY SSF117892 190 227 5.1E-8 T 28-03-2018 IPR001107 Band 7 domain DDI_RS17260 c79d405b8a441773b395401da04c48ad 331 TIGRFAM TIGR01932 hflC: HflC protein 1 322 2.2E-136 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 DDI_RS17260 c79d405b8a441773b395401da04c48ad 331 PIRSF PIRSF005651 1 331 4.4E-102 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 DDI_RS17260 c79d405b8a441773b395401da04c48ad 331 SUPERFAMILY SSF117892 56 159 6.02E-17 T 28-03-2018 IPR001107 Band 7 domain DDI_RS17260 c79d405b8a441773b395401da04c48ad 331 Pfam PF01145 SPFH domain / Band 7 family 22 237 9.6E-34 T 28-03-2018 IPR001107 Band 7 domain DDI_RS17260 c79d405b8a441773b395401da04c48ad 331 SMART SM00244 18 221 8.2E-42 T 28-03-2018 IPR001107 Band 7 domain DDI_RS19410 ec3c6b55ae7a7b01ae723be4b52ad20f 407 SUPERFAMILY SSF103473 24 399 9.94E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS19410 ec3c6b55ae7a7b01ae723be4b52ad20f 407 Pfam PF07690 Major Facilitator Superfamily 31 285 2.0E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS19410 ec3c6b55ae7a7b01ae723be4b52ad20f 407 Gene3D G3DSA:1.20.1250.20 213 404 2.9E-17 T 28-03-2018 DDI_RS19410 ec3c6b55ae7a7b01ae723be4b52ad20f 407 Gene3D G3DSA:1.20.1250.20 13 210 1.4E-16 T 28-03-2018 DDI_RS18375 03c2b0815caec15388f0238aa8b3cba1 361 Gene3D G3DSA:3.40.50.1970 3 172 1.5E-48 T 28-03-2018 DDI_RS18375 03c2b0815caec15388f0238aa8b3cba1 361 Pfam PF01761 3-dehydroquinate synthase 67 325 9.4E-110 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DDI_RS18375 03c2b0815caec15388f0238aa8b3cba1 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.262 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DDI_RS18375 03c2b0815caec15388f0238aa8b3cba1 361 SUPERFAMILY SSF56796 4 356 8.11E-117 T 28-03-2018 DDI_RS18375 03c2b0815caec15388f0238aa8b3cba1 361 Gene3D G3DSA:1.20.1090.10 173 360 9.8E-69 T 28-03-2018 DDI_RS18375 03c2b0815caec15388f0238aa8b3cba1 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 2.9E-121 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DDI_RS18375 03c2b0815caec15388f0238aa8b3cba1 361 PIRSF PIRSF001455 6 358 1.5E-105 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DDI_RS00510 7231d83c7ae8b28ba3aafaeb3e3fc021 310 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 77 288 1.6E-96 T 28-03-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 DDI_RS00510 7231d83c7ae8b28ba3aafaeb3e3fc021 310 Pfam PF01618 MotA/TolQ/ExbB proton channel family 172 269 7.7E-34 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 DDI_RS19985 e959bade32eff8cee2102258db6c9717 263 ProSitePatterns PS00449 ATP synthase a subunit signature. 198 207 - T 28-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19985 e959bade32eff8cee2102258db6c9717 263 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 21 258 3.3E-42 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19985 e959bade32eff8cee2102258db6c9717 263 Pfam PF00119 ATP synthase A chain 31 257 1.6E-55 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19985 e959bade32eff8cee2102258db6c9717 263 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 263 16.106 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19985 e959bade32eff8cee2102258db6c9717 263 SUPERFAMILY SSF81336 80 257 1.14E-46 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19985 e959bade32eff8cee2102258db6c9717 263 Gene3D G3DSA:1.20.120.220 80 263 1.9E-51 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS12910 0ab3f7382a32d871d3433c7b05ecf331 209 Pfam PF14497 Glutathione S-transferase, C-terminal domain 117 196 8.1E-7 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal DDI_RS12910 0ab3f7382a32d871d3433c7b05ecf331 209 Gene3D G3DSA:3.40.30.10 1 96 5.3E-22 T 28-03-2018 DDI_RS12910 0ab3f7382a32d871d3433c7b05ecf331 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 8.3E-18 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS12910 0ab3f7382a32d871d3433c7b05ecf331 209 SUPERFAMILY SSF47616 80 202 2.65E-20 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS12910 0ab3f7382a32d871d3433c7b05ecf331 209 SUPERFAMILY SSF52833 3 78 5.61E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS12910 0ab3f7382a32d871d3433c7b05ecf331 209 Gene3D G3DSA:1.20.1050.10 97 207 3.1E-18 T 28-03-2018 DDI_RS04625 d95d91370a032ae48745fe80a66d6ef8 223 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 41 51 - T 28-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 DDI_RS04625 d95d91370a032ae48745fe80a66d6ef8 223 SUPERFAMILY SSF52266 40 217 5.34E-47 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS04625 d95d91370a032ae48745fe80a66d6ef8 223 Gene3D G3DSA:3.40.50.1110 37 223 3.7E-35 T 28-03-2018 DDI_RS04625 d95d91370a032ae48745fe80a66d6ef8 223 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 43 203 5.7E-22 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS14920 a0fbd09144596ca7b1b1220075edde04 563 Gene3D G3DSA:3.30.565.10 381 558 8.4E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS14920 a0fbd09144596ca7b1b1220075edde04 563 SUPERFAMILY SSF55874 424 556 1.83E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS14920 a0fbd09144596ca7b1b1220075edde04 563 Pfam PF13492 GAF domain 243 355 3.1E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS14920 a0fbd09144596ca7b1b1220075edde04 563 SUPERFAMILY SSF55781 243 357 3.22E-8 T 28-03-2018 IPR029016 GAF domain-like DDI_RS14920 a0fbd09144596ca7b1b1220075edde04 563 SMART SM00065 218 365 9.0E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS14920 a0fbd09144596ca7b1b1220075edde04 563 Pfam PF06580 Histidine kinase 371 448 6.5E-25 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DDI_RS14920 a0fbd09144596ca7b1b1220075edde04 563 Pfam PF07694 5TMR of 5TMR-LYT 28 196 5.9E-58 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DDI_RS14920 a0fbd09144596ca7b1b1220075edde04 563 Gene3D G3DSA:3.30.450.40 230 372 1.9E-6 T 28-03-2018 IPR029016 GAF domain-like DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 149 3.2E-24 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 50.52 T 28-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 Gene3D G3DSA:3.30.230.40 174 253 1.7E-32 T 28-03-2018 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 SUPERFAMILY SSF54211 167 251 1.52E-30 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 Gene3D G3DSA:3.40.50.1000 5 173 5.7E-22 T 28-03-2018 IPR023214 HAD-like domain DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 SUPERFAMILY SSF56784 5 158 2.8E-37 T 28-03-2018 IPR023214 HAD-like domain DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 163 2.4E-78 T 28-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.3E-65 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 144 1.5E-44 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 Gene3D G3DSA:3.30.230.40 255 355 2.6E-32 T 28-03-2018 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 SUPERFAMILY SSF54211 252 342 1.39E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 Pfam PF13242 HAD-hyrolase-like 103 146 3.5E-7 T 28-03-2018 DDI_RS08230 8a872c693165dc1e6012d6bd3aff6c2c 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.016 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 SUPERFAMILY SSF51905 3 187 9.9E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 SUPERFAMILY SSF51905 336 393 9.9E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 Gene3D G3DSA:2.40.30.10 187 268 1.0E-24 T 28-03-2018 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 Gene3D G3DSA:3.50.50.60 4 185 4.2E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 SUPERFAMILY SSF160996 189 337 1.14E-43 T 28-03-2018 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 Pfam PF03486 HI0933-like protein 4 391 1.5E-155 T 28-03-2018 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 Gene3D G3DSA:1.10.8.260 269 320 1.8E-15 T 28-03-2018 IPR023166 HI0933 insert-like domain DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 391 1.1E-128 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 1.5E-5 T 28-03-2018 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.5E-5 T 28-03-2018 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 1.5E-5 T 28-03-2018 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.5E-9 T 28-03-2018 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 163 2.5E-9 T 28-03-2018 DDI_RS19615 5d704bc5cf21e22cd8370ec7326485fa 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 2.5E-9 T 28-03-2018 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 Gene3D G3DSA:1.20.58.410 2 100 3.3E-19 T 28-03-2018 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 Pfam PF00472 RF-1 domain 216 321 2.1E-41 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 Gene3D G3DSA:3.30.160.20 209 291 9.4E-33 T 28-03-2018 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 SMART SM00937 63 178 3.2E-67 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 SUPERFAMILY SSF75620 12 353 1.96E-136 T 28-03-2018 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.878 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 Pfam PF03462 PCRF domain 12 203 7.5E-75 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 DDI_RS09610 1b3c5ee1a11cec138f2e2db168334f29 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 8.9E-173 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DDI_RS17355 d48a8afdd8e261b8a2550e451b1fd70a 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 101 273 6.6E-43 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DDI_RS17355 d48a8afdd8e261b8a2550e451b1fd70a 308 Gene3D G3DSA:3.40.50.720 1 117 4.9E-14 T 28-03-2018 DDI_RS17355 d48a8afdd8e261b8a2550e451b1fd70a 308 SUPERFAMILY SSF51735 93 274 3.58E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17355 d48a8afdd8e261b8a2550e451b1fd70a 308 Gene3D G3DSA:3.40.50.720 118 274 1.4E-39 T 28-03-2018 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 Pfam PF13183 4Fe-4S dicluster domain 576 687 7.6E-13 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 Gene3D G3DSA:3.20.20.150 755 914 0.22 T 28-03-2018 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 Pfam PF01565 FAD binding domain 52 192 7.0E-39 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 Gene3D G3DSA:3.30.465.10 107 304 5.0E-45 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 Gene3D G3DSA:3.30.43.10 7 106 1.8E-18 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 2.5E-60 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 SUPERFAMILY SSF55103 259 542 1.8E-51 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 SUPERFAMILY SSF46548 517 622 2.62E-8 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 SUPERFAMILY SSF46548 654 690 2.62E-8 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 Gene3D G3DSA:1.10.1060.10 545 703 1.3E-12 T 28-03-2018 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 SUPERFAMILY SSF56176 245 282 1.23E-54 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 SUPERFAMILY SSF56176 17 192 1.23E-54 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 DDI_RS11425 7f9af18f5df31e08a06f369354a1b89c 1019 Gene3D G3DSA:1.10.45.10 501 539 3.7E-10 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DDI_RS08160 f79d30bf5c51eb981b9e4df930e0c3ab 760 Pfam PF02901 Pyruvate formate lyase-like 26 614 8.0E-205 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 DDI_RS08160 f79d30bf5c51eb981b9e4df930e0c3ab 760 Pfam PF01228 Glycine radical 630 741 7.4E-43 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 DDI_RS08160 f79d30bf5c51eb981b9e4df930e0c3ab 760 SUPERFAMILY SSF51998 4 758 1.86E-291 T 28-03-2018 DDI_RS08160 f79d30bf5c51eb981b9e4df930e0c3ab 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DDI_RS08160 f79d30bf5c51eb981b9e4df930e0c3ab 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DDI_RS08160 f79d30bf5c51eb981b9e4df930e0c3ab 760 PIRSF PIRSF000379 8 760 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DDI_RS08160 f79d30bf5c51eb981b9e4df930e0c3ab 760 Gene3D G3DSA:3.20.70.20 2 760 1.6E-294 T 28-03-2018 DDI_RS21275 ad9b63c3b469aab354863884067e1bd0 190 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.4E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 DDI_RS21275 ad9b63c3b469aab354863884067e1bd0 190 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.4E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 DDI_RS21275 ad9b63c3b469aab354863884067e1bd0 190 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.4E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 DDI_RS21275 ad9b63c3b469aab354863884067e1bd0 190 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 2.6E-31 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DDI_RS21275 ad9b63c3b469aab354863884067e1bd0 190 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 177 19.29 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DDI_RS19090 f2a0d88ae93a57ddc5b2b995e42e0b59 309 SUPERFAMILY SSF110997 235 304 1.1E-19 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS19090 f2a0d88ae93a57ddc5b2b995e42e0b59 309 Gene3D G3DSA:3.30.70.1070 231 304 4.4E-16 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS19090 f2a0d88ae93a57ddc5b2b995e42e0b59 309 Pfam PF05036 Sporulation related domain 235 302 3.0E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS19090 f2a0d88ae93a57ddc5b2b995e42e0b59 309 Hamap MF_02039 Cell division protein FtsN [ftsN]. 34 309 35.694 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 DDI_RS19090 f2a0d88ae93a57ddc5b2b995e42e0b59 309 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 303 1.4E-71 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 DDI_RS09855 eaab4168f70976d3151c7a3ee8c6d50c 517 SUPERFAMILY SSF56176 430 512 4.91E-16 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 DDI_RS09855 eaab4168f70976d3151c7a3ee8c6d50c 517 Pfam PF00571 CBS domain 367 416 0.002 T 28-03-2018 IPR000644 CBS domain DDI_RS09855 eaab4168f70976d3151c7a3ee8c6d50c 517 Pfam PF03741 Integral membrane protein TerC family 14 203 2.1E-49 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 DDI_RS09855 eaab4168f70976d3151c7a3ee8c6d50c 517 Gene3D G3DSA:3.30.465.10 425 511 8.7E-16 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 DDI_RS09855 eaab4168f70976d3151c7a3ee8c6d50c 517 Gene3D G3DSA:3.10.580.10 278 424 2.7E-24 T 28-03-2018 DDI_RS09855 eaab4168f70976d3151c7a3ee8c6d50c 517 SMART SM01091 428 509 1.4E-17 T 28-03-2018 IPR005170 Transporter-associated domain DDI_RS09855 eaab4168f70976d3151c7a3ee8c6d50c 517 Pfam PF03471 Transporter associated domain 430 508 2.0E-14 T 28-03-2018 IPR005170 Transporter-associated domain DDI_RS09855 eaab4168f70976d3151c7a3ee8c6d50c 517 SUPERFAMILY SSF54631 287 425 6.95E-24 T 28-03-2018 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 SMART SM00421 135 192 3.8E-24 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 SUPERFAMILY SSF46894 131 193 2.58E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 3.2E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 Pfam PF00072 Response regulator receiver domain 6 113 5.9E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 SMART SM00448 2 112 6.6E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 SUPERFAMILY SSF52172 1 125 9.39E-27 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 Gene3D G3DSA:1.10.10.10 123 195 2.0E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01705 fae65bd510c27a5f4346f12fb6a0dcf8 196 Gene3D G3DSA:3.40.50.2300 1 122 1.4E-25 T 28-03-2018 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SMART SM00796 796 1027 2.2E-112 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SUPERFAMILY SSF52440 1 112 3.74E-43 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SUPERFAMILY SSF51246 330 446 6.8E-32 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Gene3D G3DSA:2.40.50.100 1125 1196 5.6E-21 T 28-03-2018 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Gene3D G3DSA:3.40.50.20 1 123 5.9E-47 T 28-03-2018 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Gene3D G3DSA:3.30.470.20 208 450 1.0E-86 T 28-03-2018 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1193 0.0 T 28-03-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Pfam PF00364 Biotin-requiring enzyme 1132 1192 6.5E-18 T 28-03-2018 IPR000089 Biotin/lipoyl attachment DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SUPERFAMILY SSF160467 798 889 8.76E-19 T 28-03-2018 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Gene3D G3DSA:3.30.1360.40 780 878 7.4E-30 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 797 1018 1.8E-49 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 477 746 1.1E-84 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 318 1.1E-63 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 454 767 1.3E-93 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Gene3D G3DSA:2.40.100.10 884 1045 7.8E-50 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SUPERFAMILY SSF51230 1117 1193 1.31E-20 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SUPERFAMILY SSF50891 913 1043 2.96E-26 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SMART SM00878 336 445 4.0E-41 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Pfam PF02785 Biotin carboxylase C-terminal domain 336 444 2.1E-28 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SMART SM00797 476 763 2.2E-163 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.5E-41 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SUPERFAMILY SSF56059 83 350 1.04E-63 T 28-03-2018 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 Gene3D G3DSA:3.30.1490.20 124 207 7.5E-17 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS20560 85811e153da9bfe75d670375f5bd3672 1197 SUPERFAMILY SSF50891 627 753 6.07E-32 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS11070 6ea62d353b4777dcfc195d279ce399cc 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.3E-12 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS11070 6ea62d353b4777dcfc195d279ce399cc 296 Gene3D G3DSA:1.10.3720.10 19 285 1.6E-27 T 28-03-2018 DDI_RS11070 6ea62d353b4777dcfc195d279ce399cc 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 291 2.8E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS11070 6ea62d353b4777dcfc195d279ce399cc 296 SUPERFAMILY SSF161098 90 275 6.67E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12460 b0050149015ae0a21abaf7dd749a4ada 258 Gene3D G3DSA:3.40.190.10 16 136 4.6E-34 T 28-03-2018 DDI_RS12460 b0050149015ae0a21abaf7dd749a4ada 258 SUPERFAMILY SSF53850 1 251 2.11E-60 T 28-03-2018 DDI_RS12460 b0050149015ae0a21abaf7dd749a4ada 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 251 5.3E-54 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS12460 b0050149015ae0a21abaf7dd749a4ada 258 SMART SM00062 24 252 1.7E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS12460 b0050149015ae0a21abaf7dd749a4ada 258 Gene3D G3DSA:3.40.190.10 137 206 6.6E-14 T 28-03-2018 DDI_RS12460 b0050149015ae0a21abaf7dd749a4ada 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS16665 47e61b595302ede546995dfcfb036352 208 Pfam PF01121 Dephospho-CoA kinase 3 178 1.4E-73 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DDI_RS16665 47e61b595302ede546995dfcfb036352 208 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.271 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DDI_RS16665 47e61b595302ede546995dfcfb036352 208 SUPERFAMILY SSF52540 1 191 3.39E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16665 47e61b595302ede546995dfcfb036352 208 Gene3D G3DSA:3.40.50.300 1 208 3.9E-42 T 28-03-2018 DDI_RS16665 47e61b595302ede546995dfcfb036352 208 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 185 1.9E-61 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 SUPERFAMILY SSF56935 23 363 1.36E-59 T 28-03-2018 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 Gene3D G3DSA:2.40.160.10 11 363 1.3E-48 T 28-03-2018 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 317 334 4.0E-12 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 4.0E-12 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 56 67 4.0E-12 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 162 173 4.0E-12 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 Pfam PF00267 Gram-negative porin 28 363 7.6E-93 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 273 292 3.8E-48 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 160 182 3.8E-48 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 3.8E-48 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 107 129 3.8E-48 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS11540 020ccbc357b84b20fc650b46c6a4c94b 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 3.8E-48 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 254 9.3E-92 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 452 6.9E-62 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 498 7.1E-228 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 Gene3D G3DSA:3.30.420.40 1 250 4.3E-87 T 28-03-2018 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 SUPERFAMILY SSF53067 257 499 8.14E-86 T 28-03-2018 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 Gene3D G3DSA:3.30.420.40 251 503 2.7E-80 T 28-03-2018 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 Hamap MF_00186 Glycerol kinase [glpK]. 5 499 59.672 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 PIRSF PIRSF000538 5 503 3.4E-178 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDI_RS19125 25c7232cbb835c44137d3481eac79507 503 SUPERFAMILY SSF53067 6 257 1.59E-95 T 28-03-2018 DDI_RS00310 cd95e6f93f8c4736b94af58657df5cf4 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 2.8E-50 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 DDI_RS00310 cd95e6f93f8c4736b94af58657df5cf4 134 PIRSF PIRSF006318 1 133 1.0E-50 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 Pfam PF03466 LysR substrate binding domain 88 292 7.8E-45 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 SUPERFAMILY SSF46785 4 111 4.54E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 Gene3D G3DSA:3.40.190.10 178 263 1.5E-20 T 28-03-2018 DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 SUPERFAMILY SSF53850 89 293 3.8E-45 T 28-03-2018 DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 Gene3D G3DSA:1.10.10.10 3 84 4.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 Gene3D G3DSA:3.40.190.10 89 177 3.8E-16 T 28-03-2018 DDI_RS19710 b66ba6fda25afd51f7bf57f2da7c02c9 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19190 9176661c8d0ed30e8e6d47e60c4a5206 350 SUPERFAMILY SSF53335 84 325 1.05E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS19190 9176661c8d0ed30e8e6d47e60c4a5206 350 Pfam PF05050 Methyltransferase FkbM domain 145 317 3.3E-17 T 28-03-2018 IPR006342 Methyltransferase FkbM DDI_RS19190 9176661c8d0ed30e8e6d47e60c4a5206 350 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 142 283 1.6E-31 T 28-03-2018 IPR006342 Methyltransferase FkbM DDI_RS19190 9176661c8d0ed30e8e6d47e60c4a5206 350 Gene3D G3DSA:3.40.50.150 126 334 1.3E-34 T 28-03-2018 DDI_RS10500 8394fa01dba1903d56dcd6eefb5c9501 325 PIRSF PIRSF034367 1 325 1.4E-197 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 DDI_RS10500 8394fa01dba1903d56dcd6eefb5c9501 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 3.6E-184 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Gene3D G3DSA:3.90.550.10 494 797 0.0016 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2364 2790 3.5E-113 T 28-03-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 SUPERFAMILY SSF74650 1582 1837 2.73E-75 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Gene3D G3DSA:2.70.98.40 2070 2347 2.2E-90 T 28-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Gene3D G3DSA:2.70.98.40 1574 1848 1.3E-82 T 28-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Gene3D G3DSA:1.50.10.10 2379 2757 5.1E-82 T 28-03-2018 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 SMART SM01068 1561 1622 5.4E-17 T 28-03-2018 IPR009342 Putative carbohydrate binding domain DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 SMART SM01068 2069 2134 2.8E-31 T 28-03-2018 IPR009342 Putative carbohydrate binding domain DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Gene3D G3DSA:2.60.420.10 2781 2859 2.0E-17 T 28-03-2018 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 SUPERFAMILY SSF48208 2341 2858 1.43E-99 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 SUPERFAMILY SSF74650 2069 2335 1.69E-81 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Pfam PF06165 Glycosyltransferase family 36 1585 1834 2.4E-74 T 28-03-2018 IPR010383 Glycosyl hydrolase 94 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Pfam PF06165 Glycosyltransferase family 36 2092 2333 1.4E-76 T 28-03-2018 IPR010383 Glycosyl hydrolase 94 DDI_RS06255 53daf04c5accb00677d5f440d0df6be3 2861 Pfam PF10091 Putative glucoamylase 1324 1516 6.7E-14 T 28-03-2018 IPR019282 Domain of unknown function DUF2329 DDI_RS17280 4c15693fc4764314174a0dd5673c48de 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 299 7.7E-114 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DDI_RS17280 4c15693fc4764314174a0dd5673c48de 313 Gene3D G3DSA:3.40.50.300 8 202 5.9E-61 T 28-03-2018 DDI_RS17280 4c15693fc4764314174a0dd5673c48de 313 Pfam PF01715 IPP transferase 46 291 2.1E-84 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DDI_RS17280 4c15693fc4764314174a0dd5673c48de 313 Gene3D G3DSA:1.10.287.890 207 289 3.7E-23 T 28-03-2018 DDI_RS17280 4c15693fc4764314174a0dd5673c48de 313 SUPERFAMILY SSF52540 13 154 1.97E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17280 4c15693fc4764314174a0dd5673c48de 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.649 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 Gene3D G3DSA:1.20.1270.20 1 144 8.7E-34 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 Gene3D G3DSA:3.40.50.2030 235 375 1.1E-64 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 PIRSF PIRSF000076 1 550 1.4E-236 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 Gene3D G3DSA:3.40.50.2030 376 550 3.0E-59 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 6.4E-158 T 28-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.879 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 1.1E-235 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 SUPERFAMILY SSF56821 1 548 7.2E-188 T 28-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 DDI_RS08045 da6485bc0aa3c614ea06d6ef096fe979 550 Gene3D G3DSA:1.20.1270.20 150 232 2.7E-19 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DDI_RS12235 3298ded55f78e81fc6b01e371d372f71 162 Gene3D G3DSA:1.10.530.10 1 162 3.3E-44 T 28-03-2018 DDI_RS12235 3298ded55f78e81fc6b01e371d372f71 162 Hamap MF_04109 Endolysin. 1 162 36.644 T 28-03-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 DDI_RS12235 3298ded55f78e81fc6b01e371d372f71 162 Pfam PF00959 Phage lysozyme 31 148 1.6E-14 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 DDI_RS12235 3298ded55f78e81fc6b01e371d372f71 162 SUPERFAMILY SSF53955 3 160 4.67E-43 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS17575 84e79217856ea0898da88977af3b941f 457 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 55 62 - T 28-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 DDI_RS17575 84e79217856ea0898da88977af3b941f 457 Gene3D G3DSA:3.40.50.1980 287 367 3.2E-23 T 28-03-2018 DDI_RS17575 84e79217856ea0898da88977af3b941f 457 Gene3D G3DSA:3.40.50.1980 368 456 2.6E-16 T 28-03-2018 DDI_RS17575 84e79217856ea0898da88977af3b941f 457 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 122 136 - T 28-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 DDI_RS17575 84e79217856ea0898da88977af3b941f 457 Gene3D G3DSA:3.40.50.1980 186 286 1.0E-26 T 28-03-2018 DDI_RS17575 84e79217856ea0898da88977af3b941f 457 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 4 456 1.2E-206 T 28-03-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0006461|GO:0009399 DDI_RS17575 84e79217856ea0898da88977af3b941f 457 Gene3D G3DSA:3.40.50.1980 24 177 1.1E-46 T 28-03-2018 DDI_RS17575 84e79217856ea0898da88977af3b941f 457 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 37 442 1.3E-101 T 28-03-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 DDI_RS17575 84e79217856ea0898da88977af3b941f 457 SUPERFAMILY SSF53807 14 456 3.08E-129 T 28-03-2018 DDI_RS03485 19664cf979d8a4ddeade57740c2db9a1 419 Gene3D G3DSA:1.10.150.130 86 202 2.3E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS03485 19664cf979d8a4ddeade57740c2db9a1 419 SUPERFAMILY SSF56349 96 383 5.3E-48 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS03485 19664cf979d8a4ddeade57740c2db9a1 419 Pfam PF00589 Phage integrase family 207 382 2.8E-17 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS03485 19664cf979d8a4ddeade57740c2db9a1 419 Gene3D G3DSA:1.10.443.10 203 393 1.8E-19 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS03485 19664cf979d8a4ddeade57740c2db9a1 419 Pfam PF13356 Arm DNA-binding domain 3 86 1.6E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain DDI_RS01690 634361b454158e8313c3f7880df4864d 404 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 329 335 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS01690 634361b454158e8313c3f7880df4864d 404 SUPERFAMILY SSF53335 222 391 2.76E-21 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS01690 634361b454158e8313c3f7880df4864d 404 Gene3D G3DSA:3.40.50.150 218 404 4.9E-25 T 28-03-2018 DDI_RS01690 634361b454158e8313c3f7880df4864d 404 Pfam PF05175 Methyltransferase small domain 226 397 1.9E-51 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 DDI_RS01690 634361b454158e8313c3f7880df4864d 404 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 400 48.321 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS01690 634361b454158e8313c3f7880df4864d 404 PIRSF PIRSF037565 1 401 3.2E-151 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 3.0E-76 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.655 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 9.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 9.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 9.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 9.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 9.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 PIRSF PIRSF006160 1 162 5.8E-66 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 151 5.9E-62 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 SUPERFAMILY SSF63411 4 162 5.31E-67 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDI_RS14770 52229ac17f69904d7a8ac444425f3f08 171 Gene3D G3DSA:3.30.1360.80 3 161 1.9E-64 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS15285 4b1e9b5d49bfa549e9527c0e53328d5e 375 SUPERFAMILY SSF55315 131 209 8.71E-8 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like DDI_RS15285 4b1e9b5d49bfa549e9527c0e53328d5e 375 Pfam PF00588 SpoU rRNA Methylase family 229 366 2.5E-31 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDI_RS15285 4b1e9b5d49bfa549e9527c0e53328d5e 375 SMART SM00967 139 214 9.2E-6 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DDI_RS15285 4b1e9b5d49bfa549e9527c0e53328d5e 375 Gene3D G3DSA:3.30.1330.30 126 209 7.2E-7 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like DDI_RS15285 4b1e9b5d49bfa549e9527c0e53328d5e 375 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 140 211 2.6E-9 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DDI_RS15285 4b1e9b5d49bfa549e9527c0e53328d5e 375 PIRSF PIRSF006280 1 375 4.9E-157 T 28-03-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 DDI_RS15285 4b1e9b5d49bfa549e9527c0e53328d5e 375 SUPERFAMILY SSF75217 218 374 2.68E-39 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS15285 4b1e9b5d49bfa549e9527c0e53328d5e 375 Gene3D G3DSA:3.40.1280.10 226 375 5.6E-39 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 SMART SM00851 956 1042 1.0E-30 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 SUPERFAMILY SSF56059 128 401 5.48E-110 T 28-03-2018 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Gene3D G3DSA:3.40.50.20 539 655 4.3E-63 T 28-03-2018 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 1.4E-37 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.3E-77 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 SUPERFAMILY SSF52440 557 676 6.19E-50 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Gene3D G3DSA:3.40.50.20 4 109 2.1E-40 T 28-03-2018 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 SUPERFAMILY SSF48108 396 554 8.24E-53 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Pfam PF02142 MGS-like domain 957 1041 3.9E-18 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 SMART SM01096 424 547 3.8E-73 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.162 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Gene3D G3DSA:3.30.470.20 746 927 1.3E-43 T 28-03-2018 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Gene3D G3DSA:3.30.1490.20 656 745 8.1E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 SUPERFAMILY SSF52440 1 127 7.05E-50 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Gene3D G3DSA:3.40.50.1380 928 1055 5.1E-29 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 SUPERFAMILY SSF52335 938 1071 6.8E-35 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.1E-39 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Gene3D G3DSA:3.30.470.20 119 403 3.9E-66 T 28-03-2018 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Gene3D G3DSA:1.10.1030.10 404 538 1.1E-51 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 SUPERFAMILY SSF56059 674 934 1.26E-103 T 28-03-2018 DDI_RS16980 7115b17602f75f1a707e76c6ff1c500e 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.344 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS17165 d307f38c93cc69960fd12c0d4ab9b1cb 293 SUPERFAMILY SSF82689 181 278 2.35E-29 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DDI_RS17165 d307f38c93cc69960fd12c0d4ab9b1cb 293 Gene3D G3DSA:2.30.30.60 129 177 2.0E-13 T 28-03-2018 DDI_RS17165 d307f38c93cc69960fd12c0d4ab9b1cb 293 SUPERFAMILY SSF50182 114 178 5.89E-16 T 28-03-2018 IPR010920 LSM domain DDI_RS17165 d307f38c93cc69960fd12c0d4ab9b1cb 293 SUPERFAMILY SSF82861 28 112 1.14E-17 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DDI_RS17165 d307f38c93cc69960fd12c0d4ab9b1cb 293 Pfam PF05552 Conserved TM helix 16 64 8.6E-13 T 28-03-2018 IPR008910 Conserved TM helix DDI_RS17165 d307f38c93cc69960fd12c0d4ab9b1cb 293 Gene3D G3DSA:3.30.70.100 179 273 2.2E-25 T 28-03-2018 DDI_RS17165 d307f38c93cc69960fd12c0d4ab9b1cb 293 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 DDI_RS17165 d307f38c93cc69960fd12c0d4ab9b1cb 293 Pfam PF00924 Mechanosensitive ion channel 72 268 3.8E-52 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 49 641 2.2E-136 T 28-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 Pfam PF00263 Bacterial type II and III secretion system protein 474 638 7.7E-49 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 Pfam PF03958 Bacterial type II/III secretion system short domain 277 402 2.2E-12 T 28-03-2018 IPR005644 NolW-like DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 PRINTS PR00811 Bacterial general secretion pathway protein D signature 402 412 1.4E-36 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 PRINTS PR00811 Bacterial general secretion pathway protein D signature 602 620 1.4E-36 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 PRINTS PR00811 Bacterial general secretion pathway protein D signature 505 515 1.4E-36 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 PRINTS PR00811 Bacterial general secretion pathway protein D signature 470 494 1.4E-36 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 PRINTS PR00811 Bacterial general secretion pathway protein D signature 625 639 1.4E-36 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 PRINTS PR01032 Gene IV protein signature 495 518 1.9E-10 T 28-03-2018 DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 PRINTS PR01032 Gene IV protein signature 565 593 1.9E-10 T 28-03-2018 DDI_RS13740 89f7557ec6d6669e0bd3b57a072b4e05 695 PRINTS PR01032 Gene IV protein signature 618 640 1.9E-10 T 28-03-2018 DDI_RS16650 48aed5a6bea6e827a107882a1de19afa 473 Gene3D G3DSA:3.30.450.90 61 199 1.7E-42 T 28-03-2018 DDI_RS16650 48aed5a6bea6e827a107882a1de19afa 473 SUPERFAMILY SSF52540 84 468 1.37E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16650 48aed5a6bea6e827a107882a1de19afa 473 Gene3D G3DSA:3.40.50.300 200 473 3.6E-48 T 28-03-2018 DDI_RS16650 48aed5a6bea6e827a107882a1de19afa 473 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 294 308 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS16650 48aed5a6bea6e827a107882a1de19afa 473 Pfam PF00437 Type II/IV secretion system protein 105 366 7.0E-81 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS16650 48aed5a6bea6e827a107882a1de19afa 473 SMART SM00382 227 350 7.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04740 d8f8ce6ecf1202e597090fe83618ae5f 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.821 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS04740 d8f8ce6ecf1202e597090fe83618ae5f 237 Pfam PF01259 SAICAR synthetase 7 231 2.5E-59 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS04740 d8f8ce6ecf1202e597090fe83618ae5f 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS04740 d8f8ce6ecf1202e597090fe83618ae5f 237 Gene3D G3DSA:3.30.200.20 1 93 4.6E-25 T 28-03-2018 DDI_RS04740 d8f8ce6ecf1202e597090fe83618ae5f 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 6.2E-81 T 28-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 DDI_RS04740 d8f8ce6ecf1202e597090fe83618ae5f 237 Gene3D G3DSA:3.30.470.20 94 220 3.5E-44 T 28-03-2018 DDI_RS04740 d8f8ce6ecf1202e597090fe83618ae5f 237 SUPERFAMILY SSF56104 2 232 9.81E-76 T 28-03-2018 DDI_RS04740 d8f8ce6ecf1202e597090fe83618ae5f 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS20150 ff7eef4b9d959d24a05ee46fff1ab764 346 Gene3D G3DSA:3.40.190.10 194 346 1.5E-22 T 28-03-2018 DDI_RS20150 ff7eef4b9d959d24a05ee46fff1ab764 346 PIRSF PIRSF002756 2 338 6.3E-106 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 DDI_RS20150 ff7eef4b9d959d24a05ee46fff1ab764 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.7E-126 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 DDI_RS20150 ff7eef4b9d959d24a05ee46fff1ab764 346 Gene3D G3DSA:3.40.190.10 28 190 5.1E-33 T 28-03-2018 DDI_RS20150 ff7eef4b9d959d24a05ee46fff1ab764 346 SUPERFAMILY SSF53850 29 335 1.0E-94 T 28-03-2018 DDI_RS20150 ff7eef4b9d959d24a05ee46fff1ab764 346 Pfam PF12849 PBP superfamily domain 22 307 3.5E-59 T 28-03-2018 IPR024370 PBP domain DDI_RS16975 71a276cfb8ce9d2c4fca6ae91a1d631d 204 PIRSF PIRSF006324 1 204 2.5E-56 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS16975 71a276cfb8ce9d2c4fca6ae91a1d631d 204 Pfam PF01810 LysE type translocator 15 203 1.3E-35 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 Pfam PF02203 Tar ligand binding domain homologue 3 164 4.7E-10 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 SMART SM00283 269 516 1.1E-91 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 Gene3D G3DSA:1.20.120.30 25 183 1.3E-18 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 SMART SM00304 216 268 0.0062 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 4.9E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 4.9E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 4.9E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 4.9E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.9E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 Gene3D G3DSA:1.10.287.950 320 520 2.6E-46 T 28-03-2018 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 Gene3D G3DSA:1.10.287.950 218 319 1.4E-12 T 28-03-2018 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 SUPERFAMILY SSF58104 246 518 1.05E-70 T 28-03-2018 DDI_RS04995 b766f331fe3bd4d69b9dc1e99a2529e6 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 1.2E-55 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS05665 38006aad81c9303c0e670e6893536c13 286 SUPERFAMILY SSF53474 9 275 2.52E-63 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05665 38006aad81c9303c0e670e6893536c13 286 Gene3D G3DSA:3.40.50.1820 8 277 3.2E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05665 38006aad81c9303c0e670e6893536c13 286 Pfam PF07859 alpha/beta hydrolase fold 57 258 1.0E-55 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 DDI_RS00600 1e9601544432bd712bd62b3830d082d6 712 SUPERFAMILY SSF51998 121 687 6.1E-190 T 28-03-2018 DDI_RS00600 1e9601544432bd712bd62b3830d082d6 712 Pfam PF03477 ATP cone domain 4 89 2.6E-18 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DDI_RS00600 1e9601544432bd712bd62b3830d082d6 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 4.8E-178 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 DDI_RS00600 1e9601544432bd712bd62b3830d082d6 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DDI_RS00600 1e9601544432bd712bd62b3830d082d6 712 Gene3D G3DSA:3.20.70.20 121 687 9.5E-201 T 28-03-2018 DDI_RS00600 1e9601544432bd712bd62b3830d082d6 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 8.6E-200 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 DDI_RS04115 f86edba6cebba0332b8b1509e1006aab 201 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.7E-30 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 DDI_RS04115 f86edba6cebba0332b8b1509e1006aab 201 PIRSF PIRSF011489 1 195 1.9E-78 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 DDI_RS09875 82ccd9dc4c4dbd2b1f1278aa8f1dfcbf 152 PIRSF PIRSF020687 1 152 5.3E-63 T 28-03-2018 IPR009328 Protein of unknown function DUF986 DDI_RS09875 82ccd9dc4c4dbd2b1f1278aa8f1dfcbf 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 29.951 T 28-03-2018 IPR009328 Protein of unknown function DUF986 DDI_RS09875 82ccd9dc4c4dbd2b1f1278aa8f1dfcbf 152 Pfam PF06173 Protein of unknown function (DUF986) 4 151 1.9E-63 T 28-03-2018 IPR009328 Protein of unknown function DUF986 DDI_RS09875 82ccd9dc4c4dbd2b1f1278aa8f1dfcbf 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 4 144 4.0E-43 T 28-03-2018 IPR009328 Protein of unknown function DUF986 DDI_RS11800 2d178943946850b3346558cc4194dbeb 95 Gene3D G3DSA:3.30.70.100 1 93 2.0E-19 T 28-03-2018 DDI_RS11800 2d178943946850b3346558cc4194dbeb 95 SUPERFAMILY SSF54909 4 93 4.95E-25 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS11800 2d178943946850b3346558cc4194dbeb 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 77 2.8E-17 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 Gene3D G3DSA:3.10.20.30 267 367 2.0E-14 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 SUPERFAMILY SSF50800 147 263 1.46E-17 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 SUPERFAMILY SSF50800 4 50 1.46E-17 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 SUPERFAMILY SSF141673 4 132 2.22E-31 T 28-03-2018 DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 SUPERFAMILY SSF54292 284 365 1.04E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 297 360 2.2E-11 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 Pfam PF03473 MOSC domain 139 261 2.0E-27 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 Pfam PF03476 MOSC N-terminal beta barrel domain 3 117 1.8E-29 T 28-03-2018 IPR005303 MOSC, N-terminal beta barrel DDI_RS11480 e91134e67aa296d7fc0c7ea3fb827c5d 367 Gene3D G3DSA:2.40.33.20 2 266 1.1E-48 T 28-03-2018 DDI_RS08685 fd477bd65d8c9f4b615be8da412b9e79 343 Pfam PF03824 High-affinity nickel-transport protein 41 326 1.5E-86 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DDI_RS08685 fd477bd65d8c9f4b615be8da412b9e79 343 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 45 323 1.0E-117 T 28-03-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 DDI_RS11735 47621395c3fe155b7ce364bb65699af6 343 Gene3D G3DSA:3.30.160.60 302 336 7.1E-15 T 28-03-2018 DDI_RS11735 47621395c3fe155b7ce364bb65699af6 343 Pfam PF02618 YceG-like family 41 327 5.6E-80 T 28-03-2018 IPR003770 Endolytic murein transglycosylase DDI_RS11735 47621395c3fe155b7ce364bb65699af6 343 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 330 2.6E-114 T 28-03-2018 IPR003770 Endolytic murein transglycosylase DDI_RS11735 47621395c3fe155b7ce364bb65699af6 343 Gene3D G3DSA:3.30.160.60 73 107 3.3E-16 T 28-03-2018 DDI_RS11735 47621395c3fe155b7ce364bb65699af6 343 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 8 331 33.111 T 28-03-2018 IPR003770 Endolytic murein transglycosylase DDI_RS09155 c1618458f4ffe8abda28a7b73b8bc077 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 7.1E-59 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 DDI_RS09155 c1618458f4ffe8abda28a7b73b8bc077 196 SUPERFAMILY SSF52540 7 196 1.65E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09155 c1618458f4ffe8abda28a7b73b8bc077 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 26 196 3.5E-76 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 DDI_RS09155 c1618458f4ffe8abda28a7b73b8bc077 196 PIRSF PIRSF015617 1 196 4.6E-67 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 DDI_RS09155 c1618458f4ffe8abda28a7b73b8bc077 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 5.5E-7 T 28-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 DDI_RS09155 c1618458f4ffe8abda28a7b73b8bc077 196 Gene3D G3DSA:3.40.50.300 6 196 4.0E-69 T 28-03-2018 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 Gene3D G3DSA:3.10.150.10 124 247 2.6E-34 T 28-03-2018 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 SUPERFAMILY SSF55979 1 118 2.06E-27 T 28-03-2018 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 6.3E-40 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 6.8E-43 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.7E-111 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 PIRSF PIRSF000804 1 366 5.7E-117 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 SMART SM00480 17 362 1.5E-167 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 Gene3D G3DSA:3.10.150.10 1 123 2.6E-28 T 28-03-2018 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 SUPERFAMILY SSF55979 245 366 4.83E-37 T 28-03-2018 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 SUPERFAMILY SSF55979 125 244 8.22E-31 T 28-03-2018 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 Gene3D G3DSA:3.10.150.10 248 366 8.0E-24 T 28-03-2018 DDI_RS20335 72bf3ad6c974452857bd3a50680ab239 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 4.6E-40 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 Gene3D G3DSA:3.40.50.10380 5 160 7.1E-36 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 SUPERFAMILY SSF53659 430 754 1.07E-89 T 28-03-2018 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 SUPERFAMILY SSF51735 163 453 1.38E-86 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 9.9E-20 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 SMART SM00919 163 401 2.5E-142 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 PIRSF PIRSF036684 1 758 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 Gene3D G3DSA:3.40.50.10750 573 727 1.6E-48 T 28-03-2018 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 Gene3D G3DSA:3.40.50.720 161 448 1.4E-84 T 28-03-2018 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 SMART SM01274 18 151 3.7E-81 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.4E-96 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 SUPERFAMILY SSF53223 10 161 6.26E-53 T 28-03-2018 DDI_RS02960 66b500a84d3877414041d6fb041b4df0 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 6.8E-28 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DDI_RS12350 c88bda8ae1cec7258b35f0d207b7b9a9 420 Gene3D G3DSA:3.40.47.10 192 341 7.8E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12350 c88bda8ae1cec7258b35f0d207b7b9a9 420 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 275 404 7.2E-12 T 28-03-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 DDI_RS12350 c88bda8ae1cec7258b35f0d207b7b9a9 420 SUPERFAMILY SSF53901 3 182 2.59E-33 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12350 c88bda8ae1cec7258b35f0d207b7b9a9 420 SUPERFAMILY SSF53901 187 420 7.82E-58 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12350 c88bda8ae1cec7258b35f0d207b7b9a9 420 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 3 179 1.0E-9 T 28-03-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 DDI_RS12350 c88bda8ae1cec7258b35f0d207b7b9a9 420 Gene3D G3DSA:3.40.47.10 5 186 1.4E-11 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 Gene3D G3DSA:3.40.1380.20 322 470 1.7E-45 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 Gene3D G3DSA:3.20.20.60 160 321 2.8E-65 T 28-03-2018 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 SUPERFAMILY SSF51621 1 74 1.54E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 SUPERFAMILY SSF51621 156 339 1.54E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 9.9E-151 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 Gene3D G3DSA:3.20.20.60 1 109 2.0E-18 T 28-03-2018 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 SUPERFAMILY SSF52935 323 469 9.03E-36 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 Gene3D G3DSA:2.40.33.10 110 159 3.2E-22 T 28-03-2018 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 SUPERFAMILY SSF50800 70 167 2.27E-29 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 468 5.6E-187 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.4E-28 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.2E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.2E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.2E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.2E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.2E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.2E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS11370 e86873e906e9aaeeec35bc1ad993a1ad 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.2E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS05270 8f0ea1520c1eeb46b426aaef0f757ab4 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 18.813 T 28-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 DDI_RS05270 8f0ea1520c1eeb46b426aaef0f757ab4 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 46 3.5E-28 T 28-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Gene3D G3DSA:3.30.230.10 585 772 1.4E-70 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Gene3D G3DSA:1.10.4060.10 122 211 1.1E-30 T 28-03-2018 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 PIRSF PIRSF001174 1 775 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Gene3D G3DSA:2.30.130.40 1 118 1.2E-31 T 28-03-2018 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Gene3D G3DSA:1.10.8.60 491 584 5.8E-32 T 28-03-2018 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 SUPERFAMILY SSF88697 10 201 3.48E-52 T 28-03-2018 IPR015947 PUA-like domain DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 SUPERFAMILY SSF52540 313 588 5.89E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 4.2E-43 T 28-03-2018 IPR003111 Lon, substrate-binding domain DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 4.0E-98 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 28-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 SMART SM00382 348 492 4.9E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 SUPERFAMILY SSF54211 595 770 4.93E-58 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Gene3D G3DSA:3.40.50.300 313 490 4.3E-30 T 28-03-2018 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 SMART SM00464 10 202 3.3E-85 T 28-03-2018 IPR003111 Lon, substrate-binding domain DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.5E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 Hamap MF_01973 Lon protease [lon]. 11 772 72.088 T 28-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 3.2E-57 T 28-03-2018 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 3.2E-57 T 28-03-2018 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 3.2E-57 T 28-03-2018 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 3.2E-57 T 28-03-2018 DDI_RS04290 14aba4b804e3cf1a0da8a5e11e9f321f 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 3.2E-57 T 28-03-2018 DDI_RS20910 9126a2682455b518465a9d51e5226677 360 SUPERFAMILY SSF51556 11 359 1.85E-87 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS20910 9126a2682455b518465a9d51e5226677 360 ProSitePatterns PS00869 Renal dipeptidase active site. 141 163 - T 28-03-2018 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 DDI_RS20910 9126a2682455b518465a9d51e5226677 360 Gene3D G3DSA:3.20.20.140 6 278 1.1E-77 T 28-03-2018 DDI_RS20910 9126a2682455b518465a9d51e5226677 360 Gene3D G3DSA:3.20.20.140 279 360 1.1E-20 T 28-03-2018 DDI_RS20910 9126a2682455b518465a9d51e5226677 360 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 14 355 2.6E-96 T 28-03-2018 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PIRSF PIRSF000350 1 469 1.1E-86 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 3.2E-69 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 SUPERFAMILY SSF51905 9 382 1.16E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 9.0E-41 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 9.0E-41 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 9.0E-41 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 9.0E-41 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 9.0E-41 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 2.7E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 Gene3D G3DSA:3.30.390.30 341 463 3.1E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 9 461 2.0E-149 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 SUPERFAMILY SSF55424 344 467 8.76E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 Gene3D G3DSA:3.40.50.720 168 340 4.6E-28 T 28-03-2018 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 329 2.8E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS16595 bf45ae1a9c5acd5b9e82bf77f09bbb98 475 Gene3D G3DSA:3.50.50.60 1 167 3.1E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18025 ed557a6b51ec4b5cfcb8a9b797650c64 130 SUPERFAMILY SSF56047 5 129 1.02E-45 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18025 ed557a6b51ec4b5cfcb8a9b797650c64 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18025 ed557a6b51ec4b5cfcb8a9b797650c64 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.721 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18025 ed557a6b51ec4b5cfcb8a9b797650c64 130 Pfam PF00410 Ribosomal protein S8 5 129 2.9E-48 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18025 ed557a6b51ec4b5cfcb8a9b797650c64 130 Gene3D G3DSA:3.30.1370.30 1 66 3.4E-24 T 28-03-2018 DDI_RS18025 ed557a6b51ec4b5cfcb8a9b797650c64 130 Gene3D G3DSA:3.30.1490.10 74 129 2.9E-22 T 28-03-2018 DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 Gene3D G3DSA:3.30.70.20 14 42 0.0034 T 28-03-2018 DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 Gene3D G3DSA:3.30.70.20 113 152 1.8E-16 T 28-03-2018 DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.7E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 Gene3D G3DSA:3.30.70.20 43 112 2.4E-21 T 28-03-2018 DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 4.5E-22 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 Gene3D G3DSA:3.30.70.20 153 253 1.4E-22 T 28-03-2018 DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 4.3E-142 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 PIRSF PIRSF036298 1 300 1.7E-164 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 SUPERFAMILY SSF54862 26 272 2.2E-73 T 28-03-2018 DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS12560 b12d5d89a116024c2c6bb67396298b1e 300 Gene3D G3DSA:1.20.5.480 254 291 9.5E-23 T 28-03-2018 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 SUPERFAMILY SSF53597 1 160 2.23E-54 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.2E-13 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.2E-13 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.2E-13 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.2E-13 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 PIRSF PIRSF000194 1 160 8.4E-56 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 Pfam PF00186 Dihydrofolate reductase 3 159 2.0E-56 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DDI_RS16960 796f583a406cd9ca2f148bb2de0f206e 160 Gene3D G3DSA:3.40.430.10 1 160 2.8E-51 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 475 605 3.8E-38 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1469 1586 3.4E-39 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SUPERFAMILY SSF51735 2103 2312 3.41E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:1.10.1200.10 1091 1203 3.2E-17 T 28-03-2018 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:1.10.1200.10 950 1090 3.4E-14 T 28-03-2018 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:1.10.1200.10 25 139 6.2E-11 T 28-03-2018 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF08659 KR domain 2106 2286 1.6E-36 T 28-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:3.40.47.10 1476 1638 2.7E-57 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:3.40.47.10 483 661 1.0E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:3.40.47.10 214 479 1.2E-72 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:3.40.47.10 1209 1473 2.5E-80 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SUPERFAMILY SSF47336 1216 1228 6.28E-17 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SUPERFAMILY SSF47336 1089 1183 6.28E-17 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 221 467 9.9E-81 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1216 1461 1.1E-88 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:3.40.50.720 2102 2372 5.6E-29 T 28-03-2018 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2474 2489 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Gene3D G3DSA:1.10.1200.10 2417 2520 1.8E-9 T 28-03-2018 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SUPERFAMILY SSF53901 1213 1579 5.14E-92 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2106 2289 1.1E-24 T 28-03-2018 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM01294 957 1023 3.3E-30 T 28-03-2018 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM01294 1096 1162 7.9E-32 T 28-03-2018 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 380 396 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF00550 Phosphopantetheine attachment site 2458 2511 1.6E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF00550 Phosphopantetheine attachment site 958 1023 3.1E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF00550 Phosphopantetheine attachment site 61 125 9.4E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF00550 Phosphopantetheine attachment site 1097 1162 1.4E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1121 1136 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SUPERFAMILY SSF53901 219 595 3.79E-85 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SUPERFAMILY SSF47336 2446 2515 4.71E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM00825 Beta-ketoacyl synthase 223 663 4.4E-179 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM00825 Beta-ketoacyl synthase 1218 1640 2.0E-196 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM00823 Phosphopantetheine attachment site 59 130 1.3E-5 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM00823 Phosphopantetheine attachment site 956 1027 4.7E-13 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM00823 Phosphopantetheine attachment site 1094 1166 9.6E-16 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SMART SM00823 Phosphopantetheine attachment site 2449 2519 9.0E-4 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SUPERFAMILY SSF47336 955 1024 1.44E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 ProSitePatterns PS00012 Phosphopantetheine attachment site. 982 997 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 SUPERFAMILY SSF47336 55 142 8.24E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1589 1678 1.7E-11 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12325 af22ffffb371db12106093371bca69e5 2526 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 609 707 6.9E-13 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS10815 3a16d2d17df6f188edbb53fc3e40beac 228 Gene3D G3DSA:3.60.21.10 8 226 9.3E-38 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS10815 3a16d2d17df6f188edbb53fc3e40beac 228 SUPERFAMILY SSF56300 19 224 2.06E-44 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS10815 3a16d2d17df6f188edbb53fc3e40beac 228 Pfam PF00149 Calcineurin-like phosphoesterase 20 151 1.9E-13 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDI_RS10815 3a16d2d17df6f188edbb53fc3e40beac 228 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 78 83 - T 28-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DDI_RS06285 a98d3c460dc9a38e2dd95fd9fd1591cc 356 Gene3D G3DSA:1.10.287.470 115 161 1.7E-11 T 28-03-2018 DDI_RS06285 a98d3c460dc9a38e2dd95fd9fd1591cc 356 Gene3D G3DSA:2.40.50.100 58 114 4.3E-15 T 28-03-2018 DDI_RS06285 a98d3c460dc9a38e2dd95fd9fd1591cc 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 352 1.2E-67 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS06285 a98d3c460dc9a38e2dd95fd9fd1591cc 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 261 3.8E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS06285 a98d3c460dc9a38e2dd95fd9fd1591cc 356 Gene3D G3DSA:2.40.50.100 162 329 1.2E-5 T 28-03-2018 DDI_RS06285 a98d3c460dc9a38e2dd95fd9fd1591cc 356 SUPERFAMILY SSF111369 48 261 6.41E-23 T 28-03-2018 DDI_RS11455 402932603f8eb6915730b3cba5b42ee6 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 24 179 1.5E-39 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component DDI_RS11455 402932603f8eb6915730b3cba5b42ee6 187 Gene3D G3DSA:3.40.50.10610 12 187 3.0E-46 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component DDI_RS11455 402932603f8eb6915730b3cba5b42ee6 187 SUPERFAMILY SSF159594 23 184 1.54E-32 T 28-03-2018 DDI_RS11040 f09496e35fd7f59ba4e286228c98bd42 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 3.4E-37 T 28-03-2018 IPR014320 Phage shock protein, PspC DDI_RS11040 f09496e35fd7f59ba4e286228c98bd42 119 Pfam PF04024 PspC domain 7 64 2.4E-16 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal DDI_RS04710 80543c30643c25623bb4b07551c02656 118 SUPERFAMILY SSF52833 4 118 1.74E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS04710 80543c30643c25623bb4b07551c02656 118 Gene3D G3DSA:3.40.30.10 2 118 8.8E-36 T 28-03-2018 DDI_RS04710 80543c30643c25623bb4b07551c02656 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 118 6.8E-48 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 DDI_RS04710 80543c30643c25623bb4b07551c02656 118 Pfam PF03960 ArsC family 8 117 1.7E-21 T 28-03-2018 IPR006660 Arsenate reductase-like DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 1.9E-49 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 Gene3D G3DSA:3.40.50.2020 155 304 1.9E-43 T 28-03-2018 DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 311 49.881 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 SUPERFAMILY SSF53271 66 303 3.57E-68 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 3.1E-30 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 SMART SM01400 1 118 5.7E-76 T 28-03-2018 DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 Gene3D G3DSA:3.40.50.2020 1 154 1.5E-65 T 28-03-2018 DDI_RS09630 5ba248ac6b430c39ea42fb767bdf8fc0 312 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 5.4E-128 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DDI_RS12455 cc1211ca7dee2addfb2accf4e574d2f7 391 Gene3D G3DSA:3.90.1150.10 298 391 4.2E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS12455 cc1211ca7dee2addfb2accf4e574d2f7 391 SUPERFAMILY SSF53383 8 388 1.61E-96 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS12455 cc1211ca7dee2addfb2accf4e574d2f7 391 Pfam PF00155 Aminotransferase class I and II 32 381 1.2E-55 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS12455 cc1211ca7dee2addfb2accf4e574d2f7 391 Gene3D G3DSA:3.40.640.10 47 297 7.1E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS10865 c894afd1ccd655d45cc6f14f5efa5a7e 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 237 8.1E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS10865 c894afd1ccd655d45cc6f14f5efa5a7e 247 Gene3D G3DSA:3.40.50.2300 1 130 4.7E-27 T 28-03-2018 DDI_RS10865 c894afd1ccd655d45cc6f14f5efa5a7e 247 Gene3D G3DSA:1.10.10.10 131 244 4.0E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10865 c894afd1ccd655d45cc6f14f5efa5a7e 247 SMART SM00862 161 237 4.8E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS10865 c894afd1ccd655d45cc6f14f5efa5a7e 247 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS10865 c894afd1ccd655d45cc6f14f5efa5a7e 247 SMART SM00448 2 112 5.9E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS10865 c894afd1ccd655d45cc6f14f5efa5a7e 247 SUPERFAMILY SSF52172 1 125 3.27E-31 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS10865 c894afd1ccd655d45cc6f14f5efa5a7e 247 SUPERFAMILY SSF46894 143 238 1.19E-24 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS18185 a947ac9bdfde64419b5fd0fe0d66f689 264 SUPERFAMILY SSF56317 1 254 1.44E-63 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS18185 a947ac9bdfde64419b5fd0fe0d66f689 264 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DDI_RS18185 a947ac9bdfde64419b5fd0fe0d66f689 264 Gene3D G3DSA:3.60.110.10 1 258 2.4E-60 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS18185 a947ac9bdfde64419b5fd0fe0d66f689 264 Pfam PF00795 Carbon-nitrogen hydrolase 3 245 5.5E-36 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS01660 f28cc1ed0ab5ed899e953459fbc6bbdd 472 Pfam PF02614 Glucuronate isomerase 1 465 1.4E-226 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 DDI_RS01660 f28cc1ed0ab5ed899e953459fbc6bbdd 472 Gene3D G3DSA:3.20.20.140 3 89 2.5E-27 T 28-03-2018 DDI_RS01660 f28cc1ed0ab5ed899e953459fbc6bbdd 472 SUPERFAMILY SSF51556 3 466 1.53E-181 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS01660 f28cc1ed0ab5ed899e953459fbc6bbdd 472 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.726 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 DDI_RS01660 f28cc1ed0ab5ed899e953459fbc6bbdd 472 Gene3D G3DSA:3.20.20.140 90 467 8.6E-152 T 28-03-2018 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 SMART SM00448 5 118 4.5E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 4.2E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 4.2E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 4.2E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 SMART SM00421 149 206 1.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 SUPERFAMILY SSF46894 140 212 2.14E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 8.5E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 Gene3D G3DSA:3.40.50.2300 4 129 2.2E-33 T 28-03-2018 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 Pfam PF00072 Response regulator receiver domain 8 119 1.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 SUPERFAMILY SSF52172 5 135 4.84E-32 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS10320 cf3092b113ed9837ef939c093b279bef 213 Gene3D G3DSA:1.10.10.10 130 213 2.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10830 896e961a4fe21738820c7394d7783d39 282 SMART SM00382 35 235 3.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS10830 896e961a4fe21738820c7394d7783d39 282 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS10830 896e961a4fe21738820c7394d7783d39 282 SUPERFAMILY SSF52540 8 245 2.79E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10830 896e961a4fe21738820c7394d7783d39 282 Gene3D G3DSA:3.40.50.300 6 282 7.0E-51 T 28-03-2018 DDI_RS10830 896e961a4fe21738820c7394d7783d39 282 Pfam PF00005 ABC transporter 31 184 1.9E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 28-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 28-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 SUPERFAMILY SSF81333 3 77 6.93E-18 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS19990 7b9971ed6c88455d372e2e1c8ecf572d 79 Gene3D G3DSA:1.20.20.10 1 79 7.5E-16 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DDI_RS18625 36f3e8a024bc646c10936ba83428b3af 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 DDI_RS18625 36f3e8a024bc646c10936ba83428b3af 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 28-03-2018 DDI_RS18625 36f3e8a024bc646c10936ba83428b3af 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 2.9E-64 T 28-03-2018 IPR000150 Cof family GO:0016787 DDI_RS18625 36f3e8a024bc646c10936ba83428b3af 269 SUPERFAMILY SSF56784 1 263 3.61E-67 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18625 36f3e8a024bc646c10936ba83428b3af 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 2.9E-59 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18625 36f3e8a024bc646c10936ba83428b3af 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 231 8.7E-25 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DDI_RS18625 36f3e8a024bc646c10936ba83428b3af 269 Gene3D G3DSA:3.40.50.1000 2 265 2.3E-33 T 28-03-2018 IPR023214 HAD-like domain DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 28-03-2018 IPR018215 ClpP, Ser active site DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 Gene3D G3DSA:3.90.226.10 15 207 1.1E-48 T 28-03-2018 DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 45.064 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 4.1E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 4.1E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 4.1E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 4.1E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 4.1E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 SUPERFAMILY SSF52096 23 206 4.25E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 1.1E-110 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 28-03-2018 IPR033135 ClpP, histidine active site DDI_RS04280 9dc946d8fc1e01b1afc7b147cd489152 207 Pfam PF00574 Clp protease 25 205 1.9E-90 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 655 74.843 T 28-03-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 Gene3D G3DSA:3.20.20.80 133 570 7.2E-108 T 28-03-2018 DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 13 95 2.0E-15 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 SUPERFAMILY SSF81296 7 143 7.8E-40 T 28-03-2018 IPR014756 Immunoglobulin E-set DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 SMART SM00642 154 556 3.4E-8 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 SUPERFAMILY SSF51445 129 461 7.57E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 SUPERFAMILY SSF51445 490 565 7.57E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 Pfam PF00128 Alpha amylase, catalytic domain 184 356 7.0E-8 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 Gene3D G3DSA:2.60.40.1180 571 655 1.2E-10 T 28-03-2018 DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 653 5.9E-285 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 SUPERFAMILY SSF51011 571 627 2.01E-5 T 28-03-2018 DDI_RS18540 a8f8fe06bb192fff351c225c70e2cbd8 660 Gene3D G3DSA:2.60.40.10 1 132 1.2E-36 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS06180 5189be6a91c166a4f93940c3a2c5b0c1 136 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 128 1.9E-51 T 28-03-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system DDI_RS06180 5189be6a91c166a4f93940c3a2c5b0c1 136 Gene3D G3DSA:3.30.2390.10 2 76 1.3E-21 T 28-03-2018 IPR035069 TTHA1013/TTHA0281-like DDI_RS06180 5189be6a91c166a4f93940c3a2c5b0c1 136 SUPERFAMILY SSF143100 1 64 6.02E-21 T 28-03-2018 IPR035069 TTHA1013/TTHA0281-like DDI_RS06180 5189be6a91c166a4f93940c3a2c5b0c1 136 Gene3D G3DSA:1.10.1220.10 93 133 1.1E-8 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 424 51.505 T 28-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 212 222 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 Gene3D G3DSA:2.160.10.10 323 408 2.4E-9 T 28-03-2018 DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 398 3.2E-153 T 28-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 114 122 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 SUPERFAMILY SSF51161 314 412 2.5E-17 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 Gene3D G3DSA:3.90.550.10 20 322 9.3E-63 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 Pfam PF00483 Nucleotidyl transferase 22 292 2.6E-67 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 SUPERFAMILY SSF53448 20 295 1.93E-74 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS18535 5aee6425b21472ede2fffeb4965950cb 428 SUPERFAMILY SSF53448 345 360 1.93E-74 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS08155 ea9991448ed456ef8485a74a71784f87 246 Pfam PF13353 4Fe-4S single cluster domain 16 125 2.1E-17 T 28-03-2018 DDI_RS08155 ea9991448ed456ef8485a74a71784f87 246 PIRSF PIRSF000371 1 47 3.7E-10 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DDI_RS08155 ea9991448ed456ef8485a74a71784f87 246 PIRSF PIRSF000371 44 246 1.6E-43 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DDI_RS08155 ea9991448ed456ef8485a74a71784f87 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DDI_RS08155 ea9991448ed456ef8485a74a71784f87 246 SUPERFAMILY SSF102114 23 215 2.35E-21 T 28-03-2018 DDI_RS08155 ea9991448ed456ef8485a74a71784f87 246 Gene3D G3DSA:3.80.30.10 68 245 8.1E-36 T 28-03-2018 DDI_RS08155 ea9991448ed456ef8485a74a71784f87 246 Pfam PF04055 Radical SAM superfamily 24 178 1.2E-28 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS08155 ea9991448ed456ef8485a74a71784f87 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 7.3E-103 T 28-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 DDI_RS09900 02e5ed29a049da3e4f7197f63a6660c4 285 Pfam PF03881 Fructosamine kinase 1 284 6.6E-114 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 DDI_RS09900 02e5ed29a049da3e4f7197f63a6660c4 285 PIRSF PIRSF006221 1 285 6.2E-90 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 DDI_RS09900 02e5ed29a049da3e4f7197f63a6660c4 285 Gene3D G3DSA:3.30.200.20 1 91 7.0E-20 T 28-03-2018 DDI_RS09900 02e5ed29a049da3e4f7197f63a6660c4 285 Gene3D G3DSA:3.90.1200.10 94 283 2.4E-17 T 28-03-2018 DDI_RS09900 02e5ed29a049da3e4f7197f63a6660c4 285 SUPERFAMILY SSF56112 3 280 4.27E-45 T 28-03-2018 IPR011009 Protein kinase-like domain DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 Gene3D G3DSA:3.40.190.10 94 179 2.6E-13 T 28-03-2018 DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.5E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 Pfam PF03466 LysR substrate binding domain 91 295 8.3E-28 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 SUPERFAMILY SSF53850 93 298 9.77E-31 T 28-03-2018 DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 SUPERFAMILY SSF46785 9 114 3.18E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 Gene3D G3DSA:1.10.10.10 7 93 6.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17715 f1c71c35aea14755fbecdad814745798 310 Gene3D G3DSA:3.40.190.10 180 268 1.2E-16 T 28-03-2018 DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 Pfam PF00271 Helicase conserved C-terminal domain 204 327 5.6E-15 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 Pfam PF08482 ATP-dependent helicase C-terminal 676 808 2.1E-51 T 28-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 5 820 0.0 T 28-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 SMART SM00490 226 328 1.3E-17 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 Pfam PF04408 Helicase associated domain (HA2) 389 458 2.0E-10 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 Pfam PF00270 DEAD/DEAH box helicase 12 162 7.2E-9 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 PIRSF PIRSF005496 1 822 0.0 T 28-03-2018 DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 SUPERFAMILY SSF52540 15 338 6.35E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 SMART SM00487 2 189 1.3E-17 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 Gene3D G3DSA:3.40.50.300 3 162 2.8E-24 T 28-03-2018 DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 Gene3D G3DSA:3.40.50.300 180 349 1.6E-42 T 28-03-2018 DDI_RS14495 aa5a639ac8497db80f26396143c9a07e 823 SMART SM00847 388 478 1.7E-6 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 DDI_RS14290 8d6cf8b58de40b2693b1ea438c070913 316 Gene3D G3DSA:2.50.20.10 21 224 4.6E-14 T 28-03-2018 DDI_RS14290 8d6cf8b58de40b2693b1ea438c070913 316 Pfam PF17188 MucB/RseB C-terminal domain 218 310 1.1E-26 T 28-03-2018 IPR033436 MucB/RseB, C-terminal DDI_RS14290 8d6cf8b58de40b2693b1ea438c070913 316 PIRSF PIRSF005427 1 315 9.5E-81 T 28-03-2018 IPR005588 MucB/RseB DDI_RS14290 8d6cf8b58de40b2693b1ea438c070913 316 Pfam PF03888 MucB/RseB N-terminal domain 27 194 7.7E-57 T 28-03-2018 IPR033434 MucB/RseB, N-terminal DDI_RS01685 7851295d813cf76816517803b6da9ee7 317 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 313 1.4E-120 T 28-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 DDI_RS01685 7851295d813cf76816517803b6da9ee7 317 Pfam PF03741 Integral membrane protein TerC family 80 282 1.5E-55 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 Gene3D G3DSA:1.20.200.10 108 375 4.0E-93 T 28-03-2018 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 Pfam PF00206 Lyase 6 301 1.6E-96 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal DDI_RS21245 233b686465276c092b33c7c20b284e40 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 9.0E-25 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 SUPERFAMILY SSF48557 3 456 1.88E-141 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 7.6E-69 T 28-03-2018 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 7.6E-69 T 28-03-2018 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 7.6E-69 T 28-03-2018 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 7.6E-69 T 28-03-2018 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 7.6E-69 T 28-03-2018 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 7.6E-69 T 28-03-2018 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.6E-209 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 Gene3D G3DSA:1.10.40.30 376 433 1.8E-26 T 28-03-2018 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 Gene3D G3DSA:1.10.275.10 2 107 6.3E-32 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal DDI_RS21245 233b686465276c092b33c7c20b284e40 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDI_RS21245 233b686465276c092b33c7c20b284e40 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.977 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 6.1E-5 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 7.4E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 7.4E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 7.4E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 7.4E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 7.4E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 SUPERFAMILY SSF52343 100 231 5.24E-36 T 28-03-2018 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 Gene3D G3DSA:2.40.30.10 2 98 1.2E-16 T 28-03-2018 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 SUPERFAMILY SSF63380 3 97 1.09E-20 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 2.3E-21 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDI_RS21305 8c0d4644acf83ed951cfa07301a02e40 233 Gene3D G3DSA:3.40.50.80 99 233 1.6E-23 T 28-03-2018 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.5E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.078 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 Gene3D G3DSA:4.10.520.10 1 99 3.0E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 SUPERFAMILY SSF47729 3 93 1.34E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 9.9E-55 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DDI_RS09990 282d1b7b28aac2a13e503abf52b7cc82 99 SMART SM00411 3 92 2.5E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS14325 2295c7fb0850be941e2969144b4c25ca 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.23 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDI_RS14325 2295c7fb0850be941e2969144b4c25ca 228 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 1.5E-25 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDI_RS14325 2295c7fb0850be941e2969144b4c25ca 228 SMART SM00987 49 210 9.0E-41 T 28-03-2018 DDI_RS14325 2295c7fb0850be941e2969144b4c25ca 228 SUPERFAMILY SSF52141 4 221 1.46E-95 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDI_RS14325 2295c7fb0850be941e2969144b4c25ca 228 Gene3D G3DSA:3.40.470.10 1 227 3.6E-105 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDI_RS14325 2295c7fb0850be941e2969144b4c25ca 228 SMART SM00986 49 210 9.0E-41 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDI_RS14325 2295c7fb0850be941e2969144b4c25ca 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 2.0E-87 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDI_RS20480 fb82bd67a21d536ac947690f12d06495 372 Gene3D G3DSA:1.20.1290.10 13 155 6.6E-10 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DDI_RS20480 fb82bd67a21d536ac947690f12d06495 372 Gene3D G3DSA:1.20.1290.10 205 368 3.8E-28 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DDI_RS20480 fb82bd67a21d536ac947690f12d06495 372 Pfam PF02627 Carboxymuconolactone decarboxylase family 232 294 1.0E-12 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DDI_RS20480 fb82bd67a21d536ac947690f12d06495 372 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 196 367 4.2E-44 T 28-03-2018 IPR010195 Uncharacterised peroxidase-related DDI_RS20480 fb82bd67a21d536ac947690f12d06495 372 TIGRFAM TIGR04030 perox_Avi_7169: alkylhydroperoxidase domain protein, Avi_7169 family 181 367 6.2E-90 T 28-03-2018 IPR023923 Alkylhydroperoxidase domain-containing protein, Avi7169 DDI_RS20480 fb82bd67a21d536ac947690f12d06495 372 SUPERFAMILY SSF69118 190 367 1.44E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DDI_RS20480 fb82bd67a21d536ac947690f12d06495 372 SUPERFAMILY SSF69118 6 151 4.76E-18 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DDI_RS20480 fb82bd67a21d536ac947690f12d06495 372 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 248 292 5.2E-11 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DDI_RS16440 d1b96fd2a7229553fd44a69e84a23df1 822 Gene3D G3DSA:3.20.20.80 405 617 3.6E-4 T 28-03-2018 DDI_RS14895 e403ee1ba0860c16cc475e00b425d2eb 347 Pfam PF12833 Helix-turn-helix domain 261 342 5.8E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS14895 e403ee1ba0860c16cc475e00b425d2eb 347 Gene3D G3DSA:1.10.10.60 230 290 4.1E-10 T 28-03-2018 DDI_RS14895 e403ee1ba0860c16cc475e00b425d2eb 347 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 292 337 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS14895 e403ee1ba0860c16cc475e00b425d2eb 347 Gene3D G3DSA:1.10.10.60 291 345 1.7E-5 T 28-03-2018 DDI_RS14895 e403ee1ba0860c16cc475e00b425d2eb 347 SMART SM00342 255 341 7.3E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS14895 e403ee1ba0860c16cc475e00b425d2eb 347 SUPERFAMILY SSF46689 239 288 1.25E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 Pfam PF00106 short chain dehydrogenase 6 195 2.8E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 Gene3D G3DSA:3.40.50.720 1 238 2.3E-46 T 28-03-2018 DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 0.0064 T 28-03-2018 DDI_RS13405 9b8f1ac5a4b587c19029d1ab9a959738 251 SUPERFAMILY SSF51735 2 195 3.04E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17405 d571abb53813012fe5a4b5f4f35b711b 328 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 319 7.5E-92 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS17405 d571abb53813012fe5a4b5f4f35b711b 328 SUPERFAMILY SSF50891 189 299 1.44E-6 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS17405 d571abb53813012fe5a4b5f4f35b711b 328 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 294 1.1E-83 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS17405 d571abb53813012fe5a4b5f4f35b711b 328 SMART SM00797 23 311 6.5E-128 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 3.0E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 2.5E-239 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 1.7E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 Gene3D G3DSA:3.50.50.60 212 338 3.5E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 Gene3D G3DSA:3.40.30.10 103 197 8.9E-9 T 28-03-2018 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 Gene3D G3DSA:3.50.50.60 444 520 2.4E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 SUPERFAMILY SSF52833 1 101 2.91E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PIRSF PIRSF000238 1 520 3.1E-260 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 Pfam PF13192 Thioredoxin domain 126 191 5.4E-7 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 SUPERFAMILY SSF52833 106 197 4.41E-25 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 Gene3D G3DSA:3.40.30.10 1 94 1.5E-26 T 28-03-2018 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 SUPERFAMILY SSF51905 208 514 1.75E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 2.3E-38 T 28-03-2018 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 2.3E-38 T 28-03-2018 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 2.3E-38 T 28-03-2018 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 2.3E-38 T 28-03-2018 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 2.3E-38 T 28-03-2018 DDI_RS01310 dbd1140a4e962eb55f78f9c8dab3e5c3 520 Gene3D G3DSA:3.50.50.60 339 443 7.6E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS00615 acfce0bea8c4fe954dc78ec0f322f809 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 330 3.4E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00615 acfce0bea8c4fe954dc78ec0f322f809 334 SUPERFAMILY SSF161098 107 316 4.71E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00615 acfce0bea8c4fe954dc78ec0f322f809 334 Gene3D G3DSA:1.10.3720.10 22 319 2.6E-37 T 28-03-2018 DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 Gene3D G3DSA:3.40.50.1220 194 353 9.2E-31 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 551 1.4E-258 T 28-03-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 330 9.2E-29 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 1.5E-38 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 SUPERFAMILY SSF52467 193 357 8.8E-38 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 SUPERFAMILY SSF52518 12 186 8.16E-47 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 179 1.1E-46 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 SUPERFAMILY SSF52518 371 551 5.33E-51 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 Gene3D G3DSA:3.40.50.970 4 193 2.9E-44 T 28-03-2018 DDI_RS02330 10dcfbe834f1c5cbd61e7e6e71c0981a 559 Gene3D G3DSA:3.40.50.970 354 556 1.8E-36 T 28-03-2018 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.3E-93 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 SUPERFAMILY SSF52029 185 376 2.79E-82 T 28-03-2018 IPR027409 GroEL-like apical domain DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 SUPERFAMILY SSF54849 137 203 3.2E-24 T 28-03-2018 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.529 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 Gene3D G3DSA:1.10.560.10 374 516 2.4E-23 T 28-03-2018 IPR027413 GroEL-like equatorial domain DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 Gene3D G3DSA:3.50.7.10 186 373 7.4E-97 T 28-03-2018 IPR027409 GroEL-like apical domain DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 Gene3D G3DSA:1.10.560.10 1 185 4.1E-44 T 28-03-2018 IPR027413 GroEL-like equatorial domain DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 7.4E-256 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 SUPERFAMILY SSF48592 406 521 1.45E-76 T 28-03-2018 DDI_RS01560 25dcdf260e59b44733cf2a3c4a37b0da 548 SUPERFAMILY SSF48592 7 134 1.45E-76 T 28-03-2018 DDI_RS07185 4958f0e5a9c3e949925160d699229a62 81 Pfam PF02597 ThiS family 4 81 2.5E-19 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 DDI_RS07185 4958f0e5a9c3e949925160d699229a62 81 Gene3D G3DSA:3.10.20.30 1 81 2.4E-19 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS07185 4958f0e5a9c3e949925160d699229a62 81 SUPERFAMILY SSF54285 1 81 1.1E-22 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DDI_RS07185 4958f0e5a9c3e949925160d699229a62 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.3E-24 T 28-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 Gene3D G3DSA:3.40.50.720 2 162 2.1E-83 T 28-03-2018 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 315 5.1E-70 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 PIRSF PIRSF000149 4 334 1.2E-134 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 4.6E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 4.6E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.6E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 4.6E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.6E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 SMART SM00846 6 153 5.4E-100 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 7 327 2.3E-137 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 6 105 2.4E-41 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 SUPERFAMILY SSF51735 6 169 7.24E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 Gene3D G3DSA:3.30.360.10 163 317 5.5E-81 T 28-03-2018 DDI_RS08915 078ba3353fb99348cad3a7a869372c88 334 SUPERFAMILY SSF55347 152 315 7.44E-80 T 28-03-2018 DDI_RS04315 53e172f40fd5be3a0836cced4e55ac37 350 Gene3D G3DSA:3.40.50.1100 30 140 3.8E-19 T 28-03-2018 DDI_RS04315 53e172f40fd5be3a0836cced4e55ac37 350 Gene3D G3DSA:3.40.50.1100 141 329 1.3E-38 T 28-03-2018 DDI_RS04315 53e172f40fd5be3a0836cced4e55ac37 350 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 313 2.1E-41 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS04315 53e172f40fd5be3a0836cced4e55ac37 350 SUPERFAMILY SSF53686 15 331 2.75E-67 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS04640 7f051c5a45ad0f241ed843825fe3303f 728 SUPERFAMILY SSF56935 75 728 1.69E-126 T 28-03-2018 DDI_RS04640 7f051c5a45ad0f241ed843825fe3303f 728 Gene3D G3DSA:2.40.170.20 196 728 7.5E-85 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS04640 7f051c5a45ad0f241ed843825fe3303f 728 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 86 728 6.4E-103 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 DDI_RS04640 7f051c5a45ad0f241ed843825fe3303f 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 181 5.5E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS04640 7f051c5a45ad0f241ed843825fe3303f 728 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 58 - T 28-03-2018 IPR010916 TonB box, conserved site DDI_RS04640 7f051c5a45ad0f241ed843825fe3303f 728 Pfam PF00593 TonB dependent receptor 254 726 5.7E-60 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS04640 7f051c5a45ad0f241ed843825fe3303f 728 Gene3D G3DSA:2.170.130.10 43 189 2.0E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS19130 8fccfee310a3bca1a82cb1d8d1847c70 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 4.1E-133 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DDI_RS19130 8fccfee310a3bca1a82cb1d8d1847c70 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 3.7E-176 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DDI_RS19130 8fccfee310a3bca1a82cb1d8d1847c70 336 SUPERFAMILY SSF56655 1 325 1.34E-110 T 28-03-2018 DDI_RS19130 8fccfee310a3bca1a82cb1d8d1847c70 336 Gene3D G3DSA:3.30.540.10 1 149 8.3E-58 T 28-03-2018 DDI_RS19130 8fccfee310a3bca1a82cb1d8d1847c70 336 Gene3D G3DSA:3.30.540.10 152 336 1.6E-52 T 28-03-2018 DDI_RS19130 8fccfee310a3bca1a82cb1d8d1847c70 336 PIRSF PIRSF004532 1 333 7.3E-141 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 SUPERFAMILY SSF52172 3 125 1.04E-41 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 SMART SM00448 3 116 1.1E-42 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 Gene3D G3DSA:3.40.50.2300 2 125 5.9E-36 T 28-03-2018 DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 Gene3D G3DSA:1.10.10.10 126 229 1.5E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 SMART SM00862 150 225 2.4E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 SUPERFAMILY SSF46894 129 226 1.13E-31 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 3.4E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 Pfam PF00072 Response regulator receiver domain 5 117 6.5E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS04080 b64b7ceb6bb2065f607a39702ef7ed78 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.2E-113 T 28-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 DDI_RS06040 2c1e569f6c6779174758a2ec430473b7 186 SMART SM00072 1 179 5.5E-17 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DDI_RS06040 2c1e569f6c6779174758a2ec430473b7 186 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 176 3.1E-64 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS06040 2c1e569f6c6779174758a2ec430473b7 186 Pfam PF13238 AAA domain 5 136 9.8E-9 T 28-03-2018 DDI_RS06040 2c1e569f6c6779174758a2ec430473b7 186 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 176 35.422 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS06040 2c1e569f6c6779174758a2ec430473b7 186 SUPERFAMILY SSF52540 1 181 3.67E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06040 2c1e569f6c6779174758a2ec430473b7 186 Gene3D G3DSA:3.40.50.300 3 186 6.0E-28 T 28-03-2018 DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 Pfam PF12802 MarR family 34 92 1.4E-13 T 28-03-2018 DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 SUPERFAMILY SSF46785 3 142 4.87E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 SMART SM00347 28 128 1.4E-22 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20465 1ef3f545539cc2c74407a6cb0126a343 147 Gene3D G3DSA:1.10.10.10 1 147 4.6E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05630 9562f95933e6567709e6d75be819f60e 128 SUPERFAMILY SSF54427 1 120 2.06E-16 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS05630 9562f95933e6567709e6d75be819f60e 128 Pfam PF07858 Limonene-1,2-epoxide hydrolase catalytic domain 2 125 1.8E-40 T 28-03-2018 IPR013100 Limonene-1,2-epoxide hydrolase DDI_RS05630 9562f95933e6567709e6d75be819f60e 128 Gene3D G3DSA:3.10.450.50 1 125 2.3E-7 T 28-03-2018 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 9.9E-26 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 SMART SM00322 552 617 1.6E-12 T 28-03-2018 IPR004087 K Homology domain GO:0003676 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Gene3D G3DSA:1.10.10.400 250 316 6.2E-20 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 SUPERFAMILY SSF54211 292 488 1.67E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.487 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Pfam PF00013 KH domain 556 614 2.9E-9 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 SUPERFAMILY SSF55666 145 236 3.79E-29 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 PIRSF PIRSF005499 2 706 2.2E-300 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.7E-16 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 1.5E-22 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Gene3D G3DSA:3.30.230.70 13 249 9.0E-50 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 SMART SM00316 620 690 1.5E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Pfam PF00575 S1 RNA binding domain 619 690 1.0E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 SUPERFAMILY SSF54211 4 144 1.01E-49 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 SUPERFAMILY SSF54791 554 622 5.44E-17 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 SUPERFAMILY SSF50249 608 692 1.49E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Gene3D G3DSA:3.30.1370.10 545 614 3.1E-13 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Gene3D G3DSA:2.40.50.140 615 698 2.1E-26 T 28-03-2018 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Pfam PF03725 3' exoribonuclease family, domain 2 148 210 1.9E-13 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 1.4E-5 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 Gene3D G3DSA:3.30.230.70 317 544 9.0E-58 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS02165 2855b03621f7fa69a8f278f68d2b600c 706 SUPERFAMILY SSF55666 450 548 6.45E-28 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS17745 77b7935a9767f41332b0400c0b901683 349 SUPERFAMILY SSF52540 112 339 3.01E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17745 77b7935a9767f41332b0400c0b901683 349 Gene3D G3DSA:3.40.50.300 114 274 1.6E-22 T 28-03-2018 DDI_RS17745 77b7935a9767f41332b0400c0b901683 349 Gene3D G3DSA:1.10.40.50 276 344 3.1E-22 T 28-03-2018 DDI_RS17745 77b7935a9767f41332b0400c0b901683 349 Pfam PF03193 RsgA GTPase 98 275 2.7E-54 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DDI_RS17745 77b7935a9767f41332b0400c0b901683 349 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 339 37.175 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DDI_RS17745 77b7935a9767f41332b0400c0b901683 349 Gene3D G3DSA:2.40.50.140 35 100 1.1E-18 T 28-03-2018 DDI_RS17745 77b7935a9767f41332b0400c0b901683 349 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 333 1.0E-92 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 Gene3D G3DSA:1.10.150.20 412 485 2.7E-7 T 28-03-2018 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 Gene3D G3DSA:3.30.470.30 130 266 1.3E-16 T 28-03-2018 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 Gene3D G3DSA:1.10.287.610 24 84 3.4E-13 T 28-03-2018 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 Gene3D G3DSA:1.10.150.20 500 560 9.0E-6 T 28-03-2018 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 SUPERFAMILY SSF47781 399 559 4.45E-24 T 28-03-2018 IPR010994 RuvA domain 2-like DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 Hamap MF_01587 DNA ligase B [ligB]. 5 558 52.921 T 28-03-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 SMART SM00532 30 428 8.1E-67 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 Gene3D G3DSA:2.40.50.140 310 382 1.1E-17 T 28-03-2018 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 314 385 1.7E-18 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 323 338 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 SUPERFAMILY SSF50249 312 390 3.08E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 PIRSF PIRSF001604 26 560 1.2E-67 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 SUPERFAMILY SSF56091 26 308 8.49E-68 T 28-03-2018 DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 126 155 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site DDI_RS19740 548cf0f5dca43ad73c259737ecff50bb 560 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 31 308 1.0E-27 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 SMART SM00382 29 217 7.7E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 Pfam PF00005 ABC transporter 21 162 4.0E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 Gene3D G3DSA:2.40.50.100 253 297 4.1E-9 T 28-03-2018 DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 SUPERFAMILY SSF52540 6 247 3.12E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 Gene3D G3DSA:2.40.50.140 298 347 4.7E-7 T 28-03-2018 DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 Pfam PF08402 TOBE domain 289 365 1.9E-5 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 Gene3D G3DSA:3.40.50.300 2 252 3.0E-66 T 28-03-2018 DDI_RS09940 3d21b6793e6e3de1de6d050738d9e2cc 375 SUPERFAMILY SSF50331 243 373 3.89E-22 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS10420 c72e5968caacea736f5a9ee36a3a64b0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.8E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS10420 c72e5968caacea736f5a9ee36a3a64b0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.8E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS10420 c72e5968caacea736f5a9ee36a3a64b0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.8E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS10420 c72e5968caacea736f5a9ee36a3a64b0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.8E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS10420 c72e5968caacea736f5a9ee36a3a64b0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 3.8E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS10420 c72e5968caacea736f5a9ee36a3a64b0 259 Gene3D G3DSA:3.40.50.720 1 253 4.8E-50 T 28-03-2018 DDI_RS10420 c72e5968caacea736f5a9ee36a3a64b0 259 SUPERFAMILY SSF51735 7 254 1.1E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS10420 c72e5968caacea736f5a9ee36a3a64b0 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 3.3E-35 T 28-03-2018 DDI_RS18500 430b1eda810153f4c5b61653ff4c6242 805 Gene3D G3DSA:3.40.50.2000 2 471 7.7E-170 T 28-03-2018 DDI_RS18500 430b1eda810153f4c5b61653ff4c6242 805 PIRSF PIRSF000460 10 805 2.7E-199 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDI_RS18500 430b1eda810153f4c5b61653ff4c6242 805 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 9 802 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDI_RS18500 430b1eda810153f4c5b61653ff4c6242 805 Gene3D G3DSA:3.40.50.2000 472 788 1.2E-131 T 28-03-2018 DDI_RS18500 430b1eda810153f4c5b61653ff4c6242 805 Pfam PF00343 Carbohydrate phosphorylase 97 802 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDI_RS18500 430b1eda810153f4c5b61653ff4c6242 805 SUPERFAMILY SSF53756 6 803 1.81E-288 T 28-03-2018 DDI_RS18500 430b1eda810153f4c5b61653ff4c6242 805 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 647 659 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Gene3D G3DSA:4.10.320.10 310 372 3.3E-20 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 126 155 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Pfam PF00364 Biotin-requiring enzyme 205 274 4.5E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Pfam PF00364 Biotin-requiring enzyme 104 174 9.5E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Pfam PF00364 Biotin-requiring enzyme 4 73 7.4E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 SUPERFAMILY SSF51230 104 191 1.28E-22 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 SUPERFAMILY SSF51230 1 94 6.02E-24 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 391 621 1.3E-78 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 SUPERFAMILY SSF51230 204 294 1.27E-23 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Gene3D G3DSA:3.90.1170.30 1 43 4.5E-9 T 28-03-2018 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Gene3D G3DSA:3.90.1170.30 44 144 2.0E-22 T 28-03-2018 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Gene3D G3DSA:3.90.1170.30 145 245 4.0E-24 T 28-03-2018 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 SUPERFAMILY SSF52777 380 621 2.18E-78 T 28-03-2018 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 SUPERFAMILY SSF47005 312 357 3.01E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Gene3D G3DSA:3.30.559.10 380 622 1.3E-76 T 28-03-2018 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Pfam PF02817 e3 binding domain 318 353 6.0E-15 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 Gene3D G3DSA:2.40.50.100 246 309 1.4E-9 T 28-03-2018 DDI_RS16600 5d3beeb5509344c2c4750a5d04ee1d54 622 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 187 622 2.9E-221 T 28-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 DDI_RS01960 5421014d5b80675316d46799378c5ab1 390 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 274 1.2E-32 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain DDI_RS01960 5421014d5b80675316d46799378c5ab1 390 Pfam PF17482 Phage tail sheath C-terminal domain 275 377 1.6E-16 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain DDI_RS06565 59ae77317f9ebbcd98f43000e2bfce97 205 Gene3D G3DSA:1.10.357.10 79 205 2.5E-15 T 28-03-2018 DDI_RS06565 59ae77317f9ebbcd98f43000e2bfce97 205 Gene3D G3DSA:1.10.260.40 45 78 3.3E-9 T 28-03-2018 DDI_RS06565 59ae77317f9ebbcd98f43000e2bfce97 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 63 2.4E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS06565 59ae77317f9ebbcd98f43000e2bfce97 205 SUPERFAMILY SSF46689 12 95 1.59E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS06565 59ae77317f9ebbcd98f43000e2bfce97 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.9E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS06565 59ae77317f9ebbcd98f43000e2bfce97 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.9E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS06565 59ae77317f9ebbcd98f43000e2bfce97 205 SUPERFAMILY SSF48498 91 204 4.85E-11 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS06565 59ae77317f9ebbcd98f43000e2bfce97 205 Gene3D G3DSA:1.10.10.60 1 44 9.0E-11 T 28-03-2018 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 Gene3D G3DSA:1.10.1020.10 57 150 3.6E-34 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 Gene3D G3DSA:3.40.50.150 151 273 1.3E-16 T 28-03-2018 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 9.1E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 9.1E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 9.1E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 9.1E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 253 1.8E-74 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 SUPERFAMILY SSF53335 5 269 1.91E-72 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS18365 794b671b36f1937848ba65669977a33b 275 PIRSF PIRSF000398 1 274 2.8E-67 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DDI_RS18365 794b671b36f1937848ba65669977a33b 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 269 9.7E-97 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS02775 5ebce6cd11244b50e86fc14fb0a89906 312 SUPERFAMILY SSF53822 26 303 1.73E-72 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS02775 5ebce6cd11244b50e86fc14fb0a89906 312 Pfam PF13407 Periplasmic binding protein domain 27 278 9.9E-57 T 28-03-2018 IPR025997 Periplasmic binding protein DDI_RS02775 5ebce6cd11244b50e86fc14fb0a89906 312 Gene3D G3DSA:3.40.50.2300 130 310 1.4E-39 T 28-03-2018 DDI_RS02775 5ebce6cd11244b50e86fc14fb0a89906 312 Gene3D G3DSA:3.40.50.2300 17 129 3.0E-22 T 28-03-2018 DDI_RS19660 c3b5b3217085f55effcc4111d841592e 367 Pfam PF00480 ROK family 88 243 1.1E-27 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 DDI_RS19660 c3b5b3217085f55effcc4111d841592e 367 SUPERFAMILY SSF53067 76 366 1.3E-38 T 28-03-2018 DDI_RS19660 c3b5b3217085f55effcc4111d841592e 367 Gene3D G3DSA:3.30.420.40 72 196 8.7E-24 T 28-03-2018 DDI_RS19660 c3b5b3217085f55effcc4111d841592e 367 SUPERFAMILY SSF46785 6 69 3.07E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19660 c3b5b3217085f55effcc4111d841592e 367 Gene3D G3DSA:3.30.420.40 197 367 9.3E-32 T 28-03-2018 DDI_RS19660 c3b5b3217085f55effcc4111d841592e 367 Gene3D G3DSA:1.10.10.10 5 71 6.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03740 5772cfcd6f97e4c1e8cedde6961a9a61 185 SUPERFAMILY SSF55194 2 184 3.53E-73 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DDI_RS03740 5772cfcd6f97e4c1e8cedde6961a9a61 185 Pfam PF01765 Ribosome recycling factor 20 183 3.0E-64 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DDI_RS03740 5772cfcd6f97e4c1e8cedde6961a9a61 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.891 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DDI_RS03740 5772cfcd6f97e4c1e8cedde6961a9a61 185 Gene3D G3DSA:3.30.1360.40 31 90 1.8E-27 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 DDI_RS03740 5772cfcd6f97e4c1e8cedde6961a9a61 185 Gene3D G3DSA:1.10.132.20 91 185 6.7E-38 T 28-03-2018 DDI_RS03740 5772cfcd6f97e4c1e8cedde6961a9a61 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.2E-78 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DDI_RS04380 4429e70e5554e5fac31738cb9fac4d12 83 Pfam PF01197 Ribosomal protein L31 1 78 2.1E-22 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS04380 4429e70e5554e5fac31738cb9fac4d12 83 SUPERFAMILY SSF143800 1 80 4.32E-21 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS04380 4429e70e5554e5fac31738cb9fac4d12 83 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.6E-13 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS04380 4429e70e5554e5fac31738cb9fac4d12 83 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.6E-13 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS04380 4429e70e5554e5fac31738cb9fac4d12 83 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.6E-13 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS04380 4429e70e5554e5fac31738cb9fac4d12 83 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.882 T 28-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS04380 4429e70e5554e5fac31738cb9fac4d12 83 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.6E-16 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 Gene3D G3DSA:1.10.150.280 779 894 2.0E-9 T 28-03-2018 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 3.2E-25 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 733 5.9E-177 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 Gene3D G3DSA:3.20.20.140 1 245 2.3E-39 T 28-03-2018 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 SMART SM00481 7 74 9.6E-27 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 Gene3D G3DSA:2.40.50.140 978 1074 4.6E-14 T 28-03-2018 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 Pfam PF02811 PHP domain 8 172 1.2E-42 T 28-03-2018 IPR004013 PHP domain GO:0003824 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1001 1071 6.9E-7 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DDI_RS03800 3ef2207a7e7a456c5004be785610eb1e 1160 SUPERFAMILY SSF89550 6 263 1.28E-18 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 SUPERFAMILY SSF100920 384 539 1.96E-61 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 Gene3D G3DSA:1.20.1270.10 532 618 3.5E-19 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 SUPERFAMILY SSF53067 4 183 4.58E-66 T 28-03-2018 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 Gene3D G3DSA:3.30.420.40 197 366 6.2E-45 T 28-03-2018 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 SUPERFAMILY SSF100934 507 601 3.14E-26 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.942 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 198 208 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.5E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 SUPERFAMILY SSF53067 187 382 5.77E-67 T 28-03-2018 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 Gene3D G3DSA:3.30.420.40 1 196 2.3E-80 T 28-03-2018 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 Gene3D G3DSA:2.60.34.10 390 531 1.8E-64 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 Pfam PF00012 Hsp70 protein 4 602 2.1E-265 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS17045 3b503fb2eae9eb2f2b143664738692f4 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 2.4E-291 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 Gene3D G3DSA:2.30.30.100 272 318 3.0E-13 T 28-03-2018 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.2E-22 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 Pfam PF08279 HTH domain 9 58 2.7E-9 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 SUPERFAMILY SSF50037 271 317 1.28E-10 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 75 1.8E-25 T 28-03-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 31.529 T 28-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 8.7E-74 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 SUPERFAMILY SSF55681 73 267 4.14E-56 T 28-03-2018 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 Gene3D G3DSA:3.30.930.10 65 270 2.4E-59 T 28-03-2018 DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 SUPERFAMILY SSF46785 6 60 1.47E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 Gene3D G3DSA:1.10.10.10 1 64 9.2E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21390 d27f1e2a3aed3220f1a92b521a30f4b4 319 Pfam PF02237 Biotin protein ligase C terminal domain 273 317 1.0E-10 T 28-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 DDI_RS08035 a230d6dc20396ddcba9129e45a3ef9df 489 Pfam PF11066 Protein of unknown function (DUF2867) 337 466 6.9E-11 T 28-03-2018 IPR021295 Protein of unknown function DUF2867 DDI_RS08035 a230d6dc20396ddcba9129e45a3ef9df 489 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 117 7.0E-11 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS08035 a230d6dc20396ddcba9129e45a3ef9df 489 Gene3D G3DSA:3.40.50.720 8 310 7.1E-21 T 28-03-2018 DDI_RS08035 a230d6dc20396ddcba9129e45a3ef9df 489 SUPERFAMILY SSF51735 8 297 3.79E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 Gene3D G3DSA:3.40.50.1260 175 371 5.8E-75 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 Gene3D G3DSA:3.40.50.1260 3 174 1.9E-61 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.0E-83 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 Pfam PF00162 Phosphoglycerate kinase 6 373 3.0E-138 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 SUPERFAMILY SSF53748 4 383 2.71E-144 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.133 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 28-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17175 571a8eaa9c2d0136707935477b100eb1 387 PIRSF PIRSF000724 1 387 2.4E-132 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS18845 efb653fe5ad519763fe7b6f7723d201b 344 Gene3D G3DSA:1.10.287.210 200 292 4.1E-15 T 28-03-2018 DDI_RS18845 efb653fe5ad519763fe7b6f7723d201b 344 Pfam PF02706 Chain length determinant protein 14 65 5.4E-12 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DDI_RS18845 efb653fe5ad519763fe7b6f7723d201b 344 SUPERFAMILY SSF160355 53 315 3.14E-67 T 28-03-2018 DDI_RS18845 efb653fe5ad519763fe7b6f7723d201b 344 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 7 344 50.616 T 28-03-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 DDI_RS18845 efb653fe5ad519763fe7b6f7723d201b 344 Gene3D G3DSA:3.30.1890.10 41 199 2.6E-47 T 28-03-2018 DDI_RS02515 a212e4500758faa0771722974cda91fa 429 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 209 401 1.5E-34 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS02515 a212e4500758faa0771722974cda91fa 429 Gene3D G3DSA:2.40.50.100 134 249 2.0E-9 T 28-03-2018 DDI_RS02515 a212e4500758faa0771722974cda91fa 429 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 116 324 3.1E-62 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS02515 a212e4500758faa0771722974cda91fa 429 SUPERFAMILY SSF111369 128 329 4.97E-11 T 28-03-2018 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 1.1E-78 T 28-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 Gene3D G3DSA:3.40.190.10 107 199 2.4E-38 T 28-03-2018 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 SUPERFAMILY SSF54782 220 310 2.48E-28 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 28-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 PIRSF PIRSF001438 1 312 7.9E-123 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 296 2.1E-23 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 298 1.9E-114 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 Gene3D G3DSA:3.40.190.10 2 106 1.9E-43 T 28-03-2018 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 4.5E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 4.5E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 4.5E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 4.5E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 4.5E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 Gene3D G3DSA:3.30.160.40 221 305 1.6E-26 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 298 40.255 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18715 3fbe4e013673fb305a15a9b78a46d1a3 313 SUPERFAMILY SSF53850 5 219 2.08E-86 T 28-03-2018 DDI_RS01790 e2277d90fe0354ab2b04d7be6bdc4f4f 195 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 90 188 2.2E-28 T 28-03-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 DDI_RS01790 e2277d90fe0354ab2b04d7be6bdc4f4f 195 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 13 74 1.8E-20 T 28-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 DDI_RS01790 e2277d90fe0354ab2b04d7be6bdc4f4f 195 Gene3D G3DSA:1.10.260.40 4 76 1.8E-5 T 28-03-2018 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 Gene3D G3DSA:3.20.20.70 2 354 7.2E-98 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 SUPERFAMILY SSF51395 5 349 1.07E-95 T 28-03-2018 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 SUPERFAMILY SSF51905 480 736 1.24E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 SUPERFAMILY SSF51905 864 923 1.24E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 340 1.2E-72 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 Pfam PF04205 FMN-binding domain 393 461 2.5E-6 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 Pfam PF00890 FAD binding domain 483 905 2.8E-84 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 Gene3D G3DSA:3.90.700.10 748 856 6.0E-33 T 28-03-2018 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 Gene3D G3DSA:3.50.50.60 475 747 8.0E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 SMART SM00900 390 464 0.0043 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 SUPERFAMILY SSF56425 719 865 9.27E-44 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS01740 ff6597949f3bc641f41c343085f78f00 925 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 483 916 3.6E-150 T 28-03-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.2E-44 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 SUPERFAMILY SSF52317 5 204 3.0E-57 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 3.5E-6 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 3.5E-6 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 3.5E-6 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 2.8E-40 T 28-03-2018 IPR017926 Glutamine amidotransferase DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 SUPERFAMILY SSF54810 405 525 2.09E-51 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 SUPERFAMILY SSF52402 193 446 4.19E-57 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 1.1E-152 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 Gene3D G3DSA:3.40.50.880 5 220 3.0E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.4E-6 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.4E-6 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.4E-6 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.2E-7 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.2E-7 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.2E-7 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 Pfam PF02540 NAD synthase 223 255 3.5E-6 T 28-03-2018 IPR022310 NAD/GMP synthase DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 1.6E-83 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 Gene3D G3DSA:3.30.300.10 401 525 4.2E-53 T 28-03-2018 DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 Gene3D G3DSA:3.40.50.620 221 400 2.5E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS13975 77d47611127540eee8f86f04406fcaa7 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.02 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 SUPERFAMILY SSF51445 42 405 1.47E-99 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 PRINTS PR00133 Glycosyl hydrolase family 3 signature 132 151 9.4E-20 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 PRINTS PR00133 Glycosyl hydrolase family 3 signature 285 303 9.4E-20 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 PRINTS PR00133 Glycosyl hydrolase family 3 signature 113 129 9.4E-20 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 PRINTS PR00133 Glycosyl hydrolase family 3 signature 215 231 9.4E-20 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 PRINTS PR00133 Glycosyl hydrolase family 3 signature 178 194 9.4E-20 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 58 363 5.7E-89 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 Gene3D G3DSA:3.20.20.300 44 379 1.2E-103 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 Pfam PF14310 Fibronectin type III-like domain 698 766 3.8E-22 T 28-03-2018 IPR026891 Fibronectin type III-like domain DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 Gene3D G3DSA:3.40.50.1700 392 660 2.1E-83 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 Gene3D G3DSA:2.60.40.10 661 776 3.2E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 285 302 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 SMART SM01217 697 766 1.2E-32 T 28-03-2018 IPR026891 Fibronectin type III-like domain DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 407 660 2.5E-61 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 SUPERFAMILY SSF52279 407 476 1.01E-58 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DDI_RS07315 476c0d84c405d1001d60c5de5ebbe6ff 777 SUPERFAMILY SSF52279 507 663 1.01E-58 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 Gene3D G3DSA:2.40.50.140 15 154 2.0E-39 T 28-03-2018 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 SUPERFAMILY SSF55681 162 502 8.85E-124 T 28-03-2018 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 PIRSF PIRSF039101 1 505 2.6E-203 T 28-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 2.4E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 2.4E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 2.4E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 2.4E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 2.4E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 Gene3D G3DSA:3.30.930.10 156 501 3.9E-105 T 28-03-2018 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 9.2E-83 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.368 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 SUPERFAMILY SSF50249 13 155 2.69E-46 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 505 2.5E-235 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS02405 75b7fdfc2225b846174508fa3016537f 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.0E-15 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DDI_RS08050 97140ad9771e7ed529e15adf592e51db 551 SUPERFAMILY SSF52540 1 332 9.14E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08050 97140ad9771e7ed529e15adf592e51db 551 Pfam PF11398 Protein of unknown function (DUF2813) 1 376 4.6E-155 T 28-03-2018 IPR022602 Protein of unknown function DUF2813 DDI_RS08050 97140ad9771e7ed529e15adf592e51db 551 Gene3D G3DSA:3.40.50.300 1 364 6.6E-18 T 28-03-2018 DDI_RS10030 1669f9a685c346494a3e8a6c50b9a801 263 SMART SM00346 13 102 8.5E-37 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS10030 1669f9a685c346494a3e8a6c50b9a801 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 1.8E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS10030 1669f9a685c346494a3e8a6c50b9a801 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 3.1E-44 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal DDI_RS10030 1669f9a685c346494a3e8a6c50b9a801 263 Gene3D G3DSA:1.10.10.10 11 99 8.1E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10030 1669f9a685c346494a3e8a6c50b9a801 263 Gene3D G3DSA:3.30.450.40 100 263 3.7E-52 T 28-03-2018 IPR029016 GAF domain-like DDI_RS10030 1669f9a685c346494a3e8a6c50b9a801 263 SUPERFAMILY SSF46785 13 86 1.52E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10030 1669f9a685c346494a3e8a6c50b9a801 263 SUPERFAMILY SSF55781 77 259 1.11E-52 T 28-03-2018 IPR029016 GAF domain-like DDI_RS01385 2f6ea0ef16ec6de89124ed14713ef2b4 290 Gene3D G3DSA:1.10.3720.10 56 290 9.2E-45 T 28-03-2018 DDI_RS01385 2f6ea0ef16ec6de89124ed14713ef2b4 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 281 4.9E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01385 2f6ea0ef16ec6de89124ed14713ef2b4 290 Gene3D G3DSA:1.20.58.370 1 40 2.5E-6 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain DDI_RS01385 2f6ea0ef16ec6de89124ed14713ef2b4 290 SUPERFAMILY SSF160964 10 44 5.1E-5 T 28-03-2018 DDI_RS01385 2f6ea0ef16ec6de89124ed14713ef2b4 290 SUPERFAMILY SSF161098 50 278 1.16E-57 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09605 ed66b9cdb7ec8a6952e76df052842e4e 283 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 45.155 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DDI_RS09605 ed66b9cdb7ec8a6952e76df052842e4e 283 Gene3D G3DSA:1.10.8.10 1 84 1.4E-23 T 28-03-2018 DDI_RS09605 ed66b9cdb7ec8a6952e76df052842e4e 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 275 5.6E-88 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DDI_RS09605 ed66b9cdb7ec8a6952e76df052842e4e 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 2.3E-89 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DDI_RS09605 ed66b9cdb7ec8a6952e76df052842e4e 283 SUPERFAMILY SSF53335 2 273 2.64E-61 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS09605 ed66b9cdb7ec8a6952e76df052842e4e 283 Pfam PF13847 Methyltransferase domain 112 245 2.3E-21 T 28-03-2018 IPR025714 Methyltransferase domain DDI_RS09605 ed66b9cdb7ec8a6952e76df052842e4e 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS09605 ed66b9cdb7ec8a6952e76df052842e4e 283 Gene3D G3DSA:3.40.50.150 85 276 8.6E-44 T 28-03-2018 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 Gene3D G3DSA:3.40.47.10 256 384 3.4E-33 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 Gene3D G3DSA:3.40.47.10 1 255 9.0E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 8.1E-143 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 4 387 7.1E-216 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 SUPERFAMILY SSF53901 262 386 1.26E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 59.165 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 PIRSF PIRSF000429 1 387 2.6E-130 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 Pfam PF00108 Thiolase, N-terminal domain 5 254 5.0E-83 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 SUPERFAMILY SSF53901 1 256 1.75E-76 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS21330 524f5cd63c11975d0ea859964463253b 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 3.0E-48 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 DDI_RS18580 9b2c12c3e8b3c8c8a8e8e10c6fb85fd9 172 PRINTS PR01100 Shikimate kinase family signature 100 117 6.9E-5 T 28-03-2018 DDI_RS18580 9b2c12c3e8b3c8c8a8e8e10c6fb85fd9 172 PRINTS PR01100 Shikimate kinase family signature 6 21 6.9E-5 T 28-03-2018 DDI_RS18580 9b2c12c3e8b3c8c8a8e8e10c6fb85fd9 172 Pfam PF01202 Shikimate kinase 12 166 5.0E-14 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDI_RS18580 9b2c12c3e8b3c8c8a8e8e10c6fb85fd9 172 Gene3D G3DSA:3.40.50.300 4 172 2.1E-30 T 28-03-2018 DDI_RS18580 9b2c12c3e8b3c8c8a8e8e10c6fb85fd9 172 SUPERFAMILY SSF52540 3 169 4.42E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18580 9b2c12c3e8b3c8c8a8e8e10c6fb85fd9 172 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 2.8E-66 T 28-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 DDI_RS17720 49ea226aeff867b2f689fe4b3c6568b3 282 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS17720 49ea226aeff867b2f689fe4b3c6568b3 282 Gene3D G3DSA:3.40.50.300 2 278 2.0E-72 T 28-03-2018 DDI_RS17720 49ea226aeff867b2f689fe4b3c6568b3 282 Pfam PF00005 ABC transporter 36 184 1.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS17720 49ea226aeff867b2f689fe4b3c6568b3 282 SMART SM00382 45 234 2.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS17720 49ea226aeff867b2f689fe4b3c6568b3 282 SUPERFAMILY SSF52540 32 266 2.81E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01405 94bf591e5a489d34562c883c2ea611ae 370 Pfam PF00480 ROK family 77 333 2.2E-35 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 DDI_RS01405 94bf591e5a489d34562c883c2ea611ae 370 Gene3D G3DSA:1.10.10.10 7 63 2.1E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01405 94bf591e5a489d34562c883c2ea611ae 370 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 50 4.4E-5 T 28-03-2018 DDI_RS01405 94bf591e5a489d34562c883c2ea611ae 370 Gene3D G3DSA:3.30.420.40 64 190 2.5E-23 T 28-03-2018 DDI_RS01405 94bf591e5a489d34562c883c2ea611ae 370 SUPERFAMILY SSF46785 8 69 8.67E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01405 94bf591e5a489d34562c883c2ea611ae 370 SUPERFAMILY SSF53067 75 359 1.94E-38 T 28-03-2018 DDI_RS01405 94bf591e5a489d34562c883c2ea611ae 370 Gene3D G3DSA:3.30.420.40 191 369 1.6E-29 T 28-03-2018 DDI_RS02110 0337978dda11542a299b7bfbbfa4b8e5 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 7.5E-102 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 DDI_RS02110 0337978dda11542a299b7bfbbfa4b8e5 277 Gene3D G3DSA:3.20.20.20 154 276 2.6E-49 T 28-03-2018 DDI_RS02110 0337978dda11542a299b7bfbbfa4b8e5 277 Gene3D G3DSA:3.20.20.20 14 153 3.8E-59 T 28-03-2018 DDI_RS02110 0337978dda11542a299b7bfbbfa4b8e5 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS02110 0337978dda11542a299b7bfbbfa4b8e5 277 Pfam PF00809 Pterin binding enzyme 18 257 2.0E-86 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS02110 0337978dda11542a299b7bfbbfa4b8e5 277 SUPERFAMILY SSF51717 7 274 4.97E-106 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS19505 e23a976e2d595b52d9580bd8b73386c7 335 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS19505 e23a976e2d595b52d9580bd8b73386c7 335 SMART SM00382 48 240 7.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19505 e23a976e2d595b52d9580bd8b73386c7 335 SUPERFAMILY SSF52540 14 262 1.11E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19505 e23a976e2d595b52d9580bd8b73386c7 335 Pfam PF00005 ABC transporter 39 190 1.9E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19505 e23a976e2d595b52d9580bd8b73386c7 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 325 1.9E-24 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS19505 e23a976e2d595b52d9580bd8b73386c7 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 307 2.4E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS19505 e23a976e2d595b52d9580bd8b73386c7 335 Gene3D G3DSA:3.40.50.300 11 335 2.4E-77 T 28-03-2018 DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 SMART SM00490 505 589 1.5E-21 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 8.0E-245 T 28-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 Pfam PF17191 RecG wedge domain 15 171 1.7E-20 T 28-03-2018 IPR033454 RecG, wedge domain DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 SUPERFAMILY SSF52540 197 453 4.52E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 Gene3D G3DSA:2.40.50.140 51 144 2.9E-12 T 28-03-2018 DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 SMART SM00487 265 459 4.7E-30 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 SUPERFAMILY SSF50249 8 175 5.14E-44 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 Gene3D G3DSA:1.10.150.20 3 50 1.7E-4 T 28-03-2018 DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 1.5E-16 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 Gene3D G3DSA:3.40.50.300 457 630 3.0E-27 T 28-03-2018 DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 Pfam PF00270 DEAD/DEAH box helicase 293 431 4.0E-17 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 SUPERFAMILY SSF52540 508 652 4.19E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 SUPERFAMILY SSF52540 292 342 4.19E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19765 b171c288d071fa738c9c27531a6cc475 693 Gene3D G3DSA:3.40.50.300 250 456 5.5E-35 T 28-03-2018 DDI_RS01035 26ec16785dbad7988165399276fc71df 211 SUPERFAMILY SSF55676 18 210 7.46E-59 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01035 26ec16785dbad7988165399276fc71df 211 ProDom PD009844 CYTOLYTIC TOXIN DELTA-ENDOTOXIN SPORULATION PLASMID TYPE-1AA TOCIN 3D-STRUCTURE CRYET29 TYPE-1BA 14 211 4.0E-43 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01035 26ec16785dbad7988165399276fc71df 211 Pfam PF01338 Bacillus thuringiensis toxin 14 210 1.6E-68 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01035 26ec16785dbad7988165399276fc71df 211 Gene3D G3DSA:3.40.198.10 22 206 7.4E-59 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 Pfam PF00005 ABC transporter 17 159 1.8E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 Gene3D G3DSA:2.40.50.100 237 281 2.9E-8 T 28-03-2018 DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 SMART SM00382 26 209 2.0E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 Gene3D G3DSA:2.40.50.140 282 337 6.8E-9 T 28-03-2018 DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 SUPERFAMILY SSF50331 234 352 4.62E-22 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 Pfam PF08402 TOBE domain 271 344 4.3E-13 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 Gene3D G3DSA:3.40.50.300 1 235 3.2E-74 T 28-03-2018 DDI_RS02550 ab911c3af386742b4cacd15a3ed3205f 359 SUPERFAMILY SSF52540 1 241 2.13E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08110 a6aaa13d59ad34c967d12f397fc03c14 204 SUPERFAMILY SSF89392 23 203 9.02E-56 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DDI_RS08110 a6aaa13d59ad34c967d12f397fc03c14 204 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 192 1.1E-56 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DDI_RS08110 a6aaa13d59ad34c967d12f397fc03c14 204 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 10 204 2.2E-98 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 DDI_RS08110 a6aaa13d59ad34c967d12f397fc03c14 204 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 11 202 31.975 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 DDI_RS08110 a6aaa13d59ad34c967d12f397fc03c14 204 Gene3D G3DSA:2.50.20.10 20 203 3.3E-40 T 28-03-2018 DDI_RS01720 55e1e5d4322f3ea09dd4891e578ce071 463 Gene3D G3DSA:1.20.1250.20 25 228 6.5E-24 T 28-03-2018 DDI_RS01720 55e1e5d4322f3ea09dd4891e578ce071 463 PIRSF PIRSF002808 9 461 2.3E-100 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS01720 55e1e5d4322f3ea09dd4891e578ce071 463 Gene3D G3DSA:1.20.1250.20 246 463 8.4E-18 T 28-03-2018 DDI_RS01720 55e1e5d4322f3ea09dd4891e578ce071 463 SUPERFAMILY SSF103473 20 452 8.5E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS01720 55e1e5d4322f3ea09dd4891e578ce071 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 1.5E-141 T 28-03-2018 DDI_RS01720 55e1e5d4322f3ea09dd4891e578ce071 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 DDI_RS01720 55e1e5d4322f3ea09dd4891e578ce071 463 Pfam PF07690 Major Facilitator Superfamily 35 397 1.1E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 SUPERFAMILY SSF56042 143 306 1.64E-39 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 Gene3D G3DSA:3.30.1330.10 1 142 1.9E-31 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 Gene3D G3DSA:3.90.650.10 145 322 1.3E-45 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 298 2.4E-9 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 PIRSF PIRSF005303 1 322 4.5E-83 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 SUPERFAMILY SSF55326 4 138 1.26E-32 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 1.8E-19 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 1.6E-112 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DDI_RS04175 da0fffd7caa24e50a07046625963ad52 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.049 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 Gene3D G3DSA:1.20.5.480 253 291 2.3E-19 T 28-03-2018 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 286 1.8E-18 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 Gene3D G3DSA:3.30.70.20 153 252 5.7E-23 T 28-03-2018 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 Gene3D G3DSA:3.30.70.20 114 152 1.3E-15 T 28-03-2018 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 Gene3D G3DSA:3.30.70.20 13 43 0.0016 T 28-03-2018 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.2E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 Gene3D G3DSA:3.30.70.20 44 113 1.2E-20 T 28-03-2018 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 SUPERFAMILY SSF54862 27 277 3.35E-71 T 28-03-2018 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 PIRSF PIRSF036298 1 302 1.7E-161 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 287 2.1E-143 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 DDI_RS06220 5c50e72ac1e6105bd50da18932c42621 302 Pfam PF12800 4Fe-4S binding domain 38 50 0.019 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 169 292 5.8E-20 T 28-03-2018 IPR000014 PAS domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 Pfam PF13426 PAS domain 183 284 3.3E-12 T 28-03-2018 IPR000014 PAS domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 Pfam PF01590 GAF domain 32 155 1.2E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 Gene3D G3DSA:3.30.450.40 9 170 5.3E-25 T 28-03-2018 IPR029016 GAF domain-like DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 SMART SM00065 26 169 9.2E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 Gene3D G3DSA:3.30.450.20 171 291 3.2E-22 T 28-03-2018 DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 451 4.7E-43 T 28-03-2018 IPR000160 GGDEF domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 Gene3D G3DSA:3.20.20.450 455 721 6.8E-87 T 28-03-2018 IPR001633 EAL domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 SMART SM00267 285 453 3.4E-64 T 28-03-2018 IPR000160 GGDEF domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 448 7.8E-48 T 28-03-2018 IPR000160 GGDEF domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 Gene3D G3DSA:3.30.70.270 292 454 1.1E-57 T 28-03-2018 DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 SUPERFAMILY SSF55073 301 454 2.35E-48 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 SMART SM00091 173 239 2.1E-7 T 28-03-2018 IPR000014 PAS domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 SMART SM00052 463 709 3.2E-96 T 28-03-2018 IPR001633 EAL domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 SUPERFAMILY SSF55781 31 165 3.92E-26 T 28-03-2018 IPR029016 GAF domain-like DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 SUPERFAMILY SSF55785 160 283 6.28E-20 T 28-03-2018 IPR000014 PAS domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 SUPERFAMILY SSF141868 472 714 1.57E-79 T 28-03-2018 IPR001633 EAL domain DDI_RS10045 e45d3d80bf96a75d1af84b3dcbe01ecd 723 Pfam PF00563 EAL domain 472 704 4.3E-64 T 28-03-2018 IPR001633 EAL domain DDI_RS11485 721bd70309aa32e86c9984785a820ea5 184 PIRSF PIRSF010252 1 178 1.3E-58 T 28-03-2018 IPR009809 Cell division protein ZapC DDI_RS11485 721bd70309aa32e86c9984785a820ea5 184 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 177 37.952 T 28-03-2018 IPR009809 Cell division protein ZapC DDI_RS11485 721bd70309aa32e86c9984785a820ea5 184 Pfam PF07126 Cell-division protein ZapC 3 170 2.5E-66 T 28-03-2018 IPR009809 Cell division protein ZapC DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 SMART SM00382 30 217 1.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 Pfam PF00005 ABC transporter 21 169 2.5E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 Gene3D G3DSA:3.40.50.300 1 252 6.1E-77 T 28-03-2018 DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 Pfam PF09383 NIL domain 268 339 7.2E-18 T 28-03-2018 IPR018449 NIL domain DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 SMART SM00930 265 340 2.4E-22 T 28-03-2018 IPR018449 NIL domain DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 SUPERFAMILY SSF55021 248 343 6.75E-25 T 28-03-2018 DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 Gene3D G3DSA:3.30.70.260 253 343 2.6E-25 T 28-03-2018 DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.0E-194 T 28-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 DDI_RS15360 4685a30ff63df86eaa0213314984e69f 343 SUPERFAMILY SSF52540 1 240 3.99E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19250 7bab16bde73d990de1934c487748d17c 249 SUPERFAMILY SSF51695 6 241 3.14E-62 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 DDI_RS19250 7bab16bde73d990de1934c487748d17c 249 Gene3D G3DSA:3.20.20.190 2 248 3.7E-59 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 DDI_RS19250 7bab16bde73d990de1934c487748d17c 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 240 2.0E-40 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DDI_RS00010 7b0df9748c5aa6f122ac195e5a424d4b 362 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 151 247 6.9E-20 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS00010 7b0df9748c5aa6f122ac195e5a424d4b 362 SUPERFAMILY SSF161098 149 341 5.36E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00010 7b0df9748c5aa6f122ac195e5a424d4b 362 Gene3D G3DSA:1.10.3720.10 27 361 1.1E-35 T 28-03-2018 DDI_RS00010 7b0df9748c5aa6f122ac195e5a424d4b 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 169 355 9.6E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07145 0f24b8ecc2eb2e7ae49ae06a76eaab28 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 49.256 T 28-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 DDI_RS07145 0f24b8ecc2eb2e7ae49ae06a76eaab28 384 Gene3D G3DSA:3.40.640.10 116 278 4.8E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS07145 0f24b8ecc2eb2e7ae49ae06a76eaab28 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 DDI_RS07145 0f24b8ecc2eb2e7ae49ae06a76eaab28 384 Gene3D G3DSA:3.40.640.10 55 114 0.32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS07145 0f24b8ecc2eb2e7ae49ae06a76eaab28 384 Gene3D G3DSA:3.90.1150.10 279 384 1.9E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS07145 0f24b8ecc2eb2e7ae49ae06a76eaab28 384 Pfam PF00155 Aminotransferase class I and II 41 380 2.3E-61 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS07145 0f24b8ecc2eb2e7ae49ae06a76eaab28 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 380 1.0E-139 T 28-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 DDI_RS07145 0f24b8ecc2eb2e7ae49ae06a76eaab28 384 SUPERFAMILY SSF53383 3 383 2.37E-110 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 Pfam PF12404 Peptidase 6 82 7.9E-34 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 PIRSF PIRSF036388 2 431 1.2E-225 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 Gene3D G3DSA:3.40.630.10 94 431 5.2E-115 T 28-03-2018 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 Hamap MF_00504 Peptidase B [pepB]. 4 428 65.103 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 SUPERFAMILY SSF53187 108 428 5.34E-105 T 28-03-2018 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 9.7E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 9.7E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 9.7E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 9.7E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 9.7E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS14055 c88dba3e56f8ebf33f9425f8bb071bd3 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 7.9E-106 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDI_RS06885 3167cbb9ca4005e11d627a0bf5158caf 587 Gene3D G3DSA:3.40.50.300 84 555 3.4E-25 T 28-03-2018 DDI_RS06885 3167cbb9ca4005e11d627a0bf5158caf 587 Pfam PF12696 TraM recognition site of TraD and TraG 400 494 3.1E-8 T 28-03-2018 IPR032689 TraD/TraG, TraM recognition site DDI_RS06885 3167cbb9ca4005e11d627a0bf5158caf 587 SUPERFAMILY SSF52540 150 534 2.01E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06885 3167cbb9ca4005e11d627a0bf5158caf 587 Pfam PF01935 Domain of unknown function DUF87 174 239 3.1E-5 T 28-03-2018 IPR002789 Helicase HerA, central domain DDI_RS06885 3167cbb9ca4005e11d627a0bf5158caf 587 PIRSF PIRSF003273 1 587 5.2E-284 T 28-03-2018 IPR016387 Mobilization, MobA DDI_RS18670 9f5886df97f473b70a2a306922d86be8 316 Gene3D G3DSA:3.30.460.20 1 124 3.2E-9 T 28-03-2018 DDI_RS18670 9f5886df97f473b70a2a306922d86be8 316 SUPERFAMILY SSF144083 251 313 1.22E-20 T 28-03-2018 DDI_RS18670 9f5886df97f473b70a2a306922d86be8 316 Gene3D G3DSA:1.20.58.340 131 248 6.7E-9 T 28-03-2018 DDI_RS18670 9f5886df97f473b70a2a306922d86be8 316 SUPERFAMILY SSF143865 1 255 3.14E-37 T 28-03-2018 DDI_RS18670 9f5886df97f473b70a2a306922d86be8 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 4 316 7.0E-107 T 28-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 DDI_RS18670 9f5886df97f473b70a2a306922d86be8 316 Pfam PF01544 CorA-like Mg2+ transporter protein 27 312 3.5E-53 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DDI_RS18670 9f5886df97f473b70a2a306922d86be8 316 Gene3D G3DSA:1.20.58.340 249 316 5.9E-21 T 28-03-2018 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 Gene3D G3DSA:3.30.2350.10 92 317 1.9E-65 T 28-03-2018 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 Pfam PF01479 S4 domain 20 66 2.9E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 3.7E-92 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 SUPERFAMILY SSF55120 95 314 2.88E-64 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 Pfam PF00849 RNA pseudouridylate synthase 102 249 2.4E-29 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 SUPERFAMILY SSF55174 19 70 5.55E-8 T 28-03-2018 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 Gene3D G3DSA:3.10.290.10 7 77 1.2E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS11790 4a77ed575f81591a48a124e530803f8d 318 SMART SM00363 20 82 1.1E-6 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 Gene3D G3DSA:3.40.50.300 135 784 5.1E-41 T 28-03-2018 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 Pfam PF00270 DEAD/DEAH box helicase 602 762 1.8E-19 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 Gene3D G3DSA:3.40.50.300 785 953 2.6E-26 T 28-03-2018 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SUPERFAMILY SSF52540 779 987 8.99E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SUPERFAMILY SSF141259 468 545 5.75E-24 T 28-03-2018 IPR003711 CarD-like/TRCF domain DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 Pfam PF03461 TRCF domain 1006 1098 8.7E-29 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 Pfam PF02559 CarD-like/TRCF domain 477 572 1.1E-24 T 28-03-2018 IPR003711 CarD-like/TRCF domain DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1138 28.761 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SUPERFAMILY SSF143517 992 1144 5.89E-42 T 28-03-2018 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SUPERFAMILY SSF52540 12 339 2.48E-100 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 Pfam PF00271 Helicase conserved C-terminal domain 803 906 8.3E-18 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SUPERFAMILY SSF52540 351 463 2.81E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SMART SM00490 823 907 6.8E-20 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SMART SM00982 1005 1105 4.5E-49 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SUPERFAMILY SSF52540 520 780 1.98E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SMART SM00487 597 787 4.9E-33 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DDI_RS11630 f90c391ee088f87e6628ef7917be1a34 1149 SMART SM01058 476 573 1.5E-49 T 28-03-2018 IPR003711 CarD-like/TRCF domain DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Gene3D G3DSA:3.40.50.300 552 765 4.4E-55 T 28-03-2018 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Gene3D G3DSA:1.10.8.60 766 857 7.0E-22 T 28-03-2018 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 SMART SM00382 597 738 7.7E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 SMART SM00382 198 344 6.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 SUPERFAMILY SSF52540 159 545 4.43E-99 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.7E-26 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Gene3D G3DSA:1.10.8.60 343 547 3.0E-44 T 28-03-2018 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 SMART SM01086 766 855 1.8E-36 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 9.2E-13 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 5.0E-10 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 2.2E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 SUPERFAMILY SSF81923 4 156 7.06E-41 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 SUPERFAMILY SSF52540 546 852 4.06E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Gene3D G3DSA:1.10.1780.10 1 151 8.1E-31 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 4.7E-56 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS14695 b7704220f49cd5fa6654d8e16c6019f2 857 Gene3D G3DSA:3.40.50.300 157 342 7.8E-25 T 28-03-2018 DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 SMART SM01011 1 136 1.4E-55 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 372 384 8.1E-6 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 254 270 8.1E-6 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 Gene3D G3DSA:3.40.350.10 1 172 9.4E-44 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 Pfam PF00557 Metallopeptidase family M24 183 413 3.4E-66 T 28-03-2018 IPR000994 Peptidase M24 DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 SUPERFAMILY SSF55920 176 435 2.22E-86 T 28-03-2018 IPR000994 Peptidase M24 DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 1.0E-33 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 SUPERFAMILY SSF53092 1 175 4.39E-50 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal DDI_RS01195 24cfcdd8917cc4f8791f65f08d0143c7 442 Gene3D G3DSA:3.90.230.10 173 440 1.4E-87 T 28-03-2018 DDI_RS17820 0ea8778e3f2548b3b10c174a6ec1987e 548 Pfam PF01895 PhoU domain 340 421 1.1E-7 T 28-03-2018 IPR026022 PhoU domain DDI_RS17820 0ea8778e3f2548b3b10c174a6ec1987e 548 SUPERFAMILY SSF109755 321 531 2.3E-24 T 28-03-2018 DDI_RS17820 0ea8778e3f2548b3b10c174a6ec1987e 548 Gene3D G3DSA:1.20.58.220 322 424 3.8E-13 T 28-03-2018 DDI_RS17820 0ea8778e3f2548b3b10c174a6ec1987e 548 Pfam PF02690 Na+/Pi-cotransporter 13 147 1.1E-35 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DDI_RS17820 0ea8778e3f2548b3b10c174a6ec1987e 548 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 7.1E-123 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DDI_RS17820 0ea8778e3f2548b3b10c174a6ec1987e 548 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 306 4.1E-106 T 28-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 DDI_RS17820 0ea8778e3f2548b3b10c174a6ec1987e 548 Gene3D G3DSA:1.20.58.220 439 546 1.8E-8 T 28-03-2018 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 3.7E-35 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 SUPERFAMILY SSF51569 1 291 1.08E-98 T 28-03-2018 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.648 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 4.8E-251 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 SMART SM00917 369 500 1.1E-36 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 Pfam PF00682 HMGL-like 4 273 2.6E-104 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 SUPERFAMILY SSF110921 394 499 4.97E-25 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS16800 1f78737faf4b977bb89c5525e20788d6 524 Gene3D G3DSA:3.20.20.70 1 331 3.6E-110 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 432 1.8E-135 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 SUPERFAMILY SSF52518 7 184 8.34E-32 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 131 5.9E-26 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 PIRSF PIRSF004983 1 558 4.0E-168 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 SUPERFAMILY SSF52518 366 548 3.33E-30 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 Gene3D G3DSA:3.40.50.970 1 205 6.5E-53 T 28-03-2018 DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 390 7.2E-77 T 28-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 Gene3D G3DSA:3.40.50.970 357 558 2.7E-28 T 28-03-2018 DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 Gene3D G3DSA:3.40.50.1220 219 356 2.2E-14 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 424 537 1.1E-7 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS04565 ea90d92117410a1c399c5498ea2b4e8d 558 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 555 32.312 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DDI_RS04420 88bba01950edccd6ac8d0fb0b73162d0 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 178 3.2E-72 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DDI_RS04420 88bba01950edccd6ac8d0fb0b73162d0 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 10 179 38.373 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DDI_RS04420 88bba01950edccd6ac8d0fb0b73162d0 182 Pfam PF00156 Phosphoribosyl transferase domain 30 152 8.4E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDI_RS04420 88bba01950edccd6ac8d0fb0b73162d0 182 SUPERFAMILY SSF53271 12 179 1.88E-51 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS04420 88bba01950edccd6ac8d0fb0b73162d0 182 Gene3D G3DSA:3.40.50.2020 3 180 3.1E-40 T 28-03-2018 DDI_RS00680 d4836c13151ccbd0ea24b796a384ec41 241 Gene3D G3DSA:3.40.50.300 1 122 9.6E-15 T 28-03-2018 DDI_RS00680 d4836c13151ccbd0ea24b796a384ec41 241 SUPERFAMILY SSF52540 6 125 8.52E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00680 d4836c13151ccbd0ea24b796a384ec41 241 Pfam PF01745 Isopentenyl transferase 7 235 5.9E-82 T 28-03-2018 IPR002648 Adenylate dimethylallyltransferase GO:0004161|GO:0009058 KEGG: 00908+2.5.1.27|MetaCyc: PWY-2681 DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 Gene3D G3DSA:3.40.190.10 90 178 3.4E-22 T 28-03-2018 DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 SUPERFAMILY SSF53850 90 297 3.89E-34 T 28-03-2018 DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 Gene3D G3DSA:3.40.190.10 179 264 5.7E-11 T 28-03-2018 DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 SUPERFAMILY SSF46785 4 111 2.72E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 Pfam PF03466 LysR substrate binding domain 89 294 5.0E-32 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 8.2E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS01075 bb76df69a75c770ed0c7933e7c633315 310 Gene3D G3DSA:1.10.10.10 1 83 4.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12375 079fc059fa90d50206590c34b9b56512 182 PIRSF PIRSF000847 1 181 2.4E-43 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DDI_RS12375 079fc059fa90d50206590c34b9b56512 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 3.5E-17 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DDI_RS12375 079fc059fa90d50206590c34b9b56512 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 1.5E-63 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DDI_RS12375 079fc059fa90d50206590c34b9b56512 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DDI_RS12375 079fc059fa90d50206590c34b9b56512 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 33.665 T 28-03-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DDI_RS18370 674fb7a75f2e05adb007e4d7ab773440 350 Pfam PF05036 Sporulation related domain 266 339 9.4E-10 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS18370 674fb7a75f2e05adb007e4d7ab773440 350 Hamap MF_02021 Cell division protein DamX [damX]. 1 350 24.895 T 28-03-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 DDI_RS02135 7341ddff9ad6670ad1c641797156df8a 161 Pfam PF02576 RimP N-terminal domain 23 93 4.9E-29 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DDI_RS02135 7341ddff9ad6670ad1c641797156df8a 161 Gene3D G3DSA:2.30.30.180 98 158 3.7E-17 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DDI_RS02135 7341ddff9ad6670ad1c641797156df8a 161 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 17 161 24.633 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DDI_RS02135 7341ddff9ad6670ad1c641797156df8a 161 SUPERFAMILY SSF74942 94 161 1.96E-16 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DDI_RS02135 7341ddff9ad6670ad1c641797156df8a 161 Gene3D G3DSA:3.30.300.70 10 90 1.7E-28 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DDI_RS02135 7341ddff9ad6670ad1c641797156df8a 161 SUPERFAMILY SSF75420 12 93 1.7E-25 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DDI_RS02135 7341ddff9ad6670ad1c641797156df8a 161 Pfam PF17384 RimP C-terminal SH3 domain 96 161 8.6E-21 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DDI_RS08135 3e530f3c95aa29fc1fde7e5188620432 291 SMART SM00849 36 221 1.4E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS08135 3e530f3c95aa29fc1fde7e5188620432 291 SUPERFAMILY SSF56281 22 249 5.88E-41 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS08135 3e530f3c95aa29fc1fde7e5188620432 291 Gene3D G3DSA:3.60.15.10 15 251 4.2E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS08135 3e530f3c95aa29fc1fde7e5188620432 291 Pfam PF00753 Metallo-beta-lactamase superfamily 36 221 1.6E-8 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS08325 e2c74446141d60271132a893edd2ffcb 476 PIRSF PIRSF000977 2 476 4.7E-208 T 28-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 DDI_RS08325 e2c74446141d60271132a893edd2ffcb 476 Gene3D G3DSA:3.30.420.10 1 200 6.1E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS08325 e2c74446141d60271132a893edd2ffcb 476 SUPERFAMILY SSF53098 9 474 7.29E-138 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS08325 e2c74446141d60271132a893edd2ffcb 476 Pfam PF08411 Exonuclease C-terminal 211 473 4.0E-111 T 28-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 DDI_RS08325 e2c74446141d60271132a893edd2ffcb 476 SMART SM00479 9 202 7.7E-4 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDI_RS08325 e2c74446141d60271132a893edd2ffcb 476 Pfam PF00929 Exonuclease 12 191 6.1E-28 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDI_RS09300 f26b392576f2d6889b485ca4718df03f 308 Gene3D G3DSA:3.50.14.10 7 186 5.7E-55 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 DDI_RS09300 f26b392576f2d6889b485ca4718df03f 308 SUPERFAMILY SSF56596 6 304 3.53E-111 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 DDI_RS09300 f26b392576f2d6889b485ca4718df03f 308 Gene3D G3DSA:3.30.54.10 187 246 2.5E-29 T 28-03-2018 DDI_RS09300 f26b392576f2d6889b485ca4718df03f 308 Gene3D G3DSA:3.30.54.10 262 305 5.7E-9 T 28-03-2018 DDI_RS09300 f26b392576f2d6889b485ca4718df03f 308 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 305 3.3E-149 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 DDI_RS09300 f26b392576f2d6889b485ca4718df03f 308 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 303 6.0E-137 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 DDI_RS03225 4ea8a59e1a82239850be4fb220b73010 280 Gene3D G3DSA:3.30.1130.10 18 131 1.1E-36 T 28-03-2018 DDI_RS03225 4ea8a59e1a82239850be4fb220b73010 280 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 18 128 5.0E-45 T 28-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDI_RS03225 4ea8a59e1a82239850be4fb220b73010 280 TIGRFAM TIGR03138 QueF: queuine synthase 10 280 2.4E-116 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDI_RS03225 4ea8a59e1a82239850be4fb220b73010 280 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 280 143.265 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDI_RS03225 4ea8a59e1a82239850be4fb220b73010 280 Pfam PF14489 QueF-like protein 194 268 2.4E-27 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDI_RS03225 4ea8a59e1a82239850be4fb220b73010 280 Gene3D G3DSA:3.30.1130.10 141 280 1.6E-45 T 28-03-2018 DDI_RS03225 4ea8a59e1a82239850be4fb220b73010 280 PIRSF PIRSF004750 4 280 2.7E-114 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDI_RS03225 4ea8a59e1a82239850be4fb220b73010 280 SUPERFAMILY SSF55620 185 264 1.41E-9 T 28-03-2018 DDI_RS09445 ba015427898ee75471759a05794cbf19 839 PIRSF PIRSF034586 460 839 1.1E-124 T 28-03-2018 IPR017030 Virulence effector, SrfC DDI_RS09445 ba015427898ee75471759a05794cbf19 839 PIRSF PIRSF034586 4 465 7.5E-171 T 28-03-2018 IPR017030 Virulence effector, SrfC DDI_RS09445 ba015427898ee75471759a05794cbf19 839 Pfam PF10139 Putative bacterial virulence factor 462 831 4.8E-79 T 28-03-2018 IPR017030 Virulence effector, SrfC DDI_RS09445 ba015427898ee75471759a05794cbf19 839 Pfam PF10139 Putative bacterial virulence factor 27 461 1.0E-132 T 28-03-2018 IPR017030 Virulence effector, SrfC DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 Pfam PF00005 ABC transporter 24 173 8.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 Pfam PF00005 ABC transporter 276 433 7.6E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 SUPERFAMILY SSF52540 7 227 6.66E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 SMART SM00382 33 221 1.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 SMART SM00382 285 482 1.8E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 SUPERFAMILY SSF52540 248 493 2.41E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 Gene3D G3DSA:3.40.50.300 256 496 1.1E-37 T 28-03-2018 DDI_RS01005 db4b2b39c4aa3cd94ee7c8eabb164e57 505 Gene3D G3DSA:3.40.50.300 5 233 7.7E-55 T 28-03-2018 DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 Gene3D G3DSA:3.40.190.10 90 179 9.1E-18 T 28-03-2018 DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 SUPERFAMILY SSF46785 4 88 3.74E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 Pfam PF03466 LysR substrate binding domain 90 294 2.8E-43 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 SUPERFAMILY SSF53850 92 296 9.53E-38 T 28-03-2018 DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 Gene3D G3DSA:3.40.190.10 180 272 1.7E-22 T 28-03-2018 DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.5E-24 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 Gene3D G3DSA:1.10.10.10 1 85 4.3E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS09310 d15639852edd0f50fcfe0ad57338b26a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.88 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 SUPERFAMILY SSF52540 151 342 1.5E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 Pfam PF01018 GTP1/OBG 4 156 2.8E-60 T 28-03-2018 IPR006169 GTP1/OBG domain DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.1E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 Gene3D G3DSA:3.40.50.300 159 383 3.1E-31 T 28-03-2018 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 7.3E-150 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 SUPERFAMILY SSF82051 2 157 4.19E-58 T 28-03-2018 IPR006169 GTP1/OBG domain DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 Gene3D G3DSA:2.70.210.12 2 156 7.3E-60 T 28-03-2018 IPR006169 GTP1/OBG domain DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 PIRSF PIRSF002401 1 378 1.7E-141 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS02080 49ca2ffc79d0291091122350dd170a75 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 28-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DDI_RS20160 4bf81942de50aeb596ffae96554ed68b 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 292 1.9E-84 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DDI_RS20160 4bf81942de50aeb596ffae96554ed68b 295 Gene3D G3DSA:1.10.3720.10 15 287 5.4E-36 T 28-03-2018 DDI_RS20160 4bf81942de50aeb596ffae96554ed68b 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 9.1E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20160 4bf81942de50aeb596ffae96554ed68b 295 SUPERFAMILY SSF161098 37 285 7.98E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 1.2E-33 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 SUPERFAMILY SSF53738 4 177 2.08E-40 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 Gene3D G3DSA:3.30.310.50 379 457 8.3E-13 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 SUPERFAMILY SSF53738 264 369 1.41E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 SUPERFAMILY SSF55957 375 456 2.09E-15 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 Gene3D G3DSA:3.40.120.10 269 378 7.5E-27 T 28-03-2018 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 257 1.0E-20 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 454 1.3E-10 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 6.6E-30 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 6.6E-30 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 223 6.6E-30 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 6.6E-30 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 Gene3D G3DSA:3.40.120.10 164 268 7.3E-31 T 28-03-2018 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 Gene3D G3DSA:3.40.120.10 1 163 3.9E-41 T 28-03-2018 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 SUPERFAMILY SSF53738 153 262 1.41E-26 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS17320 c17990fdd49760b3435ad6b2046b3aa9 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 372 6.5E-24 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS08920 0d6d7c5229a7c835d70c03dd5b84531a 138 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 136 1.7E-56 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DDI_RS08920 0d6d7c5229a7c835d70c03dd5b84531a 138 Pfam PF01641 SelR domain 12 128 7.3E-52 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DDI_RS08920 0d6d7c5229a7c835d70c03dd5b84531a 138 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 4 130 35.778 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DDI_RS08920 0d6d7c5229a7c835d70c03dd5b84531a 138 SUPERFAMILY SSF51316 8 134 1.41E-55 T 28-03-2018 IPR011057 Mss4-like DDI_RS08920 0d6d7c5229a7c835d70c03dd5b84531a 138 Gene3D G3DSA:2.170.150.20 1 138 5.5E-55 T 28-03-2018 DDI_RS02425 2b08b3f8d59c273d1180c12fe578d461 211 SUPERFAMILY SSF53041 5 160 7.32E-30 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DDI_RS02425 2b08b3f8d59c273d1180c12fe578d461 211 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DDI_RS02425 2b08b3f8d59c273d1180c12fe578d461 211 Gene3D G3DSA:3.40.50.1390 1 155 3.9E-37 T 28-03-2018 DDI_RS02425 2b08b3f8d59c273d1180c12fe578d461 211 Gene3D G3DSA:1.10.10.60 156 191 3.4E-6 T 28-03-2018 DDI_RS02425 2b08b3f8d59c273d1180c12fe578d461 211 ProSitePatterns PS00398 Site-specific recombinases signature 2. 64 76 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DDI_RS02425 2b08b3f8d59c273d1180c12fe578d461 211 Pfam PF00239 Resolvase, N terminal domain 5 160 2.0E-28 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DDI_RS02425 2b08b3f8d59c273d1180c12fe578d461 211 Gene3D G3DSA:1.10.1220.10 192 202 3.8E-4 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS02425 2b08b3f8d59c273d1180c12fe578d461 211 SMART SM00857 5 160 4.5E-41 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DDI_RS16320 5b98a8ff0ff91bca6debdac9528eb39f 333 Pfam PF01867 CRISPR associated protein Cas1 38 273 2.1E-8 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS16320 5b98a8ff0ff91bca6debdac9528eb39f 333 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 20 320 4.1E-67 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS16320 5b98a8ff0ff91bca6debdac9528eb39f 333 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 13 319 1.2E-154 T 28-03-2018 IPR019857 CRISPR-associated protein Cas1, YPEST subtype GO:0004520|GO:0043571|GO:0046872 DDI_RS16320 5b98a8ff0ff91bca6debdac9528eb39f 333 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 17 326 15.683 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS10235 98a2f8bb32cec4a5e0a548744a03813e 132 PIRSF PIRSF037087 1 132 2.8E-61 T 28-03-2018 IPR017102 Uncharacterised conserved protein UCP037087 DDI_RS10235 98a2f8bb32cec4a5e0a548744a03813e 132 Gene3D G3DSA:2.60.120.10 1 132 4.9E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS10235 98a2f8bb32cec4a5e0a548744a03813e 132 Pfam PF07883 Cupin domain 41 110 1.5E-12 T 28-03-2018 IPR013096 Cupin 2, conserved barrel DDI_RS10235 98a2f8bb32cec4a5e0a548744a03813e 132 SUPERFAMILY SSF51182 23 124 2.38E-21 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 SUPERFAMILY SSF52518 385 565 5.71E-39 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 SUPERFAMILY SSF52518 22 192 3.78E-43 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 214 346 1.6E-33 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 SUPERFAMILY SSF52467 208 373 1.02E-39 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 423 556 9.7E-22 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 23 189 3.1E-45 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 20 575 2.9E-293 T 28-03-2018 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696 DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 Gene3D G3DSA:3.40.50.1220 204 363 4.0E-36 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 Gene3D G3DSA:3.40.50.970 364 570 1.3E-34 T 28-03-2018 DDI_RS20445 2af3b06598c2ac2e6801fe7bc45d80f1 581 Gene3D G3DSA:3.40.50.970 11 200 2.5E-39 T 28-03-2018 DDI_RS11135 70916a8b971c3741c177a58e6a93b8b2 252 SMART SM00934 24 245 9.3E-100 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS11135 70916a8b971c3741c177a58e6a93b8b2 252 Gene3D G3DSA:3.20.20.70 20 250 7.8E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS11135 70916a8b971c3741c177a58e6a93b8b2 252 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 23 244 2.0E-52 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS11135 70916a8b971c3741c177a58e6a93b8b2 252 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 26 245 3.7E-56 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS11135 70916a8b971c3741c177a58e6a93b8b2 252 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 22 250 40.291 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS11135 70916a8b971c3741c177a58e6a93b8b2 252 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 76 89 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS11135 70916a8b971c3741c177a58e6a93b8b2 252 SUPERFAMILY SSF51366 23 248 1.39E-78 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 SUPERFAMILY SSF75138 229 352 5.1E-26 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 SUPERFAMILY SSF52540 4 240 3.4E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 Gene3D G3DSA:3.40.50.10750 529 682 4.7E-65 T 28-03-2018 DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 SUPERFAMILY SSF53659 392 709 1.81E-94 T 28-03-2018 DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 Gene3D G3DSA:3.40.50.300 1 230 4.1E-26 T 28-03-2018 DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 Pfam PF07085 DRTGG domain 233 344 4.0E-30 T 28-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 Pfam PF13500 AAA domain 5 229 1.5E-49 T 28-03-2018 DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 1.1E-136 T 28-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 Gene3D G3DSA:3.40.1390.20 231 366 4.8E-29 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 PIRSF PIRSF006107 1 713 0.0 T 28-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDI_RS12770 3554aacf5da388cbaf249ac4641abe4c 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 7.3E-129 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDI_RS21150 c3fb9bb244d0c1e5a986315815ab9c46 350 Gene3D G3DSA:3.40.50.2000 163 347 8.9E-44 T 28-03-2018 DDI_RS21150 c3fb9bb244d0c1e5a986315815ab9c46 350 SUPERFAMILY SSF53756 1 343 8.06E-96 T 28-03-2018 DDI_RS21150 c3fb9bb244d0c1e5a986315815ab9c46 350 Gene3D G3DSA:3.40.50.2000 1 158 2.7E-30 T 28-03-2018 DDI_RS21150 c3fb9bb244d0c1e5a986315815ab9c46 350 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 6.7E-162 T 28-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 DDI_RS21150 c3fb9bb244d0c1e5a986315815ab9c46 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 323 2.3E-78 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 DDI_RS03705 9c24672b91ba53fbeadf2af3e41b8a87 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-62 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 DDI_RS03705 9c24672b91ba53fbeadf2af3e41b8a87 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 1.5E-54 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 DDI_RS03705 9c24672b91ba53fbeadf2af3e41b8a87 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.155 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 SUPERFAMILY SSF47781 469 557 4.89E-28 T 28-03-2018 IPR010994 RuvA domain 2-like DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Gene3D G3DSA:1.10.3500.10 102 358 7.7E-79 T 28-03-2018 IPR023323 Tex-like domain DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Gene3D G3DSA:1.10.10.650 2 101 1.4E-35 T 28-03-2018 IPR023319 Tex-like protein, HTH domain DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 SUPERFAMILY SSF158832 3 321 7.32E-121 T 28-03-2018 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Pfam PF16921 Tex protein YqgF-like domain 327 450 2.5E-48 T 28-03-2018 IPR032639 Tex protein, YqgF-like domain DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 SUPERFAMILY SSF53098 322 468 2.88E-47 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Gene3D G3DSA:1.10.150.310 498 629 5.5E-44 T 28-03-2018 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 SUPERFAMILY SSF50249 636 721 8.95E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Pfam PF00575 S1 RNA binding domain 650 719 4.7E-23 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Gene3D G3DSA:2.40.50.140 651 756 1.5E-25 T 28-03-2018 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 SMART SM00732 326 423 5.1E-35 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Gene3D G3DSA:1.10.3500.10 359 497 9.7E-37 T 28-03-2018 IPR023323 Tex-like domain DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Pfam PF12836 Helix-hairpin-helix motif 490 554 1.9E-27 T 28-03-2018 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 SMART SM00316 648 719 1.6E-25 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 SUPERFAMILY SSF47781 559 631 2.89E-20 T 28-03-2018 IPR010994 RuvA domain 2-like DDI_RS18475 0381a52f616e907af9d0791407c44bee 778 Pfam PF09371 Tex-like protein N-terminal domain 9 193 2.0E-70 T 28-03-2018 IPR018974 Tex-like protein, N-terminal DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 Pfam PF03552 Cellulose synthase 302 522 1.0E-8 T 28-03-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 3 672 3.1E-266 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 SUPERFAMILY SSF53448 129 408 5.06E-45 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 SUPERFAMILY SSF141371 552 644 5.89E-9 T 28-03-2018 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 Pfam PF07238 PilZ domain 550 644 1.3E-9 T 28-03-2018 IPR009875 PilZ domain GO:0035438 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 Pfam PF00535 Glycosyl transferase family 2 130 301 3.5E-34 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 136 155 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 407 426 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 487 511 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 523 544 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 217 241 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 447 466 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 53 73 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 81 106 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 PRINTS PR01439 Cellulose synthase subunit A signature 378 404 5.6E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 Gene3D G3DSA:2.40.10.220 547 654 9.2E-16 T 28-03-2018 DDI_RS19480 036a182f61cc1d82ee4419bec99a6b6f 696 Gene3D G3DSA:3.90.550.10 127 364 4.6E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS01675 e00947362792abf7f5c06d20fc9db0df 496 SMART SM00858 11 82 1.8E-13 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DDI_RS01675 e00947362792abf7f5c06d20fc9db0df 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 109 495 1.5E-157 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 DDI_RS01675 e00947362792abf7f5c06d20fc9db0df 496 Pfam PF08666 SAF domain 11 80 2.7E-12 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DDI_RS13170 bd8f86ed02f726cb21c5e610ad38b772 272 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 17 268 1.2E-106 T 28-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 DDI_RS13170 bd8f86ed02f726cb21c5e610ad38b772 272 SUPERFAMILY SSF50156 184 267 9.38E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS13170 bd8f86ed02f726cb21c5e610ad38b772 272 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 206 232 - T 28-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 DDI_RS13170 bd8f86ed02f726cb21c5e610ad38b772 272 Pfam PF11356 Type II secretion system protein C 21 154 5.6E-25 T 28-03-2018 IPR024961 Type II secretion system protein C, N-terminal DDI_RS13170 bd8f86ed02f726cb21c5e610ad38b772 272 Gene3D G3DSA:2.30.42.10 124 268 4.7E-7 T 28-03-2018 DDI_RS13170 bd8f86ed02f726cb21c5e610ad38b772 272 PRINTS PR00810 Bacterial general secretion pathway protein C signature 222 232 4.6E-7 T 28-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 DDI_RS13170 bd8f86ed02f726cb21c5e610ad38b772 272 PRINTS PR00810 Bacterial general secretion pathway protein C signature 93 102 4.6E-7 T 28-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 21 677 1.7E-263 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Pfam PF14520 Helix-hairpin-helix domain 456 511 2.7E-5 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Gene3D G3DSA:3.30.1490.70 253 331 5.1E-23 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Pfam PF12826 Helix-hairpin-helix motif 520 583 4.1E-22 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 PIRSF PIRSF001604 5 682 6.1E-249 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 417 444 9.7E-11 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Gene3D G3DSA:1.10.287.610 4 77 1.9E-23 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 125 154 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Gene3D G3DSA:2.40.50.140 332 400 2.5E-34 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SUPERFAMILY SSF47781 413 592 6.3E-59 T 28-03-2018 IPR010994 RuvA domain 2-like DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 341 356 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Hamap MF_01588 DNA ligase [ligA]. 12 681 52.763 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Gene3D G3DSA:3.40.50.10190 582 681 1.6E-24 T 28-03-2018 IPR001357 BRCT domain DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 332 408 2.3E-35 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SMART SM00292 607 682 1.6E-11 T 28-03-2018 IPR001357 BRCT domain DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SUPERFAMILY SSF50249 328 410 3.94E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Gene3D G3DSA:1.10.150.20 516 581 1.5E-23 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SUPERFAMILY SSF52113 606 680 7.1E-19 T 28-03-2018 IPR001357 BRCT domain DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Gene3D G3DSA:3.30.470.30 129 252 6.5E-53 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Gene3D G3DSA:1.10.150.20 442 515 1.2E-24 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 608 680 3.4E-13 T 28-03-2018 IPR001357 BRCT domain DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SUPERFAMILY SSF56091 12 326 7.2E-117 T 28-03-2018 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SMART SM00532 13 458 6.3E-271 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SMART SM00278 554 573 430.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SMART SM00278 456 475 31.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SMART SM00278 490 509 3.4 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 SMART SM00278 522 541 200.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDI_RS15590 3205345ca97b74e44a6e765ff63c60e1 682 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 14 328 2.4E-133 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DDI_RS00660 5f23a61914dbe97804560424205d66c6 479 PIRSF PIRSF005522 1 478 1.5E-234 T 28-03-2018 IPR016450 Uncharacterised conserved protein UCP005522 DDI_RS00660 5f23a61914dbe97804560424205d66c6 479 Gene3D G3DSA:3.30.470.20 340 468 9.1E-5 T 28-03-2018 DDI_RS00660 5f23a61914dbe97804560424205d66c6 479 SUPERFAMILY SSF56059 321 466 1.01E-64 T 28-03-2018 DDI_RS00660 5f23a61914dbe97804560424205d66c6 479 SUPERFAMILY SSF56059 21 216 1.01E-64 T 28-03-2018 DDI_RS00660 5f23a61914dbe97804560424205d66c6 479 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 451 5.6E-160 T 28-03-2018 IPR025841 Circularly permuted ATP-grasp type 2 DDI_RS00005 72800ee77bb144ee6a5ed9f96ae9ea9d 253 SUPERFAMILY SSF52540 13 247 1.43E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00005 72800ee77bb144ee6a5ed9f96ae9ea9d 253 SMART SM00382 38 225 1.1E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS00005 72800ee77bb144ee6a5ed9f96ae9ea9d 253 Pfam PF00005 ABC transporter 29 177 2.1E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS00005 72800ee77bb144ee6a5ed9f96ae9ea9d 253 PIRSF PIRSF039085 10 253 2.8E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS00005 72800ee77bb144ee6a5ed9f96ae9ea9d 253 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS00005 72800ee77bb144ee6a5ed9f96ae9ea9d 253 Gene3D G3DSA:3.40.50.300 10 253 5.8E-73 T 28-03-2018 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 Gene3D G3DSA:2.40.50.100 56 333 2.7E-18 T 28-03-2018 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 SUPERFAMILY SSF111369 241 348 7.59E-5 T 28-03-2018 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 ProSitePatterns PS00543 HlyD family secretion proteins signature. 409 431 - T 28-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 401 1.5E-19 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 3.1E-65 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 342 366 3.1E-65 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 409 424 3.1E-65 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 444 3.1E-65 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 309 330 3.1E-65 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 3.1E-65 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 389 3.1E-65 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS09415 a02c99115b5a137a452197ccbdb4d0fd 445 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 24 445 6.0E-119 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DDI_RS01710 3877ec0dc2bddce60fcf10bcbdb0f1b1 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 499 3.5E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS01710 3877ec0dc2bddce60fcf10bcbdb0f1b1 504 Pfam PF05231 MASE1 17 276 1.2E-11 T 28-03-2018 IPR007895 MASE1 DDI_RS01710 3877ec0dc2bddce60fcf10bcbdb0f1b1 504 Gene3D G3DSA:3.30.565.10 275 499 4.9E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS01710 3877ec0dc2bddce60fcf10bcbdb0f1b1 504 SUPERFAMILY SSF55874 380 498 4.93E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS01710 3877ec0dc2bddce60fcf10bcbdb0f1b1 504 SMART SM00387 410 500 6.0E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS01710 3877ec0dc2bddce60fcf10bcbdb0f1b1 504 Pfam PF07730 Histidine kinase 306 371 2.6E-13 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 4.7E-29 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.93 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.6E-30 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 SUPERFAMILY SSF54768 9 75 1.15E-23 T 28-03-2018 DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 Gene3D G3DSA:3.30.160.20 10 72 1.1E-27 T 28-03-2018 DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 Gene3D G3DSA:3.30.230.10 76 166 1.1E-34 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 SUPERFAMILY SSF54211 79 159 2.53E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.5E-71 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDI_RS18010 929deab4e8a8df7722fc14c918ad50e2 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 SUPERFAMILY SSF53335 10 49 1.8E-96 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 SUPERFAMILY SSF53335 88 544 1.8E-96 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 Gene3D G3DSA:3.40.50.150 200 496 1.5E-49 T 28-03-2018 DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 Pfam PF02384 N-6 DNA Methylase 180 497 1.9E-61 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 232 246 6.3E-20 T 28-03-2018 DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 351 375 6.3E-20 T 28-03-2018 DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 6.3E-20 T 28-03-2018 DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 306 318 6.3E-20 T 28-03-2018 DDI_RS02265 7c4eaa02738a8ecc989804714694895f 544 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 309 315 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 2.7E-14 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 176 730 1.3E-122 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 Gene3D G3DSA:1.10.274.10 199 304 7.4E-27 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 Gene3D G3DSA:3.30.450.40 1 178 1.3E-29 T 28-03-2018 IPR029016 GAF domain-like DDI_RS03570 59e94330e97af704937fcf8953e50507 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 706 3.7E-100 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 Gene3D G3DSA:3.50.30.10 305 419 6.3E-18 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 Gene3D G3DSA:3.20.20.60 420 739 2.6E-85 T 28-03-2018 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 Pfam PF01590 GAF domain 18 152 9.8E-17 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 SUPERFAMILY SSF51621 420 714 7.59E-95 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 SUPERFAMILY SSF52009 293 412 8.76E-24 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 SMART SM00065 17 164 1.3E-26 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.3E-23 T 28-03-2018 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.3E-23 T 28-03-2018 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.3E-23 T 28-03-2018 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.3E-23 T 28-03-2018 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 SUPERFAMILY SSF47831 204 309 3.53E-24 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 2.3E-21 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DDI_RS03570 59e94330e97af704937fcf8953e50507 748 SUPERFAMILY SSF55781 4 159 4.14E-30 T 28-03-2018 IPR029016 GAF domain-like DDI_RS08015 82bb961cc807ff14fae9a5be5233d28e 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 229 1.7E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS08015 82bb961cc807ff14fae9a5be5233d28e 238 Gene3D G3DSA:1.10.3720.10 1 236 2.1E-35 T 28-03-2018 DDI_RS08015 82bb961cc807ff14fae9a5be5233d28e 238 SUPERFAMILY SSF161098 7 216 1.44E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS08015 82bb961cc807ff14fae9a5be5233d28e 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 87 2.5E-12 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS13485 67b167e4962dc6dac5c142c95f188829 427 Pfam PF03222 Tryptophan/tyrosine permease family 29 390 2.0E-13 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DDI_RS13485 67b167e4962dc6dac5c142c95f188829 427 TIGRFAM TIGR00814 stp: serine transporter 17 416 6.8E-173 T 28-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS09115 ec29f990ed569555d4613c5da39dd0fd 396 PIRSF PIRSF001413 1 396 7.8E-171 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDI_RS09115 ec29f990ed569555d4613c5da39dd0fd 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 1.8E-52 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS09115 ec29f990ed569555d4613c5da39dd0fd 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 1.9E-191 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDI_RS09115 ec29f990ed569555d4613c5da39dd0fd 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDI_RS09115 ec29f990ed569555d4613c5da39dd0fd 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.794 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDI_RS09115 ec29f990ed569555d4613c5da39dd0fd 396 Gene3D G3DSA:3.40.50.1100 8 193 5.8E-45 T 28-03-2018 DDI_RS09115 ec29f990ed569555d4613c5da39dd0fd 396 SUPERFAMILY SSF53686 4 389 6.02E-145 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS09115 ec29f990ed569555d4613c5da39dd0fd 396 Gene3D G3DSA:3.40.50.1100 194 396 3.3E-38 T 28-03-2018 DDI_RS07840 8d7f72ea2b9feeb1b16d56b3f011188f 291 SUPERFAMILY SSF53850 84 288 1.03E-36 T 28-03-2018 DDI_RS07840 8d7f72ea2b9feeb1b16d56b3f011188f 291 Gene3D G3DSA:3.40.190.10 86 180 5.6E-15 T 28-03-2018 DDI_RS07840 8d7f72ea2b9feeb1b16d56b3f011188f 291 Gene3D G3DSA:3.40.190.10 181 258 7.7E-16 T 28-03-2018 DDI_RS07840 8d7f72ea2b9feeb1b16d56b3f011188f 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.1E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07840 8d7f72ea2b9feeb1b16d56b3f011188f 291 Gene3D G3DSA:1.10.10.10 1 85 4.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS07840 8d7f72ea2b9feeb1b16d56b3f011188f 291 Pfam PF03466 LysR substrate binding domain 85 282 8.8E-38 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS07840 8d7f72ea2b9feeb1b16d56b3f011188f 291 SUPERFAMILY SSF46785 1 108 8.71E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17375 569ed609fdbbe88a1ca52aba494d7619 231 Gene3D G3DSA:1.10.3720.10 2 231 6.0E-37 T 28-03-2018 DDI_RS17375 569ed609fdbbe88a1ca52aba494d7619 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 226 8.7E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17375 569ed609fdbbe88a1ca52aba494d7619 231 SUPERFAMILY SSF161098 16 211 2.49E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17375 569ed609fdbbe88a1ca52aba494d7619 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 120 1.2E-16 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS13685 ba1dbee6455794231564874b8e59aeb2 356 SUPERFAMILY SSF51658 8 323 1.05E-61 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS13685 ba1dbee6455794231564874b8e59aeb2 356 Pfam PF01261 Xylose isomerase-like TIM barrel 30 279 1.2E-37 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS13685 ba1dbee6455794231564874b8e59aeb2 356 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 1.3E-21 T 28-03-2018 IPR011418 AP endonuclease, family 2, C-terminal DDI_RS13685 ba1dbee6455794231564874b8e59aeb2 356 Gene3D G3DSA:3.20.20.150 6 351 6.3E-48 T 28-03-2018 DDI_RS14785 552c5c47c178e03de06af517fa14766a 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 2.7E-27 T 28-03-2018 IPR023214 HAD-like domain DDI_RS14785 552c5c47c178e03de06af517fa14766a 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 3.7E-58 T 28-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase DDI_RS14785 552c5c47c178e03de06af517fa14766a 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 183 2.2E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS14785 552c5c47c178e03de06af517fa14766a 188 SUPERFAMILY SSF56784 4 186 8.01E-44 T 28-03-2018 IPR023214 HAD-like domain DDI_RS14785 552c5c47c178e03de06af517fa14766a 188 Gene3D G3DSA:1.10.150.240 19 75 4.8E-13 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 DDI_RS14785 552c5c47c178e03de06af517fa14766a 188 Gene3D G3DSA:3.40.50.1000 76 188 3.1E-19 T 28-03-2018 IPR023214 HAD-like domain DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 SUPERFAMILY SSF52540 320 571 2.43E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 Gene3D G3DSA:3.40.50.300 317 623 7.0E-73 T 28-03-2018 DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 Gene3D G3DSA:3.40.50.300 19 315 4.9E-72 T 28-03-2018 DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 551 589 4.5E-9 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 257 294 2.6E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 SMART SM00382 356 549 1.1E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 SMART SM00382 51 255 1.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 Pfam PF00005 ABC transporter 42 205 1.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 Pfam PF00005 ABC transporter 348 499 2.3E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 SUPERFAMILY SSF52540 22 277 2.98E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS21035 d131a9c35cd1c454d2be1b570fd248b9 632 ProSitePatterns PS00211 ABC transporters family signature. 178 192 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.081 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 Gene3D G3DSA:3.30.70.1250 116 226 1.1E-49 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 SUPERFAMILY SSF53649 1 114 1.44E-70 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 SUPERFAMILY SSF53649 236 407 1.44E-70 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 PIRSF PIRSF001491 1 407 7.2E-161 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 7.8E-186 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 Pfam PF01676 Metalloenzyme superfamily 2 398 5.3E-43 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 Gene3D G3DSA:3.40.720.10 227 407 3.7E-18 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 DDI_RS02220 044838d8afd75ae1d7f350e045f89616 407 SUPERFAMILY SSF143856 117 235 6.54E-48 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 SUPERFAMILY SSF140490 336 428 9.68E-32 T 28-03-2018 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 SMART SM00928 339 384 7.3E-22 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 342 424 2.0E-26 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 55 227 2.2E-51 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 175 190 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 14 426 3.4E-201 T 28-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 352 363 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 Pfam PF10531 SLBB domain 256 288 4.4E-6 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 SUPERFAMILY SSF142019 11 245 6.93E-86 T 28-03-2018 DDI_RS12700 a687b2765f59c47a4f5584f696349d05 449 SUPERFAMILY SSF142984 251 333 4.71E-21 T 28-03-2018 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 9.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 9.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 9.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 SMART SM00448 2 115 4.5E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 Gene3D G3DSA:3.40.50.2300 1 126 6.5E-33 T 28-03-2018 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 SMART SM00421 146 203 1.1E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 SUPERFAMILY SSF52172 3 131 1.71E-32 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 7.9E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 SUPERFAMILY SSF46894 136 209 2.21E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 Gene3D G3DSA:1.10.10.10 127 213 1.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12385 cf6ca8c434069c2bfcb989ca820e7d7f 218 Pfam PF00072 Response regulator receiver domain 4 115 8.6E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 SMART SM00971 9 113 4.4E-62 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 Gene3D G3DSA:1.10.3130.10 1 134 2.1E-37 T 28-03-2018 DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 SUPERFAMILY SSF51161 8 260 9.56E-65 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 PIRSF PIRSF000441 8 63 440.0 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 PIRSF PIRSF000441 75 262 5.5E-59 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 2.4E-73 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.7E-38 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.3E-7 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS21185 ac71dd519a292b8d0124f9524b7cd600 273 Gene3D G3DSA:2.160.10.10 135 261 4.1E-28 T 28-03-2018 DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 28-03-2018 DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 SUPERFAMILY SSF52540 64 402 3.68E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 SMART SM00994 12 51 1.0E-24 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 Gene3D G3DSA:1.10.8.60 317 409 3.1E-32 T 28-03-2018 DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 2.8E-211 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 SMART SM01086 317 412 1.0E-33 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 393 1.0E-15 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 SMART SM00382 111 333 4.4E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 4.0E-48 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.2 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DDI_RS04285 c1194486cd206ff3be47c1ce70bc2755 424 Gene3D G3DSA:3.40.50.300 56 315 1.3E-68 T 28-03-2018 DDI_RS17855 b581d35551388ed4bf99bb7eb0e7eddd 435 PIRSF PIRSF001362 1 435 1.1E-225 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DDI_RS17855 b581d35551388ed4bf99bb7eb0e7eddd 435 SUPERFAMILY SSF51621 6 418 6.73E-154 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS17855 b581d35551388ed4bf99bb7eb0e7eddd 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 DDI_RS17855 b581d35551388ed4bf99bb7eb0e7eddd 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 1.2E-114 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DDI_RS17855 b581d35551388ed4bf99bb7eb0e7eddd 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 1.5E-89 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DDI_RS17855 b581d35551388ed4bf99bb7eb0e7eddd 435 Pfam PF00463 Isocitrate lyase family 257 435 6.0E-49 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DDI_RS17855 b581d35551388ed4bf99bb7eb0e7eddd 435 Pfam PF00463 Isocitrate lyase family 9 256 1.5E-58 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DDI_RS17855 b581d35551388ed4bf99bb7eb0e7eddd 435 Gene3D G3DSA:3.20.20.60 1 418 1.7E-152 T 28-03-2018 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 SMART SM00354 5 75 4.1E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 SUPERFAMILY SSF47413 5 60 2.34E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 Gene3D G3DSA:1.10.260.40 6 58 1.5E-19 T 28-03-2018 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 9.1E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 Pfam PF13377 Periplasmic binding protein-like domain 173 331 1.6E-44 T 28-03-2018 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 6.1E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 6.1E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 SUPERFAMILY SSF53822 65 333 1.18E-60 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 Gene3D G3DSA:3.40.50.2300 180 315 4.8E-47 T 28-03-2018 DDI_RS05800 cdb6c7c56b78d3be3237f89310e33000 357 Gene3D G3DSA:3.40.50.2300 59 179 8.0E-25 T 28-03-2018 DDI_RS17315 3fdddc77bec0bdf5bda67df8e4b50e5e 465 Pfam PF01050 Mannose-6-phosphate isomerase 316 464 3.0E-61 T 28-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 DDI_RS17315 3fdddc77bec0bdf5bda67df8e4b50e5e 465 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 464 8.6E-220 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 DDI_RS17315 3fdddc77bec0bdf5bda67df8e4b50e5e 465 SUPERFAMILY SSF51182 186 462 5.34E-82 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS17315 3fdddc77bec0bdf5bda67df8e4b50e5e 465 Gene3D G3DSA:2.60.120.10 340 455 2.7E-27 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS17315 3fdddc77bec0bdf5bda67df8e4b50e5e 465 Pfam PF00483 Nucleotidyl transferase 4 287 3.6E-76 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DDI_RS17315 3fdddc77bec0bdf5bda67df8e4b50e5e 465 Gene3D G3DSA:3.90.550.10 1 339 7.6E-98 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS17315 3fdddc77bec0bdf5bda67df8e4b50e5e 465 SUPERFAMILY SSF53448 2 283 1.53E-74 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 414 568 7.9E-55 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 Gene3D G3DSA:1.10.287.950 105 408 1.2E-14 T 28-03-2018 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 Gene3D G3DSA:1.10.287.950 409 605 7.0E-48 T 28-03-2018 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 Pfam PF00672 HAMP domain 301 349 5.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 296 2.6E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 558 2.6E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 481 510 2.6E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 404 2.6E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 479 2.6E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 SMART SM01358 33 279 2.1E-48 T 28-03-2018 IPR032255 Helical bimodular sensor domain DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 SMART SM00283 354 601 9.7E-93 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 SMART SM00304 301 353 8.7E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 Pfam PF16591 Helical bimodular sensor domain 49 274 8.1E-23 T 28-03-2018 IPR032255 Helical bimodular sensor domain DDI_RS20610 a3054168ea8f7e439057dc53ddea783f 628 SUPERFAMILY SSF58104 321 602 2.09E-74 T 28-03-2018 DDI_RS15465 4964a948455aa2a9c26e82b6ea600b23 406 Gene3D G3DSA:1.20.1250.20 202 405 4.2E-10 T 28-03-2018 DDI_RS15465 4964a948455aa2a9c26e82b6ea600b23 406 SUPERFAMILY SSF103473 13 396 1.03E-22 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS15465 4964a948455aa2a9c26e82b6ea600b23 406 Gene3D G3DSA:1.20.1250.20 8 191 5.8E-7 T 28-03-2018 DDI_RS15465 4964a948455aa2a9c26e82b6ea600b23 406 Pfam PF07690 Major Facilitator Superfamily 13 316 1.3E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS11410 1634fb5919177b595e853faab480defe 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DDI_RS11410 1634fb5919177b595e853faab480defe 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 1.8E-32 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DDI_RS11410 1634fb5919177b595e853faab480defe 123 SUPERFAMILY SSF89360 19 112 3.14E-27 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS11410 1634fb5919177b595e853faab480defe 123 Gene3D G3DSA:2.60.300.12 19 123 2.1E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS11410 1634fb5919177b595e853faab480defe 123 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 18 123 9.5E-43 T 28-03-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 DDI_RS11410 1634fb5919177b595e853faab480defe 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 3.5E-19 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS21310 ce9a06cfdf337b3d9a1cdbfb0c8f3f4a 174 Pfam PF00581 Rhodanese-like domain 92 165 4.3E-5 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS21310 ce9a06cfdf337b3d9a1cdbfb0c8f3f4a 174 Gene3D G3DSA:3.50.50.60 3 80 8.4E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS21310 ce9a06cfdf337b3d9a1cdbfb0c8f3f4a 174 SUPERFAMILY SSF51905 2 77 5.57E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS21310 ce9a06cfdf337b3d9a1cdbfb0c8f3f4a 174 SMART SM00450 79 174 9.5E-12 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS21310 ce9a06cfdf337b3d9a1cdbfb0c8f3f4a 174 Gene3D G3DSA:3.40.250.10 81 174 2.4E-16 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS21310 ce9a06cfdf337b3d9a1cdbfb0c8f3f4a 174 SUPERFAMILY SSF52821 93 170 9.56E-19 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 SUPERFAMILY SSF54862 186 287 7.53E-40 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 SUPERFAMILY SSF54862 2 156 7.53E-40 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.40.50.720 337 417 3.0E-16 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 SUPERFAMILY SSF51971 320 576 2.12E-65 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 185 646 7.7E-239 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.50.50.60 418 489 8.7E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.50.50.60 490 576 1.1E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 199 309 1.9E-35 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 323 635 2.6E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.50.50.60 579 666 2.8E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.30.70.20 1 19 0.076 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.30.70.20 71 98 1.6E-11 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.20.20.70 313 336 0.13 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Pfam PF13247 4Fe-4S dicluster domain 54 140 1.7E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.30.70.20 99 123 1.7E-9 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 PRINTS PR00419 Adrenodoxin reductase family signature 388 398 1.4E-34 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 PRINTS PR00419 Adrenodoxin reductase family signature 499 512 1.4E-34 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 PRINTS PR00419 Adrenodoxin reductase family signature 346 359 1.4E-34 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 PRINTS PR00419 Adrenodoxin reductase family signature 465 479 1.4E-34 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 PRINTS PR00419 Adrenodoxin reductase family signature 323 345 1.4E-34 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:1.10.1060.10 171 312 1.7E-39 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.30.70.20 124 168 0.024 T 28-03-2018 DDI_RS20215 a309ab8d67c1335b35ef5e42030e4e87 667 Gene3D G3DSA:3.30.70.20 20 70 1.4E-7 T 28-03-2018 DDI_RS00170 27b14de8bcdb82c6e0387143a9bb635f 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 22.22 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 DDI_RS00170 27b14de8bcdb82c6e0387143a9bb635f 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 2.9E-17 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 DDI_RS07345 894b5361b61727c8c4ee975ec03ed8c0 565 Pfam PF07081 Protein of unknown function (DUF1349) 418 564 1.0E-8 T 28-03-2018 IPR009784 Protein of unknown function DUF1349 DDI_RS07345 894b5361b61727c8c4ee975ec03ed8c0 565 Pfam PF00041 Fibronectin type III domain 271 366 1.1E-6 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 DDI_RS07345 894b5361b61727c8c4ee975ec03ed8c0 565 SUPERFAMILY SSF49899 439 564 1.58E-5 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain DDI_RS07345 894b5361b61727c8c4ee975ec03ed8c0 565 SUPERFAMILY SSF49265 262 377 5.75E-17 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 DDI_RS07345 894b5361b61727c8c4ee975ec03ed8c0 565 SMART SM00060 269 364 6.3E-8 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 DDI_RS07345 894b5361b61727c8c4ee975ec03ed8c0 565 Gene3D G3DSA:2.60.40.10 265 388 1.4E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS07345 894b5361b61727c8c4ee975ec03ed8c0 565 Gene3D G3DSA:2.60.120.200 389 565 2.5E-21 T 28-03-2018 DDI_RS05035 1c3e3f02ffbf80b6cca7430b4bb4c546 191 PIRSF PIRSF001296 1 190 1.1E-71 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 DDI_RS05035 1c3e3f02ffbf80b6cca7430b4bb4c546 191 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 187 33.086 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 DDI_RS05035 1c3e3f02ffbf80b6cca7430b4bb4c546 191 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 5 187 5.0E-71 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 DDI_RS05035 1c3e3f02ffbf80b6cca7430b4bb4c546 191 Pfam PF02669 K+-transporting ATPase, c chain 5 186 1.5E-67 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 DDI_RS15990 7fe39b7b6d1931ed6abef692a3e652d5 91 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 2.6E-24 T 28-03-2018 IPR014318 Phage shock protein, PspG DDI_RS15990 7fe39b7b6d1931ed6abef692a3e652d5 91 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 1.6E-25 T 28-03-2018 IPR014318 Phage shock protein, PspG DDI_RS20815 7b911a7ea1a521320170aa0447dc1dd2 514 Pfam PF00501 AMP-binding enzyme 22 410 2.0E-51 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS20815 7b911a7ea1a521320170aa0447dc1dd2 514 Gene3D G3DSA:3.40.50.980 12 166 3.1E-19 T 28-03-2018 DDI_RS20815 7b911a7ea1a521320170aa0447dc1dd2 514 Gene3D G3DSA:3.30.300.30 408 510 2.0E-17 T 28-03-2018 DDI_RS20815 7b911a7ea1a521320170aa0447dc1dd2 514 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS20815 7b911a7ea1a521320170aa0447dc1dd2 514 SUPERFAMILY SSF56801 20 504 1.7E-89 T 28-03-2018 DDI_RS20815 7b911a7ea1a521320170aa0447dc1dd2 514 Gene3D G3DSA:2.30.38.10 324 403 6.0E-11 T 28-03-2018 DDI_RS20815 7b911a7ea1a521320170aa0447dc1dd2 514 Gene3D G3DSA:3.40.50.980 167 323 5.7E-32 T 28-03-2018 DDI_RS18340 f3636ab635d06e56d462c278ef3c4010 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 186 2.0E-48 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 DDI_RS18340 f3636ab635d06e56d462c278ef3c4010 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DDI_RS18340 f3636ab635d06e56d462c278ef3c4010 190 SUPERFAMILY SSF50891 27 188 1.43E-56 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS18340 f3636ab635d06e56d462c278ef3c4010 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 8.6E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 DDI_RS18340 f3636ab635d06e56d462c278ef3c4010 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 8.6E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 DDI_RS18340 f3636ab635d06e56d462c278ef3c4010 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 8.6E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 DDI_RS18340 f3636ab635d06e56d462c278ef3c4010 190 Gene3D G3DSA:2.40.100.10 18 190 3.6E-51 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS18340 f3636ab635d06e56d462c278ef3c4010 190 PIRSF PIRSF001467 14 190 1.4E-27 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 5.0E-25 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 Gene3D G3DSA:3.30.930.10 11 460 1.3E-101 T 28-03-2018 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 SUPERFAMILY SSF55681 407 478 1.84E-106 T 28-03-2018 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 SUPERFAMILY SSF55681 10 237 1.84E-106 T 28-03-2018 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 5.1E-276 T 28-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 Gene3D G3DSA:3.40.50.800 461 571 1.0E-32 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 PIRSF PIRSF001535 1 572 5.7E-275 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 SUPERFAMILY SSF55826 218 390 3.66E-30 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 1.2E-46 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 Pfam PF03129 Anticodon binding domain 475 567 3.3E-22 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.705 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 SUPERFAMILY SSF52954 462 569 2.27E-34 T 28-03-2018 IPR004154 Anticodon-binding DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.5E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.5E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.5E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DDI_RS15385 0583fb6b93f72c201ba29ed628eedca3 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.5E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DDI_RS07780 fad908c33498e75f1524c50dafe93c03 341 Gene3D G3DSA:3.40.47.10 214 324 0.003 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS07780 fad908c33498e75f1524c50dafe93c03 341 Gene3D G3DSA:3.40.47.10 1 201 1.9E-24 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS07780 fad908c33498e75f1524c50dafe93c03 341 SUPERFAMILY SSF53901 1 188 1.04E-28 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS07780 fad908c33498e75f1524c50dafe93c03 341 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 115 189 1.6E-7 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDI_RS07780 fad908c33498e75f1524c50dafe93c03 341 SUPERFAMILY SSF53901 221 307 4.41E-6 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 851 1.8E-115 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 PIRSF PIRSF000111 1 866 0.0 T 28-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 Pfam PF00171 Aldehyde dehydrogenase family 5 399 8.4E-28 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 SUPERFAMILY SSF53720 6 453 6.68E-84 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 Gene3D G3DSA:3.40.50.1970 430 643 8.3E-52 T 28-03-2018 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 Gene3D G3DSA:3.40.309.10 230 403 5.3E-27 T 28-03-2018 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 Gene3D G3DSA:3.40.605.10 1 229 1.7E-32 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 SUPERFAMILY SSF56796 449 867 6.67E-119 T 28-03-2018 DDI_RS09010 74408107d9f2444bf9d669601735fada 900 Gene3D G3DSA:1.20.1090.10 644 868 8.5E-60 T 28-03-2018 DDI_RS17430 bb890469c62c79a7878b39a405544c4f 333 Gene3D G3DSA:3.20.20.30 3 330 1.2E-57 T 28-03-2018 DDI_RS17430 bb890469c62c79a7878b39a405544c4f 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 324 1.4E-100 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 DDI_RS17430 bb890469c62c79a7878b39a405544c4f 333 SUPERFAMILY SSF51679 4 324 7.2E-60 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS17430 bb890469c62c79a7878b39a405544c4f 333 Pfam PF00296 Luciferase-like monooxygenase 18 297 4.0E-28 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 SMART SM00474 3 171 2.4E-42 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 SUPERFAMILY SSF47819 296 371 5.23E-20 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 Pfam PF00570 HRDC domain 214 279 7.0E-14 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 SUPERFAMILY SSF47819 195 301 1.33E-26 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 Gene3D G3DSA:3.30.420.10 1 194 2.7E-39 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 369 5.2E-140 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 SMART SM00341 210 290 9.3E-15 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 Gene3D G3DSA:1.10.150.80 195 293 7.9E-18 T 28-03-2018 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 SUPERFAMILY SSF53098 2 210 1.04E-63 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 43.68 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DDI_RS09800 b34ade453333734ea00676b81eda5a86 373 Pfam PF01612 3'-5' exonuclease 3 169 1.5E-39 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DDI_RS13015 1ee442f199634e4b2979ee3af71b3068 269 PIRSF PIRSF019271 1 269 5.3E-95 T 28-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 DDI_RS13015 1ee442f199634e4b2979ee3af71b3068 269 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 23 239 1.8E-53 T 28-03-2018 IPR005519 Acid phosphatase, class B-like DDI_RS13015 1ee442f199634e4b2979ee3af71b3068 269 Gene3D G3DSA:3.40.50.1000 39 207 4.6E-22 T 28-03-2018 IPR023214 HAD-like domain DDI_RS13015 1ee442f199634e4b2979ee3af71b3068 269 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 3 266 4.3E-83 T 28-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 DDI_RS13015 1ee442f199634e4b2979ee3af71b3068 269 SUPERFAMILY SSF56784 52 246 7.41E-36 T 28-03-2018 IPR023214 HAD-like domain DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 Gene3D G3DSA:2.60.120.280 5 161 1.0E-17 T 28-03-2018 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 Gene3D G3DSA:1.10.10.60 164 226 7.9E-9 T 28-03-2018 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 SUPERFAMILY SSF46689 172 222 8.96E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 3.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 3.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 Gene3D G3DSA:1.10.10.60 227 276 2.3E-13 T 28-03-2018 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 Pfam PF02311 AraC-like ligand binding domain 21 150 5.3E-13 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 SUPERFAMILY SSF46689 225 275 1.25E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 SMART SM00342 189 272 9.4E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 Pfam PF12833 Helix-turn-helix domain 196 274 1.1E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 SUPERFAMILY SSF51215 18 156 2.88E-11 T 28-03-2018 DDI_RS00540 066474661b33b430bff9c3c3eb8f5812 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS14580 e82e5ba71a823f43ed8017e11d179561 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 254 4.6E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14580 e82e5ba71a823f43ed8017e11d179561 535 SUPERFAMILY SSF161098 281 531 6.0E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14580 e82e5ba71a823f43ed8017e11d179561 535 Gene3D G3DSA:1.10.3720.10 34 264 1.2E-24 T 28-03-2018 DDI_RS14580 e82e5ba71a823f43ed8017e11d179561 535 Gene3D G3DSA:1.10.3720.10 280 534 3.2E-6 T 28-03-2018 DDI_RS14580 e82e5ba71a823f43ed8017e11d179561 535 SUPERFAMILY SSF161098 6 260 3.92E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS04835 df8c9b2568d35f0229c2b24f6dc138d9 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 2.5E-47 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS04835 df8c9b2568d35f0229c2b24f6dc138d9 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.189 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS04835 df8c9b2568d35f0229c2b24f6dc138d9 156 PIRSF PIRSF004505 1 155 1.8E-41 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS04835 df8c9b2568d35f0229c2b24f6dc138d9 156 Gene3D G3DSA:3.40.1280.10 1 155 2.4E-50 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS04835 df8c9b2568d35f0229c2b24f6dc138d9 156 SUPERFAMILY SSF75217 1 154 1.47E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS04835 df8c9b2568d35f0229c2b24f6dc138d9 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.1E-80 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS14080 2ae1c7ee3a66373ade48d8f8b0591bdb 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 39.316 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 DDI_RS14080 2ae1c7ee3a66373ade48d8f8b0591bdb 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DDI_RS14080 2ae1c7ee3a66373ade48d8f8b0591bdb 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.1E-36 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DDI_RS14080 2ae1c7ee3a66373ade48d8f8b0591bdb 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.0E-24 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS14080 2ae1c7ee3a66373ade48d8f8b0591bdb 107 SUPERFAMILY SSF89360 1 95 3.27E-32 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS14080 2ae1c7ee3a66373ade48d8f8b0591bdb 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.0E-58 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 DDI_RS14080 2ae1c7ee3a66373ade48d8f8b0591bdb 107 Gene3D G3DSA:2.60.300.12 2 107 6.6E-37 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS07085 7fcbd9ff24c04d13ff94106ed90a193b 184 Gene3D G3DSA:3.40.50.360 1 184 8.1E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS07085 7fcbd9ff24c04d13ff94106ed90a193b 184 SUPERFAMILY SSF52218 1 183 3.93E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS07085 7fcbd9ff24c04d13ff94106ed90a193b 184 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DDI_RS07085 7fcbd9ff24c04d13ff94106ed90a193b 184 Pfam PF03358 NADPH-dependent FMN reductase 36 119 3.8E-10 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 SUPERFAMILY SSF52218 251 396 9.83E-35 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 SUPERFAMILY SSF57802 442 492 6.52E-18 T 28-03-2018 DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 Gene3D G3DSA:2.20.28.10 439 493 2.4E-20 T 28-03-2018 DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 SUPERFAMILY SSF56281 8 285 5.37E-47 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 Gene3D G3DSA:3.40.50.360 253 395 8.6E-20 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 SMART SM00849 34 209 6.8E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 PRINTS PR00163 Rubredoxin signature 473 489 7.6E-7 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 PRINTS PR00163 Rubredoxin signature 443 459 7.6E-7 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 Pfam PF00258 Flavodoxin 256 378 2.7E-11 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 493 81.186 T 28-03-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 Gene3D G3DSA:3.60.15.10 1 247 2.2E-38 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 Pfam PF00753 Metallo-beta-lactamase superfamily 34 171 1.5E-8 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 Pfam PF00301 Rubredoxin 443 489 7.5E-20 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 DDI_RS03105 d579b134992419d4d72fbf4ea93116d9 493 PIRSF PIRSF005243 1 400 3.8E-163 T 28-03-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 Gene3D G3DSA:3.30.450.40 184 390 4.1E-24 T 28-03-2018 IPR029016 GAF domain-like DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 Gene3D G3DSA:1.10.8.60 567 638 1.6E-22 T 28-03-2018 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 Gene3D G3DSA:1.10.10.60 639 713 8.9E-9 T 28-03-2018 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 Gene3D G3DSA:3.40.50.300 391 566 1.9E-28 T 28-03-2018 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 Gene3D G3DSA:3.30.450.40 11 183 1.3E-14 T 28-03-2018 IPR029016 GAF domain-like DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 SMART SM00382 414 558 3.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 Pfam PF00158 Sigma-54 interaction domain 394 560 1.0E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 607 616 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 SMART SM00065 209 362 1.2E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 SMART SM00065 11 181 0.22 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 SUPERFAMILY SSF46689 607 716 2.02E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 418 431 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 Pfam PF13185 GAF domain 209 353 1.6E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 SUPERFAMILY SSF55781 190 365 5.67E-19 T 28-03-2018 IPR029016 GAF domain-like DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 SUPERFAMILY SSF52540 393 630 3.42E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05830 36963688f0c2c6322e184f5992559f9b 725 SUPERFAMILY SSF55781 16 188 1.11E-13 T 28-03-2018 IPR029016 GAF domain-like DDI_RS19785 fd37a646282d1233dc61768f6f588896 313 Gene3D G3DSA:3.40.630.30 2 150 1.2E-23 T 28-03-2018 DDI_RS19785 fd37a646282d1233dc61768f6f588896 313 Gene3D G3DSA:3.10.129.10 151 300 2.4E-18 T 28-03-2018 DDI_RS19785 fd37a646282d1233dc61768f6f588896 313 Pfam PF00583 Acetyltransferase (GNAT) family 46 122 8.9E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS19785 fd37a646282d1233dc61768f6f588896 313 SUPERFAMILY SSF54637 155 297 9.03E-41 T 28-03-2018 IPR029069 HotDog domain DDI_RS19785 fd37a646282d1233dc61768f6f588896 313 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 1.9E-48 T 28-03-2018 IPR012660 Thioesterase, putative DDI_RS19785 fd37a646282d1233dc61768f6f588896 313 SUPERFAMILY SSF55729 2 168 1.06E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS19785 fd37a646282d1233dc61768f6f588896 313 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 1.4E-48 T 28-03-2018 IPR012660 Thioesterase, putative DDI_RS08355 67233c45fc92b4dc91e683d8bce9fc31 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.895 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 DDI_RS08355 67233c45fc92b4dc91e683d8bce9fc31 60 Gene3D G3DSA:2.20.25.10 8 60 1.2E-18 T 28-03-2018 DDI_RS08355 67233c45fc92b4dc91e683d8bce9fc31 60 Pfam PF03966 Trm112p-like protein 2 41 6.9E-9 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 DDI_RS08355 67233c45fc92b4dc91e683d8bce9fc31 60 SUPERFAMILY SSF158997 1 55 8.63E-20 T 28-03-2018 DDI_RS13935 6a5bbe648d5c1b77cacf1dfe7ec761b7 271 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 142 262 1.4E-36 T 28-03-2018 IPR012654 Conserved hypothetical protein CHP02391 DDI_RS13935 6a5bbe648d5c1b77cacf1dfe7ec761b7 271 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 142 260 9.4E-42 T 28-03-2018 IPR012654 Conserved hypothetical protein CHP02391 DDI_RS09305 dbf1dd0c7bca0c1cbe10ca8899179772 416 Pfam PF07690 Major Facilitator Superfamily 39 255 3.2E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS09305 dbf1dd0c7bca0c1cbe10ca8899179772 416 Gene3D G3DSA:1.20.1250.20 21 223 5.8E-34 T 28-03-2018 DDI_RS09305 dbf1dd0c7bca0c1cbe10ca8899179772 416 Gene3D G3DSA:1.20.1250.20 224 415 2.6E-12 T 28-03-2018 DDI_RS09305 dbf1dd0c7bca0c1cbe10ca8899179772 416 SUPERFAMILY SSF103473 25 410 1.06E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS14085 8b0db1ee6e6d192e9165defc3b9a1494 127 SUPERFAMILY SSF82649 1 125 9.16E-48 T 28-03-2018 DDI_RS14085 8b0db1ee6e6d192e9165defc3b9a1494 127 Pfam PF01592 NifU-like N terminal domain 2 125 1.2E-56 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DDI_RS14085 8b0db1ee6e6d192e9165defc3b9a1494 127 Gene3D G3DSA:3.90.1010.10 1 127 7.8E-52 T 28-03-2018 DDI_RS14085 8b0db1ee6e6d192e9165defc3b9a1494 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.2E-69 T 28-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DDI_RS08990 f223ce4edd6746b99b6aaabfe601fad1 338 Hamap MF_00958 Regulator of RpoS [rssB]. 1 338 53.569 T 28-03-2018 IPR028616 Regulator of RpoS DDI_RS08990 f223ce4edd6746b99b6aaabfe601fad1 338 SUPERFAMILY SSF52172 6 169 2.7E-34 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS08990 f223ce4edd6746b99b6aaabfe601fad1 338 Pfam PF00072 Response regulator receiver domain 10 118 1.2E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS08990 f223ce4edd6746b99b6aaabfe601fad1 338 SMART SM00448 8 120 2.9E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS08990 f223ce4edd6746b99b6aaabfe601fad1 338 Gene3D G3DSA:3.40.50.2300 2 241 6.7E-35 T 28-03-2018 DDI_RS13360 34ff3678aa3e42cd995111dd31da4cd3 285 Gene3D G3DSA:3.40.190.10 28 178 4.1E-31 T 28-03-2018 DDI_RS13360 34ff3678aa3e42cd995111dd31da4cd3 285 SUPERFAMILY SSF53850 1 282 6.23E-56 T 28-03-2018 DDI_RS13360 34ff3678aa3e42cd995111dd31da4cd3 285 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 280 3.4E-55 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS13360 34ff3678aa3e42cd995111dd31da4cd3 285 Gene3D G3DSA:3.40.190.10 179 285 3.9E-15 T 28-03-2018 DDI_RS13360 34ff3678aa3e42cd995111dd31da4cd3 285 SMART SM00062 33 282 7.3E-50 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 Gene3D G3DSA:3.90.1150.10 1 159 1.5E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 Gene3D G3DSA:3.90.1150.10 242 397 1.0E-48 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 SUPERFAMILY SSF53383 1 390 1.01E-118 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.4E-35 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.4E-35 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.4E-35 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.4E-35 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDI_RS16285 1417f532efa50bced2bda8d1fe752a7c 397 Pfam PF00155 Aminotransferase class I and II 26 392 4.0E-81 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS15280 4b29e869b955fd64a31003a347cea5d8 510 SUPERFAMILY SSF103473 250 422 1.07E-75 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS15280 4b29e869b955fd64a31003a347cea5d8 510 SUPERFAMILY SSF103473 10 195 1.07E-75 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS15280 4b29e869b955fd64a31003a347cea5d8 510 SUPERFAMILY SSF103473 474 500 1.07E-75 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS15280 4b29e869b955fd64a31003a347cea5d8 510 Gene3D G3DSA:1.20.1250.20 254 506 1.4E-31 T 28-03-2018 DDI_RS15280 4b29e869b955fd64a31003a347cea5d8 510 Gene3D G3DSA:1.20.1250.20 12 199 1.9E-36 T 28-03-2018 DDI_RS15280 4b29e869b955fd64a31003a347cea5d8 510 Pfam PF07690 Major Facilitator Superfamily 18 412 3.8E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS15280 4b29e869b955fd64a31003a347cea5d8 510 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 497 1.1E-206 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 SUPERFAMILY SSF51735 3 251 4.86E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 9.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 9.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 249 2.0E-53 T 28-03-2018 DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 7.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 7.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 Gene3D G3DSA:3.40.50.720 1 40 1.3E-8 T 28-03-2018 DDI_RS05640 ac8aa902f7789d81777c471798ea0a14 252 Gene3D G3DSA:3.40.50.720 41 252 5.3E-55 T 28-03-2018 DDI_RS13125 0b1a8d9d9024e3badb823ef0376aec61 400 Pfam PF12693 GspL periplasmic domain 246 399 7.6E-54 T 28-03-2018 IPR025691 GspL periplasmic domain DDI_RS13125 0b1a8d9d9024e3badb823ef0376aec61 400 SUPERFAMILY SSF53067 12 150 4.66E-33 T 28-03-2018 DDI_RS13125 0b1a8d9d9024e3badb823ef0376aec61 400 Pfam PF05134 Type II secretion system (T2SS), protein L 13 238 9.6E-81 T 28-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain DDI_RS13125 0b1a8d9d9024e3badb823ef0376aec61 400 PIRSF PIRSF015761 10 399 2.5E-41 T 28-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 DDI_RS13125 0b1a8d9d9024e3badb823ef0376aec61 400 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 13 398 1.4E-120 T 28-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 DDI_RS13125 0b1a8d9d9024e3badb823ef0376aec61 400 SUPERFAMILY SSF53067 153 236 1.23E-19 T 28-03-2018 DDI_RS16385 35e95820e7a680b506f689813c72adab 154 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 13 152 2.8E-28 T 28-03-2018 IPR011747 Conserved hypothetical protein CHP02241 DDI_RS16385 35e95820e7a680b506f689813c72adab 154 Pfam PF06841 T4-like virus tail tube protein gp19 16 149 1.0E-34 T 28-03-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.9E-86 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.9E-86 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.9E-86 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.9E-86 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.9E-86 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.9E-86 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.9E-86 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.9E-38 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 SUPERFAMILY SSF53223 1 122 3.93E-39 T 28-03-2018 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 Gene3D G3DSA:3.40.50.720 141 264 1.1E-39 T 28-03-2018 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 4.2E-69 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 Gene3D G3DSA:3.40.50.10860 11 140 1.1E-47 T 28-03-2018 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.963 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 SUPERFAMILY SSF51735 123 285 8.62E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS13445 2c64b5013e8bff0a76d74e6dffe5f2fc 289 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 Gene3D G3DSA:1.10.10.10 2 84 5.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 Gene3D G3DSA:3.40.190.10 175 265 2.5E-19 T 28-03-2018 DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 Pfam PF03466 LysR substrate binding domain 88 295 3.6E-38 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.7E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 Gene3D G3DSA:3.40.190.10 88 174 2.9E-14 T 28-03-2018 DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 SUPERFAMILY SSF53850 89 297 5.58E-39 T 28-03-2018 DDI_RS13840 61985cf462397a41d4de8836d91275a6 307 SUPERFAMILY SSF46785 4 82 1.96E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08295 157df30a0ba03f6fe3cbcfbf7065e4e5 509 Gene3D G3DSA:3.40.1080.10 237 480 4.4E-37 T 28-03-2018 DDI_RS08295 157df30a0ba03f6fe3cbcfbf7065e4e5 509 SUPERFAMILY SSF100950 6 234 3.42E-77 T 28-03-2018 DDI_RS08295 157df30a0ba03f6fe3cbcfbf7065e4e5 509 Gene3D G3DSA:3.40.1080.10 1 235 1.8E-52 T 28-03-2018 DDI_RS08295 157df30a0ba03f6fe3cbcfbf7065e4e5 509 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 504 2.7E-239 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 DDI_RS08295 157df30a0ba03f6fe3cbcfbf7065e4e5 509 SUPERFAMILY SSF100950 239 504 6.91E-60 T 28-03-2018 DDI_RS08295 157df30a0ba03f6fe3cbcfbf7065e4e5 509 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 35 506 1.4E-230 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 DDI_RS08295 157df30a0ba03f6fe3cbcfbf7065e4e5 509 PIRSF PIRSF009451 2 506 3.1E-248 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 DDI_RS15190 696870336e4b89add550ffe737d1fe26 263 SUPERFAMILY SSF53850 8 255 1.38E-53 T 28-03-2018 DDI_RS15190 696870336e4b89add550ffe737d1fe26 263 Gene3D G3DSA:3.40.190.10 3 147 4.2E-30 T 28-03-2018 DDI_RS15190 696870336e4b89add550ffe737d1fe26 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 1.0E-46 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS15190 696870336e4b89add550ffe737d1fe26 263 SMART SM00062 36 256 8.2E-40 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS15190 696870336e4b89add550ffe737d1fe26 263 Gene3D G3DSA:3.40.190.10 148 255 1.2E-8 T 28-03-2018 DDI_RS15190 696870336e4b89add550ffe737d1fe26 263 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS19175 e2ce003ba6623a88e358b4a13dcbdd4d 300 Pfam PF01545 Cation efflux family 14 206 6.0E-42 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DDI_RS19175 e2ce003ba6623a88e358b4a13dcbdd4d 300 Gene3D G3DSA:3.30.70.1350 207 290 6.4E-23 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain DDI_RS19175 e2ce003ba6623a88e358b4a13dcbdd4d 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 4.6E-25 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain DDI_RS19175 e2ce003ba6623a88e358b4a13dcbdd4d 300 SUPERFAMILY SSF160240 209 288 4.19E-24 T 28-03-2018 DDI_RS19175 e2ce003ba6623a88e358b4a13dcbdd4d 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 1.2E-70 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DDI_RS19175 e2ce003ba6623a88e358b4a13dcbdd4d 300 SUPERFAMILY SSF161111 8 207 5.36E-51 T 28-03-2018 DDI_RS19175 e2ce003ba6623a88e358b4a13dcbdd4d 300 Gene3D G3DSA:1.20.1510.10 8 206 1.1E-41 T 28-03-2018 DDI_RS10010 60b2ee8cd08954937b9adf0e8467857d 65 SUPERFAMILY SSF143034 2 64 2.09E-22 T 28-03-2018 DDI_RS10010 60b2ee8cd08954937b9adf0e8467857d 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.3E-26 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDI_RS10010 60b2ee8cd08954937b9adf0e8467857d 65 Pfam PF01632 Ribosomal protein L35 2 60 1.5E-22 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10010 60b2ee8cd08954937b9adf0e8467857d 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS10010 60b2ee8cd08954937b9adf0e8467857d 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.885 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDI_RS10010 60b2ee8cd08954937b9adf0e8467857d 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDI_RS10010 60b2ee8cd08954937b9adf0e8467857d 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDI_RS10010 60b2ee8cd08954937b9adf0e8467857d 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 185 200 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 185 205 1.2E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 206 227 1.2E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 77 97 1.2E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 97 116 1.2E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 58 77 1.2E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 230 255 1.2E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 56 65 1.8E-31 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 156 168 1.8E-31 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 178 190 1.8E-31 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 128 142 1.8E-31 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 116 128 1.8E-31 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 246 256 1.8E-31 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 Pfam PF00813 FliP family 61 252 4.2E-79 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 233 245 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS12040 b1dee554ec9a9e2a81c1f6c829ff879f 258 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 60 256 8.1E-94 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DDI_RS11805 d41f91060614503e90a6dc44b6b50069 347 SUPERFAMILY SSF51556 8 346 8.51E-149 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS11805 d41f91060614503e90a6dc44b6b50069 347 Gene3D G3DSA:3.20.20.140 14 347 1.4E-55 T 28-03-2018 DDI_RS11805 d41f91060614503e90a6dc44b6b50069 347 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 346 2.7E-150 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS11805 d41f91060614503e90a6dc44b6b50069 347 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 52.353 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS11805 d41f91060614503e90a6dc44b6b50069 347 Pfam PF01979 Amidohydrolase family 15 314 5.4E-21 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 DDI_RS11805 d41f91060614503e90a6dc44b6b50069 347 PIRSF PIRSF001237 4 347 7.4E-144 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS11805 d41f91060614503e90a6dc44b6b50069 347 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 8.1E-6 T 28-03-2018 IPR000014 PAS domain DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 Gene3D G3DSA:3.30.450.20 97 208 2.3E-13 T 28-03-2018 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 SMART SM00387 313 425 9.2E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.7E-27 T 28-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 Gene3D G3DSA:1.10.287.130 209 256 2.0E-18 T 28-03-2018 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 SUPERFAMILY SSF55874 259 422 1.2E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 2.9E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 SUPERFAMILY SSF55785 87 195 1.92E-10 T 28-03-2018 IPR000014 PAS domain DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 3.5E-135 T 28-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 Pfam PF00989 PAS fold 99 194 7.3E-9 T 28-03-2018 IPR013767 PAS fold GO:0006355 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 SUPERFAMILY SSF47384 190 268 4.51E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 2.0E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 Gene3D G3DSA:3.30.565.10 257 427 7.0E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 2.5E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.5E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 2.5E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.5E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 SMART SM00091 98 165 1.2E-5 T 28-03-2018 IPR000014 PAS domain DDI_RS04085 d5de05f26f7656b69fc47742c1b67b59 440 SMART SM00388 203 269 4.4E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS00150 7bf5a0292788c1c8d6a74b9bfc266876 489 Pfam PF00575 S1 RNA binding domain 38 109 4.5E-7 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS00150 7bf5a0292788c1c8d6a74b9bfc266876 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.3E-176 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DDI_RS00150 7bf5a0292788c1c8d6a74b9bfc266876 489 Gene3D G3DSA:2.40.50.140 32 127 1.6E-30 T 28-03-2018 DDI_RS00150 7bf5a0292788c1c8d6a74b9bfc266876 489 SUPERFAMILY SSF50249 39 128 3.97E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS00150 7bf5a0292788c1c8d6a74b9bfc266876 489 Pfam PF10150 Ribonuclease E/G family 124 393 7.2E-103 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DDI_RS00150 7bf5a0292788c1c8d6a74b9bfc266876 489 SMART SM00316 37 122 2.4E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS08105 0c755c285818695e88d63c4c87cec3c4 1176 Gene3D G3DSA:1.10.10.10 1111 1165 1.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08105 0c755c285818695e88d63c4c87cec3c4 1176 Pfam PF09397 Ftsk gamma domain 1111 1171 4.1E-27 T 28-03-2018 IPR018541 FtsK gamma domain DDI_RS08105 0c755c285818695e88d63c4c87cec3c4 1176 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 4.8E-43 T 28-03-2018 IPR025199 DNA translocase FtsK, 4TM region DDI_RS08105 0c755c285818695e88d63c4c87cec3c4 1176 SUPERFAMILY SSF52540 767 1080 6.51E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08105 0c755c285818695e88d63c4c87cec3c4 1176 SUPERFAMILY SSF46785 1109 1173 1.03E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08105 0c755c285818695e88d63c4c87cec3c4 1176 Gene3D G3DSA:3.40.50.300 496 1046 7.7E-55 T 28-03-2018 DDI_RS08105 0c755c285818695e88d63c4c87cec3c4 1176 Pfam PF01580 FtsK/SpoIIIE family 794 1007 7.0E-73 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DDI_RS08105 0c755c285818695e88d63c4c87cec3c4 1176 SMART SM00843 1109 1174 1.1E-41 T 28-03-2018 IPR018541 FtsK gamma domain DDI_RS04515 ce0fa02fe3d25a28c1cdb619659bb827 86 SUPERFAMILY SSF54292 3 85 4.59E-20 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS04515 ce0fa02fe3d25a28c1cdb619659bb827 86 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DDI_RS04515 ce0fa02fe3d25a28c1cdb619659bb827 86 Gene3D G3DSA:3.10.20.30 1 86 1.1E-15 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS04515 ce0fa02fe3d25a28c1cdb619659bb827 86 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 78 8.3E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 Gene3D G3DSA:3.40.50.300 245 371 5.9E-13 T 28-03-2018 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 SUPERFAMILY SSF54980 366 421 7.19E-13 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.0E-153 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.8E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 6.8E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 6.8E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 Gene3D G3DSA:3.40.50.300 11 244 2.2E-14 T 28-03-2018 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.907 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 5.0E-29 T 28-03-2018 IPR032305 GTP-binding protein, middle domain DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 2.6E-29 T 28-03-2018 IPR025121 GTPase HflX, N-terminal DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 SUPERFAMILY SSF52540 198 374 8.64E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.3E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS17270 e689252ecd2cadc3035312c25f0617d0 426 PIRSF PIRSF006809 3 422 1.1E-148 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 DDI_RS08715 992f320b41c9676528231a1dbdfe76ac 470 Gene3D G3DSA:2.70.70.10 311 463 4.0E-44 T 28-03-2018 DDI_RS08715 992f320b41c9676528231a1dbdfe76ac 470 SMART SM00257 128 173 9.9E-7 T 28-03-2018 IPR018392 LysM domain DDI_RS08715 992f320b41c9676528231a1dbdfe76ac 470 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 38 4.6E-8 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal DDI_RS08715 992f320b41c9676528231a1dbdfe76ac 470 Gene3D G3DSA:3.10.350.10 122 188 1.2E-7 T 28-03-2018 DDI_RS08715 992f320b41c9676528231a1dbdfe76ac 470 SUPERFAMILY SSF54106 127 171 2.49E-5 T 28-03-2018 IPR018392 LysM domain DDI_RS08715 992f320b41c9676528231a1dbdfe76ac 470 Pfam PF01476 LysM domain 129 172 1.9E-8 T 28-03-2018 IPR018392 LysM domain DDI_RS08715 992f320b41c9676528231a1dbdfe76ac 470 SUPERFAMILY SSF51261 194 438 4.24E-67 T 28-03-2018 IPR011055 Duplicated hybrid motif DDI_RS08715 992f320b41c9676528231a1dbdfe76ac 470 Pfam PF01551 Peptidase family M23 343 437 2.2E-33 T 28-03-2018 IPR016047 Peptidase M23 DDI_RS15985 adbf931644547f1a5869b4c91df036d0 344 Gene3D G3DSA:3.20.20.70 24 265 5.5E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS15985 adbf931644547f1a5869b4c91df036d0 344 PIRSF PIRSF006621 19 341 4.1E-73 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS15985 adbf931644547f1a5869b4c91df036d0 344 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 108 126 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS15985 adbf931644547f1a5869b4c91df036d0 344 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 27 341 3.1E-161 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DDI_RS15985 adbf931644547f1a5869b4c91df036d0 344 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 22 343 52.575 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DDI_RS15985 adbf931644547f1a5869b4c91df036d0 344 Pfam PF01207 Dihydrouridine synthase (Dus) 30 338 5.5E-95 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS15985 adbf931644547f1a5869b4c91df036d0 344 SUPERFAMILY SSF51395 28 326 1.59E-73 T 28-03-2018 DDI_RS10350 06613270b39f649aa584237a6532a75a 459 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 365 374 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS10350 06613270b39f649aa584237a6532a75a 459 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 38 99 5.4E-4 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS10350 06613270b39f649aa584237a6532a75a 459 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 17 453 1.2E-150 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS10350 06613270b39f649aa584237a6532a75a 459 SUPERFAMILY SSF52540 106 380 8.24E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10350 06613270b39f649aa584237a6532a75a 459 SMART SM00382 177 358 2.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS10350 06613270b39f649aa584237a6532a75a 459 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 165 374 3.0E-70 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS10350 06613270b39f649aa584237a6532a75a 459 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 30 454 2.7E-186 T 28-03-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS10350 06613270b39f649aa584237a6532a75a 459 Gene3D G3DSA:3.40.50.300 104 381 1.5E-78 T 28-03-2018 DDI_RS04485 1ce04a952edd94d1a3e71bd1d08dafd5 159 Gene3D G3DSA:3.90.960.10 1 159 3.8E-42 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DDI_RS04485 1ce04a952edd94d1a3e71bd1d08dafd5 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.4E-55 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DDI_RS04485 1ce04a952edd94d1a3e71bd1d08dafd5 159 PIRSF PIRSF006181 1 159 7.1E-56 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DDI_RS04485 1ce04a952edd94d1a3e71bd1d08dafd5 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 147 1.9E-23 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DDI_RS04485 1ce04a952edd94d1a3e71bd1d08dafd5 159 SUPERFAMILY SSF55826 2 155 1.06E-43 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DDI_RS13100 41ee5c98ae05b5e0308d308f55b205de 352 SUPERFAMILY SSF51395 1 350 8.55E-114 T 28-03-2018 DDI_RS13100 41ee5c98ae05b5e0308d308f55b205de 352 Gene3D G3DSA:3.20.20.70 1 352 7.6E-117 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS13100 41ee5c98ae05b5e0308d308f55b205de 352 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 329 3.9E-81 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDI_RS18660 e2916be034973e615915b7911817b54f 306 Pfam PF00892 EamA-like transporter family 9 142 2.8E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS18660 e2916be034973e615915b7911817b54f 306 SUPERFAMILY SSF103481 42 145 1.31E-14 T 28-03-2018 DDI_RS18660 e2916be034973e615915b7911817b54f 306 TIGRFAM TIGR00688 rarD: protein RarD 8 261 2.5E-91 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 DDI_RS18660 e2916be034973e615915b7911817b54f 306 SUPERFAMILY SSF103481 186 285 4.97E-8 T 28-03-2018 DDI_RS04165 9cc880062e661061258150a372283765 157 Gene3D G3DSA:3.40.50.960 1 155 3.2E-63 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS04165 9cc880062e661061258150a372283765 157 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 5.2E-58 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS04165 9cc880062e661061258150a372283765 157 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.625 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS04165 9cc880062e661061258150a372283765 157 SUPERFAMILY SSF52121 3 154 2.09E-59 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS04165 9cc880062e661061258150a372283765 157 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.3E-55 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS15450 bdf143fc59f0cc45af21728eabb2bf30 244 PIRSF PIRSF000857 3 244 3.1E-54 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DDI_RS15450 bdf143fc59f0cc45af21728eabb2bf30 244 Gene3D G3DSA:3.40.50.620 2 216 1.3E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS15450 bdf143fc59f0cc45af21728eabb2bf30 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 2.5E-48 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 DDI_RS15450 bdf143fc59f0cc45af21728eabb2bf30 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 3.5E-87 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DDI_RS15450 bdf143fc59f0cc45af21728eabb2bf30 244 SUPERFAMILY SSF52402 22 208 9.63E-50 T 28-03-2018 DDI_RS15450 bdf143fc59f0cc45af21728eabb2bf30 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 6.5E-94 T 28-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 DDI_RS15450 bdf143fc59f0cc45af21728eabb2bf30 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 38.979 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DDI_RS16700 9b7bad047fa3a202619b8a407ebc7c1a 310 Gene3D G3DSA:3.30.1700.10 134 304 2.5E-70 T 28-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS16700 9b7bad047fa3a202619b8a407ebc7c1a 310 SUPERFAMILY SSF54211 139 283 9.1E-54 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS16700 9b7bad047fa3a202619b8a407ebc7c1a 310 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 9 281 4.6E-108 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS16700 9b7bad047fa3a202619b8a407ebc7c1a 310 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 7 285 46.197 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS16700 9b7bad047fa3a202619b8a407ebc7c1a 310 SUPERFAMILY SSF54211 8 129 4.78E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS16700 9b7bad047fa3a202619b8a407ebc7c1a 310 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 7 306 8.5E-159 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS16700 9b7bad047fa3a202619b8a407ebc7c1a 310 Gene3D G3DSA:3.30.230.20 6 133 7.4E-48 T 28-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 91 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 Gene3D G3DSA:3.40.140.10 1 127 6.0E-35 T 28-03-2018 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 Gene3D G3DSA:3.40.430.10 128 370 6.0E-63 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 PIRSF PIRSF006769 1 370 1.4E-129 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 365 5.8E-147 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 SUPERFAMILY SSF53597 147 366 5.24E-56 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 102 5.6E-22 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 Pfam PF01872 RibD C-terminal domain 150 363 3.3E-53 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 SUPERFAMILY SSF53927 6 148 8.32E-50 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDI_RS04160 53ee7a99963c03b1f12294da78a23fd0 370 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 149 368 3.7E-69 T 28-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 DDI_RS13195 ba412871f47402b0d9b518cce61f6faf 286 Gene3D G3DSA:3.20.10.10 136 285 1.4E-43 T 28-03-2018 DDI_RS13195 ba412871f47402b0d9b518cce61f6faf 286 Gene3D G3DSA:3.30.470.10 1 135 3.9E-29 T 28-03-2018 DDI_RS13195 ba412871f47402b0d9b518cce61f6faf 286 SUPERFAMILY SSF56752 5 280 7.59E-80 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS13195 ba412871f47402b0d9b518cce61f6faf 286 ProSitePatterns PS00770 Aminotransferases class-IV signature. 181 211 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS13195 ba412871f47402b0d9b518cce61f6faf 286 Pfam PF01063 Amino-transferase class IV 32 256 5.8E-48 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 SMART SM00490 262 343 1.1E-29 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 Gene3D G3DSA:3.40.50.300 1 225 3.3E-56 T 28-03-2018 DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 429 49.657 T 28-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 SUPERFAMILY SSF52540 76 361 1.85E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 Pfam PF00271 Helicase conserved C-terminal domain 237 343 2.8E-28 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 Pfam PF00270 DEAD/DEAH box helicase 28 197 8.8E-45 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 Gene3D G3DSA:3.40.50.300 226 449 3.4E-43 T 28-03-2018 DDI_RS14315 45360e28a0b454622dee9ec0d6fa26e6 450 SMART SM00487 23 223 2.9E-56 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS05940 9988e0dbba998a87ab30018709da047a 287 Pfam PF00043 Glutathione S-transferase, C-terminal domain 179 247 1.5E-12 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal DDI_RS05940 9988e0dbba998a87ab30018709da047a 287 Gene3D G3DSA:3.40.30.10 42 142 2.6E-26 T 28-03-2018 DDI_RS05940 9988e0dbba998a87ab30018709da047a 287 SUPERFAMILY SSF47616 178 256 7.38E-37 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS05940 9988e0dbba998a87ab30018709da047a 287 SUPERFAMILY SSF47616 114 149 7.38E-37 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS05940 9988e0dbba998a87ab30018709da047a 287 Gene3D G3DSA:1.20.1050.10 143 285 1.1E-32 T 28-03-2018 DDI_RS05940 9988e0dbba998a87ab30018709da047a 287 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 124 8.1E-8 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS05940 9988e0dbba998a87ab30018709da047a 287 SUPERFAMILY SSF52833 35 128 5.73E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 Hamap MF_00580 10 kDa chaperonin [groS]. 11 105 23.497 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 SUPERFAMILY SSF50129 10 105 1.77E-30 T 28-03-2018 IPR011032 GroES-like DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 Gene3D G3DSA:2.30.33.40 10 105 2.8E-31 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 SMART SM00883 11 104 2.8E-47 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 Pfam PF00166 Chaperonin 10 Kd subunit 11 104 8.5E-29 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 ProSitePatterns PS00681 Chaperonins cpn10 signature. 12 36 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 PRINTS PR00297 10kDa chaperonin signature 34 55 1.5E-26 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 PRINTS PR00297 10kDa chaperonin signature 12 27 1.5E-26 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 PRINTS PR00297 10kDa chaperonin signature 91 104 1.5E-26 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDI_RS01555 f5abfaabc110045d702ea6fdef375cec 106 PRINTS PR00297 10kDa chaperonin signature 69 81 1.5E-26 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDI_RS07195 b007bacad19634d01787a58689b10dc4 338 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 DDI_RS07195 b007bacad19634d01787a58689b10dc4 338 PIRSF PIRSF002825 5 338 1.4E-80 T 28-03-2018 IPR026045 Ferric binding protein DDI_RS07195 b007bacad19634d01787a58689b10dc4 338 Gene3D G3DSA:3.40.190.10 141 286 2.8E-31 T 28-03-2018 DDI_RS07195 b007bacad19634d01787a58689b10dc4 338 Gene3D G3DSA:3.40.190.10 25 140 3.4E-8 T 28-03-2018 DDI_RS07195 b007bacad19634d01787a58689b10dc4 338 SUPERFAMILY SSF53850 33 327 2.1E-74 T 28-03-2018 DDI_RS07195 b007bacad19634d01787a58689b10dc4 338 Pfam PF13343 Bacterial extracellular solute-binding protein 81 321 5.4E-27 T 28-03-2018 DDI_RS15970 36f063385563e6a729c997e871c9fd25 335 Gene3D G3DSA:1.10.10.10 4 87 3.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15970 36f063385563e6a729c997e871c9fd25 335 Gene3D G3DSA:3.40.190.10 92 177 1.3E-13 T 28-03-2018 DDI_RS15970 36f063385563e6a729c997e871c9fd25 335 SUPERFAMILY SSF53850 93 301 7.06E-39 T 28-03-2018 DDI_RS15970 36f063385563e6a729c997e871c9fd25 335 SUPERFAMILY SSF46785 7 115 2.02E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15970 36f063385563e6a729c997e871c9fd25 335 Gene3D G3DSA:3.40.190.10 178 267 6.5E-18 T 28-03-2018 DDI_RS15970 36f063385563e6a729c997e871c9fd25 335 Pfam PF03466 LysR substrate binding domain 92 299 2.8E-38 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS15970 36f063385563e6a729c997e871c9fd25 335 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.5E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS08555 7b0320e77c922b9504d1a6abc22b1352 157 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 6 145 2.3E-30 T 28-03-2018 IPR011747 Conserved hypothetical protein CHP02241 DDI_RS08555 7b0320e77c922b9504d1a6abc22b1352 157 Pfam PF06841 T4-like virus tail tube protein gp19 8 145 2.1E-37 T 28-03-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 SUPERFAMILY SSF52151 4 119 1.44E-60 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 SUPERFAMILY SSF52151 182 288 1.44E-60 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 279 7.6E-30 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 6 282 3.3E-101 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 Pfam PF00698 Acyl transferase domain 5 280 5.3E-36 T 28-03-2018 IPR014043 Acyl transferase DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 Gene3D G3DSA:3.40.366.10 179 300 3.3E-20 T 28-03-2018 DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 SUPERFAMILY SSF55048 123 189 2.49E-13 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 Gene3D G3DSA:3.30.70.250 134 178 4.7E-18 T 28-03-2018 DDI_RS12270 dde43f1bdf0decc52585181c0dce40da 377 Gene3D G3DSA:3.40.366.10 3 133 1.6E-32 T 28-03-2018 DDI_RS14975 d4e3fa3a26124f67fe5cf90de88044b4 73 SUPERFAMILY SSF47336 2 72 8.77E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS14975 d4e3fa3a26124f67fe5cf90de88044b4 73 Pfam PF00550 Phosphopantetheine attachment site 3 68 5.4E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS14975 d4e3fa3a26124f67fe5cf90de88044b4 73 Gene3D G3DSA:1.10.1200.10 1 73 7.2E-11 T 28-03-2018 DDI_RS02805 413bad9465095958c8602b20f563a534 275 Gene3D G3DSA:2.60.120.10 17 122 9.2E-31 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS02805 413bad9465095958c8602b20f563a534 275 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 9.6E-93 T 28-03-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DDI_RS02805 413bad9465095958c8602b20f563a534 275 PIRSF PIRSF036628 1 270 1.4E-104 T 28-03-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DDI_RS02805 413bad9465095958c8602b20f563a534 275 SUPERFAMILY SSF51182 5 253 4.05E-64 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS02805 413bad9465095958c8602b20f563a534 275 Gene3D G3DSA:2.60.120.10 123 269 1.9E-54 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS02805 413bad9465095958c8602b20f563a534 275 Pfam PF04962 KduI/IolB family 7 264 4.8E-104 T 28-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DDI_RS08340 efaa2aeccab18ef88cdaa981d599f85a 766 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 237 420 3.5E-38 T 28-03-2018 IPR004477 ComEC/Rec2-related protein DDI_RS08340 efaa2aeccab18ef88cdaa981d599f85a 766 Pfam PF00753 Metallo-beta-lactamase superfamily 518 690 7.9E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS08340 efaa2aeccab18ef88cdaa981d599f85a 766 Pfam PF03772 Competence protein 216 484 4.9E-54 T 28-03-2018 IPR004477 ComEC/Rec2-related protein DDI_RS08340 efaa2aeccab18ef88cdaa981d599f85a 766 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 140 730 3.1E-184 T 28-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 DDI_RS08340 efaa2aeccab18ef88cdaa981d599f85a 766 SUPERFAMILY SSF56281 509 752 9.17E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS08340 efaa2aeccab18ef88cdaa981d599f85a 766 Gene3D G3DSA:3.60.15.10 506 724 8.5E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS08340 efaa2aeccab18ef88cdaa981d599f85a 766 SMART SM00849 520 676 1.3E-12 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 Gene3D G3DSA:3.40.50.10810 143 368 5.2E-25 T 28-03-2018 DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 Pfam PF12137 RNA polymerase recycling family C-terminal 618 977 1.2E-155 T 28-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 Pfam PF00271 Helicase conserved C-terminal domain 505 614 8.2E-16 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 SUPERFAMILY SSF52540 493 657 1.87E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 SUPERFAMILY SSF52540 286 350 1.87E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 Gene3D G3DSA:3.40.50.300 493 967 3.1E-23 T 28-03-2018 DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 SMART SM00490 530 614 2.4E-16 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 SMART SM00487 163 355 8.4E-23 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 Pfam PF00176 SNF2 family N-terminal domain 187 453 4.5E-17 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 979 29.049 T 28-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 DDI_RS16910 af56b2516e266e3cb4a4cd34bba1b7ec 981 SUPERFAMILY SSF52540 140 366 4.7E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 5.8E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 5.8E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 5.8E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 5.8E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 Gene3D G3DSA:3.30.930.10 128 462 2.0E-94 T 28-03-2018 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.314 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 9.4E-13 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 9.4E-83 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 SUPERFAMILY SSF55681 97 464 5.55E-97 T 28-03-2018 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 Gene3D G3DSA:2.40.50.140 8 106 1.5E-18 T 28-03-2018 DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 SUPERFAMILY SSF50249 16 101 6.86E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS11530 bb24f284a5d9af8cd7138698fe23396e 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 2.3E-210 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DDI_RS12145 ccf9fc226600a8d15d268d15b0869294 129 Gene3D G3DSA:3.40.50.2300 1 129 2.4E-38 T 28-03-2018 DDI_RS12145 ccf9fc226600a8d15d268d15b0869294 129 Pfam PF00072 Response regulator receiver domain 9 120 1.9E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS12145 ccf9fc226600a8d15d268d15b0869294 129 SUPERFAMILY SSF52172 5 125 1.99E-37 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS12145 ccf9fc226600a8d15d268d15b0869294 129 SMART SM00448 6 120 9.0E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 Pfam PF06586 TraK protein 575 672 8.8E-9 T 28-03-2018 IPR010563 Pilus assembly TraK DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 Pfam PF00263 Bacterial type II and III secretion system protein 380 537 1.6E-35 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 393 412 1.7E-29 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 195 212 1.7E-29 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 427 442 1.7E-29 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 326 346 1.7E-29 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 516 535 1.7E-29 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 Pfam PF03958 Bacterial type II/III secretion system short domain 183 323 4.6E-21 T 28-03-2018 IPR005644 NolW-like DDI_RS10255 9cd2a56d6b342f0e3583572ed75d75fc 691 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 264 538 1.8E-93 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DDI_RS03505 4357fe3b6f0dbd4fa6661d213af940d8 360 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DDI_RS03505 4357fe3b6f0dbd4fa6661d213af940d8 360 Gene3D G3DSA:1.10.530.10 180 358 1.4E-34 T 28-03-2018 DDI_RS03505 4357fe3b6f0dbd4fa6661d213af940d8 360 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 59.671 T 28-03-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 DDI_RS03505 4357fe3b6f0dbd4fa6661d213af940d8 360 Pfam PF11873 Domain of unknown function (DUF3393) 5 190 9.0E-72 T 28-03-2018 IPR024570 Murein transglycosylase-C, N-terminal DDI_RS03505 4357fe3b6f0dbd4fa6661d213af940d8 360 Pfam PF01464 Transglycosylase SLT domain 194 315 2.7E-31 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 DDI_RS03505 4357fe3b6f0dbd4fa6661d213af940d8 360 SUPERFAMILY SSF53955 162 356 9.57E-37 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS17920 d0538ed5ff44ba6b094e7fa512dfc43c 157 Pfam PF04361 Protein of unknown function (DUF494) 1 156 1.8E-60 T 28-03-2018 IPR007456 Smg DDI_RS17920 d0538ed5ff44ba6b094e7fa512dfc43c 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.561 T 28-03-2018 IPR007456 Smg DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Gene3D G3DSA:4.10.860.10 182 241 8.1E-14 T 28-03-2018 IPR001943 UVR domain GO:0005515 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 SMART SM00465 17 98 2.8E-24 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 SMART SM00278 588 607 37.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 SMART SM00278 556 575 0.76 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 1.6E-44 T 28-03-2018 IPR001162 UvrC family homology region DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 SUPERFAMILY SSF82771 17 100 1.96E-24 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 2.2E-7 T 28-03-2018 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.484 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 SUPERFAMILY SSF46600 190 243 4.32E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 SUPERFAMILY SSF47781 517 609 1.49E-17 T 28-03-2018 IPR010994 RuvA domain 2-like DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Gene3D G3DSA:1.10.150.20 568 610 2.5E-11 T 28-03-2018 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Gene3D G3DSA:1.10.150.20 526 567 0.37 T 28-03-2018 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Pfam PF02151 UvrB/uvrC motif 206 237 2.0E-6 T 28-03-2018 IPR001943 UVR domain GO:0005515 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 2.5E-12 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 588 1.7E-227 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 DDI_RS12380 1bd0887e79b1cb88dce0d7c4cd297a18 610 Gene3D G3DSA:3.40.1440.10 4 101 1.1E-24 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00826 4398 4569 3.6E-13 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00826 2553 2728 2.5E-8 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 6109 6179 3.93E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 3594 3671 1.96E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 3744 3773 1.96E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 5184 5257 9.29E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF51735 1524 1762 2.03E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 4176 4195 1.2E-87 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 3757 4137 1.2E-87 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF51735 3320 3555 7.46E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 5438 5468 1.05E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 5330 5405 1.05E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 5615 5631 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4880 5066 1.1E-59 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1525 1719 1.8E-28 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3322 3507 4.2E-51 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00825 Beta-ketoacyl synthase 1948 2367 1.4E-147 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00825 Beta-ketoacyl synthase 6228 6668 2.5E-55 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00825 Beta-ketoacyl synthase 3762 4200 2.9E-190 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00825 Beta-ketoacyl synthase 40 467 7.0E-83 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00825 Beta-ketoacyl synthase 629 1037 9.7E-148 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00825 Beta-ketoacyl synthase 5456 5893 1.7E-189 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 626 871 2.9E-68 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 3752 4020 1.3E-75 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 1930 1961 1.44E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 1817 1889 1.44E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF51735 4875 5122 1.12E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:1.10.1200.10 1791 1890 2.0E-10 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 1943 2310 2.81E-84 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.50.720 4873 5138 1.9E-47 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.50.720 3317 3580 4.9E-44 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.50.720 1519 1790 2.1E-35 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 6225 6340 3.12E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 6367 6607 3.12E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF14765 Polyketide synthase dehydratase 2553 2844 1.2E-53 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF14765 Polyketide synthase dehydratase 2883 3127 5.5E-25 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF14765 Polyketide synthase dehydratase 4398 4685 6.5E-51 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 35 407 2.07E-58 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 442 463 2.07E-58 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 6223 6483 1.4E-50 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 5446 5714 1.2E-77 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 30 294 1.3E-57 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 1939 2200 2.8E-68 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM01294 5334 5400 8.5E-6 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM01294 5188 5254 1.2E-6 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 2203 2365 5.2E-50 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 6486 6666 4.5E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 875 1035 7.6E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 298 465 4.5E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 4025 4198 7.0E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.40.47.10 5718 5891 2.3E-56 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00550 Phosphopantetheine attachment site 528 594 4.6E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00550 Phosphopantetheine attachment site 1819 1884 1.6E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00550 Phosphopantetheine attachment site 6110 6174 2.0E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00550 Phosphopantetheine attachment site 5336 5400 5.9E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00550 Phosphopantetheine attachment site 5190 5254 3.2E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00550 Phosphopantetheine attachment site 3602 3666 9.5E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF47336 529 607 9.42E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 624 986 2.66E-82 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 290 414 1.7E-21 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4018 4141 8.0E-37 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2197 2313 3.4E-36 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 868 986 7.9E-38 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 5710 5834 3.3E-41 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 6479 6611 2.0E-19 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3922 3938 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 771 787 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3760 4009 6.8E-83 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6226 6471 1.6E-49 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 38 282 2.1E-55 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1946 2188 3.0E-70 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 627 860 1.8E-67 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5454 5702 4.1E-84 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00823 Phosphopantetheine attachment site 1816 1888 0.0015 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00823 Phosphopantetheine attachment site 6108 6178 0.0011 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00823 Phosphopantetheine attachment site 526 598 7.5E-9 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00823 Phosphopantetheine attachment site 5333 5404 2.5E-13 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00823 Phosphopantetheine attachment site 5187 5258 1.8E-16 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SMART SM00823 Phosphopantetheine attachment site 3599 3670 3.6E-8 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 ProSitePatterns PS00012 Phosphopantetheine attachment site. 6134 6149 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.10.129.10 4400 4531 1.7E-17 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.10.129.10 2557 2679 6.6E-15 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:3.10.129.10 2865 2971 1.0E-9 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF08659 KR domain 4880 5065 2.2E-57 T 28-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF08659 KR domain 3323 3506 2.3E-53 T 28-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF08659 KR domain 1525 1718 3.6E-46 T 28-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 5451 5827 1.2E-88 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 SUPERFAMILY SSF53901 5869 5889 1.2E-88 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 5838 5954 2.1E-12 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 989 1097 1.6E-13 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 4145 4243 8.9E-10 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2317 2429 1.9E-11 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:1.10.1200.10 6102 6222 7.1E-10 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:1.10.1200.10 526 625 7.8E-13 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:1.10.1200.10 3593 3704 5.9E-14 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:1.10.1200.10 5182 5319 7.6E-15 T 28-03-2018 DDI_RS12315 d832cfa92f16b077776faa2c66e8b109 6882 Gene3D G3DSA:1.10.1200.10 5320 5410 1.2E-14 T 28-03-2018 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 Pfam PF02911 Formyl transferase, C-terminal domain 202 295 1.9E-17 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 Gene3D G3DSA:3.10.25.10 203 305 7.6E-22 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 SUPERFAMILY SSF50486 204 304 9.42E-25 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.229 T 28-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 SUPERFAMILY SSF53328 1 202 9.94E-58 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 Gene3D G3DSA:3.40.50.170 1 202 9.6E-53 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 Pfam PF00551 Formyl transferase 53 173 5.7E-26 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 PIRSF PIRSF036506 1 660 0.0 T 28-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 1.1E-43 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 SUPERFAMILY SSF51735 317 651 2.08E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS20230 fb5aa640aa4d85c4dd2b1bb6e2fd0de3 663 Gene3D G3DSA:3.40.50.720 314 657 3.4E-47 T 28-03-2018 DDI_RS07205 82571d61d82a9969ea62078662169243 352 SUPERFAMILY SSF52540 4 239 5.82E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07205 82571d61d82a9969ea62078662169243 352 Pfam PF00005 ABC transporter 19 163 1.0E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07205 82571d61d82a9969ea62078662169243 352 Gene3D G3DSA:3.40.50.300 1 284 1.4E-66 T 28-03-2018 DDI_RS07205 82571d61d82a9969ea62078662169243 352 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07205 82571d61d82a9969ea62078662169243 352 SUPERFAMILY SSF50331 242 336 4.99E-6 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS07205 82571d61d82a9969ea62078662169243 352 SMART SM00382 28 213 5.3E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 Gene3D G3DSA:3.20.20.80 1 465 8.5E-147 T 28-03-2018 DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 381 392 3.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 3.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 402 419 3.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 427 439 3.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 296 310 3.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 SUPERFAMILY SSF51445 2 463 4.53E-154 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DDI_RS15845 544f6a436df0127645df563b3c6ae036 465 Pfam PF00232 Glycosyl hydrolase family 1 3 462 1.1E-133 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 Gene3D G3DSA:3.40.50.1000 1 24 0.1 T 28-03-2018 IPR023214 HAD-like domain DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 Gene3D G3DSA:1.10.150.240 25 76 5.0E-15 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 60 183 1.6E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 4.3E-24 T 28-03-2018 IPR023214 HAD-like domain DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 SUPERFAMILY SSF56784 3 212 2.03E-47 T 28-03-2018 IPR023214 HAD-like domain DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 7.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 7.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS20195 2700cc6c8af2011534918b11cc7e1683 221 Gene3D G3DSA:3.40.50.1000 77 216 5.3E-21 T 28-03-2018 IPR023214 HAD-like domain DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 SUPERFAMILY SSF46934 3 56 5.1E-19 T 28-03-2018 IPR009060 UBA-like GO:0005515 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 SUPERFAMILY SSF54713 56 139 2.62E-21 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 Gene3D G3DSA:1.10.8.10 1 56 3.3E-25 T 28-03-2018 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 Pfam PF00889 Elongation factor TS 73 265 7.9E-65 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 78.968 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 Gene3D G3DSA:3.30.479.20 147 281 1.4E-47 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 Gene3D G3DSA:3.30.479.20 57 144 2.3E-15 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 SUPERFAMILY SSF54713 144 283 9.29E-52 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS03730 3ea109b7aa44e25ab900fdbf70611ae7 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 2.4E-114 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 SUPERFAMILY SSF55190 2 97 1.19E-20 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 SMART SM00836 460 576 2.6E-37 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 SMART SM01016 1 87 1.0E-26 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 SUPERFAMILY SSF52374 111 454 8.8E-90 T 28-03-2018 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 Gene3D G3DSA:3.40.50.620 107 440 5.4E-56 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 Gene3D G3DSA:1.10.730.10 441 576 1.0E-42 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 6.6E-196 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 Pfam PF05746 DALR anticodon binding domain 460 576 5.7E-34 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 SUPERFAMILY SSF47323 454 576 2.62E-35 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.2E-24 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.2E-24 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.2E-24 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.2E-24 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 Gene3D G3DSA:3.30.1360.70 1 106 2.0E-27 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 6.2E-20 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 Pfam PF00750 tRNA synthetases class I (R) 98 446 2.0E-161 T 28-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DDI_RS08620 851fe69236302fabb7aec59de778a6db 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 27.937 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDI_RS14340 1787ea26df005bd78c0e4428f7a813b4 422 Gene3D G3DSA:3.40.640.10 1 287 4.0E-61 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS14340 1787ea26df005bd78c0e4428f7a813b4 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS14340 1787ea26df005bd78c0e4428f7a813b4 422 SUPERFAMILY SSF53383 1 421 1.22E-125 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS14340 1787ea26df005bd78c0e4428f7a813b4 422 Gene3D G3DSA:3.90.1150.10 289 422 7.9E-53 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS14340 1787ea26df005bd78c0e4428f7a813b4 422 PIRSF PIRSF001434 1 422 6.9E-134 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS14340 1787ea26df005bd78c0e4428f7a813b4 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 4 420 4.4E-194 T 28-03-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 DDI_RS14340 1787ea26df005bd78c0e4428f7a813b4 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 1.7E-140 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS19725 f8afacfe1956545bc897b841e2f7cb97 214 Gene3D G3DSA:1.25.40.10 153 213 4.5E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19725 f8afacfe1956545bc897b841e2f7cb97 214 Gene3D G3DSA:1.25.40.10 45 152 3.5E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19725 f8afacfe1956545bc897b841e2f7cb97 214 SUPERFAMILY SSF48452 62 182 2.66E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19725 f8afacfe1956545bc897b841e2f7cb97 214 Pfam PF14559 Tetratricopeptide repeat 139 191 6.2E-7 T 28-03-2018 DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 63 161 2.1E-19 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Pfam PF04829 Pre-toxin domain with VENN motif 3530 3580 4.9E-18 T 28-03-2018 IPR006914 VENN motif-containing domain DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 2101 2523 1.2E-7 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 941 1041 6.3E-6 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 1042 1168 3.2E-8 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 734 836 1.8E-10 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 1169 1316 3.4E-8 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 677 733 1.7E-4 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 1317 1434 7.6E-9 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 555 676 1.9E-7 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 1711 1857 1.3E-9 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 31 321 8.4E-60 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 322 484 1.4E-4 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 1435 1597 1.0E-8 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 485 554 9.7E-6 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 1598 1710 2.8E-7 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Pfam PF05860 haemagglutination activity domain 38 165 2.9E-32 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 SUPERFAMILY SSF51126 323 348 2.45E-61 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 SUPERFAMILY SSF51126 42 290 2.45E-61 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 2619 2750 0.0053 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Gene3D G3DSA:2.160.20.10 2751 2969 2.0E-4 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 SMART SM00912 45 166 1.2E-46 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Pfam PF13332 Haemagluttinin repeat 2574 2624 0.0016 T 28-03-2018 IPR025157 Hemagglutinin repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Pfam PF13332 Haemagluttinin repeat 2775 2876 8.6E-6 T 28-03-2018 IPR025157 Hemagglutinin repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Pfam PF13332 Haemagluttinin repeat 3005 3173 6.1E-44 T 28-03-2018 IPR025157 Hemagglutinin repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Pfam PF13332 Haemagluttinin repeat 2632 2693 5.0E-5 T 28-03-2018 IPR025157 Hemagglutinin repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 Pfam PF13332 Haemagluttinin repeat 2703 2754 5.0E-6 T 28-03-2018 IPR025157 Hemagglutinin repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1801 1840 0.013 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 457 494 3.9E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1880 1907 2.5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 512 551 1.4E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1628 1661 1.7E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1508 1543 0.41 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1095 1133 0.017 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1447 1484 0.0096 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 671 704 0.037 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1543 1583 0.082 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1703 1732 0.44 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1016 1053 0.017 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 935 976 0.22 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 803 840 3.1E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 744 781 0.85 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 859 897 3.0E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1234 1269 0.033 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 552 581 0.66 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 705 742 0.058 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 960 994 0.66 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1393 1425 0.89 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1583 1624 0.57 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1196 1221 2.2 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1314 1340 0.16 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 781 822 6.0E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 476 512 0.0013 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 628 666 0.5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1291 1328 0.078 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 897 935 2.0 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS10225 c30e350e8d79e1ce1c391b5dc649f026 3839 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 922 955 1.4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 SUPERFAMILY SSF52540 3 190 1.39E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 Gene3D G3DSA:3.40.50.300 1 50 0.0011 T 28-03-2018 DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.774 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 SMART SM00072 3 187 3.2E-82 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 Gene3D G3DSA:3.40.50.300 84 187 6.7E-35 T 28-03-2018 DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 3.0E-76 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 Gene3D G3DSA:3.30.63.10 51 83 2.2E-27 T 28-03-2018 DDI_RS19745 549c40ed6025e2b73623f80c7b4a908b 207 Pfam PF00625 Guanylate kinase 5 186 1.3E-66 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DDI_RS09035 6d4b02168ae48d3ae6696a868baafd49 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 73 1.4E-14 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS09035 6d4b02168ae48d3ae6696a868baafd49 302 SUPERFAMILY SSF161098 100 283 6.15E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09035 6d4b02168ae48d3ae6696a868baafd49 302 Gene3D G3DSA:1.10.3720.10 28 291 2.9E-38 T 28-03-2018 DDI_RS09035 6d4b02168ae48d3ae6696a868baafd49 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 300 3.1E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Pfam PF13484 4Fe-4S double cluster binding domain 690 755 1.4E-8 T 28-03-2018 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1168 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 SUPERFAMILY SSF54862 666 829 4.19E-17 T 28-03-2018 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 SUPERFAMILY SSF52518 785 1168 1.18E-127 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 247 2.4E-82 T 28-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Gene3D G3DSA:3.30.70.20 670 783 7.2E-23 T 28-03-2018 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 955 1066 2.9E-10 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 SMART SM00890 621 680 1.9E-30 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 373 1.3E-14 T 28-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 609 2.1E-31 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Pfam PF10371 Domain of unknown function 627 679 3.9E-24 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 SUPERFAMILY SSF53323 417 669 7.32E-87 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Gene3D G3DSA:3.40.920.10 416 626 2.3E-61 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Gene3D G3DSA:3.40.50.920 259 414 1.5E-39 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 SUPERFAMILY SSF52518 3 258 1.49E-77 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 PIRSF PIRSF000159 1 1169 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Gene3D G3DSA:3.40.50.970 2 258 3.2E-55 T 28-03-2018 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Gene3D G3DSA:3.40.50.970 784 1169 1.6E-116 T 28-03-2018 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 Gene3D G3DSA:4.10.780.10 633 669 3.0E-18 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 SUPERFAMILY SSF52922 259 405 3.71E-42 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS17630 2f86801e4c17149637c66c814f8c338a 1169 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 744 755 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 25.674 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 1.4E-29 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 SUPERFAMILY SSF51735 4 161 4.32E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 SUPERFAMILY SSF48179 163 271 1.34E-29 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 PIRSF PIRSF000193 3 271 4.4E-74 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 2.2E-19 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 Gene3D G3DSA:3.40.50.720 1 165 3.7E-29 T 28-03-2018 DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 Gene3D G3DSA:1.10.3730.10 166 273 5.4E-32 T 28-03-2018 DDI_RS15800 1a8aa197867bcc99468991615d8c847d 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 6.5E-73 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 DDI_RS14930 01f8ad7d2ea1a0861ebd7f4f95fd1c0d 426 SUPERFAMILY SSF55031 203 312 2.54E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS14930 01f8ad7d2ea1a0861ebd7f4f95fd1c0d 426 SUPERFAMILY SSF53187 332 417 2.69E-44 T 28-03-2018 DDI_RS14930 01f8ad7d2ea1a0861ebd7f4f95fd1c0d 426 SUPERFAMILY SSF53187 7 202 2.69E-44 T 28-03-2018 DDI_RS14930 01f8ad7d2ea1a0861ebd7f4f95fd1c0d 426 Pfam PF01546 Peptidase family M20/M25/M40 97 416 2.8E-22 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS14930 01f8ad7d2ea1a0861ebd7f4f95fd1c0d 426 Pfam PF07687 Peptidase dimerisation domain 202 311 1.2E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS14930 01f8ad7d2ea1a0861ebd7f4f95fd1c0d 426 Gene3D G3DSA:3.40.630.10 3 315 1.1E-43 T 28-03-2018 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Gene3D G3DSA:3.40.47.10 36 293 2.3E-50 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Gene3D G3DSA:3.40.47.10 1187 1451 1.4E-80 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Gene3D G3DSA:3.10.129.10 668 791 7.8E-17 T 28-03-2018 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Pfam PF14765 Polyketide synthase dehydratase 665 962 1.3E-55 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SUPERFAMILY SSF53901 38 404 2.16E-59 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SUPERFAMILY SSF53901 1609 1629 3.19E-90 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SUPERFAMILY SSF53901 1188 1567 3.19E-90 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SUPERFAMILY SSF47336 1024 1095 1.01E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SUPERFAMILY SSF47336 1175 1206 1.01E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1352 1368 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Pfam PF00550 Phosphopantetheine attachment site 1031 1090 1.8E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 43 281 1.1E-45 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1191 1438 4.4E-86 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SMART SM00826 665 839 1.8E-22 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Gene3D G3DSA:3.40.47.10 1455 1631 1.5E-56 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SUPERFAMILY SSF51735 2104 2290 6.52E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SMART SM01294 1024 1090 1.1E-6 T 28-03-2018 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 289 406 2.4E-25 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1447 1574 2.3E-38 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Pfam PF08659 KR domain 2106 2288 2.2E-32 T 28-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Gene3D G3DSA:1.10.1200.10 1014 1186 1.8E-14 T 28-03-2018 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SMART SM00823 Phosphopantetheine attachment site 1022 1094 5.9E-14 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Gene3D G3DSA:3.40.50.720 2097 2323 1.8E-32 T 28-03-2018 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Gene3D G3DSA:3.40.47.10 294 468 1.5E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1578 1694 2.2E-13 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2106 2290 2.4E-20 T 28-03-2018 DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SMART SM00825 Beta-ketoacyl synthase 1193 1633 6.1E-192 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12295 f087f4491d4311ad221f70990cb952e2 2397 SMART SM00825 Beta-ketoacyl synthase 45 470 1.2E-83 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 382 404 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 Gene3D G3DSA:1.20.1480.30 50 144 0.12 T 28-03-2018 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 Gene3D G3DSA:1.10.287.950 408 608 1.7E-49 T 28-03-2018 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 416 570 1.2E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 SUPERFAMILY SSF58104 324 608 9.55E-74 T 28-03-2018 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 532 561 7.9E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 407 7.9E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 455 482 7.9E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 484 513 7.9E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 SMART SM00304 304 356 5.1E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 SMART SM00283 357 604 1.9E-91 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 Gene3D G3DSA:1.10.287.950 314 407 1.7E-10 T 28-03-2018 DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 SMART SM01358 36 282 1.2E-32 T 28-03-2018 IPR032255 Helical bimodular sensor domain DDI_RS09540 96a055206addf187445cbb0e2a56ae9e 673 Gene3D G3DSA:1.20.5.50 174 292 0.15 T 28-03-2018 DDI_RS07180 c40f1f9b2c73a118c7818f5f97f10365 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.3E-72 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 DDI_RS07180 c40f1f9b2c73a118c7818f5f97f10365 160 SUPERFAMILY SSF55040 11 155 3.01E-61 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 DDI_RS07180 c40f1f9b2c73a118c7818f5f97f10365 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.585 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 DDI_RS07180 c40f1f9b2c73a118c7818f5f97f10365 160 Gene3D G3DSA:3.30.70.640 2 158 2.1E-68 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 DDI_RS07180 c40f1f9b2c73a118c7818f5f97f10365 160 Pfam PF01967 MoaC family 15 150 4.0E-55 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 DDI_RS13045 e5bc579915615e1c2275db83d1cf2843 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS13045 e5bc579915615e1c2275db83d1cf2843 265 SMART SM00382 29 218 1.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS13045 e5bc579915615e1c2275db83d1cf2843 265 Pfam PF00005 ABC transporter 21 168 7.0E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS13045 e5bc579915615e1c2275db83d1cf2843 265 Gene3D G3DSA:3.40.50.300 1 240 3.0E-59 T 28-03-2018 DDI_RS13045 e5bc579915615e1c2275db83d1cf2843 265 SUPERFAMILY SSF52540 4 230 1.3E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05700 1178147eb8e651f8fe57bd470b69efb9 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 120 2.3E-48 T 28-03-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 DDI_RS13475 b9fc18d9efb4ffd87742477ae942f2f3 169 PIRSF PIRSF001338 5 168 1.5E-65 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 DDI_RS13475 b9fc18d9efb4ffd87742477ae942f2f3 169 SUPERFAMILY SSF52255 7 167 4.84E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DDI_RS13475 b9fc18d9efb4ffd87742477ae942f2f3 169 Pfam PF00731 AIR carboxylase 9 157 3.6E-63 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DDI_RS13475 b9fc18d9efb4ffd87742477ae942f2f3 169 Gene3D G3DSA:3.40.50.7700 1 167 7.5E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DDI_RS13475 b9fc18d9efb4ffd87742477ae942f2f3 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 2.3E-64 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DDI_RS13475 b9fc18d9efb4ffd87742477ae942f2f3 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 31.819 T 28-03-2018 IPR033747 Class I PurE DDI_RS13475 b9fc18d9efb4ffd87742477ae942f2f3 169 SMART SM01001 8 159 3.1E-100 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DDI_RS07630 c0835a363f6028d8fa9504c52cce0b97 590 Pfam PF11893 Domain of unknown function (DUF3413) 7 251 1.6E-101 T 28-03-2018 IPR024588 Inner membrane protein YejM, N-terminal DDI_RS07630 c0835a363f6028d8fa9504c52cce0b97 590 Pfam PF00884 Sulfatase 260 504 5.8E-22 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 DDI_RS07630 c0835a363f6028d8fa9504c52cce0b97 590 Gene3D G3DSA:3.40.720.10 257 535 3.2E-27 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 DDI_RS07630 c0835a363f6028d8fa9504c52cce0b97 590 PIRSF PIRSF004950 6 590 1.9E-193 T 28-03-2018 IPR012159 Inner membrane protein YejM DDI_RS07630 c0835a363f6028d8fa9504c52cce0b97 590 SUPERFAMILY SSF53649 256 565 1.18E-38 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS16185 4046ba356096be779229908d5815c332 242 SUPERFAMILY SSF53955 73 236 5.53E-32 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS16185 4046ba356096be779229908d5815c332 242 Pfam PF01464 Transglycosylase SLT domain 93 188 2.7E-16 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 DDI_RS16185 4046ba356096be779229908d5815c332 242 Gene3D G3DSA:1.10.530.10 52 227 1.2E-26 T 28-03-2018 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 Gene3D G3DSA:1.10.287.130 221 289 2.0E-12 T 28-03-2018 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 SMART SM00387 332 440 2.1E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 SMART SM00388 233 293 6.8E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 SUPERFAMILY SSF55874 292 440 2.75E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 2.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 SMART SM00304 180 232 8.3E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 Pfam PF00672 HAMP domain 183 225 3.5E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 1.3E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 Gene3D G3DSA:3.30.565.10 294 449 7.8E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18450 ccaa05b0ffa01d891af172ee2459a8f1 470 SUPERFAMILY SSF47384 232 289 2.16E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS09830 4a8fb06d4bd6a2f3c75ede1a49490207 63 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.034 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 DDI_RS09830 4a8fb06d4bd6a2f3c75ede1a49490207 63 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 47 6.0E-9 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 DDI_RS09830 4a8fb06d4bd6a2f3c75ede1a49490207 63 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 8.8E-27 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 SMART SM00363 360 422 6.4E-5 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 Gene3D G3DSA:3.40.50.620 4 230 5.3E-69 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 7 426 45.922 T 28-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 4.0E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 224 236 4.0E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 4.0E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 191 213 4.0E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 427 3.9E-142 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 SUPERFAMILY SSF55174 330 426 1.11E-20 T 28-03-2018 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 Gene3D G3DSA:1.10.240.10 231 333 1.6E-32 T 28-03-2018 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 Gene3D G3DSA:3.10.290.10 334 428 9.8E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 SUPERFAMILY SSF52374 8 331 2.36E-105 T 28-03-2018 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 Pfam PF00579 tRNA synthetases class I (W and Y) 34 331 4.7E-90 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS11180 c6ecf6f0f4789649ca2977eb6a7a43b8 428 Pfam PF01479 S4 domain 362 405 1.2E-5 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS04905 77fbb2bc7c237eb3a1a13dc85e5d837d 350 SUPERFAMILY SSF52540 117 319 3.62E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04905 77fbb2bc7c237eb3a1a13dc85e5d837d 350 Pfam PF02562 PhoH-like protein 118 321 5.7E-96 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 DDI_RS04905 77fbb2bc7c237eb3a1a13dc85e5d837d 350 Gene3D G3DSA:3.40.50.300 114 321 4.7E-29 T 28-03-2018 DDI_RS10305 1997d05baa236dee5fb71d082728ab2b 127 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 35 127 3.0E-27 T 28-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 DDI_RS18130 4812830107938ea7b326326c877059a8 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.5E-70 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18130 4812830107938ea7b326326c877059a8 124 SUPERFAMILY SSF50249 3 123 3.51E-52 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS18130 4812830107938ea7b326326c877059a8 124 PIRSF PIRSF002133 1 124 3.6E-54 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18130 4812830107938ea7b326326c877059a8 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18130 4812830107938ea7b326326c877059a8 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.1E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18130 4812830107938ea7b326326c877059a8 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.1E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18130 4812830107938ea7b326326c877059a8 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.1E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18130 4812830107938ea7b326326c877059a8 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.1E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18130 4812830107938ea7b326326c877059a8 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.1E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18130 4812830107938ea7b326326c877059a8 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.1E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18130 4812830107938ea7b326326c877059a8 124 Gene3D G3DSA:2.40.50.140 1 124 7.8E-64 T 28-03-2018 DDI_RS18130 4812830107938ea7b326326c877059a8 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.394 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18130 4812830107938ea7b326326c877059a8 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 7.9E-43 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 ProSitePatterns PS00123 Alkaline phosphatase active site. 134 142 - T 28-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 SUPERFAMILY SSF53649 53 483 3.63E-132 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 SMART SM00098 78 484 4.2E-192 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 Gene3D G3DSA:3.40.720.10 36 484 3.9E-124 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 PRINTS PR00113 Alkaline phosphatase signature 234 244 6.4E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 PRINTS PR00113 Alkaline phosphatase signature 134 149 6.4E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 PRINTS PR00113 Alkaline phosphatase signature 333 362 6.4E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 PRINTS PR00113 Alkaline phosphatase signature 77 97 6.4E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 PRINTS PR00113 Alkaline phosphatase signature 171 191 6.4E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DDI_RS19155 2251c107792c13a13db4e95f22ce5c63 484 Pfam PF00245 Alkaline phosphatase 77 443 4.5E-119 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DDI_RS19235 378ccf84ba54e8ab31c537c5964ed3e6 154 PIRSF PIRSF029256 1 154 5.8E-63 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 DDI_RS19235 378ccf84ba54e8ab31c537c5964ed3e6 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.495 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 DDI_RS19235 378ccf84ba54e8ab31c537c5964ed3e6 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 6.6E-32 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDI_RS19235 378ccf84ba54e8ab31c537c5964ed3e6 154 Gene3D G3DSA:3.40.1280.10 1 154 6.0E-38 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS19235 378ccf84ba54e8ab31c537c5964ed3e6 154 SUPERFAMILY SSF75217 1 152 5.17E-45 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 Gene3D G3DSA:1.10.8.60 181 238 5.3E-19 T 28-03-2018 DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 Gene3D G3DSA:1.10.10.60 239 328 7.5E-9 T 28-03-2018 DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 Gene3D G3DSA:3.40.50.300 1 179 4.9E-27 T 28-03-2018 DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 325 1.1E-161 T 28-03-2018 IPR014317 Transcription activator PspF DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 Pfam PF02954 Bacterial regulatory protein, Fis family 289 320 5.7E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 SUPERFAMILY SSF46689 222 327 3.99E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 SMART SM00382 28 179 4.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 Pfam PF00158 Sigma-54 interaction domain 9 170 2.3E-60 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 SUPERFAMILY SSF52540 10 244 2.1E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 308 328 1.7E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS11055 8cd9af51b73ce63d09c51d63f5578603 343 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 308 1.7E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS17210 8356057d5839bbdf27b4d45b219154bc 170 SMART SM00731 16 165 3.1E-54 T 28-03-2018 IPR006640 SprT-like DDI_RS17210 8356057d5839bbdf27b4d45b219154bc 170 Pfam PF17283 SprT-like zinc ribbon domain 125 163 1.4E-7 T 28-03-2018 IPR035240 SprT-like, zinc ribbon domain DDI_RS17210 8356057d5839bbdf27b4d45b219154bc 170 Gene3D G3DSA:2.20.28.30 121 165 9.9E-5 T 28-03-2018 DDI_RS17210 8356057d5839bbdf27b4d45b219154bc 170 Pfam PF10263 SprT-like family 21 117 1.7E-15 T 28-03-2018 IPR006640 SprT-like DDI_RS17210 8356057d5839bbdf27b4d45b219154bc 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 39.129 T 28-03-2018 IPR023483 Uncharacterised protein family SprT DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 PIRSF PIRSF000423 1 441 1.4E-206 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 234.56 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 Gene3D G3DSA:3.40.630.30 296 440 7.2E-22 T 28-03-2018 DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 4.9E-196 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 Pfam PF00696 Amino acid kinase family 25 267 4.1E-30 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 Pfam PF00583 Acetyltransferase (GNAT) family 336 412 5.8E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 Gene3D G3DSA:3.40.1160.10 6 293 1.0E-51 T 28-03-2018 DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 SUPERFAMILY SSF53633 4 290 9.49E-66 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS03610 8406b1b9046ed4a17bf9baf9df122947 441 SUPERFAMILY SSF55729 237 416 1.7E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS01570 3ce3004abee9b21b936daaa955a3e0f9 287 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 286 9.6E-107 T 28-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 DDI_RS01570 3ce3004abee9b21b936daaa955a3e0f9 287 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 287 28.528 T 28-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 DDI_RS01570 3ce3004abee9b21b936daaa955a3e0f9 287 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site DDI_RS01570 3ce3004abee9b21b936daaa955a3e0f9 287 Pfam PF01040 UbiA prenyltransferase family 28 269 8.0E-68 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 Gene3D G3DSA:3.40.190.10 93 206 1.6E-13 T 28-03-2018 DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 Pfam PF03466 LysR substrate binding domain 99 295 7.0E-17 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 Gene3D G3DSA:1.10.10.10 4 91 8.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 SUPERFAMILY SSF46785 6 89 1.43E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 SUPERFAMILY SSF53850 98 296 7.78E-29 T 28-03-2018 DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS08450 ebbb8e365313dcf3d4ea7fed2cecfaf9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS04375 ea359f3a077e3594115acbea99d790b5 47 SUPERFAMILY SSF57840 8 41 7.32E-13 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS04375 ea359f3a077e3594115acbea99d790b5 47 Pfam PF00444 Ribosomal protein L36 1 41 3.0E-15 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS04375 ea359f3a077e3594115acbea99d790b5 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 38 1.0E-7 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS04375 ea359f3a077e3594115acbea99d790b5 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS04375 ea359f3a077e3594115acbea99d790b5 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.995 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17275 a00e6bddb680a612f689b574fcf5313d 99 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DDI_RS17275 a00e6bddb680a612f689b574fcf5313d 99 Gene3D G3DSA:2.30.30.100 4 73 1.0E-33 T 28-03-2018 DDI_RS17275 a00e6bddb680a612f689b574fcf5313d 99 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 1.8E-29 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DDI_RS17275 a00e6bddb680a612f689b574fcf5313d 99 SUPERFAMILY SSF50182 7 69 3.66E-24 T 28-03-2018 IPR010920 LSM domain DDI_RS17275 a00e6bddb680a612f689b574fcf5313d 99 Pfam PF17209 Hfq protein 7 69 4.5E-31 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DDI_RS13380 49ecb9ffe389bb92ea1baacb6ce44a16 249 SMART SM00859 2 106 0.0096 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDI_RS13380 49ecb9ffe389bb92ea1baacb6ce44a16 249 Gene3D G3DSA:3.40.50.720 1 180 3.1E-27 T 28-03-2018 DDI_RS13380 49ecb9ffe389bb92ea1baacb6ce44a16 249 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 91 5.4E-21 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DDI_RS13380 49ecb9ffe389bb92ea1baacb6ce44a16 249 SUPERFAMILY SSF51735 1 202 1.43E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 SMART SM01130 5 296 2.7E-74 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 Pfam PF00701 Dihydrodipicolinate synthetase family 7 290 7.2E-50 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 4.6E-9 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 4.6E-9 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 4.6E-9 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 4.6E-9 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 PIRSF PIRSF001365 1 302 7.9E-61 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 SUPERFAMILY SSF51569 3 297 3.56E-74 T 28-03-2018 DDI_RS10400 175ab242d32f192da68256b5cfffb0fa 304 Gene3D G3DSA:3.20.20.70 1 302 6.1E-75 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS08495 50a5626194ad8f9505789affc73f9ce4 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 9.0E-44 T 28-03-2018 IPR007494 Glutaredoxin 2, C-terminal DDI_RS08495 50a5626194ad8f9505789affc73f9ce4 215 SUPERFAMILY SSF47616 77 214 1.56E-38 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS08495 50a5626194ad8f9505789affc73f9ce4 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DDI_RS08495 50a5626194ad8f9505789affc73f9ce4 215 Gene3D G3DSA:1.20.1050.10 97 215 2.9E-25 T 28-03-2018 DDI_RS08495 50a5626194ad8f9505789affc73f9ce4 215 SUPERFAMILY SSF52833 1 99 9.89E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS08495 50a5626194ad8f9505789affc73f9ce4 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 2.2E-83 T 28-03-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 DDI_RS08495 50a5626194ad8f9505789affc73f9ce4 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 4.5E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS08495 50a5626194ad8f9505789affc73f9ce4 215 Gene3D G3DSA:3.40.30.10 1 96 3.3E-13 T 28-03-2018 DDI_RS15125 ac741edc8432a36124d7ca0743666519 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 8.2E-15 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DDI_RS15125 ac741edc8432a36124d7ca0743666519 814 SUPERFAMILY SSF47203 360 507 1.29E-24 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DDI_RS15125 ac741edc8432a36124d7ca0743666519 814 SUPERFAMILY SSF56645 120 355 2.36E-44 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 DDI_RS15125 ac741edc8432a36124d7ca0743666519 814 Gene3D G3DSA:1.20.140.10 350 509 7.5E-22 T 28-03-2018 DDI_RS15125 ac741edc8432a36124d7ca0743666519 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 144 233 6.8E-16 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DDI_RS15125 ac741edc8432a36124d7ca0743666519 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 4.2E-112 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 DDI_RS15125 ac741edc8432a36124d7ca0743666519 814 Gene3D G3DSA:2.40.110.10 236 349 8.0E-16 T 28-03-2018 DDI_RS15125 ac741edc8432a36124d7ca0743666519 814 Gene3D G3DSA:1.10.540.10 76 235 3.1E-30 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DDI_RS09845 e2acf81ccc2c338bb00ca3cc1ea1d046 453 Gene3D G3DSA:3.30.1330.90 10 157 1.5E-54 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 DDI_RS09845 e2acf81ccc2c338bb00ca3cc1ea1d046 453 Pfam PF03315 Serine dehydratase beta chain 3 154 6.6E-58 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DDI_RS09845 e2acf81ccc2c338bb00ca3cc1ea1d046 453 Pfam PF03313 Serine dehydratase alpha chain 183 447 4.5E-93 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit DDI_RS09845 e2acf81ccc2c338bb00ca3cc1ea1d046 453 Gene3D G3DSA:1.10.4100.10 259 443 2.5E-31 T 28-03-2018 DDI_RS09845 e2acf81ccc2c338bb00ca3cc1ea1d046 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 450 3.4E-223 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DDI_RS09845 e2acf81ccc2c338bb00ca3cc1ea1d046 453 SUPERFAMILY SSF143548 16 157 8.63E-47 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 DDI_RS19870 541e8630d6fa7a4bad943e32a8f197c0 175 Gene3D G3DSA:3.40.50.300 1 171 2.0E-28 T 28-03-2018 DDI_RS19870 541e8630d6fa7a4bad943e32a8f197c0 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 140 3.3E-47 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DDI_RS19870 541e8630d6fa7a4bad943e32a8f197c0 175 SUPERFAMILY SSF52540 5 167 2.16E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19870 541e8630d6fa7a4bad943e32a8f197c0 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 165 1.4E-46 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DDI_RS14745 a8030738e28d6381a31f8375a15b4b73 251 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 251 120.263 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDI_RS14745 a8030738e28d6381a31f8375a15b4b73 251 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 8.7E-111 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDI_RS14745 a8030738e28d6381a31f8375a15b4b73 251 SUPERFAMILY SSF75217 1 248 1.9E-103 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS14745 a8030738e28d6381a31f8375a15b4b73 251 PIRSF PIRSF000386 1 251 3.9E-103 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDI_RS14745 a8030738e28d6381a31f8375a15b4b73 251 Gene3D G3DSA:1.10.1270.20 170 251 2.5E-35 T 28-03-2018 DDI_RS14745 a8030738e28d6381a31f8375a15b4b73 251 Gene3D G3DSA:3.40.1280.10 1 169 3.0E-73 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS14745 a8030738e28d6381a31f8375a15b4b73 251 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 3.0E-70 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDI_RS14985 b15c4dd32c6b248867e2e99795875907 372 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 115 337 1.5E-10 T 28-03-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT DDI_RS14985 b15c4dd32c6b248867e2e99795875907 372 PIRSF PIRSF016636 1 370 1.5E-72 T 28-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 Gene3D G3DSA:3.40.140.10 36 172 6.5E-24 T 28-03-2018 DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 PIRSF PIRSF006334 14 291 1.3E-104 T 28-03-2018 DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 140 3.8E-10 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 Gene3D G3DSA:3.40.140.10 182 291 4.2E-14 T 28-03-2018 DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 47.878 T 28-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 SUPERFAMILY SSF53927 154 289 2.37E-37 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 SUPERFAMILY SSF53927 1 147 5.23E-37 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 5.2E-45 T 28-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DDI_RS07115 cec1d61e801af44d3ed1ca5c759ccd21 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 283 3.7E-85 T 28-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Gene3D G3DSA:3.30.565.10 351 514 6.7E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 PIRSF PIRSF003182 1 779 0.0 T 28-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 2.5E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Pfam PF00989 PAS fold 157 266 1.7E-17 T 28-03-2018 IPR013767 PAS fold GO:0006355 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 8.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 8.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 8.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 8.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SUPERFAMILY SSF47384 269 347 6.87E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Gene3D G3DSA:3.40.50.2300 515 645 3.2E-32 T 28-03-2018 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Gene3D G3DSA:1.10.287.970 3 88 4.8E-37 T 28-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Gene3D G3DSA:3.30.450.20 106 279 4.0E-27 T 28-03-2018 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SMART SM00387 394 507 1.2E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 503 6.1E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SUPERFAMILY SSF55874 336 503 2.36E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 5.2E-16 T 28-03-2018 IPR000014 PAS domain DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Gene3D G3DSA:1.10.287.130 280 343 1.5E-17 T 28-03-2018 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Pfam PF00072 Response regulator receiver domain 528 639 7.0E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SUPERFAMILY SSF47226 663 775 2.49E-30 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SMART SM00073 676 773 2.1E-14 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SUPERFAMILY SSF52172 526 656 6.12E-30 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Gene3D G3DSA:1.20.120.160 646 765 1.1E-19 T 28-03-2018 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 Pfam PF01627 Hpt domain 687 771 7.9E-13 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SMART SM00388 282 347 6.1E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SMART SM00448 526 639 2.5E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SMART SM00091 155 221 6.8E-9 T 28-03-2018 IPR000014 PAS domain DDI_RS00365 900a7ae4567bb51d1e723e1bece7406e 779 SUPERFAMILY SSF55785 142 267 2.97E-22 T 28-03-2018 IPR000014 PAS domain DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.4E-93 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.5E-41 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.489 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 SUPERFAMILY SSF55831 1 264 4.32E-130 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 Pfam PF00303 Thymidylate synthase 2 264 8.9E-126 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 Gene3D G3DSA:3.30.572.10 1 264 3.4E-132 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 6.4E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 6.4E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 6.4E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 6.4E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS03580 17a55a3e2a6a9fe0a47258fb65d8712a 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 6.4E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 159 175 1.6E-26 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 123 143 1.6E-26 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 261 277 1.6E-26 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 180 191 1.6E-26 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 Pfam PF16485 Protealysin propeptide 5 46 4.9E-21 T 28-03-2018 IPR032475 Protealysin, N-terminal propeptide DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 172 338 2.3E-49 T 28-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 Gene3D G3DSA:3.10.170.10 1 171 1.4E-60 T 28-03-2018 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 Gene3D G3DSA:1.10.390.10 173 339 1.1E-53 T 28-03-2018 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 SUPERFAMILY SSF55486 58 338 8.06E-84 T 28-03-2018 DDI_RS13990 289e035af1fbf33ed52f0e94aa0c347e 349 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 60 168 1.3E-29 T 28-03-2018 IPR013856 Peptidase M4 domain GO:0004222 DDI_RS21215 e00ab51b63b344c85a247414c8373c48 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 251 3.1E-117 T 28-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 DDI_RS21215 e00ab51b63b344c85a247414c8373c48 253 Pfam PF01048 Phosphorylase superfamily 19 239 1.5E-39 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDI_RS21215 e00ab51b63b344c85a247414c8373c48 253 SUPERFAMILY SSF53167 4 250 1.57E-70 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDI_RS21215 e00ab51b63b344c85a247414c8373c48 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS21215 e00ab51b63b344c85a247414c8373c48 253 Gene3D G3DSA:3.40.50.1580 1 252 1.5E-55 T 28-03-2018 DDI_RS11785 0b69c9706c334758760f3a9c3d5fdb57 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 29.972 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 DDI_RS11785 0b69c9706c334758760f3a9c3d5fdb57 194 Pfam PF02545 Maf-like protein 3 186 4.5E-45 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 DDI_RS11785 0b69c9706c334758760f3a9c3d5fdb57 194 SUPERFAMILY SSF52972 2 186 3.92E-58 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDI_RS11785 0b69c9706c334758760f3a9c3d5fdb57 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 185 2.4E-56 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 DDI_RS11785 0b69c9706c334758760f3a9c3d5fdb57 194 Gene3D G3DSA:3.90.950.10 2 194 2.4E-56 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDI_RS11785 0b69c9706c334758760f3a9c3d5fdb57 194 PIRSF PIRSF006305 1 192 4.6E-42 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 DDI_RS07465 1f6236a7e06f569c563a13d7d9d902a5 433 ProSitePatterns PS00503 Pectinesterase signature 2. 287 296 - T 28-03-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 DDI_RS07465 1f6236a7e06f569c563a13d7d9d902a5 433 Pfam PF01095 Pectinesterase 201 360 1.0E-16 T 28-03-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 DDI_RS07465 1f6236a7e06f569c563a13d7d9d902a5 433 Gene3D G3DSA:2.160.20.10 79 429 2.6E-54 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS07465 1f6236a7e06f569c563a13d7d9d902a5 433 SUPERFAMILY SSF51126 84 164 3.14E-43 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS07465 1f6236a7e06f569c563a13d7d9d902a5 433 SUPERFAMILY SSF51126 199 389 3.14E-43 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 Pfam PF01546 Peptidase family M20/M25/M40 89 415 2.9E-26 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 SUPERFAMILY SSF55031 225 336 8.5E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 SUPERFAMILY SSF53187 15 235 1.49E-80 T 28-03-2018 DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 SUPERFAMILY SSF53187 348 420 1.49E-80 T 28-03-2018 DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 34 418 8.8E-113 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 PIRSF PIRSF001235 16 420 4.2E-127 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 Pfam PF07687 Peptidase dimerisation domain 224 325 1.3E-6 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 Gene3D G3DSA:3.40.630.10 258 420 6.9E-17 T 28-03-2018 DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 88 97 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDI_RS15165 34249be4bc0d830ad13bdfee3a85c267 421 Gene3D G3DSA:3.40.630.10 14 257 9.5E-41 T 28-03-2018 DDI_RS19510 365dc993d3185781942980959ef4c936 326 Pfam PF00005 ABC transporter 24 181 2.1E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19510 365dc993d3185781942980959ef4c936 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 9.6E-26 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS19510 365dc993d3185781942980959ef4c936 326 SMART SM00382 32 231 1.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19510 365dc993d3185781942980959ef4c936 326 Gene3D G3DSA:3.40.50.300 1 323 5.1E-74 T 28-03-2018 DDI_RS19510 365dc993d3185781942980959ef4c936 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS19510 365dc993d3185781942980959ef4c936 326 SUPERFAMILY SSF52540 32 304 1.36E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19510 365dc993d3185781942980959ef4c936 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.2E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS07310 c6bc1274d202ae517e0182c26d430b63 446 Gene3D G3DSA:3.90.1150.10 327 446 1.2E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS07310 c6bc1274d202ae517e0182c26d430b63 446 SUPERFAMILY SSF53383 40 441 1.89E-104 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS07310 c6bc1274d202ae517e0182c26d430b63 446 PIRSF PIRSF000521 26 147 1.1E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS07310 c6bc1274d202ae517e0182c26d430b63 446 PIRSF PIRSF000521 201 444 3.6E-28 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS07310 c6bc1274d202ae517e0182c26d430b63 446 Gene3D G3DSA:3.40.640.10 195 326 8.5E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS07310 c6bc1274d202ae517e0182c26d430b63 446 Gene3D G3DSA:3.90.1150.10 6 186 1.1E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS07310 c6bc1274d202ae517e0182c26d430b63 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 292 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS07310 c6bc1274d202ae517e0182c26d430b63 446 Pfam PF00202 Aminotransferase class-III 48 441 1.9E-75 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS04225 bdb2c39259d1177ae3f2adf344436875 165 SUPERFAMILY SSF54427 44 155 4.61E-25 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS04225 bdb2c39259d1177ae3f2adf344436875 165 Pfam PF12680 SnoaL-like domain 51 147 3.9E-13 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain DDI_RS04225 bdb2c39259d1177ae3f2adf344436875 165 Gene3D G3DSA:3.10.450.50 39 165 9.9E-27 T 28-03-2018 DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.8E-24 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 SUPERFAMILY SSF100950 73 233 1.01E-29 T 28-03-2018 DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 SMART SM01134 72 233 6.5E-72 T 28-03-2018 DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 SUPERFAMILY SSF46785 3 73 1.05E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 SMART SM00420 6 58 9.5E-27 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 Gene3D G3DSA:3.40.50.1360 73 238 1.5E-40 T 28-03-2018 DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.8E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.8E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 7.2E-54 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 Gene3D G3DSA:1.10.10.10 1 70 3.1E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18505 10ae1ef848c37a4423407215f005d1f4 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDI_RS16535 c12cce15c4f56afeff425f4861df68cb 378 SUPERFAMILY SSF56796 5 375 1.05E-97 T 28-03-2018 DDI_RS16535 c12cce15c4f56afeff425f4861df68cb 378 Gene3D G3DSA:3.40.50.1970 5 177 2.2E-33 T 28-03-2018 DDI_RS16535 c12cce15c4f56afeff425f4861df68cb 378 Gene3D G3DSA:1.20.1090.10 178 378 4.0E-57 T 28-03-2018 DDI_RS16535 c12cce15c4f56afeff425f4861df68cb 378 Pfam PF00465 Iron-containing alcohol dehydrogenase 6 370 1.2E-101 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDI_RS11460 d2e57e8a42491a6b7eabca04ef4488a4 541 Pfam PF02470 MlaD protein 36 127 2.6E-10 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS11460 d2e57e8a42491a6b7eabca04ef4488a4 541 Pfam PF02470 MlaD protein 151 211 1.3E-8 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS11460 d2e57e8a42491a6b7eabca04ef4488a4 541 Pfam PF02470 MlaD protein 279 383 1.1E-12 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS11460 d2e57e8a42491a6b7eabca04ef4488a4 541 Gene3D G3DSA:1.20.120.330 346 525 2.5E-4 T 28-03-2018 DDI_RS16795 7c2591923c0a56b5fe10123961d43422 601 Gene3D G3DSA:2.30.38.10 391 463 3.5E-21 T 28-03-2018 DDI_RS16795 7c2591923c0a56b5fe10123961d43422 601 Gene3D G3DSA:3.40.50.980 9 192 5.0E-35 T 28-03-2018 DDI_RS16795 7c2591923c0a56b5fe10123961d43422 601 Pfam PF00501 AMP-binding enzyme 16 470 2.2E-93 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS16795 7c2591923c0a56b5fe10123961d43422 601 Gene3D G3DSA:3.40.50.980 193 390 2.6E-39 T 28-03-2018 DDI_RS16795 7c2591923c0a56b5fe10123961d43422 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS16795 7c2591923c0a56b5fe10123961d43422 601 SUPERFAMILY SSF56801 340 599 5.1E-114 T 28-03-2018 DDI_RS16795 7c2591923c0a56b5fe10123961d43422 601 SUPERFAMILY SSF56801 10 289 5.1E-114 T 28-03-2018 DDI_RS16795 7c2591923c0a56b5fe10123961d43422 601 Gene3D G3DSA:3.30.300.30 465 601 8.4E-16 T 28-03-2018 DDI_RS20955 91ce964f3f0bb93c0d83072f172d020f 441 SUPERFAMILY SSF52540 137 253 1.23E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20955 91ce964f3f0bb93c0d83072f172d020f 441 SUPERFAMILY SSF52540 3 96 1.23E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20955 91ce964f3f0bb93c0d83072f172d020f 441 Pfam PF03567 Sulfotransferase family 3 254 1.4E-9 T 28-03-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 DDI_RS20955 91ce964f3f0bb93c0d83072f172d020f 441 Gene3D G3DSA:3.40.50.300 4 262 6.7E-9 T 28-03-2018 DDI_RS05965 51d63e2f29cbb447990d6a46bd52fe3e 337 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 319 1.0E-54 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS05965 51d63e2f29cbb447990d6a46bd52fe3e 337 Gene3D G3DSA:3.40.50.1100 48 145 4.7E-29 T 28-03-2018 DDI_RS05965 51d63e2f29cbb447990d6a46bd52fe3e 337 SUPERFAMILY SSF53686 4 332 2.88E-87 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS05965 51d63e2f29cbb447990d6a46bd52fe3e 337 Gene3D G3DSA:3.40.50.1100 146 334 3.0E-30 T 28-03-2018 DDI_RS05965 51d63e2f29cbb447990d6a46bd52fe3e 337 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 9 328 1.4E-97 T 28-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 DDI_RS05965 51d63e2f29cbb447990d6a46bd52fe3e 337 PIRSF PIRSF006278 1 336 3.6E-102 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase DDI_RS19110 af999ecdeb2e1842953c273f95cdd49d 161 Pfam PF03737 Aldolase/RraA 5 152 1.5E-36 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DDI_RS19110 af999ecdeb2e1842953c273f95cdd49d 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 6.6E-62 T 28-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 DDI_RS19110 af999ecdeb2e1842953c273f95cdd49d 161 SUPERFAMILY SSF89562 2 158 9.81E-44 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DDI_RS19110 af999ecdeb2e1842953c273f95cdd49d 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 3.8E-87 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 DDI_RS19110 af999ecdeb2e1842953c273f95cdd49d 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.457 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 DDI_RS19110 af999ecdeb2e1842953c273f95cdd49d 161 Gene3D G3DSA:3.50.30.40 1 158 6.1E-36 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DDI_RS12545 4417428aba389e0b70173c5118538367 434 Gene3D G3DSA:1.20.1250.20 13 224 1.0E-32 T 28-03-2018 DDI_RS12545 4417428aba389e0b70173c5118538367 434 SUPERFAMILY SSF103473 17 429 9.02E-74 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS12545 4417428aba389e0b70173c5118538367 434 Pfam PF07690 Major Facilitator Superfamily 29 363 2.3E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS12545 4417428aba389e0b70173c5118538367 434 Gene3D G3DSA:1.20.1250.20 239 433 7.1E-16 T 28-03-2018 DDI_RS08630 28511c6a400e05b2c0e9211909ed02df 254 Gene3D G3DSA:3.20.20.380 1 251 1.9E-86 T 28-03-2018 DDI_RS08630 28511c6a400e05b2c0e9211909ed02df 254 SUPERFAMILY SSF110395 3 243 4.18E-74 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 DDI_RS08630 28511c6a400e05b2c0e9211909ed02df 254 Pfam PF03932 CutC family 3 200 8.1E-74 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 DDI_RS08630 28511c6a400e05b2c0e9211909ed02df 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 38.176 T 28-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 DDI_RS19030 3acf6ad15e501a31bafd28e7e6d499c2 124 Pfam PF07226 Protein of unknown function (DUF1422) 3 115 5.3E-53 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 DDI_RS19030 3acf6ad15e501a31bafd28e7e6d499c2 124 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 3 115 1.0E-38 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 DDI_RS07965 c5d58b65b7f13aca9d517a2b3043f364 159 Pfam PF10722 Putative bacterial sensory transduction regulator 9 133 5.4E-15 T 28-03-2018 IPR019660 Putative sensory transduction regulator YbjN DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 Gene3D G3DSA:3.40.50.300 304 577 3.3E-46 T 28-03-2018 DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 SUPERFAMILY SSF52540 7 249 1.3E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 PIRSF PIRSF001327 1 578 1.0E-257 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 Pfam PF02374 Anion-transporting ATPase 324 471 2.0E-31 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 Pfam PF02374 Anion-transporting ATPase 10 287 1.4E-83 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 Pfam PF02374 Anion-transporting ATPase 478 576 6.8E-6 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 289 1.5E-91 T 28-03-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 Gene3D G3DSA:3.40.50.300 1 289 2.1E-59 T 28-03-2018 DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 SUPERFAMILY SSF52540 322 570 1.72E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 SMART SM00382 7 221 4.6 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 SMART SM00382 321 513 0.085 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05695 d466ee85b6faff129eee6e00879ec427 578 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 565 4.1E-276 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 4.6E-51 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 Gene3D G3DSA:3.40.50.720 1 182 1.7E-37 T 28-03-2018 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 PIRSF PIRSF000114 1 336 1.9E-97 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 161 5.9E-49 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 Gene3D G3DSA:1.10.1040.10 193 339 2.3E-52 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 37.708 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 SUPERFAMILY SSF51735 8 182 2.8E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 DDI_RS21180 2d47a6923da76edcae7e8818d7444ba6 339 SUPERFAMILY SSF48179 184 335 1.53E-56 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 Pfam PF01493 GXGXG motif 1236 1419 5.0E-75 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 SUPERFAMILY SSF69336 1211 1465 7.98E-88 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 Gene3D G3DSA:2.160.20.60 1211 1485 4.1E-95 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 Pfam PF01645 Conserved region in glutamate synthase 792 1156 4.1E-157 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 Gene3D G3DSA:3.60.20.10 12 435 8.1E-145 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 Gene3D G3DSA:3.20.20.70 779 1207 1.1E-144 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 SUPERFAMILY SSF56235 12 428 2.93E-149 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 424 2.2E-175 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 Pfam PF04898 Glutamate synthase central domain 456 736 6.1E-104 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 SUPERFAMILY SSF51395 433 1190 2.01E-250 T 28-03-2018 DDI_RS00355 1955ae78a05e5bd29eea45160136b555 1486 Gene3D G3DSA:3.20.20.70 437 778 2.2E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 Gene3D G3DSA:3.40.50.2300 2 135 8.2E-38 T 28-03-2018 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 SMART SM00448 4 115 3.7E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 Pfam PF00158 Sigma-54 interaction domain 141 307 1.2E-69 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 Gene3D G3DSA:3.40.50.300 136 313 2.7E-29 T 28-03-2018 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 Pfam PF00072 Response regulator receiver domain 6 115 1.7E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 7.9E-244 T 28-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 SMART SM00382 161 312 2.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 SUPERFAMILY SSF52172 6 186 5.98E-48 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 SUPERFAMILY SSF46689 381 470 1.57E-24 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 Gene3D G3DSA:1.10.10.60 384 470 7.5E-27 T 28-03-2018 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 Gene3D G3DSA:1.10.8.60 314 383 8.4E-23 T 28-03-2018 DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 SUPERFAMILY SSF52540 140 384 8.25E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19820 6bba95ce5310db3bbed9c91e725b2009 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.7E-15 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS04490 d21985b733ddd95d31309ee684176453 270 Pfam PF01963 TraB family 32 266 1.6E-33 T 28-03-2018 IPR002816 Pheromone shutdown, TraB DDI_RS04890 fe4d943d08e3ab79a0231dfff8e55985 509 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 494 24.462 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DDI_RS04890 fe4d943d08e3ab79a0231dfff8e55985 509 Gene3D G3DSA:3.60.110.10 219 485 3.5E-40 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS04890 fe4d943d08e3ab79a0231dfff8e55985 509 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 457 1.2E-113 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DDI_RS04890 fe4d943d08e3ab79a0231dfff8e55985 509 Pfam PF00795 Carbon-nitrogen hydrolase 224 475 6.0E-40 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS04890 fe4d943d08e3ab79a0231dfff8e55985 509 SUPERFAMILY SSF56317 216 489 7.33E-41 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 SUPERFAMILY SSF52540 72 352 6.05E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 Gene3D G3DSA:3.40.50.300 5 220 7.2E-58 T 28-03-2018 DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 Pfam PF03880 DbpA RNA binding domain 384 454 1.7E-23 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 SMART SM00490 255 336 2.9E-29 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 Gene3D G3DSA:3.40.50.300 221 452 1.7E-43 T 28-03-2018 DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 SMART SM00487 22 219 9.9E-60 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 4.7E-47 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 67.217 T 28-03-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DDI_RS09680 7a44e3d3ad97d734e4d8031c88a803cf 457 Pfam PF00271 Helicase conserved C-terminal domain 228 336 1.0E-28 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 43.156 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 Pfam PF02274 Amidinotransferase 18 403 6.1E-104 T 28-03-2018 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 6.0E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 6.0E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 6.0E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 6.0E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 6.0E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 6.0E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 SUPERFAMILY SSF55909 5 404 6.28E-128 T 28-03-2018 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 TIGRFAM TIGR01078 arcA: arginine deiminase 5 406 1.5E-159 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 PIRSF PIRSF006356 1 406 3.2E-147 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DDI_RS00770 705078c70aa8a6fb7465dfa94ac41cd8 406 Gene3D G3DSA:3.75.10.10 5 404 5.7E-96 T 28-03-2018 DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 143 0.0095 T 28-03-2018 DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 Pfam PF00106 short chain dehydrogenase 6 191 2.8E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 SUPERFAMILY SSF51735 4 223 4.15E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 7.8E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.8E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.8E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.8E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.8E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 PIRSF PIRSF000126 1 260 1.2E-70 T 28-03-2018 DDI_RS03365 b31a7494253470ed52acdc93cb90b0b3 260 Gene3D G3DSA:3.40.50.720 1 260 1.0E-51 T 28-03-2018 DDI_RS08755 79535622240c0d2612671bacc00de592 392 SUPERFAMILY SSF51246 319 391 5.18E-19 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDI_RS08755 79535622240c0d2612671bacc00de592 392 Gene3D G3DSA:3.40.50.20 14 112 7.0E-22 T 28-03-2018 DDI_RS08755 79535622240c0d2612671bacc00de592 392 Pfam PF02222 ATP-grasp domain 123 295 1.1E-53 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DDI_RS08755 79535622240c0d2612671bacc00de592 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 7.9E-186 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 DDI_RS08755 79535622240c0d2612671bacc00de592 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.496 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 DDI_RS08755 79535622240c0d2612671bacc00de592 392 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 81 6.5E-5 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS08755 79535622240c0d2612671bacc00de592 392 Gene3D G3DSA:3.30.1490.20 129 196 1.1E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS08755 79535622240c0d2612671bacc00de592 392 Gene3D G3DSA:3.30.470.20 197 390 1.9E-32 T 28-03-2018 DDI_RS08755 79535622240c0d2612671bacc00de592 392 SUPERFAMILY SSF52440 4 112 1.44E-37 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS08755 79535622240c0d2612671bacc00de592 392 SUPERFAMILY SSF56059 113 314 4.42E-53 T 28-03-2018 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 SMART SM00304 293 347 1.8E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 SUPERFAMILY SSF58104 315 596 4.71E-72 T 28-03-2018 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 Pfam PF00672 HAMP domain 296 342 1.1E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 562 6.8E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 Gene3D G3DSA:1.10.287.950 403 596 1.6E-47 T 28-03-2018 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 Gene3D G3DSA:1.10.287.950 289 402 3.4E-14 T 28-03-2018 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 Gene3D G3DSA:3.30.450.20 28 156 1.1E-21 T 28-03-2018 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 473 1.2E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 523 552 1.2E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 398 1.2E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 475 504 1.2E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 SMART SM00283 348 595 1.3E-81 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 Gene3D G3DSA:3.30.450.20 157 270 1.1E-20 T 28-03-2018 DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 SUPERFAMILY SSF103190 113 176 5.89E-12 T 28-03-2018 IPR029151 Periplasmic sensor domain-like DDI_RS04055 14d01b369419a1b2cd63e7fd4dd74c85 596 Pfam PF02743 Cache domain 33 255 1.5E-23 T 28-03-2018 IPR033479 Double Cache domain 1 DDI_RS18055 2d04b2c7d8e512c46e3abf002852bfe2 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.1E-24 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18055 2d04b2c7d8e512c46e3abf002852bfe2 63 Pfam PF00831 Ribosomal L29 protein 4 60 9.8E-24 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18055 2d04b2c7d8e512c46e3abf002852bfe2 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 28-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18055 2d04b2c7d8e512c46e3abf002852bfe2 63 Gene3D G3DSA:1.10.287.310 1 63 1.7E-23 T 28-03-2018 DDI_RS18055 2d04b2c7d8e512c46e3abf002852bfe2 63 SUPERFAMILY SSF46561 1 61 2.09E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18055 2d04b2c7d8e512c46e3abf002852bfe2 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.806 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS02360 7d3153bfbf7b0148a55b520189a65802 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 251 2.4E-26 T 28-03-2018 IPR017703 YgfZ/GcvT conserved site DDI_RS02360 7d3153bfbf7b0148a55b520189a65802 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 47.519 T 28-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 DDI_RS02360 7d3153bfbf7b0148a55b520189a65802 326 Gene3D G3DSA:3.30.70.1400 26 239 2.8E-24 T 28-03-2018 DDI_RS02360 7d3153bfbf7b0148a55b520189a65802 326 SUPERFAMILY SSF101790 243 325 6.08E-27 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain DDI_RS02360 7d3153bfbf7b0148a55b520189a65802 326 SUPERFAMILY SSF103025 16 241 5.34E-61 T 28-03-2018 DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 Gene3D G3DSA:1.10.10.10 2 76 4.8E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 Pfam PF07729 FCD domain 99 226 1.5E-18 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 SUPERFAMILY SSF48008 95 235 1.86E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 SUPERFAMILY SSF46785 6 77 3.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 SMART SM00345 15 74 3.0E-29 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 Gene3D G3DSA:1.20.120.530 79 245 1.2E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS16610 c7cfa66fd23a2dcc6fe722c7805c6663 254 SMART SM00895 99 227 3.0E-19 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS19020 fcbd8affa73d8cc9c7cac908e43c9b26 625 SUPERFAMILY SSF56935 33 625 2.44E-123 T 28-03-2018 DDI_RS19020 fcbd8affa73d8cc9c7cac908e43c9b26 625 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 3 625 35.209 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 DDI_RS19020 fcbd8affa73d8cc9c7cac908e43c9b26 625 Pfam PF00593 TonB dependent receptor 242 624 3.3E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS19020 fcbd8affa73d8cc9c7cac908e43c9b26 625 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 608 625 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site DDI_RS19020 fcbd8affa73d8cc9c7cac908e43c9b26 625 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 10 625 2.6E-223 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 DDI_RS19020 fcbd8affa73d8cc9c7cac908e43c9b26 625 Gene3D G3DSA:2.40.170.20 160 625 2.1E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS19020 fcbd8affa73d8cc9c7cac908e43c9b26 625 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 153 2.1E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS19020 fcbd8affa73d8cc9c7cac908e43c9b26 625 Gene3D G3DSA:2.170.130.10 25 159 1.8E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS13355 865e7bd39a5ebd4480bf374838560c75 240 SUPERFAMILY SSF161098 14 219 3.01E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13355 865e7bd39a5ebd4480bf374838560c75 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 122 1.2E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS13355 865e7bd39a5ebd4480bf374838560c75 240 Gene3D G3DSA:1.10.3720.10 4 233 2.2E-31 T 28-03-2018 DDI_RS13355 865e7bd39a5ebd4480bf374838560c75 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 227 4.0E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 Pfam PF02203 Tar ligand binding domain homologue 1 151 2.9E-17 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 SUPERFAMILY SSF47170 31 152 1.52E-7 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 SUPERFAMILY SSF58104 238 518 1.57E-62 T 28-03-2018 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 2.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 2.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 2.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 2.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 Gene3D G3DSA:1.20.120.30 23 191 1.1E-20 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 Gene3D G3DSA:1.10.287.1060 223 321 0.042 T 28-03-2018 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 Gene3D G3DSA:1.10.287.950 322 521 9.2E-43 T 28-03-2018 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 SMART SM00283 270 517 9.9E-71 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS17580 61c2e5e93e84d5bf097d241410091e34 530 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 483 4.9E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 Gene3D G3DSA:3.40.50.300 2 272 3.1E-44 T 28-03-2018 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 4 275 2.2E-138 T 28-03-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 PIRSF PIRSF000363 2 278 2.2E-124 T 28-03-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 Hamap MF_00533 Nitrogenase iron protein [nifH]. 3 276 51.994 T 28-03-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 4 278 8.8E-145 T 28-03-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 SUPERFAMILY SSF52540 3 276 1.87E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 PRINTS PR00091 Nitrogenase component II signature 9 22 3.2E-37 T 28-03-2018 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 PRINTS PR00091 Nitrogenase component II signature 31 46 3.2E-37 T 28-03-2018 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 PRINTS PR00091 Nitrogenase component II signature 86 100 3.2E-37 T 28-03-2018 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 PRINTS PR00091 Nitrogenase component II signature 125 140 3.2E-37 T 28-03-2018 DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 ProSitePatterns PS00746 NifH/frxC family signature 1. 88 100 - T 28-03-2018 IPR030655 NifH/chlL conserved site DDI_RS17620 19a512b238352dff80cde54e80eb9881 293 ProSitePatterns PS00692 NifH/frxC family signature 2. 126 139 - T 28-03-2018 IPR030655 NifH/chlL conserved site DDI_RS00105 cce9767c3d49dba59e9697d06fe309ea 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 3.0E-60 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS00105 cce9767c3d49dba59e9697d06fe309ea 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 28-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS00105 cce9767c3d49dba59e9697d06fe309ea 150 PIRSF PIRSF001399 3 149 1.1E-57 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS00105 cce9767c3d49dba59e9697d06fe309ea 150 Gene3D G3DSA:3.40.50.9100 2 149 2.3E-65 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS00105 cce9767c3d49dba59e9697d06fe309ea 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 73.622 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS00105 cce9767c3d49dba59e9697d06fe309ea 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.4E-60 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS00105 cce9767c3d49dba59e9697d06fe309ea 150 Pfam PF01220 Dehydroquinase class II 7 142 1.9E-59 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS00105 cce9767c3d49dba59e9697d06fe309ea 150 SUPERFAMILY SSF52304 6 147 1.24E-60 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS03790 913dfbad6714b486ebd760c7f159e742 382 Pfam PF02684 Lipid-A-disaccharide synthetase 8 376 9.2E-143 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 DDI_RS03790 913dfbad6714b486ebd760c7f159e742 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 381 42.644 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 DDI_RS03790 913dfbad6714b486ebd760c7f159e742 382 SUPERFAMILY SSF53756 8 357 1.02E-25 T 28-03-2018 DDI_RS03790 913dfbad6714b486ebd760c7f159e742 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 379 1.0E-170 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 DDI_RS03790 913dfbad6714b486ebd760c7f159e742 382 Gene3D G3DSA:3.40.50.2000 172 363 3.4E-13 T 28-03-2018 DDI_RS06685 37f6a9a08979cef93cc79dc3deff2242 437 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 29 52 4.2E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DDI_RS06685 37f6a9a08979cef93cc79dc3deff2242 437 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 25 435 5.7E-171 T 28-03-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 DDI_RS06685 37f6a9a08979cef93cc79dc3deff2242 437 Pfam PF04261 Dyp-type peroxidase family 76 424 1.0E-112 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DDI_RS06685 37f6a9a08979cef93cc79dc3deff2242 437 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 76 424 3.3E-100 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DDI_RS06685 37f6a9a08979cef93cc79dc3deff2242 437 SUPERFAMILY SSF54909 69 430 4.47E-97 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS11025 e26338e9542d729260ba57053dac3e17 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDI_RS11025 e26338e9542d729260ba57053dac3e17 448 Pfam PF00083 Sugar (and other) transporter 20 448 3.1E-29 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DDI_RS11025 e26338e9542d729260ba57053dac3e17 448 Gene3D G3DSA:1.20.1250.20 7 220 4.8E-25 T 28-03-2018 DDI_RS11025 e26338e9542d729260ba57053dac3e17 448 Gene3D G3DSA:1.20.1250.20 247 448 1.1E-21 T 28-03-2018 DDI_RS11025 e26338e9542d729260ba57053dac3e17 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDI_RS11025 e26338e9542d729260ba57053dac3e17 448 SUPERFAMILY SSF103473 5 447 1.83E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PIRSF PIRSF001480 1 392 7.8E-107 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 Gene3D G3DSA:2.60.120.10 294 391 1.5E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 Gene3D G3DSA:1.10.441.10 162 262 2.5E-28 T 28-03-2018 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 384 1.7E-115 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 SUPERFAMILY SSF51182 1 375 1.48E-101 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 Pfam PF01238 Phosphomannose isomerase type I 1 355 2.3E-98 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 6.0E-71 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 6.0E-71 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 6.0E-71 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 6.0E-71 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 6.0E-71 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 6.0E-71 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 6.0E-71 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 6.0E-71 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 DDI_RS09290 17c4a80cd93e2864e99f983f805c8cf7 394 Gene3D G3DSA:2.60.120.10 5 161 4.4E-50 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS01785 9454e43c727ce8b92f725a9ac049cedc 344 SUPERFAMILY SSF56349 56 324 1.47E-39 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS01785 9454e43c727ce8b92f725a9ac049cedc 344 Pfam PF00589 Phage integrase family 254 315 5.7E-12 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS01785 9454e43c727ce8b92f725a9ac049cedc 344 Pfam PF00589 Phage integrase family 169 243 3.8E-6 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS01785 9454e43c727ce8b92f725a9ac049cedc 344 Gene3D G3DSA:1.10.150.130 50 169 2.1E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS01785 9454e43c727ce8b92f725a9ac049cedc 344 Gene3D G3DSA:1.10.443.10 170 331 1.7E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS13065 698cde1d691979f8eb03850731b33d5e 435 SUPERFAMILY SSF53474 181 424 4.9E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS13065 698cde1d691979f8eb03850731b33d5e 435 SUPERFAMILY SSF81296 17 166 4.62E-44 T 28-03-2018 IPR014756 Immunoglobulin E-set DDI_RS13065 698cde1d691979f8eb03850731b33d5e 435 Pfam PF00756 Putative esterase 194 422 4.1E-31 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DDI_RS13065 698cde1d691979f8eb03850731b33d5e 435 Pfam PF11806 Domain of unknown function (DUF3327) 45 171 2.0E-41 T 28-03-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 DDI_RS13065 698cde1d691979f8eb03850731b33d5e 435 Gene3D G3DSA:3.40.50.1820 162 432 2.4E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS13065 698cde1d691979f8eb03850731b33d5e 435 Gene3D G3DSA:2.60.40.10 16 161 1.5E-44 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS16865 682587abb3b3014bbfbebb2649acd072 33 Pfam PF08049 IlvB leader peptide 4 33 9.4E-12 T 28-03-2018 IPR012566 IlvB leader peptide DDI_RS11330 010c0da7cfdc9f1004ca053740506f9d 67 Pfam PF07338 Protein of unknown function (DUF1471) 21 67 5.3E-10 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS11330 010c0da7cfdc9f1004ca053740506f9d 67 SUPERFAMILY SSF159871 12 67 2.22E-10 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS11330 010c0da7cfdc9f1004ca053740506f9d 67 Gene3D G3DSA:3.30.1660.10 6 67 8.0E-10 T 28-03-2018 IPR025543 Dodecin-like DDI_RS04920 4d7c047ac80a711776c9d479806f69b1 109 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.2E-29 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DDI_RS04920 4d7c047ac80a711776c9d479806f69b1 109 SUPERFAMILY SSF103481 5 105 4.05E-23 T 28-03-2018 DDI_RS15735 6045bfd6dfe0b8c39e50cc93342b3749 130 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 8.1E-38 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15735 6045bfd6dfe0b8c39e50cc93342b3749 130 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.662 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDI_RS15735 6045bfd6dfe0b8c39e50cc93342b3749 130 SUPERFAMILY SSF54995 1 103 2.22E-37 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15735 6045bfd6dfe0b8c39e50cc93342b3749 130 Gene3D G3DSA:3.30.70.60 1 100 4.7E-30 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DDI_RS15735 6045bfd6dfe0b8c39e50cc93342b3749 130 Pfam PF01250 Ribosomal protein S6 3 91 4.2E-27 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15735 6045bfd6dfe0b8c39e50cc93342b3749 130 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 28-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 SUPERFAMILY SSF58104 244 528 8.37E-74 T 28-03-2018 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 490 1.7E-55 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 Gene3D G3DSA:1.10.287.950 173 328 7.6E-12 T 28-03-2018 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 Gene3D G3DSA:1.20.120.30 48 172 4.6E-14 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 Pfam PF02203 Tar ligand binding domain homologue 11 177 6.1E-23 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 Gene3D G3DSA:1.10.287.950 329 528 3.3E-49 T 28-03-2018 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 SUPERFAMILY SSF47170 35 164 5.1E-10 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 SMART SM00283 277 524 3.5E-95 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 Pfam PF00672 HAMP domain 224 271 2.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 SMART SM00304 224 276 2.1E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 1.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 1.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 14 39 1.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17135 2425628f688dd6c6ae83a50d92b8b949 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.7E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1221 0.0 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 Pfam PF12705 PD-(D/E)XK nuclease superfamily 994 1199 1.0E-7 T 28-03-2018 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 Gene3D G3DSA:3.90.320.10 920 1229 2.2E-73 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 458 4.5E-55 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 Gene3D G3DSA:3.40.50.300 542 880 5.4E-42 T 28-03-2018 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1222 21.676 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 SUPERFAMILY SSF52980 975 1223 1.29E-70 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 SUPERFAMILY SSF52980 927 940 1.29E-70 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 Pfam PF13361 UvrD-like helicase C-terminal domain 758 852 1.5E-13 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 SUPERFAMILY SSF52540 13 82 1.54E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 SUPERFAMILY SSF52540 131 215 1.54E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 SUPERFAMILY SSF52540 344 518 1.54E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 SUPERFAMILY SSF52540 552 801 1.54E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 SUPERFAMILY SSF52540 832 856 1.54E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 Gene3D G3DSA:1.10.3170.10 168 357 2.5E-49 T 28-03-2018 DDI_RS09690 3b64f44ae2a93422622bac260db17fbc 1229 Gene3D G3DSA:3.40.50.300 358 438 0.0029 T 28-03-2018 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.3E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.3E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.3E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.3E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 Gene3D G3DSA:3.40.50.620 1 305 1.5E-92 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 SUPERFAMILY SSF52374 1 313 7.42E-102 T 28-03-2018 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.58 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 Gene3D G3DSA:1.20.120.640 306 392 2.3E-23 T 28-03-2018 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 SUPERFAMILY SSF47323 316 460 1.12E-43 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 Pfam PF09190 DALR domain 341 402 1.9E-24 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 SMART SM00840 341 402 8.9E-28 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 2.3E-193 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DDI_RS13455 a03b363451d20d9cfd62eec278bcebd3 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.6E-143 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 SUPERFAMILY SSF82693 145 190 1.18E-19 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 SUPERFAMILY SSF82693 276 332 1.18E-19 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 Gene3D G3DSA:1.20.1640.10 805 1013 4.2E-33 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 SUPERFAMILY SSF82693 556 649 1.83E-6 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 8.7E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 8.7E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 8.7E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 8.7E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 8.7E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.7E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 8.7E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 Gene3D G3DSA:3.30.2090.10 706 796 3.0E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 Gene3D G3DSA:3.30.2090.10 189 275 7.5E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 SUPERFAMILY SSF82714 708 794 8.76E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 SUPERFAMILY SSF82693 48 142 2.51E-16 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 SUPERFAMILY SSF82866 792 1014 6.54E-43 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 Pfam PF00873 AcrB/AcrD/AcrF family 13 1005 2.6E-164 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 Gene3D G3DSA:3.30.70.1430 48 152 1.8E-28 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 Gene3D G3DSA:3.30.70.1430 557 657 1.8E-9 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 SUPERFAMILY SSF82714 193 270 3.14E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 Gene3D G3DSA:1.20.1640.10 289 510 5.3E-30 T 28-03-2018 DDI_RS03285 8c2b7f42bd4357842e7ad5199ea63a40 1021 SUPERFAMILY SSF82866 300 497 2.22E-32 T 28-03-2018 DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 SUPERFAMILY SSF49452 318 399 1.2E-7 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 SUPERFAMILY SSF49785 411 568 1.36E-22 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 Gene3D G3DSA:2.60.40.1120 316 405 5.5E-7 T 28-03-2018 DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 Pfam PF14683 Polysaccharide lyase family 4, domain III 413 567 3.1E-26 T 28-03-2018 IPR029411 Rhamnogalacturonan lyase, domain III DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 Gene3D G3DSA:2.60.120.260 408 570 4.7E-32 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 Pfam PF06045 Rhamnogalacturonate lyase family 18 160 5.5E-6 T 28-03-2018 IPR010325 Rhamnogalacturonate lyase DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 Pfam PF14686 Polysaccharide lyase family 4, domain II 340 396 8.5E-11 T 28-03-2018 IPR029413 Rhamnogalacturonan lyase, domain II DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 SUPERFAMILY SSF74650 63 286 1.32E-10 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS09230 fd2742ed607b0832a1bbfa6e00988df7 570 Gene3D G3DSA:2.70.98.10 26 305 1.9E-51 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDI_RS04900 815e443c6998a1cf10a600de7c4885fb 161 Gene3D G3DSA:3.40.390.30 1 155 1.3E-54 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 DDI_RS04900 815e443c6998a1cf10a600de7c4885fb 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 1.2E-37 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DDI_RS04900 815e443c6998a1cf10a600de7c4885fb 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 28-03-2018 IPR020549 Endoribonuclease YbeY, conserved site DDI_RS04900 815e443c6998a1cf10a600de7c4885fb 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.576 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DDI_RS04900 815e443c6998a1cf10a600de7c4885fb 161 SUPERFAMILY SSF55486 2 150 1.15E-49 T 28-03-2018 DDI_RS04900 815e443c6998a1cf10a600de7c4885fb 161 Pfam PF02130 Uncharacterized protein family UPF0054 21 143 2.0E-40 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DDI_RS02555 df26148428e9753b960bc84099ae9985 273 Gene3D G3DSA:3.60.21.10 1 255 1.1E-33 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS02555 df26148428e9753b960bc84099ae9985 273 Pfam PF00149 Calcineurin-like phosphoesterase 3 197 1.6E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDI_RS02555 df26148428e9753b960bc84099ae9985 273 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 253 35.848 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 DDI_RS02555 df26148428e9753b960bc84099ae9985 273 SUPERFAMILY SSF56300 1 257 3.65E-53 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS18920 798712ac487cba39c5a1b75e832ad21a 246 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 8 222 6.3E-35 T 28-03-2018 IPR012808 Conserved hypothetical protein CHP02453 DDI_RS18920 798712ac487cba39c5a1b75e832ad21a 246 PIRSF PIRSF028451 4 227 8.4E-34 T 28-03-2018 IPR015996 Uncharacterised conserved protein UCP028451 DDI_RS18920 798712ac487cba39c5a1b75e832ad21a 246 Pfam PF09365 Conserved hypothetical protein (DUF2461) 11 218 1.8E-50 T 28-03-2018 IPR012808 Conserved hypothetical protein CHP02453 DDI_RS12890 41dfb749f9cde9718bb2559e646d4b08 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 1.6E-142 T 28-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane DDI_RS14525 36d3ee89947b4210d391b74746e1a8a0 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 5.1E-45 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDI_RS14525 36d3ee89947b4210d391b74746e1a8a0 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.0E-37 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDI_RS14525 36d3ee89947b4210d391b74746e1a8a0 162 SUPERFAMILY SSF55083 2 159 1.31E-53 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDI_RS14525 36d3ee89947b4210d391b74746e1a8a0 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDI_RS14525 36d3ee89947b4210d391b74746e1a8a0 162 Gene3D G3DSA:3.30.70.560 1 157 8.9E-56 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDI_RS15540 df08d209535579ffcaa6c5e0c1c60f71 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 71.791 T 28-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 DDI_RS15540 df08d209535579ffcaa6c5e0c1c60f71 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 21 244 3.9E-58 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DDI_RS15540 df08d209535579ffcaa6c5e0c1c60f71 256 Gene3D G3DSA:3.20.20.60 5 253 2.0E-45 T 28-03-2018 DDI_RS15540 df08d209535579ffcaa6c5e0c1c60f71 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 5.9E-147 T 28-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 DDI_RS15540 df08d209535579ffcaa6c5e0c1c60f71 256 SUPERFAMILY SSF51621 3 255 1.54E-83 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 Gene3D G3DSA:3.40.50.300 1 264 7.8E-54 T 28-03-2018 DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 Gene3D G3DSA:3.40.50.300 265 501 4.6E-42 T 28-03-2018 DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 Pfam PF00005 ABC transporter 269 423 3.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 Pfam PF00005 ABC transporter 22 169 4.7E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 SMART SM00382 29 226 9.9E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 SMART SM00382 277 472 5.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 SUPERFAMILY SSF52540 266 482 3.81E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 SUPERFAMILY SSF52540 3 231 1.42E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19920 c441bd0f2b7ff7b711b7124f312c8b9d 505 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS00165 9e1a6917fef79cb98f8788f703edf41b 314 Gene3D G3DSA:3.40.190.10 174 259 2.1E-17 T 28-03-2018 DDI_RS00165 9e1a6917fef79cb98f8788f703edf41b 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS00165 9e1a6917fef79cb98f8788f703edf41b 314 Gene3D G3DSA:1.10.10.10 3 84 2.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00165 9e1a6917fef79cb98f8788f703edf41b 314 SUPERFAMILY SSF46785 4 108 1.65E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00165 9e1a6917fef79cb98f8788f703edf41b 314 Pfam PF03466 LysR substrate binding domain 90 291 5.4E-36 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS00165 9e1a6917fef79cb98f8788f703edf41b 314 Gene3D G3DSA:3.40.190.10 89 173 1.8E-13 T 28-03-2018 DDI_RS00165 9e1a6917fef79cb98f8788f703edf41b 314 SUPERFAMILY SSF53850 90 295 2.48E-38 T 28-03-2018 DDI_RS13505 25640c79ec7d6e1cdc10807e12255eb7 548 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 282 539 8.7E-70 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DDI_RS13505 25640c79ec7d6e1cdc10807e12255eb7 548 SUPERFAMILY SSF161098 292 531 4.45E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13505 25640c79ec7d6e1cdc10807e12255eb7 548 Gene3D G3DSA:1.10.3720.10 1 533 8.3E-43 T 28-03-2018 DDI_RS13505 25640c79ec7d6e1cdc10807e12255eb7 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 316 543 1.6E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 1.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 1.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 55 70 1.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 1.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 Pfam PF02203 Tar ligand binding domain homologue 3 164 1.4E-13 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 SMART SM00283 267 514 1.8E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 SUPERFAMILY SSF47170 32 151 6.15E-9 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 Gene3D G3DSA:1.20.120.30 34 176 4.0E-20 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 Gene3D G3DSA:1.10.287.1060 244 326 0.016 T 28-03-2018 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 SUPERFAMILY SSF58104 237 515 1.57E-71 T 28-03-2018 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 482 6.3E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07855 aba07056230cff3999bbdc9d1eb76f71 556 Gene3D G3DSA:1.10.287.950 327 518 2.2E-47 T 28-03-2018 DDI_RS17030 9c9cbbffe9093c4aafde743c54ea5e88 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.892 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS17030 9c9cbbffe9093c4aafde743c54ea5e88 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.6E-33 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS17030 9c9cbbffe9093c4aafde743c54ea5e88 87 Gene3D G3DSA:1.20.58.110 1 87 1.5E-30 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS17030 9c9cbbffe9093c4aafde743c54ea5e88 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 1.0E-34 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS17030 9c9cbbffe9093c4aafde743c54ea5e88 87 Pfam PF01649 Ribosomal protein S20 2 84 3.6E-29 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS17030 9c9cbbffe9093c4aafde743c54ea5e88 87 SUPERFAMILY SSF46992 3 86 7.19E-33 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS09315 1564d30e3e598331d2d4af1b0802480e 405 Gene3D G3DSA:3.30.420.40 81 204 2.1E-17 T 28-03-2018 DDI_RS09315 1564d30e3e598331d2d4af1b0802480e 405 Pfam PF00480 ROK family 88 389 1.5E-53 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 DDI_RS09315 1564d30e3e598331d2d4af1b0802480e 405 SUPERFAMILY SSF46785 12 77 1.39E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09315 1564d30e3e598331d2d4af1b0802480e 405 Gene3D G3DSA:3.30.420.40 205 392 9.6E-39 T 28-03-2018 DDI_RS09315 1564d30e3e598331d2d4af1b0802480e 405 SUPERFAMILY SSF53067 87 393 7.21E-47 T 28-03-2018 DDI_RS09315 1564d30e3e598331d2d4af1b0802480e 405 Gene3D G3DSA:1.10.10.10 11 80 4.5E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03750 a838572bc0d7bca362b799fa041d43a3 253 SUPERFAMILY SSF64005 15 239 8.11E-89 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DDI_RS03750 a838572bc0d7bca362b799fa041d43a3 253 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 4.6E-80 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DDI_RS03750 a838572bc0d7bca362b799fa041d43a3 253 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 17 243 2.0E-103 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DDI_RS03750 a838572bc0d7bca362b799fa041d43a3 253 Gene3D G3DSA:3.40.1180.10 4 247 1.9E-89 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DDI_RS03750 a838572bc0d7bca362b799fa041d43a3 253 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 40.519 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DDI_RS03750 a838572bc0d7bca362b799fa041d43a3 253 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 DDI_RS02230 ef766356ba5bff2e4cad73be6e5dd9a3 412 Gene3D G3DSA:3.40.50.20 1 111 0.0016 T 28-03-2018 DDI_RS02230 ef766356ba5bff2e4cad73be6e5dd9a3 412 SUPERFAMILY SSF56059 107 288 5.14E-27 T 28-03-2018 DDI_RS02230 ef766356ba5bff2e4cad73be6e5dd9a3 412 Gene3D G3DSA:3.30.470.20 112 313 4.1E-25 T 28-03-2018 DDI_RS02230 ef766356ba5bff2e4cad73be6e5dd9a3 412 Pfam PF13535 ATP-grasp domain 142 284 4.0E-18 T 28-03-2018 DDI_RS09375 417af2b5e0d9c2f9d15f7a5d379c65f8 232 Gene3D G3DSA:2.60.40.760 147 222 3.6E-14 T 28-03-2018 IPR007117 Expansin, cellulose-binding-like domain DDI_RS09375 417af2b5e0d9c2f9d15f7a5d379c65f8 232 SUPERFAMILY SSF49590 138 214 2.09E-10 T 28-03-2018 IPR007117 Expansin, cellulose-binding-like domain DDI_RS09375 417af2b5e0d9c2f9d15f7a5d379c65f8 232 Gene3D G3DSA:2.40.40.10 20 146 1.4E-16 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDI_RS09375 417af2b5e0d9c2f9d15f7a5d379c65f8 232 SUPERFAMILY SSF50685 13 139 7.32E-17 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDI_RS02995 5681abb68d6efaaf01d24dcfd71ad9fb 229 SUPERFAMILY SSF46894 148 213 4.08E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS02995 5681abb68d6efaaf01d24dcfd71ad9fb 229 Gene3D G3DSA:1.10.10.10 122 214 2.9E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02995 5681abb68d6efaaf01d24dcfd71ad9fb 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 200 1.0E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS02995 5681abb68d6efaaf01d24dcfd71ad9fb 229 SMART SM00421 151 208 0.0054 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS18430 4e4f04529bb6aa6ccb15dcf80407da8a 137 PIRSF PIRSF016821 10 137 8.7E-41 T 28-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 DDI_RS18430 4e4f04529bb6aa6ccb15dcf80407da8a 137 SMART SM00363 13 80 5.4E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS18430 4e4f04529bb6aa6ccb15dcf80407da8a 137 Gene3D G3DSA:3.10.290.10 6 109 4.4E-27 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS18430 4e4f04529bb6aa6ccb15dcf80407da8a 137 Pfam PF01479 S4 domain 13 59 7.4E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS18430 4e4f04529bb6aa6ccb15dcf80407da8a 137 SUPERFAMILY SSF55174 13 108 7.46E-29 T 28-03-2018 DDI_RS17220 5388768d8bef951aa7250b34bcfb6e03 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 243 2.2E-83 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS17220 5388768d8bef951aa7250b34bcfb6e03 244 Gene3D G3DSA:2.40.240.20 1 74 6.9E-20 T 28-03-2018 DDI_RS17220 5388768d8bef951aa7250b34bcfb6e03 244 SUPERFAMILY SSF75217 76 243 1.36E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS17220 5388768d8bef951aa7250b34bcfb6e03 244 Gene3D G3DSA:3.40.1280.10 75 244 2.6E-55 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS17220 5388768d8bef951aa7250b34bcfb6e03 244 SUPERFAMILY SSF88697 2 67 2.98E-14 T 28-03-2018 IPR015947 PUA-like domain DDI_RS17220 5388768d8bef951aa7250b34bcfb6e03 244 PIRSF PIRSF015601 3 243 8.6E-49 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS17220 5388768d8bef951aa7250b34bcfb6e03 244 Pfam PF04452 RNA methyltransferase 21 237 9.4E-70 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 SUPERFAMILY SSF53850 92 293 1.27E-41 T 28-03-2018 DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 Pfam PF03466 LysR substrate binding domain 91 293 4.1E-39 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 SUPERFAMILY SSF46785 6 91 1.64E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 Gene3D G3DSA:1.10.10.10 1 87 6.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 Gene3D G3DSA:3.40.190.10 180 268 3.3E-26 T 28-03-2018 DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 7.6E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS15980 1f6dc2d6c183eaad7d16aa21b35410d1 294 Gene3D G3DSA:3.40.190.10 92 179 3.6E-14 T 28-03-2018 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.138 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 SMART SM00876 220 312 1.5E-48 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 SMART SM00729 43 255 2.3E-38 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 8.7E-20 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 PIRSF PIRSF001619 1 319 6.9E-137 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 Pfam PF04055 Radical SAM superfamily 50 202 3.7E-16 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 SUPERFAMILY SSF102114 5 313 7.72E-93 T 28-03-2018 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.3E-122 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDI_RS07140 b9b9a9581ca652f495b405fb7e1084f7 345 Gene3D G3DSA:3.20.20.70 4 315 2.8E-59 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS09515 4c9b3e678d590b19a5fb9ac2aefb965f 866 Pfam PF00391 PEP-utilising enzyme, mobile domain 788 859 5.7E-21 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS09515 4c9b3e678d590b19a5fb9ac2aefb965f 866 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 13 316 1.4E-54 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DDI_RS09515 4c9b3e678d590b19a5fb9ac2aefb965f 866 Gene3D G3DSA:3.30.1490.20 2 179 2.0E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS09515 4c9b3e678d590b19a5fb9ac2aefb965f 866 SUPERFAMILY SSF52009 758 862 3.14E-27 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS09515 4c9b3e678d590b19a5fb9ac2aefb965f 866 Gene3D G3DSA:3.30.470.20 180 316 4.8E-25 T 28-03-2018 DDI_RS09515 4c9b3e678d590b19a5fb9ac2aefb965f 866 Gene3D G3DSA:3.50.30.10 752 863 1.8E-27 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDI_RS09515 4c9b3e678d590b19a5fb9ac2aefb965f 866 SUPERFAMILY SSF56059 4 227 3.77E-44 T 28-03-2018 DDI_RS09515 4c9b3e678d590b19a5fb9ac2aefb965f 866 SUPERFAMILY SSF56059 270 325 3.77E-44 T 28-03-2018 DDI_RS12105 dbbc506bfa41f49169000a366f05bf55 139 PIRSF PIRSF002889 1 137 1.2E-42 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DDI_RS12105 dbbc506bfa41f49169000a366f05bf55 139 Pfam PF00460 Flagella basal body rod protein 9 39 4.0E-12 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DDI_RS12105 dbbc506bfa41f49169000a366f05bf55 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site DDI_RS12105 dbbc506bfa41f49169000a366f05bf55 139 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 3.2E-44 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DDI_RS01340 dc2be3d6ba55d33c60077d7e2b02972f 344 Pfam PF00355 Rieske [2Fe-2S] domain 25 104 1.4E-16 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DDI_RS01340 dc2be3d6ba55d33c60077d7e2b02972f 344 SUPERFAMILY SSF55961 134 340 1.76E-26 T 28-03-2018 DDI_RS01340 dc2be3d6ba55d33c60077d7e2b02972f 344 Gene3D G3DSA:2.102.10.10 19 124 3.9E-26 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DDI_RS01340 dc2be3d6ba55d33c60077d7e2b02972f 344 SUPERFAMILY SSF50022 12 132 1.57E-32 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DDI_RS01340 dc2be3d6ba55d33c60077d7e2b02972f 344 Gene3D G3DSA:3.90.380.10 125 338 1.7E-40 T 28-03-2018 DDI_RS07155 8a4b484f9d6e1c77ad789bf5d6f1253f 226 PIRSF PIRSF006755 1 225 7.4E-80 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDI_RS07155 8a4b484f9d6e1c77ad789bf5d6f1253f 226 Pfam PF13500 AAA domain 6 208 4.5E-38 T 28-03-2018 DDI_RS07155 8a4b484f9d6e1c77ad789bf5d6f1253f 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.2E-61 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDI_RS07155 8a4b484f9d6e1c77ad789bf5d6f1253f 226 SUPERFAMILY SSF52540 4 219 9.18E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07155 8a4b484f9d6e1c77ad789bf5d6f1253f 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.958 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDI_RS07155 8a4b484f9d6e1c77ad789bf5d6f1253f 226 Gene3D G3DSA:3.40.50.300 1 216 2.0E-59 T 28-03-2018 DDI_RS17065 6832c8541421c5974a8525a9002719a2 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 DDI_RS17065 6832c8541421c5974a8525a9002719a2 317 Gene3D G3DSA:3.20.20.70 2 316 2.9E-121 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS17065 6832c8541421c5974a8525a9002719a2 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 5.6E-101 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 DDI_RS17065 6832c8541421c5974a8525a9002719a2 317 SUPERFAMILY SSF51569 1 316 2.2E-115 T 28-03-2018 DDI_RS17065 6832c8541421c5974a8525a9002719a2 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.645 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 DDI_RS17065 6832c8541421c5974a8525a9002719a2 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 6.8E-164 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 DDI_RS17065 6832c8541421c5974a8525a9002719a2 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 DDI_RS07615 3cf333afdc5667de5469df8d2ecfb12f 63 Pfam PF13132 Domain of unknown function (DUF3950) 21 53 8.0E-8 T 28-03-2018 IPR025030 Domain of unknown function DUF3950 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 Pfam PF00696 Amino acid kinase family 13 285 1.8E-44 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 SUPERFAMILY SSF53633 13 300 9.56E-56 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 Gene3D G3DSA:3.30.360.10 631 788 1.6E-49 T 28-03-2018 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 SUPERFAMILY SSF51735 458 631 2.86E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 Pfam PF00742 Homoserine dehydrogenase 613 804 3.9E-42 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 Gene3D G3DSA:3.40.50.720 456 630 2.6E-24 T 28-03-2018 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 PIRSF PIRSF000727 13 811 1.6E-287 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 Gene3D G3DSA:3.40.1160.10 10 280 2.7E-48 T 28-03-2018 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 7.3E-64 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 SUPERFAMILY SSF55347 609 792 9.81E-46 T 28-03-2018 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS19060 9690526099f942928f8d0e16e134c8d1 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 1.4E-21 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DDI_RS16550 767a818a8297e847e348c60140c9b159 391 Pfam PF13088 BNR repeat-like domain 46 370 1.2E-67 T 28-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 DDI_RS16550 767a818a8297e847e348c60140c9b159 391 Gene3D G3DSA:2.120.10.10 18 391 2.3E-63 T 28-03-2018 DDI_RS16550 767a818a8297e847e348c60140c9b159 391 SUPERFAMILY SSF50939 27 277 3.64E-60 T 28-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 DDI_RS16550 767a818a8297e847e348c60140c9b159 391 SUPERFAMILY SSF50939 309 389 3.64E-60 T 28-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 DDI_RS15670 82c78aef44a9e778fb2dd971d5357bf0 438 SUPERFAMILY SSF56176 344 429 1.39E-22 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 DDI_RS15670 82c78aef44a9e778fb2dd971d5357bf0 438 Pfam PF00571 CBS domain 284 333 0.002 T 28-03-2018 IPR000644 CBS domain DDI_RS15670 82c78aef44a9e778fb2dd971d5357bf0 438 SUPERFAMILY SSF54631 200 335 9.62E-21 T 28-03-2018 DDI_RS15670 82c78aef44a9e778fb2dd971d5357bf0 438 Pfam PF01595 Domain of unknown function DUF21 6 197 7.4E-39 T 28-03-2018 IPR002550 Domain of unknown function DUF21 DDI_RS15670 82c78aef44a9e778fb2dd971d5357bf0 438 Pfam PF03471 Transporter associated domain 347 425 1.0E-20 T 28-03-2018 IPR005170 Transporter-associated domain DDI_RS15670 82c78aef44a9e778fb2dd971d5357bf0 438 Gene3D G3DSA:3.30.465.10 345 437 4.5E-23 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 DDI_RS15670 82c78aef44a9e778fb2dd971d5357bf0 438 Gene3D G3DSA:3.10.580.10 193 344 2.0E-20 T 28-03-2018 DDI_RS15670 82c78aef44a9e778fb2dd971d5357bf0 438 SMART SM01091 346 426 5.4E-29 T 28-03-2018 IPR005170 Transporter-associated domain DDI_RS08765 abb1309e7c4d5c858ee0f78ad73391aa 76 SUPERFAMILY SSF46575 1 75 8.5E-32 T 28-03-2018 DDI_RS08765 abb1309e7c4d5c858ee0f78ad73391aa 76 Gene3D G3DSA:1.20.58.250 3 65 2.0E-30 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS08765 abb1309e7c4d5c858ee0f78ad73391aa 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 73 8.0E-24 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS08765 abb1309e7c4d5c858ee0f78ad73391aa 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 4.2E-37 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.382 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 PIRSF PIRSF000709 3 113 4.1E-9 T 28-03-2018 DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 PIRSF PIRSF000709 168 235 0.067 T 28-03-2018 DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 138 226 9.6E-5 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 7.7E-30 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 Gene3D G3DSA:3.40.50.1240 2 250 5.1E-66 T 28-03-2018 IPR029033 Histidine phosphatase superfamily DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 SUPERFAMILY SSF53254 4 247 2.08E-76 T 28-03-2018 IPR029033 Histidine phosphatase superfamily DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 SMART SM00855 5 191 5.2E-27 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDI_RS05230 ffaf183db6859b46d90bf827d3d0e2cc 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 3.4E-127 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 Pfam PF00501 AMP-binding enzyme 126 384 3.1E-47 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 Gene3D G3DSA:3.30.300.30 378 478 7.1E-24 T 28-03-2018 DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 Gene3D G3DSA:3.40.50.980 111 140 2.2E-7 T 28-03-2018 DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 ProSitePatterns PS00455 Putative AMP-binding domain signature. 137 148 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 Gene3D G3DSA:2.30.38.10 295 377 7.7E-9 T 28-03-2018 DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 SUPERFAMILY SSF56801 22 475 8.24E-96 T 28-03-2018 DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 Pfam PF13193 AMP-binding enzyme C-terminal domain 393 465 6.8E-9 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 Gene3D G3DSA:3.30.1110.20 141 167 9.3E-8 T 28-03-2018 DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 Gene3D G3DSA:3.40.50.980 7 110 2.2E-8 T 28-03-2018 DDI_RS14980 2cefe9530c4254cb78af789a221b1ae0 478 Gene3D G3DSA:3.40.50.980 168 294 1.5E-24 T 28-03-2018 DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.3E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 SUPERFAMILY SSF53850 96 286 1.69E-28 T 28-03-2018 DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 Gene3D G3DSA:3.40.190.10 183 262 1.3E-13 T 28-03-2018 DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 SUPERFAMILY SSF46785 10 118 2.29E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 Pfam PF03466 LysR substrate binding domain 97 272 2.0E-27 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 Gene3D G3DSA:3.40.190.10 99 182 2.7E-15 T 28-03-2018 DDI_RS12725 bbbdd01bc164af1d0fe87ab34db1af33 316 Gene3D G3DSA:1.10.10.10 8 93 2.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14065 aba5be5a4979d3fc90f6d12b8f43520c 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 28-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DDI_RS14065 aba5be5a4979d3fc90f6d12b8f43520c 111 SUPERFAMILY SSF54292 4 109 4.99E-34 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS14065 aba5be5a4979d3fc90f6d12b8f43520c 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.1E-62 T 28-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 DDI_RS14065 aba5be5a4979d3fc90f6d12b8f43520c 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.8E-14 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS14065 aba5be5a4979d3fc90f6d12b8f43520c 111 PRINTS PR00355 Adrenodoxin signature 42 52 1.4E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DDI_RS14065 aba5be5a4979d3fc90f6d12b8f43520c 111 PRINTS PR00355 Adrenodoxin signature 83 91 1.4E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DDI_RS14065 aba5be5a4979d3fc90f6d12b8f43520c 111 PRINTS PR00355 Adrenodoxin signature 60 74 1.4E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DDI_RS14065 aba5be5a4979d3fc90f6d12b8f43520c 111 Gene3D G3DSA:3.10.20.30 4 111 5.2E-33 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS05275 494a958add90e5d7b955cfa0c8d7c917 261 SUPERFAMILY SSF53850 27 256 4.12E-68 T 28-03-2018 DDI_RS05275 494a958add90e5d7b955cfa0c8d7c917 261 Gene3D G3DSA:3.40.190.10 122 218 2.4E-29 T 28-03-2018 DDI_RS05275 494a958add90e5d7b955cfa0c8d7c917 261 PIRSF PIRSF004846 1 258 1.8E-78 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 DDI_RS05275 494a958add90e5d7b955cfa0c8d7c917 261 Gene3D G3DSA:3.40.190.10 24 121 3.9E-18 T 28-03-2018 DDI_RS05275 494a958add90e5d7b955cfa0c8d7c917 261 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 2.1E-45 T 28-03-2018 DDI_RS05275 494a958add90e5d7b955cfa0c8d7c917 261 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 3.8E-75 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 DDI_RS02695 e9c8f74d1dea5865ca767863bf76afb1 365 SUPERFAMILY SSF141523 175 231 8.11E-27 T 28-03-2018 DDI_RS02695 e9c8f74d1dea5865ca767863bf76afb1 365 SUPERFAMILY SSF141523 92 147 8.11E-27 T 28-03-2018 DDI_RS02695 e9c8f74d1dea5865ca767863bf76afb1 365 Pfam PF03734 L,D-transpeptidase catalytic domain 98 229 1.2E-17 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DDI_RS02695 e9c8f74d1dea5865ca767863bf76afb1 365 Gene3D G3DSA:3.10.350.10 40 87 5.3E-4 T 28-03-2018 DDI_RS02695 e9c8f74d1dea5865ca767863bf76afb1 365 Gene3D G3DSA:2.40.440.10 92 231 2.1E-28 T 28-03-2018 DDI_RS18530 8624f0acc3ba247c80bd465ee6eaab62 477 SUPERFAMILY SSF53756 1 476 3.49E-115 T 28-03-2018 DDI_RS18530 8624f0acc3ba247c80bd465ee6eaab62 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 1.6E-170 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DDI_RS18530 8624f0acc3ba247c80bd465ee6eaab62 477 Pfam PF08323 Starch synthase catalytic domain 2 233 9.9E-70 T 28-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DDI_RS18530 8624f0acc3ba247c80bd465ee6eaab62 477 Pfam PF00534 Glycosyl transferases group 1 289 438 1.9E-11 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 DDI_RS18530 8624f0acc3ba247c80bd465ee6eaab62 477 Gene3D G3DSA:3.40.50.2000 262 471 2.6E-32 T 28-03-2018 DDI_RS18530 8624f0acc3ba247c80bd465ee6eaab62 477 Gene3D G3DSA:3.40.50.2000 5 261 3.1E-13 T 28-03-2018 DDI_RS18530 8624f0acc3ba247c80bd465ee6eaab62 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.835 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DDI_RS15820 ac85ad809b363719886f170b21eeda27 379 SMART SM00729 6 223 4.6E-51 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS15820 ac85ad809b363719886f170b21eeda27 379 SUPERFAMILY SSF102114 5 376 1.11E-109 T 28-03-2018 DDI_RS15820 ac85ad809b363719886f170b21eeda27 379 Pfam PF04055 Radical SAM superfamily 11 179 4.4E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS15820 ac85ad809b363719886f170b21eeda27 379 Gene3D G3DSA:3.20.20.70 4 308 5.0E-49 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS15820 ac85ad809b363719886f170b21eeda27 379 Pfam PF06969 HemN C-terminal domain 305 364 1.2E-9 T 28-03-2018 IPR010723 HemN, C-terminal DDI_RS15820 ac85ad809b363719886f170b21eeda27 379 Gene3D G3DSA:1.10.10.10 311 376 0.0026 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15820 ac85ad809b363719886f170b21eeda27 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 6.2E-140 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 DDI_RS00085 d84d7a32215fa49646c8ce29c981bff2 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 5.6E-95 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS00085 d84d7a32215fa49646c8ce29c981bff2 483 Pfam PF00474 Sodium:solute symporter family 36 432 9.7E-118 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS00085 d84d7a32215fa49646c8ce29c981bff2 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 9.3E-217 T 28-03-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 DDI_RS05565 5cc55bc3a96c4f12df302cc468e147f0 429 Gene3D G3DSA:1.20.1250.20 5 206 2.7E-39 T 28-03-2018 DDI_RS05565 5cc55bc3a96c4f12df302cc468e147f0 429 SUPERFAMILY SSF103473 7 427 4.32E-85 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS05565 5cc55bc3a96c4f12df302cc468e147f0 429 Gene3D G3DSA:1.20.1250.20 229 428 6.3E-26 T 28-03-2018 DDI_RS05565 5cc55bc3a96c4f12df302cc468e147f0 429 PIRSF PIRSF002808 3 429 3.8E-36 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS05565 5cc55bc3a96c4f12df302cc468e147f0 429 Pfam PF07690 Major Facilitator Superfamily 20 388 1.5E-57 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS05565 5cc55bc3a96c4f12df302cc468e147f0 429 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 22 422 9.9E-139 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS04475 c5c12aaa376a564cab6aee70f36c7bfe 528 Gene3D G3DSA:3.30.450.20 27 186 1.3E-43 T 28-03-2018 DDI_RS04475 c5c12aaa376a564cab6aee70f36c7bfe 528 SMART SM00283 264 511 1.4E-79 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS04475 c5c12aaa376a564cab6aee70f36c7bfe 528 Gene3D G3DSA:1.10.287.950 320 515 4.6E-44 T 28-03-2018 DDI_RS04475 c5c12aaa376a564cab6aee70f36c7bfe 528 Gene3D G3DSA:1.10.287.950 222 319 3.6E-14 T 28-03-2018 DDI_RS04475 c5c12aaa376a564cab6aee70f36c7bfe 528 SMART SM01049 32 125 1.7E-30 T 28-03-2018 IPR033480 Single Cache domain 2 DDI_RS04475 c5c12aaa376a564cab6aee70f36c7bfe 528 Pfam PF17200 Single Cache domain 2 38 181 3.9E-40 T 28-03-2018 IPR033480 Single Cache domain 2 DDI_RS04475 c5c12aaa376a564cab6aee70f36c7bfe 528 SUPERFAMILY SSF58104 246 512 6.8E-66 T 28-03-2018 DDI_RS04475 c5c12aaa376a564cab6aee70f36c7bfe 528 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 479 1.6E-49 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09275 3570ee8bb8be7ef11371006e47d35228 152 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 32 150 1.1E-11 T 28-03-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 DDI_RS09275 3570ee8bb8be7ef11371006e47d35228 152 SUPERFAMILY SSF54427 32 147 2.34E-24 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS09275 3570ee8bb8be7ef11371006e47d35228 152 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 33 150 3.9E-14 T 28-03-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 DDI_RS09275 3570ee8bb8be7ef11371006e47d35228 152 PIRSF PIRSF028470 1 152 1.3E-57 T 28-03-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related DDI_RS09275 3570ee8bb8be7ef11371006e47d35228 152 Gene3D G3DSA:3.10.450.50 15 152 6.5E-18 T 28-03-2018 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 Gene3D G3DSA:3.40.250.10 403 481 1.2E-9 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 1.7E-136 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 SUPERFAMILY SSF52821 408 481 2.75E-10 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 Gene3D G3DSA:3.40.50.620 175 401 7.9E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 Gene3D G3DSA:3.30.70.1510 2 81 2.0E-21 T 28-03-2018 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 SUPERFAMILY SSF143437 1 173 4.01E-49 T 28-03-2018 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 228.634 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 6.9E-41 T 28-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 368 3.1E-78 T 28-03-2018 IPR020536 Thil, AANH domain GO:0004810 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 Gene3D G3DSA:3.30.2300.10 82 162 5.2E-22 T 28-03-2018 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 SUPERFAMILY SSF52402 174 372 1.39E-41 T 28-03-2018 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 Pfam PF02926 THUMP domain 28 161 8.6E-26 T 28-03-2018 IPR004114 THUMP domain GO:0003723 DDI_RS04200 2bc143c54a5b3407c3e3347c894236e2 482 SMART SM00981 75 165 2.0E-23 T 28-03-2018 IPR004114 THUMP domain GO:0003723 DDI_RS10510 f0eb3edbca2c679c76482b22418e522c 207 Gene3D G3DSA:3.40.30.10 1 98 6.0E-28 T 28-03-2018 DDI_RS10510 f0eb3edbca2c679c76482b22418e522c 207 Gene3D G3DSA:1.20.1050.10 99 201 7.6E-23 T 28-03-2018 DDI_RS10510 f0eb3edbca2c679c76482b22418e522c 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 75 1.9E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS10510 f0eb3edbca2c679c76482b22418e522c 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 196 1.3E-6 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal DDI_RS10510 f0eb3edbca2c679c76482b22418e522c 207 SUPERFAMILY SSF47616 79 200 3.2E-25 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS10510 f0eb3edbca2c679c76482b22418e522c 207 SUPERFAMILY SSF52833 1 84 5.04E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 40.752 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 683 0.0 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 SUPERFAMILY SSF81653 113 207 4.05E-21 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 Gene3D G3DSA:3.40.1110.10 326 448 3.7E-25 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 Pfam PF00122 E1-E2 ATPase 114 288 6.1E-32 T 28-03-2018 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 SUPERFAMILY SSF56784 307 570 1.7E-37 T 28-03-2018 IPR023214 HAD-like domain DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 SUPERFAMILY SSF81665 208 305 1.44E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 SUPERFAMILY SSF81665 625 668 1.44E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 SUPERFAMILY SSF81665 30 103 1.44E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 6.4E-36 T 28-03-2018 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 28-03-2018 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 28-03-2018 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 28-03-2018 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 28-03-2018 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 28-03-2018 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 Gene3D G3DSA:1.20.1110.10 62 325 4.6E-23 T 28-03-2018 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 610 4.4E-47 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 333 2.3E-33 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDI_RS05040 5ebe8c479d2118ed70a22a28f6924ff6 688 Gene3D G3DSA:3.40.50.1000 449 583 3.8E-34 T 28-03-2018 IPR023214 HAD-like domain DDI_RS00730 24338db072888582d909caafbb739f1e 167 SUPERFAMILY SSF55729 10 167 2.23E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS00730 24338db072888582d909caafbb739f1e 167 Gene3D G3DSA:3.40.630.30 1 165 2.3E-29 T 28-03-2018 DDI_RS00730 24338db072888582d909caafbb739f1e 167 Pfam PF00583 Acetyltransferase (GNAT) family 41 144 4.4E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS06135 a459cb61c44590dae9850524182e7c8e 618 Pfam PF06276 Ferric iron reductase FhuF-like transporter 429 601 1.1E-37 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain DDI_RS06135 a459cb61c44590dae9850524182e7c8e 618 Pfam PF04183 IucA / IucC family 158 404 1.0E-73 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 DDI_RS12520 7a02f5a919a0e49243421c6942e654c3 381 Gene3D G3DSA:2.40.50.100 165 365 1.2E-6 T 28-03-2018 DDI_RS12520 7a02f5a919a0e49243421c6942e654c3 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 281 1.5E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS12520 7a02f5a919a0e49243421c6942e654c3 381 Gene3D G3DSA:2.40.50.100 51 107 2.6E-9 T 28-03-2018 DDI_RS12520 7a02f5a919a0e49243421c6942e654c3 381 SUPERFAMILY SSF111369 46 286 2.22E-77 T 28-03-2018 DDI_RS12520 7a02f5a919a0e49243421c6942e654c3 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 363 4.1E-80 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS12520 7a02f5a919a0e49243421c6942e654c3 381 Gene3D G3DSA:1.10.287.470 108 164 5.5E-9 T 28-03-2018 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 PIRSF PIRSF002162 1 177 1.6E-44 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 SUPERFAMILY SSF56053 83 177 6.41E-36 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 Pfam PF00347 Ribosomal protein L6 90 164 1.0E-18 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 Pfam PF00347 Ribosomal protein L6 11 82 5.8E-18 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 Gene3D G3DSA:3.90.930.12 86 177 3.2E-39 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.081 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.2E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.2E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.2E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.5E-72 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 Gene3D G3DSA:3.90.930.12 5 85 4.5E-24 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18020 e34a80f2b038e31b39db80e39c863ebe 177 SUPERFAMILY SSF56053 1 82 2.36E-22 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS00335 97036b39d77701e355d1945d4a810dee 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 7.8E-11 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal DDI_RS00335 97036b39d77701e355d1945d4a810dee 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 4.0E-19 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS00335 97036b39d77701e355d1945d4a810dee 213 Gene3D G3DSA:3.40.30.10 1 88 3.0E-25 T 28-03-2018 DDI_RS00335 97036b39d77701e355d1945d4a810dee 213 SUPERFAMILY SSF52833 7 90 3.02E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS00335 97036b39d77701e355d1945d4a810dee 213 Gene3D G3DSA:1.20.1050.10 89 209 1.6E-16 T 28-03-2018 DDI_RS00335 97036b39d77701e355d1945d4a810dee 213 SUPERFAMILY SSF47616 82 208 5.4E-26 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 Gene3D G3DSA:1.10.287.950 328 521 2.7E-45 T 28-03-2018 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 Gene3D G3DSA:1.20.120.30 24 189 2.3E-27 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 SMART SM00283 270 517 4.7E-83 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 484 8.5E-50 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 Pfam PF02203 Tar ligand binding domain homologue 3 170 1.4E-19 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 SUPERFAMILY SSF47170 27 181 4.45E-8 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 SUPERFAMILY SSF58104 237 518 1.16E-68 T 28-03-2018 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 SMART SM00304 217 269 8.9E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 Pfam PF00672 HAMP domain 219 264 4.0E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 Gene3D G3DSA:1.10.287.1060 226 327 0.26 T 28-03-2018 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 2.3E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 2.3E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 2.3E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 2.3E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15775 68c31c21ad5dd308a19620eed131d3c3 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 2.3E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS17605 2c7b828ec165041cd3ab77de0884ad81 72 Gene3D G3DSA:2.40.50.240 1 69 2.6E-19 T 28-03-2018 IPR024044 NifT/FixU barrel-like domain DDI_RS17605 2c7b828ec165041cd3ab77de0884ad81 72 Pfam PF06988 NifT/FixU protein 1 66 3.7E-19 T 28-03-2018 IPR009727 NifT/FixU GO:0009399 DDI_RS17605 2c7b828ec165041cd3ab77de0884ad81 72 SUPERFAMILY SSF159203 3 68 1.96E-18 T 28-03-2018 IPR024044 NifT/FixU barrel-like domain DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.0E-146 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 SUPERFAMILY SSF46785 260 331 2.29E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 5.9E-34 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 Gene3D G3DSA:1.10.10.10 260 330 1.1E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 5.0E-40 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 SUPERFAMILY SSF52540 23 254 4.27E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 SMART SM00382 54 181 5.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 1.3E-116 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 184.565 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 Gene3D G3DSA:1.10.8.60 187 257 4.1E-30 T 28-03-2018 DDI_RS08695 e6a09700bd0b1a55fd473b1b67b18da0 334 Gene3D G3DSA:3.40.50.300 21 184 3.3E-26 T 28-03-2018 DDI_RS09145 c51b1ad2fda5f27062e9f48dda429840 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 3.2E-73 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 DDI_RS09145 c51b1ad2fda5f27062e9f48dda429840 206 Pfam PF01300 Telomere recombination 22 198 3.8E-45 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 DDI_RS09145 c51b1ad2fda5f27062e9f48dda429840 206 Gene3D G3DSA:3.90.870.10 1 205 4.1E-59 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain DDI_RS09145 c51b1ad2fda5f27062e9f48dda429840 206 SUPERFAMILY SSF55821 1 204 3.66E-65 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain DDI_RS16720 21349c01f286530b46265dfee91b461e 486 Pfam PF01225 Mur ligase family, catalytic domain 21 118 2.8E-28 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 Gene3D G3DSA:3.40.1190.10 108 324 1.3E-53 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 3.1E-21 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 SUPERFAMILY SSF51984 20 106 4.45E-28 T 28-03-2018 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 Gene3D G3DSA:3.90.190.20 325 481 1.5E-37 T 28-03-2018 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 Gene3D G3DSA:3.40.50.720 1 107 2.8E-17 T 28-03-2018 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 Pfam PF08245 Mur ligase middle domain 124 304 5.3E-26 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 SUPERFAMILY SSF53623 105 322 1.96E-74 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.482 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 SUPERFAMILY SSF53244 323 476 2.38E-47 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS16720 21349c01f286530b46265dfee91b461e 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 5.3E-181 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 SUPERFAMILY SSF46689 182 232 7.26E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 Gene3D G3DSA:1.10.10.60 176 236 8.1E-11 T 28-03-2018 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 Gene3D G3DSA:1.10.10.60 237 295 1.1E-12 T 28-03-2018 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 SUPERFAMILY SSF46689 236 286 2.87E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 Gene3D G3DSA:2.60.120.280 12 172 6.3E-24 T 28-03-2018 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 Pfam PF12833 Helix-turn-helix domain 205 284 9.1E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 SUPERFAMILY SSF51215 12 171 3.14E-34 T 28-03-2018 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 SMART SM00342 199 282 1.2E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 Pfam PF02311 AraC-like ligand binding domain 27 162 1.4E-22 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 9.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS09260 400d951cc613e1bedd2e532544416856 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 9.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS04180 b7d7b5e188392f85b8c74840784d652b 170 Gene3D G3DSA:1.10.3760.10 60 170 9.1E-39 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DDI_RS04180 b7d7b5e188392f85b8c74840784d652b 170 SUPERFAMILY SSF101307 18 166 3.79E-47 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DDI_RS04180 b7d7b5e188392f85b8c74840784d652b 170 Pfam PF04608 Phosphatidylglycerophosphatase A 25 164 6.0E-53 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DDI_RS04180 b7d7b5e188392f85b8c74840784d652b 170 PIRSF PIRSF006162 14 170 2.4E-59 T 28-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 Gene3D G3DSA:1.20.1260.10 2 153 1.1E-38 T 28-03-2018 IPR012347 Ferritin-related DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.6E-81 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 PRINTS PR00601 Bacterioferritin signature 107 127 2.4E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 PRINTS PR00601 Bacterioferritin signature 65 85 2.4E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 PRINTS PR00601 Bacterioferritin signature 86 106 2.4E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 PRINTS PR00601 Bacterioferritin signature 128 149 2.4E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 PRINTS PR00601 Bacterioferritin signature 3 22 2.4E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 PRINTS PR00601 Bacterioferritin signature 23 43 2.4E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 PRINTS PR00601 Bacterioferritin signature 44 64 2.4E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 PIRSF PIRSF002560 1 157 2.0E-71 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 Pfam PF00210 Ferritin-like domain 9 143 2.5E-39 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DDI_RS18105 fe3311bc07cbdf8a66eda6dfce2d0274 157 SUPERFAMILY SSF47240 1 154 1.8E-53 T 28-03-2018 IPR009078 Ferritin-like superfamily DDI_RS10990 359364c8721338be9954aeacd91b34c2 299 SMART SM00530 28 100 0.0081 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS10990 359364c8721338be9954aeacd91b34c2 299 Gene3D G3DSA:1.10.260.40 14 104 2.1E-11 T 28-03-2018 DDI_RS10990 359364c8721338be9954aeacd91b34c2 299 SUPERFAMILY SSF47413 36 96 2.53E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS10990 359364c8721338be9954aeacd91b34c2 299 Pfam PF13560 Helix-turn-helix domain 24 103 1.8E-14 T 28-03-2018 DDI_RS13520 fda6d4f6018db70f73358bb4c0f30f2c 509 PIRSF PIRSF001267 4 507 5.1E-201 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 DDI_RS13520 fda6d4f6018db70f73358bb4c0f30f2c 509 Gene3D G3DSA:3.30.420.40 3 126 8.5E-39 T 28-03-2018 DDI_RS13520 fda6d4f6018db70f73358bb4c0f30f2c 509 SUPERFAMILY SSF53067 14 134 3.76E-36 T 28-03-2018 DDI_RS13520 fda6d4f6018db70f73358bb4c0f30f2c 509 Pfam PF02541 Ppx/GppA phosphatase family 27 309 8.5E-96 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DDI_RS13520 fda6d4f6018db70f73358bb4c0f30f2c 509 Gene3D G3DSA:3.30.420.150 127 306 1.0E-33 T 28-03-2018 DDI_RS13520 fda6d4f6018db70f73358bb4c0f30f2c 509 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 14 307 9.1E-99 T 28-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 DDI_RS13520 fda6d4f6018db70f73358bb4c0f30f2c 509 SUPERFAMILY SSF109604 314 506 1.41E-50 T 28-03-2018 DDI_RS13520 fda6d4f6018db70f73358bb4c0f30f2c 509 SUPERFAMILY SSF53067 138 311 8.42E-46 T 28-03-2018 DDI_RS01620 1f698573c88453bc907a95daa44968c3 132 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 17 127 9.0E-19 T 28-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 SUPERFAMILY SSF50621 276 431 3.77E-37 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 85 97 1.9E-12 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 65 83 1.9E-12 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 284 303 1.9E-12 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 197 210 1.9E-12 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 294 6.4E-48 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 Gene3D G3DSA:3.20.20.10 43 285 2.3E-57 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 38 388 3.9E-13 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 Gene3D G3DSA:2.40.37.10 286 437 2.2E-34 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS20835 1049015c8202a30cda09d6ec408238b9 441 SUPERFAMILY SSF51419 35 296 2.76E-68 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS13140 3409de0d0327a814af2ec97aa91843be 125 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 104 2.2E-27 T 28-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 DDI_RS13140 3409de0d0327a814af2ec97aa91843be 125 Pfam PF02501 Type II secretion system (T2SS), protein I 39 116 5.0E-23 T 28-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 DDI_RS13140 3409de0d0327a814af2ec97aa91843be 125 SUPERFAMILY SSF54523 36 117 1.88E-24 T 28-03-2018 DDI_RS13140 3409de0d0327a814af2ec97aa91843be 125 Gene3D G3DSA:3.30.1300.30 32 117 2.7E-23 T 28-03-2018 DDI_RS13140 3409de0d0327a814af2ec97aa91843be 125 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.0E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13140 3409de0d0327a814af2ec97aa91843be 125 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 2.0E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13140 3409de0d0327a814af2ec97aa91843be 125 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13345 fecda119f4bb65c32044d7bbaa280ace 260 Pfam PF00005 ABC transporter 24 183 1.8E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS13345 fecda119f4bb65c32044d7bbaa280ace 260 SUPERFAMILY SSF52540 10 253 1.69E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13345 fecda119f4bb65c32044d7bbaa280ace 260 Gene3D G3DSA:3.40.50.300 5 259 4.0E-65 T 28-03-2018 DDI_RS13345 fecda119f4bb65c32044d7bbaa280ace 260 PIRSF PIRSF039085 5 259 8.8E-111 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS13345 fecda119f4bb65c32044d7bbaa280ace 260 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS13345 fecda119f4bb65c32044d7bbaa280ace 260 SMART SM00382 33 231 2.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS12970 827d7504a4a0ec75949910385644f194 730 SUPERFAMILY SSF52096 25 312 1.17E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS12970 827d7504a4a0ec75949910385644f194 730 Gene3D G3DSA:1.10.1040.10 503 602 4.7E-26 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 SUPERFAMILY SSF48179 634 724 4.51E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 323 501 6.5E-55 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 501 526 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 Gene3D G3DSA:3.40.50.720 265 502 1.7E-53 T 28-03-2018 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 Gene3D G3DSA:1.10.1040.10 635 722 1.9E-16 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 216 1.3E-42 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 SUPERFAMILY SSF48179 504 603 1.79E-29 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 18 723 0.0 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 504 597 2.7E-24 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 637 711 1.3E-4 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 Gene3D G3DSA:3.90.226.10 2 217 4.8E-58 T 28-03-2018 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 117 137 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 DDI_RS12970 827d7504a4a0ec75949910385644f194 730 SUPERFAMILY SSF51735 320 501 4.13E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS14750 2af49664ddb43a53a50fd49d3d064d4f 182 Gene3D G3DSA:2.30.30.240 102 177 1.5E-22 T 28-03-2018 DDI_RS14750 2af49664ddb43a53a50fd49d3d064d4f 182 Pfam PF01782 RimM N-terminal domain 16 95 2.1E-25 T 28-03-2018 IPR002676 RimM protein GO:0006364 DDI_RS14750 2af49664ddb43a53a50fd49d3d064d4f 182 SUPERFAMILY SSF50346 106 182 5.69E-20 T 28-03-2018 IPR011033 PRC-barrel-like DDI_RS14750 2af49664ddb43a53a50fd49d3d064d4f 182 Pfam PF05239 PRC-barrel domain 104 177 1.4E-8 T 28-03-2018 IPR027275 PRC-barrel domain DDI_RS14750 2af49664ddb43a53a50fd49d3d064d4f 182 SUPERFAMILY SSF50447 13 100 8.47E-25 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS14750 2af49664ddb43a53a50fd49d3d064d4f 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 2.5E-58 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DDI_RS14750 2af49664ddb43a53a50fd49d3d064d4f 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.488 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DDI_RS14750 2af49664ddb43a53a50fd49d3d064d4f 182 Gene3D G3DSA:2.40.30.60 12 100 5.8E-27 T 28-03-2018 IPR002676 RimM protein GO:0006364 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 Gene3D G3DSA:3.40.1190.10 100 336 5.9E-56 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 SUPERFAMILY SSF63418 1 98 2.62E-23 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 485 34.579 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 Pfam PF08245 Mur ligase middle domain 109 312 1.5E-53 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 Gene3D G3DSA:3.40.1390.10 1 99 4.2E-24 T 28-03-2018 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 SUPERFAMILY SSF53623 100 331 2.09E-77 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 1.6E-24 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 Gene3D G3DSA:3.90.190.20 337 487 2.7E-47 T 28-03-2018 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 SUPERFAMILY SSF53244 333 485 1.22E-49 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 Pfam PF01225 Mur ligase family, catalytic domain 20 97 8.5E-13 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDI_RS16750 55aa077eb079bfec7ea339454a0b8dfc 489 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 16 485 3.0E-167 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Gene3D G3DSA:2.40.50.150 814 949 8.3E-29 T 28-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.325 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Gene3D G3DSA:3.90.1800.10 1267 1311 7.4E-12 T 28-03-2018 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.7E-56 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 1.0E-159 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 341 454 1.7E-14 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 240 3.0E-8 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Gene3D G3DSA:2.40.50.100 715 795 1.6E-27 T 28-03-2018 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Gene3D G3DSA:3.90.1100.10 19 645 6.3E-116 T 28-03-2018 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Gene3D G3DSA:3.90.1100.10 646 713 2.2E-14 T 28-03-2018 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 SUPERFAMILY SSF64484 343 939 0.0 T 28-03-2018 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 SUPERFAMILY SSF64484 1039 1340 0.0 T 28-03-2018 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 SUPERFAMILY SSF64484 12 226 0.0 T 28-03-2018 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Gene3D G3DSA:2.40.270.10 1025 1242 1.0E-80 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.4E-27 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS21460 61eaabd88862c3da8e32d1226df8569d 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 2.6E-27 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS13395 22e17eb2a5100ed55a0afd0af565f40d 387 SMART SM00922 161 258 7.6E-15 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS13395 22e17eb2a5100ed55a0afd0af565f40d 387 SUPERFAMILY SSF54826 1 137 1.61E-25 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS13395 22e17eb2a5100ed55a0afd0af565f40d 387 Gene3D G3DSA:3.20.20.120 116 370 2.5E-42 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS13395 22e17eb2a5100ed55a0afd0af565f40d 387 Pfam PF13378 Enolase C-terminal domain-like 164 375 1.2E-35 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS13395 22e17eb2a5100ed55a0afd0af565f40d 387 SUPERFAMILY SSF51604 123 383 2.57E-51 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS13395 22e17eb2a5100ed55a0afd0af565f40d 387 Gene3D G3DSA:3.30.390.10 1 115 1.6E-63 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS19365 f5b3505f64567961d2139d4329f28b4e 222 Gene3D G3DSA:3.40.50.300 1 220 1.8E-62 T 28-03-2018 DDI_RS19365 f5b3505f64567961d2139d4329f28b4e 222 Pfam PF00005 ABC transporter 18 165 1.8E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19365 f5b3505f64567961d2139d4329f28b4e 222 SUPERFAMILY SSF52540 1 216 4.46E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19365 f5b3505f64567961d2139d4329f28b4e 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 2.9E-93 T 28-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 DDI_RS19365 f5b3505f64567961d2139d4329f28b4e 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS19365 f5b3505f64567961d2139d4329f28b4e 222 SMART SM00382 27 214 7.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04210 68f75903c5a80659cf2f9c8fb9a7d869 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 5.6E-26 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 DDI_RS04210 68f75903c5a80659cf2f9c8fb9a7d869 306 SUPERFAMILY SSF48179 172 292 6.8E-36 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS04210 68f75903c5a80659cf2f9c8fb9a7d869 306 Gene3D G3DSA:1.10.1040.10 171 300 2.9E-34 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS04210 68f75903c5a80659cf2f9c8fb9a7d869 306 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 294 6.1E-79 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 DDI_RS04210 68f75903c5a80659cf2f9c8fb9a7d869 306 Gene3D G3DSA:3.40.50.720 1 170 3.3E-25 T 28-03-2018 DDI_RS04210 68f75903c5a80659cf2f9c8fb9a7d869 306 SUPERFAMILY SSF51735 1 170 8.74E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS04210 68f75903c5a80659cf2f9c8fb9a7d869 306 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 172 292 2.4E-33 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 DDI_RS07215 612db695883960414127a6f72c86aa57 402 SUPERFAMILY SSF56024 186 360 8.07E-37 T 28-03-2018 DDI_RS07215 612db695883960414127a6f72c86aa57 402 SMART SM00155 287 314 52.0 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DDI_RS07215 612db695883960414127a6f72c86aa57 402 SMART SM00155 109 136 3.5E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DDI_RS07215 612db695883960414127a6f72c86aa57 402 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 385 51.306 T 28-03-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 DDI_RS07215 612db695883960414127a6f72c86aa57 402 Gene3D G3DSA:3.30.870.10 200 366 4.0E-27 T 28-03-2018 DDI_RS07215 612db695883960414127a6f72c86aa57 402 Gene3D G3DSA:3.30.870.10 1 199 1.8E-29 T 28-03-2018 DDI_RS07215 612db695883960414127a6f72c86aa57 402 PIRSF PIRSF000850 148 263 0.86 T 28-03-2018 DDI_RS07215 612db695883960414127a6f72c86aa57 402 PIRSF PIRSF000850 278 355 0.19 T 28-03-2018 DDI_RS07215 612db695883960414127a6f72c86aa57 402 PIRSF PIRSF000850 4 69 0.021 T 28-03-2018 DDI_RS07215 612db695883960414127a6f72c86aa57 402 Pfam PF13091 PLD-like domain 26 137 2.7E-9 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DDI_RS07215 612db695883960414127a6f72c86aa57 402 Pfam PF13091 PLD-like domain 215 341 1.9E-25 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DDI_RS07215 612db695883960414127a6f72c86aa57 402 SUPERFAMILY SSF56024 5 178 5.34E-38 T 28-03-2018 DDI_RS15790 ade53575da158c59b26e79e5baeb9695 342 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 332 1.3E-135 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 DDI_RS15790 ade53575da158c59b26e79e5baeb9695 342 Pfam PF00437 Type II/IV secretion system protein 123 268 5.9E-39 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS15790 ade53575da158c59b26e79e5baeb9695 342 Gene3D G3DSA:3.30.450.90 1 101 7.1E-20 T 28-03-2018 DDI_RS15790 ade53575da158c59b26e79e5baeb9695 342 Gene3D G3DSA:3.40.50.300 121 273 2.6E-27 T 28-03-2018 DDI_RS15790 ade53575da158c59b26e79e5baeb9695 342 Gene3D G3DSA:3.40.50.300 274 337 5.0E-8 T 28-03-2018 DDI_RS15790 ade53575da158c59b26e79e5baeb9695 342 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 194 208 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS15790 ade53575da158c59b26e79e5baeb9695 342 SMART SM00382 123 248 0.0011 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS15790 ade53575da158c59b26e79e5baeb9695 342 SUPERFAMILY SSF52540 6 329 4.75E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 Gene3D G3DSA:3.20.70.20 123 739 1.9E-145 T 28-03-2018 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 SUPERFAMILY SSF51998 222 740 2.17E-168 T 28-03-2018 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 4.4E-12 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.1E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.1E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.1E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.1E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.1E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.1E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 Pfam PF03477 ATP cone domain 6 92 2.2E-16 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 SUPERFAMILY SSF48168 10 221 3.4E-73 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.5E-117 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.3E-178 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04525 98aefa5d53ced2a5240d5ea89e29fb25 762 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS06200 a20167df1587875af5de4bdb24f90eff 122 Pfam PF01381 Helix-turn-helix 67 118 2.5E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS06200 a20167df1587875af5de4bdb24f90eff 122 SMART SM00530 65 120 3.3E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS06200 a20167df1587875af5de4bdb24f90eff 122 Gene3D G3DSA:3.30.1190.10 87 121 1.0E-11 T 28-03-2018 DDI_RS06200 a20167df1587875af5de4bdb24f90eff 122 Gene3D G3DSA:1.10.10.60 60 86 2.4E-8 T 28-03-2018 DDI_RS06200 a20167df1587875af5de4bdb24f90eff 122 SUPERFAMILY SSF47413 64 120 8.58E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 SUPERFAMILY SSF51735 240 272 4.27E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 SUPERFAMILY SSF51735 5 130 4.27E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 9.6E-43 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.725 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 1.8E-108 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 SUPERFAMILY SSF55347 131 240 7.85E-38 T 28-03-2018 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 Gene3D G3DSA:3.40.50.720 4 144 9.5E-28 T 28-03-2018 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 Gene3D G3DSA:3.30.360.10 145 238 4.2E-36 T 28-03-2018 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.0E-41 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS16990 b8fad9889d1b2591ef784ab468659229 273 PIRSF PIRSF000161 4 272 2.4E-89 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 SUPERFAMILY SSF55729 729 868 7.03E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 SMART SM00881 9 104 1.2E-25 T 28-03-2018 IPR003781 CoA-binding GO:0048037 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 SUPERFAMILY SSF51735 2 136 5.79E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Gene3D G3DSA:3.40.50.720 9 126 1.8E-30 T 28-03-2018 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Gene3D G3DSA:3.40.630.30 717 888 4.0E-22 T 28-03-2018 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Gene3D G3DSA:3.30.470.20 563 699 1.5E-22 T 28-03-2018 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 SUPERFAMILY SSF52210 288 448 3.4E-37 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 SUPERFAMILY SSF56059 482 688 1.09E-26 T 28-03-2018 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Gene3D G3DSA:3.40.50.261 286 453 2.9E-34 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Gene3D G3DSA:3.40.50.261 127 285 1.1E-38 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 SUPERFAMILY SSF52210 125 287 5.89E-36 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 281 5.8E-46 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Pfam PF13549 ATP-grasp domain 473 694 3.9E-72 T 28-03-2018 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Pfam PF13380 CoA binding domain 13 129 6.6E-23 T 28-03-2018 IPR003781 CoA-binding GO:0048037 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Gene3D G3DSA:3.30.1490.20 501 562 2.0E-24 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS15300 057fbd1a54c774f1c3cca098a849181c 888 Pfam PF00583 Acetyltransferase (GNAT) family 761 865 2.6E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS14830 63dd7d4cfeefa8556ad772e691614889 162 SUPERFAMILY SSF142433 4 160 3.53E-57 T 28-03-2018 IPR008136 CinA, C-terminal DDI_RS14830 63dd7d4cfeefa8556ad772e691614889 162 Gene3D G3DSA:3.90.950.20 1 161 3.8E-60 T 28-03-2018 DDI_RS14830 63dd7d4cfeefa8556ad772e691614889 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 160 4.5E-58 T 28-03-2018 IPR008136 CinA, C-terminal DDI_RS14830 63dd7d4cfeefa8556ad772e691614889 162 Pfam PF02464 Competence-damaged protein 9 159 4.9E-60 T 28-03-2018 IPR008136 CinA, C-terminal DDI_RS04265 d42922edb1fa5d86941b8dbe61c7d258 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 3.2E-53 T 28-03-2018 IPR005619 Uncharacterised protein family, YajG DDI_RS05080 010ed21144f9c626d69589eae33fc6fe 309 SMART SM00797 23 298 2.5E-142 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS05080 010ed21144f9c626d69589eae33fc6fe 309 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 280 8.0E-93 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS05080 010ed21144f9c626d69589eae33fc6fe 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 307 3.2E-116 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS05080 010ed21144f9c626d69589eae33fc6fe 309 SUPERFAMILY SSF50891 173 287 7.21E-11 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 SUPERFAMILY SSF55124 346 422 4.58E-22 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 SUPERFAMILY SSF56014 429 561 1.44E-34 T 28-03-2018 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 Gene3D G3DSA:3.30.413.10 141 345 1.6E-44 T 28-03-2018 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 Gene3D G3DSA:3.30.413.10 426 562 8.7E-25 T 28-03-2018 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 SUPERFAMILY SSF56014 150 344 2.49E-58 T 28-03-2018 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 571 58.52 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 SUPERFAMILY SSF55124 14 142 8.18E-25 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 559 8.3E-294 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 1.1E-13 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 140 1.7E-12 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 431 558 0.056 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 1.8E-46 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 7.9E-9 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 7.9E-9 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS15455 b90df3017bb95a95cb0b6e3dec2c9c81 571 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 478 494 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.884 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 Gene3D G3DSA:3.40.50.980 267 429 2.1E-35 T 28-03-2018 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 Pfam PF00501 AMP-binding enzyme 84 522 4.4E-91 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 6.8E-26 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 Gene3D G3DSA:3.40.50.980 74 266 1.7E-53 T 28-03-2018 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 SUPERFAMILY SSF56801 10 643 7.72E-187 T 28-03-2018 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 Gene3D G3DSA:2.30.38.10 430 515 3.8E-11 T 28-03-2018 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 Gene3D G3DSA:3.30.300.30 518 649 3.2E-27 T 28-03-2018 DDI_RS02600 8b07331600c00474866b062f76bff4b0 653 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.6E-21 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DDI_RS21060 680b54b4e0466bbe5037d422d0479782 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 223 2.5E-12 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS21060 680b54b4e0466bbe5037d422d0479782 238 Gene3D G3DSA:3.30.230.70 1 238 7.6E-61 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS21060 680b54b4e0466bbe5037d422d0479782 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 28-03-2018 IPR018336 Ribonuclease PH, conserved site DDI_RS21060 680b54b4e0466bbe5037d422d0479782 238 SUPERFAMILY SSF55666 153 237 7.85E-27 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS21060 680b54b4e0466bbe5037d422d0479782 238 SUPERFAMILY SSF54211 1 181 6.07E-45 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS21060 680b54b4e0466bbe5037d422d0479782 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.9E-24 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDI_RS21060 680b54b4e0466bbe5037d422d0479782 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.2E-114 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DDI_RS21060 680b54b4e0466bbe5037d422d0479782 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.509 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 Pfam PF13505 Outer membrane protein beta-barrel domain 9 170 4.5E-24 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 SUPERFAMILY SSF56925 27 170 9.94E-31 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 Gene3D G3DSA:2.40.160.20 22 170 6.3E-23 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 158 169 2.2E-36 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 2.2E-36 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 131 152 2.2E-36 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 83 106 2.2E-36 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 DDI_RS07385 1817748b7c30f9cae831e79781228f4e 170 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 162 170 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 DDI_RS09790 2ff0d541307c20e0dc724c4e6c2268a5 270 Pfam PF13614 AAA domain 3 160 1.9E-21 T 28-03-2018 IPR025669 AAA domain DDI_RS09790 2ff0d541307c20e0dc724c4e6c2268a5 270 Gene3D G3DSA:3.40.50.300 1 260 2.7E-57 T 28-03-2018 DDI_RS09790 2ff0d541307c20e0dc724c4e6c2268a5 270 PIRSF PIRSF003092 1 270 3.8E-100 T 28-03-2018 IPR025501 ATP binding protein MinD DDI_RS09790 2ff0d541307c20e0dc724c4e6c2268a5 270 SUPERFAMILY SSF52540 1 269 2.26E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09790 2ff0d541307c20e0dc724c4e6c2268a5 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 2.0E-110 T 28-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 SMART SM00100 2 122 1.0E-26 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 Gene3D G3DSA:2.60.120.10 4 144 4.8E-34 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 Gene3D G3DSA:1.10.10.10 145 210 9.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 SUPERFAMILY SSF51206 8 136 1.14E-35 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 4.3E-24 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site DDI_RS18270 2c3902a4fdbe9e65d7da0503c23f80b0 210 SMART SM00419 160 208 4.5E-17 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDI_RS17010 3e992d57cb392d99c3839a68c966229d 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 8.4E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 DDI_RS17010 3e992d57cb392d99c3839a68c966229d 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 8.4E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 DDI_RS17010 3e992d57cb392d99c3839a68c966229d 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 8.4E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 DDI_RS17010 3e992d57cb392d99c3839a68c966229d 168 Pfam PF01252 Signal peptidase (SPase) II 16 155 3.3E-39 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 DDI_RS17010 3e992d57cb392d99c3839a68c966229d 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.702 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 DDI_RS17010 3e992d57cb392d99c3839a68c966229d 168 TIGRFAM TIGR00077 lspA: signal peptidase II 2 164 5.8E-52 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 Gene3D G3DSA:3.40.228.10 142 393 2.6E-48 T 28-03-2018 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 SUPERFAMILY SSF50692 578 750 6.78E-34 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 Pfam PF01568 Molydopterin dinucleotide binding domain 625 746 2.1E-28 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 SUPERFAMILY SSF53706 11 608 4.32E-148 T 28-03-2018 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 Gene3D G3DSA:2.40.40.20 607 752 6.1E-32 T 28-03-2018 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 Gene3D G3DSA:3.90.55.10 4 89 6.4E-15 T 28-03-2018 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 Gene3D G3DSA:3.90.55.10 473 546 2.5E-22 T 28-03-2018 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 Gene3D G3DSA:3.40.228.10 547 606 8.9E-8 T 28-03-2018 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 Gene3D G3DSA:3.40.228.10 394 467 0.06 T 28-03-2018 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 664 691 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 452 469 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DDI_RS03250 21f3318e33b97da6ac6da49db617668f 753 Pfam PF00384 Molybdopterin oxidoreductase 52 507 4.1E-61 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS20900 56f1bb74b070a1b5346b5641ffc2df0e 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 5.8E-43 T 28-03-2018 IPR013527 YicC-like, N-terminal DDI_RS20900 56f1bb74b070a1b5346b5641ffc2df0e 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.3E-34 T 28-03-2018 IPR013551 Domain of unknown function DUF1732 DDI_RS20900 56f1bb74b070a1b5346b5641ffc2df0e 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 6.4E-130 T 28-03-2018 IPR005229 Conserved hypothetical protein CHP00255 DDI_RS04805 c16dbd650b474a23a4b1611a05172b50 230 PIRSF PIRSF016262 1 214 7.9E-57 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDI_RS04805 c16dbd650b474a23a4b1611a05172b50 230 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 36.887 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDI_RS04805 c16dbd650b474a23a4b1611a05172b50 230 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 28-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DDI_RS04805 c16dbd650b474a23a4b1611a05172b50 230 Gene3D G3DSA:3.30.930.10 2 204 3.0E-59 T 28-03-2018 DDI_RS04805 c16dbd650b474a23a4b1611a05172b50 230 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-21 T 28-03-2018 DDI_RS04805 c16dbd650b474a23a4b1611a05172b50 230 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 203 1.6E-73 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDI_RS04805 c16dbd650b474a23a4b1611a05172b50 230 SUPERFAMILY SSF55681 5 205 2.65E-67 T 28-03-2018 DDI_RS04805 c16dbd650b474a23a4b1611a05172b50 230 Pfam PF03099 Biotin/lipoate A/B protein ligase family 63 154 3.6E-5 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 DDI_RS02895 a65a73b6c32b578901807e10e23c3816 330 SUPERFAMILY SSF52540 3 194 8.01E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02895 a65a73b6c32b578901807e10e23c3816 330 Gene3D G3DSA:3.40.50.300 2 330 3.7E-36 T 28-03-2018 DDI_RS02895 a65a73b6c32b578901807e10e23c3816 330 Pfam PF13614 AAA domain 2 198 8.5E-29 T 28-03-2018 IPR025669 AAA domain DDI_RS21065 c89a6208bc6fa5fd946d8e870b52e4b9 213 Gene3D G3DSA:3.40.50.2020 1 193 2.4E-48 T 28-03-2018 DDI_RS21065 c89a6208bc6fa5fd946d8e870b52e4b9 213 Pfam PF00156 Phosphoribosyl transferase domain 50 161 2.4E-12 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDI_RS21065 c89a6208bc6fa5fd946d8e870b52e4b9 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.372 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS21065 c89a6208bc6fa5fd946d8e870b52e4b9 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.1E-68 T 28-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS21065 c89a6208bc6fa5fd946d8e870b52e4b9 213 SUPERFAMILY SSF53271 2 199 1.19E-47 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS15605 660a6e5b042826345ef6920fb41c5064 443 SMART SM01118 2 207 2.6E-36 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DDI_RS15605 660a6e5b042826345ef6920fb41c5064 443 Gene3D G3DSA:2.40.320.10 2 214 2.5E-43 T 28-03-2018 DDI_RS15605 660a6e5b042826345ef6920fb41c5064 443 SUPERFAMILY SSF55154 1 223 1.96E-49 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 DDI_RS15605 660a6e5b042826345ef6920fb41c5064 443 Pfam PF01928 CYTH domain 4 201 5.5E-26 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 46.063 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 Pfam PF00551 Formyl transferase 88 264 2.0E-52 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 Gene3D G3DSA:3.30.70.260 5 85 7.7E-11 T 28-03-2018 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 Gene3D G3DSA:3.40.50.170 86 279 1.1E-51 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 PIRSF PIRSF036480 6 283 1.2E-112 T 28-03-2018 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 SUPERFAMILY SSF53328 88 282 1.57E-59 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 Pfam PF01842 ACT domain 10 70 7.6E-7 T 28-03-2018 IPR002912 ACT domain DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 SUPERFAMILY SSF55021 8 58 3.71E-8 T 28-03-2018 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 282 2.9E-129 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 6.7E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 6.7E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 6.7E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 6.7E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 6.7E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS08975 7be9370d6539d7a76fa9af81286b8786 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 6.7E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 DDI_RS11850 ab0ef9d09b418bfd5432d6c0468fa81d 500 SUPERFAMILY SSF74650 12 383 1.38E-161 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS11850 ab0ef9d09b418bfd5432d6c0468fa81d 500 Gene3D G3DSA:2.70.98.10 12 381 4.5E-164 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDI_RS11850 ab0ef9d09b418bfd5432d6c0468fa81d 500 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 2 498 60.929 T 28-03-2018 IPR023704 Glucan biosynthesis protein G DDI_RS11850 ab0ef9d09b418bfd5432d6c0468fa81d 500 Gene3D G3DSA:2.60.40.10 387 500 5.1E-42 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS11850 ab0ef9d09b418bfd5432d6c0468fa81d 500 SUPERFAMILY SSF81296 388 499 1.82E-32 T 28-03-2018 IPR014756 Immunoglobulin E-set DDI_RS11850 ab0ef9d09b418bfd5432d6c0468fa81d 500 PIRSF PIRSF006281 2 500 2.8E-233 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D DDI_RS11850 ab0ef9d09b418bfd5432d6c0468fa81d 500 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 12 496 5.5E-194 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 PIRSF PIRSF000077 36 141 1.8E-30 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 ProSitePatterns PS00194 Thioredoxin family active site. 58 76 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 SUPERFAMILY SSF52833 26 139 1.64E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 Gene3D G3DSA:3.40.30.10 32 141 8.5E-34 T 28-03-2018 DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 Pfam PF00085 Thioredoxin 39 137 1.0E-25 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 TIGRFAM TIGR01068 thioredoxin: thioredoxin 44 139 7.7E-34 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 PRINTS PR00421 Thioredoxin family signature 65 74 3.2E-8 T 28-03-2018 DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 PRINTS PR00421 Thioredoxin family signature 105 116 3.2E-8 T 28-03-2018 DDI_RS15290 e313557111b8eb09a97aa967330f7090 141 PRINTS PR00421 Thioredoxin family signature 57 65 3.2E-8 T 28-03-2018 DDI_RS07275 c6138a9be43922a9598305a29ba6e699 530 Gene3D G3DSA:3.10.105.10 301 502 8.8E-60 T 28-03-2018 DDI_RS07275 c6138a9be43922a9598305a29ba6e699 530 SUPERFAMILY SSF53850 24 528 7.5E-150 T 28-03-2018 DDI_RS07275 c6138a9be43922a9598305a29ba6e699 530 Gene3D G3DSA:3.40.190.10 164 300 9.3E-41 T 28-03-2018 DDI_RS07275 c6138a9be43922a9598305a29ba6e699 530 Gene3D G3DSA:3.90.76.10 50 163 5.8E-26 T 28-03-2018 DDI_RS07275 c6138a9be43922a9598305a29ba6e699 530 PIRSF PIRSF002741 5 529 2.9E-114 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS07275 c6138a9be43922a9598305a29ba6e699 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 449 1.3E-96 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 Gene3D G3DSA:1.10.10.10 1 76 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 3.5E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 SMART SM00866 88 232 6.6E-16 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 Pfam PF07702 UTRA domain 100 231 3.3E-14 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 SUPERFAMILY SSF64288 56 238 6.91E-29 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 SUPERFAMILY SSF46785 3 72 3.21E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 Gene3D G3DSA:3.40.1410.10 94 232 2.2E-26 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.8E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.8E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS20395 3f7fd1229f7264959f8cdaa030775123 244 SMART SM00345 9 68 6.9E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 5.3E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 5.3E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 5.3E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 5.3E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 Gene3D G3DSA:3.90.1150.10 1 92 2.2E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 Pfam PF00155 Aminotransferase class I and II 28 392 1.2E-91 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 SUPERFAMILY SSF53383 1 396 8.33E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 Gene3D G3DSA:3.40.640.10 93 305 8.6E-30 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DDI_RS11550 a7a9af96e1d9e24f61d9aee56b4a00c4 396 Gene3D G3DSA:3.90.1150.10 306 396 1.4E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS01015 f4c1ff5777cf5deefb3946191d87cd48 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 250 1.7E-61 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DDI_RS01015 f4c1ff5777cf5deefb3946191d87cd48 503 Gene3D G3DSA:3.30.420.40 1 246 4.5E-70 T 28-03-2018 DDI_RS01015 f4c1ff5777cf5deefb3946191d87cd48 503 SUPERFAMILY SSF53067 6 252 1.55E-75 T 28-03-2018 DDI_RS01015 f4c1ff5777cf5deefb3946191d87cd48 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 1.7E-41 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDI_RS01015 f4c1ff5777cf5deefb3946191d87cd48 503 SUPERFAMILY SSF53067 255 497 8.42E-56 T 28-03-2018 DDI_RS01015 f4c1ff5777cf5deefb3946191d87cd48 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDI_RS01015 f4c1ff5777cf5deefb3946191d87cd48 503 Gene3D G3DSA:3.30.420.40 247 503 4.6E-54 T 28-03-2018 DDI_RS01015 f4c1ff5777cf5deefb3946191d87cd48 503 PIRSF PIRSF000538 3 502 6.9E-124 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDI_RS20585 6d4ea5df6b63bb1f0b1ef47feeaf8037 351 Gene3D G3DSA:3.40.190.10 130 313 1.2E-23 T 28-03-2018 DDI_RS20585 6d4ea5df6b63bb1f0b1ef47feeaf8037 351 Pfam PF09084 NMT1/THI5 like 56 240 5.6E-12 T 28-03-2018 IPR015168 SsuA/THI5-like DDI_RS20585 6d4ea5df6b63bb1f0b1ef47feeaf8037 351 Gene3D G3DSA:3.40.190.10 22 129 2.3E-6 T 28-03-2018 DDI_RS20585 6d4ea5df6b63bb1f0b1ef47feeaf8037 351 SUPERFAMILY SSF53850 34 242 3.37E-34 T 28-03-2018 DDI_RS20585 6d4ea5df6b63bb1f0b1ef47feeaf8037 351 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 25 351 1.3E-155 T 28-03-2018 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein DDI_RS20715 c7b0fca9e3658cd30113bdfe5e08e570 310 SUPERFAMILY SSF53901 178 307 1.95E-16 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20715 c7b0fca9e3658cd30113bdfe5e08e570 310 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 306 9.3E-9 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDI_RS20715 c7b0fca9e3658cd30113bdfe5e08e570 310 Gene3D G3DSA:3.40.47.10 123 307 5.5E-14 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.6E-58 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 Gene3D G3DSA:3.40.50.720 307 499 7.9E-50 T 28-03-2018 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 SUPERFAMILY SSF52096 2 304 1.42E-67 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 Gene3D G3DSA:3.90.226.10 1 306 1.3E-66 T 28-03-2018 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 202 6.1E-39 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 SUPERFAMILY SSF48179 495 612 1.96E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 SUPERFAMILY SSF48179 623 714 1.02E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 1.6E-25 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 SUPERFAMILY SSF51735 314 495 6.31E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 Gene3D G3DSA:1.10.1040.10 503 592 1.2E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 Gene3D G3DSA:1.10.1040.10 622 714 2.5E-15 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS21335 ebd668df7f29df13b6cec1c6c004e81c 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 DDI_RS09340 50c1696049c8549d5717a32cee9c49c4 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 10 228 6.7E-24 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DDI_RS09340 50c1696049c8549d5717a32cee9c49c4 275 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 265 2.5E-74 T 28-03-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 DDI_RS09340 50c1696049c8549d5717a32cee9c49c4 275 SUPERFAMILY SSF56784 6 230 7.98E-45 T 28-03-2018 IPR023214 HAD-like domain DDI_RS09340 50c1696049c8549d5717a32cee9c49c4 275 Gene3D G3DSA:3.30.980.20 93 181 3.5E-29 T 28-03-2018 DDI_RS09340 50c1696049c8549d5717a32cee9c49c4 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 76 7.2E-9 T 28-03-2018 IPR023214 HAD-like domain DDI_RS09340 50c1696049c8549d5717a32cee9c49c4 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 169 230 7.3E-6 T 28-03-2018 IPR023214 HAD-like domain DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 74 96 1.8E-6 T 28-03-2018 DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 1.8E-6 T 28-03-2018 DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 300 324 1.8E-6 T 28-03-2018 DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 Gene3D G3DSA:1.20.1250.20 257 466 2.4E-18 T 28-03-2018 DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 Pfam PF07690 Major Facilitator Superfamily 15 407 3.9E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 413 4.0E-80 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 Gene3D G3DSA:1.20.1250.20 7 199 7.4E-32 T 28-03-2018 DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 SUPERFAMILY SSF103473 246 456 2.88E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS06130 f566d29af7dae9505c68a9c85d6f7034 480 SUPERFAMILY SSF103473 7 197 2.88E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 Gene3D G3DSA:1.10.275.10 3 141 1.7E-52 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 Gene3D G3DSA:1.10.40.30 419 468 7.9E-18 T 28-03-2018 DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 Pfam PF00206 Lyase 13 345 1.3E-105 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 Gene3D G3DSA:1.20.200.10 142 418 4.1E-68 T 28-03-2018 DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 Pfam PF10415 Fumarase C C-terminus 411 464 8.0E-17 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 SUPERFAMILY SSF48557 2 458 7.66E-141 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 2.7E-260 T 28-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 5.8E-27 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 5.8E-27 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 5.8E-27 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 5.8E-27 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS01545 269160665a84fcda381b4a6ad0b314b4 479 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDI_RS09895 f447cdc250166b82ec1a497386c68d8c 38 Pfam PF10736 Protein of unknown function (DUF2627) 1 37 4.9E-21 T 28-03-2018 IPR019672 Protein of unknown function DUF2627 DDI_RS14765 7aee4697f222ad09512f5ef6ce5b9901 264 Pfam PF01578 Cytochrome C assembly protein 37 262 1.0E-39 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DDI_RS18240 acded108665be4a4ad762d52f1103c6f 183 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 183 48.283 T 28-03-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 DDI_RS18240 acded108665be4a4ad762d52f1103c6f 183 Pfam PF02525 Flavodoxin-like fold 6 171 1.0E-40 T 28-03-2018 IPR003680 Flavodoxin-like fold DDI_RS18240 acded108665be4a4ad762d52f1103c6f 183 Gene3D G3DSA:3.40.50.360 1 180 1.8E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS18240 acded108665be4a4ad762d52f1103c6f 183 SUPERFAMILY SSF52218 5 177 3.26E-45 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS14285 7f802f22ea0d89716404f0bd43c49fdf 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 140 1.1E-36 T 28-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC DDI_RS14285 7f802f22ea0d89716404f0bd43c49fdf 156 PIRSF PIRSF004923 1 151 1.0E-42 T 28-03-2018 IPR026268 Protein RseC DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 214 225 - T 28-03-2018 IPR033116 Serine proteases, trypsin family, serine active site DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 SUPERFAMILY SSF50494 30 266 9.74E-29 T 28-03-2018 IPR009003 Peptidase S1, PA clan DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 Gene3D G3DSA:2.40.10.10 77 197 3.9E-9 T 28-03-2018 DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 Gene3D G3DSA:2.40.10.10 44 76 6.5E-9 T 28-03-2018 DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 Pfam PF00089 Trypsin 48 241 1.2E-12 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 Gene3D G3DSA:2.40.10.10 198 271 3.1E-7 T 28-03-2018 DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 PRINTS PR00839 V8 serine protease family signature 42 59 1.3E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 PRINTS PR00839 V8 serine protease family signature 67 84 1.3E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 PRINTS PR00839 V8 serine protease family signature 209 225 1.3E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 PRINTS PR00839 V8 serine protease family signature 175 188 1.3E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DDI_RS10880 c0122f29eae82c466bc51c60b46a76c7 272 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 78 83 - T 28-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 SUPERFAMILY SSF50715 340 549 1.1E-77 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 9.0E-294 T 28-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.2E-8 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.2E-8 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.2E-8 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 Gene3D G3DSA:2.40.240.10 344 464 5.0E-48 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 Gene3D G3DSA:2.40.240.10 465 548 1.2E-32 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 Gene3D G3DSA:1.10.1160.10 261 338 9.5E-35 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 6.0E-62 T 28-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.422 T 28-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 SUPERFAMILY SSF52374 28 346 5.0E-99 T 28-03-2018 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.6E-122 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 Gene3D G3DSA:3.40.50.620 28 152 4.5E-37 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS04980 5a313d63791da37efa64ed3db5554a6a 552 Gene3D G3DSA:3.40.50.620 156 260 3.0E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS20155 84de14cb3ac1e6021e34d5ad843d2277 319 Gene3D G3DSA:1.10.3720.10 12 305 1.6E-31 T 28-03-2018 DDI_RS20155 84de14cb3ac1e6021e34d5ad843d2277 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 303 7.3E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20155 84de14cb3ac1e6021e34d5ad843d2277 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 19 311 7.7E-92 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 DDI_RS20155 84de14cb3ac1e6021e34d5ad843d2277 319 SUPERFAMILY SSF161098 31 303 1.96E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01255 f419407a3cc214c01868c4920d850416 63 Gene3D G3DSA:1.10.1470.10 2 61 2.5E-5 T 28-03-2018 IPR008462 CsbD-like domain DDI_RS01255 f419407a3cc214c01868c4920d850416 63 SUPERFAMILY SSF69047 2 61 7.32E-13 T 28-03-2018 IPR008462 CsbD-like domain DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.4E-32 T 28-03-2018 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.4E-32 T 28-03-2018 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.4E-32 T 28-03-2018 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.4E-32 T 28-03-2018 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.4E-32 T 28-03-2018 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 Gene3D G3DSA:3.30.70.890 168 296 1.7E-27 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 SUPERFAMILY SSF55060 173 288 8.27E-32 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 Gene3D G3DSA:3.30.230.10 1 160 1.0E-25 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 SUPERFAMILY SSF54211 1 155 4.55E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 30.042 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 PIRSF PIRSF000676 1 308 1.3E-82 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 Pfam PF08544 GHMP kinases C terminal 217 287 1.3E-8 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 306 4.9E-111 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DDI_RS17080 02d956dc3eb1e71b985c2df204d0f0e1 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 2.6E-14 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 PIRSF PIRSF001217 8 616 4.4E-217 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 SUPERFAMILY SSF52096 34 179 1.23E-24 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 SUPERFAMILY SSF52096 210 285 1.23E-24 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 SUPERFAMILY SSF52096 466 528 2.71E-41 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 SUPERFAMILY SSF52096 311 438 2.71E-41 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 Gene3D G3DSA:3.90.226.10 318 610 1.3E-48 T 28-03-2018 DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 Gene3D G3DSA:3.40.1750.10 187 295 2.0E-23 T 28-03-2018 DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 4.5E-51 T 28-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 Pfam PF01343 Peptidase family S49 390 540 3.1E-48 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 Pfam PF01343 Peptidase family S49 139 290 2.1E-39 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DDI_RS08940 c99dca04d2b6a4c9cb82f53d03e8103a 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 9.4E-229 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 DDI_RS18160 4704d7bbfedd00a44e171c8d2e507c83 222 SMART SM00448 1 112 1.8E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS18160 4704d7bbfedd00a44e171c8d2e507c83 222 Gene3D G3DSA:1.10.10.10 121 222 2.2E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18160 4704d7bbfedd00a44e171c8d2e507c83 222 SUPERFAMILY SSF52172 1 171 1.66E-36 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS18160 4704d7bbfedd00a44e171c8d2e507c83 222 SMART SM00862 145 216 1.1E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS18160 4704d7bbfedd00a44e171c8d2e507c83 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 3.9E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS18160 4704d7bbfedd00a44e171c8d2e507c83 222 Pfam PF00072 Response regulator receiver domain 4 112 6.6E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS18160 4704d7bbfedd00a44e171c8d2e507c83 222 Gene3D G3DSA:3.40.50.2300 1 120 2.1E-32 T 28-03-2018 DDI_RS18200 e43f1b68bdc6c418d814bb09d1a7698c 285 SUPERFAMILY SSF54534 53 260 1.18E-63 T 28-03-2018 DDI_RS18200 e43f1b68bdc6c418d814bb09d1a7698c 285 Gene3D G3DSA:3.10.50.40 145 261 1.3E-42 T 28-03-2018 DDI_RS18200 e43f1b68bdc6c418d814bb09d1a7698c 285 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 43 163 1.6E-36 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DDI_RS18200 e43f1b68bdc6c418d814bb09d1a7698c 285 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 171 257 2.1E-27 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDI_RS18200 e43f1b68bdc6c418d814bb09d1a7698c 285 Gene3D G3DSA:1.10.287.460 37 144 6.5E-26 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 Pfam PF13377 Periplasmic binding protein-like domain 167 325 7.5E-33 T 28-03-2018 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 7.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 2 12 7.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 SMART SM00354 1 70 1.1E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 SUPERFAMILY SSF47413 2 58 6.49E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 Gene3D G3DSA:3.40.50.2300 57 160 1.1E-19 T 28-03-2018 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 Gene3D G3DSA:3.40.50.2300 161 326 3.5E-48 T 28-03-2018 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.1E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 SUPERFAMILY SSF53822 61 325 5.8E-66 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS13695 6a90420622059fc8defcc6e74ed0ddfe 326 Gene3D G3DSA:1.10.260.40 1 56 7.0E-23 T 28-03-2018 DDI_RS13785 b8bd9d68b724af8af2163d57d32aeda2 310 SMART SM00656 60 281 2.0E-27 T 28-03-2018 IPR002022 Pectate lyase DDI_RS13785 b8bd9d68b724af8af2163d57d32aeda2 310 SUPERFAMILY SSF51126 45 302 8.6E-40 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS13785 b8bd9d68b724af8af2163d57d32aeda2 310 Pfam PF00544 Pectate lyase 96 275 4.2E-37 T 28-03-2018 IPR002022 Pectate lyase DDI_RS13785 b8bd9d68b724af8af2163d57d32aeda2 310 Gene3D G3DSA:2.160.20.10 35 93 5.1E-4 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS13785 b8bd9d68b724af8af2163d57d32aeda2 310 Gene3D G3DSA:2.160.20.10 94 307 2.2E-22 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS13920 935864def03429b4c0860e1b3dfe682c 168 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 117 122 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DDI_RS13920 935864def03429b4c0860e1b3dfe682c 168 TIGRFAM TIGR00608 radc: DNA repair protein RadC 28 168 3.1E-41 T 28-03-2018 IPR001405 RadC protein DDI_RS13920 935864def03429b4c0860e1b3dfe682c 168 Gene3D G3DSA:3.40.140.10 44 168 7.4E-44 T 28-03-2018 DDI_RS13920 935864def03429b4c0860e1b3dfe682c 168 SUPERFAMILY SSF102712 61 141 1.83E-5 T 28-03-2018 DDI_RS13920 935864def03429b4c0860e1b3dfe682c 168 Pfam PF04002 RadC-like JAB domain 47 166 3.6E-43 T 28-03-2018 IPR025657 RadC-like JAB domain DDI_RS02055 f0d8cfff4da8135927e7447228bd774d 124 Pfam PF02316 Mu DNA-binding domain 10 112 1.1E-15 T 28-03-2018 IPR003314 Mu-type HTH domain GO:0003677 DDI_RS02055 f0d8cfff4da8135927e7447228bd774d 124 SUPERFAMILY SSF46955 3 69 1.74E-21 T 28-03-2018 IPR009061 Putative DNA-binding domain DDI_RS02055 f0d8cfff4da8135927e7447228bd774d 124 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 7 112 0.002 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 DDI_RS02055 f0d8cfff4da8135927e7447228bd774d 124 Gene3D G3DSA:1.10.10.10 3 68 3.5E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06500 1516c5969c00aa8926d76feedf7d05e3 310 Gene3D G3DSA:3.40.190.10 97 185 1.8E-15 T 28-03-2018 DDI_RS06500 1516c5969c00aa8926d76feedf7d05e3 310 SUPERFAMILY SSF53850 96 296 2.84E-32 T 28-03-2018 DDI_RS06500 1516c5969c00aa8926d76feedf7d05e3 310 Gene3D G3DSA:1.10.10.10 2 89 3.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06500 1516c5969c00aa8926d76feedf7d05e3 310 Pfam PF03466 LysR substrate binding domain 95 295 7.3E-38 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS06500 1516c5969c00aa8926d76feedf7d05e3 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 62 4.2E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06500 1516c5969c00aa8926d76feedf7d05e3 310 Gene3D G3DSA:3.40.190.10 186 273 7.0E-19 T 28-03-2018 DDI_RS06500 1516c5969c00aa8926d76feedf7d05e3 310 SUPERFAMILY SSF46785 7 116 4.84E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 Gene3D G3DSA:3.40.630.10 317 438 5.3E-13 T 28-03-2018 DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 22 425 2.5E-113 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 SUPERFAMILY SSF55031 234 340 8.77E-25 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 Pfam PF07687 Peptidase dimerisation domain 238 320 2.9E-11 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 PIRSF PIRSF005962 6 439 5.2E-120 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 Pfam PF01546 Peptidase family M20/M25/M40 120 434 2.0E-26 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 SUPERFAMILY SSF53187 347 436 2.12E-61 T 28-03-2018 DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 SUPERFAMILY SSF53187 100 248 2.12E-61 T 28-03-2018 DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 SUPERFAMILY SSF53187 9 60 2.12E-61 T 28-03-2018 DDI_RS17485 5a5f2c97a365be73afe99c929dd8c856 442 Gene3D G3DSA:3.40.630.10 6 316 1.3E-51 T 28-03-2018 DDI_RS09765 9c78eee7108ad4bc3733ee5320600a9b 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.936 T 28-03-2018 IPR022920 Disulphide bond formation protein DsbB DDI_RS09765 9c78eee7108ad4bc3733ee5320600a9b 176 Gene3D G3DSA:1.20.1550.10 1 176 2.6E-55 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain DDI_RS09765 9c78eee7108ad4bc3733ee5320600a9b 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.5E-46 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DDI_RS09765 9c78eee7108ad4bc3733ee5320600a9b 176 SUPERFAMILY SSF158442 15 161 2.22E-46 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 Gene3D G3DSA:3.40.50.300 22 421 2.2E-34 T 28-03-2018 DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 SMART SM00488 23 275 0.0075 T 28-03-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 SUPERFAMILY SSF52540 19 237 3.33E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 Pfam PF06733 DEAD_2 182 252 3.4E-5 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 SUPERFAMILY SSF52540 44 78 1.89E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 SUPERFAMILY SSF52540 480 601 1.89E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 Gene3D G3DSA:3.40.50.300 447 628 1.0E-10 T 28-03-2018 DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 Pfam PF13307 Helicase C-terminal domain 464 621 5.0E-35 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 SMART SM00487 21 347 0.0019 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS09820 bb3752e432cad00c1c4a9c525eabb204 639 SMART SM00491 479 608 3.0E-53 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 Gene3D G3DSA:3.40.1060.10 153 288 9.2E-44 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 61.719 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 Pfam PF00330 Aconitase family (aconitate hydratase) 8 457 1.2E-161 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 Gene3D G3DSA:3.30.499.10 312 466 5.5E-53 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 5.2E-267 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 Gene3D G3DSA:3.30.499.10 1 152 1.5E-40 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 SUPERFAMILY SSF53732 1 465 8.63E-169 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 286 300 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 133 148 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 119 132 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 82 95 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 209 222 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 108 116 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 343 354 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 399 412 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 PRINTS PR00415 Aconitase family signature 195 208 8.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16810 17a3c1677754ad883107f7acecbd97f7 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDI_RS10760 d570b9ef2b590cb4d1e00f09056f6174 172 Pfam PF04985 Phage tail tube protein FII 4 171 3.7E-64 T 28-03-2018 IPR006498 Tail tube protein DDI_RS10760 d570b9ef2b590cb4d1e00f09056f6174 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 172 1.7E-50 T 28-03-2018 IPR006498 Tail tube protein DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 SUPERFAMILY SSF51011 597 678 4.96E-20 T 28-03-2018 DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 Pfam PF13802 Galactose mutarotase-like 147 213 3.9E-22 T 28-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 Pfam PF01055 Glycosyl hydrolases family 31 238 683 5.3E-120 T 28-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 SUPERFAMILY SSF74650 2 243 5.02E-45 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 Gene3D G3DSA:3.20.20.80 238 616 1.3E-106 T 28-03-2018 DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 Gene3D G3DSA:2.60.40.1180 617 679 1.0E-24 T 28-03-2018 DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 Gene3D G3DSA:2.60.40.1180 680 786 7.2E-5 T 28-03-2018 DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 SUPERFAMILY SSF51445 247 594 1.79E-69 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS11655 05194fa52ca2751d948f8db2626af517 791 Gene3D G3DSA:2.60.40.1760 1 237 8.3E-39 T 28-03-2018 DDI_RS17350 8dcd886836499b95eb1d3a64d62db376 375 Gene3D G3DSA:3.40.50.2000 184 354 2.4E-33 T 28-03-2018 DDI_RS17350 8dcd886836499b95eb1d3a64d62db376 375 Pfam PF00534 Glycosyl transferases group 1 189 348 5.3E-29 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 DDI_RS17350 8dcd886836499b95eb1d3a64d62db376 375 Gene3D G3DSA:3.40.50.2000 11 183 4.7E-4 T 28-03-2018 DDI_RS17350 8dcd886836499b95eb1d3a64d62db376 375 Pfam PF13439 Glycosyltransferase Family 4 16 174 1.5E-15 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 DDI_RS17350 8dcd886836499b95eb1d3a64d62db376 375 SUPERFAMILY SSF53756 10 372 2.12E-65 T 28-03-2018 DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 Gene3D G3DSA:3.40.50.1450 14 164 2.3E-36 T 28-03-2018 IPR023430 Peptidase HybD-like domain DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 17 160 5.6E-50 T 28-03-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 PRINTS PR00446 Hydrogen uptake protein signature 28 39 1.2E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 PRINTS PR00446 Hydrogen uptake protein signature 46 63 1.2E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 PRINTS PR00446 Hydrogen uptake protein signature 69 79 1.2E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 PRINTS PR00446 Hydrogen uptake protein signature 16 28 1.2E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 PRINTS PR00446 Hydrogen uptake protein signature 80 96 1.2E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 SUPERFAMILY SSF53163 16 162 9.15E-35 T 28-03-2018 IPR023430 Peptidase HybD-like domain DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 Pfam PF01750 Hydrogenase maturation protease 36 152 1.1E-24 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS05865 8e7eafff67bc8ef4d07686113d40b340 165 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 17 152 9.2E-35 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SUPERFAMILY SSF55874 343 513 1.44E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SMART SM00073 819 914 3.2E-9 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Gene3D G3DSA:1.20.120.160 806 918 1.4E-13 T 28-03-2018 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Pfam PF01627 Hpt domain 828 906 3.3E-10 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SUPERFAMILY SSF47384 274 355 2.94E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Gene3D G3DSA:3.40.50.2300 662 793 7.8E-35 T 28-03-2018 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SMART SM00388 289 354 3.2E-24 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SUPERFAMILY SSF47226 766 779 8.24E-21 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SUPERFAMILY SSF47226 808 909 8.24E-21 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 6.2E-46 T 28-03-2018 IPR019247 Histidine kinase BarA, N-terminal DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Gene3D G3DSA:1.10.287.130 279 350 7.4E-21 T 28-03-2018 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SUPERFAMILY SSF158472 198 246 3.66E-5 T 28-03-2018 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 2.7E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 515 2.5E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Pfam PF00072 Response regulator receiver domain 672 782 2.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Gene3D G3DSA:3.40.50.2300 524 647 0.0025 T 28-03-2018 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SMART SM00448 670 783 2.0E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 Gene3D G3DSA:3.30.565.10 358 523 2.7E-49 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SUPERFAMILY SSF52172 670 787 6.97E-35 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SMART SM00387 401 517 1.3E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS15525 210a035b4070685d77e7d7ed35e42275 921 SMART SM00304 197 249 1.2E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS17565 06aba5197f99963f0dc5dd03c3688519 155 SUPERFAMILY SSF53146 16 127 7.06E-28 T 28-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis DDI_RS17565 06aba5197f99963f0dc5dd03c3688519 155 Gene3D G3DSA:3.30.420.130 13 133 5.6E-26 T 28-03-2018 DDI_RS17565 06aba5197f99963f0dc5dd03c3688519 155 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 28 119 1.8E-16 T 28-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis DDI_RS01415 bcfdb62c4ca105f4913434323c7fd0b2 383 Gene3D G3DSA:3.30.360.10 143 376 8.3E-40 T 28-03-2018 DDI_RS01415 bcfdb62c4ca105f4913434323c7fd0b2 383 SUPERFAMILY SSF55347 128 213 1.36E-24 T 28-03-2018 DDI_RS01415 bcfdb62c4ca105f4913434323c7fd0b2 383 SUPERFAMILY SSF55347 241 324 1.36E-24 T 28-03-2018 DDI_RS01415 bcfdb62c4ca105f4913434323c7fd0b2 383 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 205 1.7E-4 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 DDI_RS01415 bcfdb62c4ca105f4913434323c7fd0b2 383 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 116 1.1E-14 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDI_RS01415 bcfdb62c4ca105f4913434323c7fd0b2 383 Gene3D G3DSA:3.40.50.720 1 142 3.2E-25 T 28-03-2018 DDI_RS01415 bcfdb62c4ca105f4913434323c7fd0b2 383 SUPERFAMILY SSF51735 2 151 3.74E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02560 7f92535ba0a3cb1325fae8e5b9080b4c 295 Gene3D G3DSA:1.10.3720.10 21 283 6.4E-36 T 28-03-2018 DDI_RS02560 7f92535ba0a3cb1325fae8e5b9080b4c 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 281 2.2E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS02560 7f92535ba0a3cb1325fae8e5b9080b4c 295 SUPERFAMILY SSF161098 25 295 1.83E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 442 460 - T 28-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 Pfam PF00145 C-5 cytosine-specific DNA methylase 97 459 7.5E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 Gene3D G3DSA:3.40.50.150 90 322 1.2E-58 T 28-03-2018 DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 99 460 3.0E-107 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 227 241 1.1E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 281 294 1.1E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 98 114 1.1E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 179 191 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 SUPERFAMILY SSF53335 97 463 6.65E-77 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS00955 4b6d31025aac9c683664d1986a5837e4 476 Gene3D G3DSA:3.90.120.10 323 448 1.6E-26 T 28-03-2018 DDI_RS12425 99afe65f6c6a6e29d3f6cf9f4d622039 186 Gene3D G3DSA:1.10.357.10 55 179 1.7E-11 T 28-03-2018 DDI_RS12425 99afe65f6c6a6e29d3f6cf9f4d622039 186 SUPERFAMILY SSF46689 3 70 3.33E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS12425 99afe65f6c6a6e29d3f6cf9f4d622039 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.1E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS12425 99afe65f6c6a6e29d3f6cf9f4d622039 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.1E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS12425 99afe65f6c6a6e29d3f6cf9f4d622039 186 SUPERFAMILY SSF48498 79 178 2.76E-21 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS12425 99afe65f6c6a6e29d3f6cf9f4d622039 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 4.8E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS12425 99afe65f6c6a6e29d3f6cf9f4d622039 186 Gene3D G3DSA:1.10.10.60 2 54 4.1E-15 T 28-03-2018 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Gene3D G3DSA:3.40.50.620 1 232 4.7E-79 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.3E-53 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 6.3E-53 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.3E-53 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 6.3E-53 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.3E-53 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 6.3E-53 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.3E-53 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Gene3D G3DSA:3.40.50.620 405 563 1.4E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 8.7E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 6.7E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 171 3.9E-26 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 SUPERFAMILY SSF50677 226 415 1.04E-55 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 SUPERFAMILY SSF47323 662 859 4.67E-35 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.186 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Pfam PF08264 Anticodon-binding domain of tRNA 700 822 5.8E-16 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 8.9E-77 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Gene3D G3DSA:1.10.730.10 564 859 7.4E-52 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 Gene3D G3DSA:3.90.740.10 233 404 7.7E-52 T 28-03-2018 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 SUPERFAMILY SSF52374 416 668 1.26E-140 T 28-03-2018 DDI_RS04860 bc1a03b6249dd7cf8398f62c9a23711a 860 SUPERFAMILY SSF52374 5 226 1.26E-140 T 28-03-2018 DDI_RS02210 28d0a9e8233045b733219154af0e0efa 259 SMART SM01133 10 246 1.0E-76 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DDI_RS02210 28d0a9e8233045b733219154af0e0efa 259 PIRSF PIRSF001357 5 255 3.2E-75 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DDI_RS02210 28d0a9e8233045b733219154af0e0efa 259 Pfam PF01791 DeoC/LacD family aldolase 14 221 1.1E-43 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DDI_RS02210 28d0a9e8233045b733219154af0e0efa 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 52.579 T 28-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 DDI_RS02210 28d0a9e8233045b733219154af0e0efa 259 Gene3D G3DSA:3.20.20.70 1 258 3.3E-79 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS02210 28d0a9e8233045b733219154af0e0efa 259 SUPERFAMILY SSF51569 6 246 3.24E-79 T 28-03-2018 DDI_RS02210 28d0a9e8233045b733219154af0e0efa 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 12 232 2.0E-78 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 Pfam PF13183 4Fe-4S dicluster domain 309 376 5.5E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 Pfam PF11870 Domain of unknown function (DUF3390) 386 468 3.0E-12 T 28-03-2018 IPR024569 4Fe-4S binding protein, C-terminal DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 453 3.7E-221 T 28-03-2018 IPR004452 4Fe-4S binding protein GO:0019516 DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 SUPERFAMILY SSF46548 282 391 1.31E-18 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 Gene3D G3DSA:3.40.50.10420 63 137 3.3E-7 T 28-03-2018 DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 Gene3D G3DSA:3.40.50.10420 138 284 4.2E-47 T 28-03-2018 DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 362 373 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 SUPERFAMILY SSF100950 135 295 7.53E-38 T 28-03-2018 DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 Gene3D G3DSA:1.10.1060.10 313 395 2.7E-15 T 28-03-2018 DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 Gene3D G3DSA:3.30.70.20 285 312 0.022 T 28-03-2018 DDI_RS10895 e82b4e048cabd60f8820ec0a2e868398 473 Pfam PF02589 LUD domain 72 294 3.3E-55 T 28-03-2018 IPR003741 LUD domain DDI_RS07455 a6dcc085e923cde3f4cbc0dfcb053097 481 Gene3D G3DSA:1.20.1600.10 25 478 9.3E-68 T 28-03-2018 DDI_RS07455 a6dcc085e923cde3f4cbc0dfcb053097 481 SUPERFAMILY SSF56954 121 471 5.23E-54 T 28-03-2018 DDI_RS07455 a6dcc085e923cde3f4cbc0dfcb053097 481 SUPERFAMILY SSF56954 11 92 5.23E-54 T 28-03-2018 DDI_RS07455 a6dcc085e923cde3f4cbc0dfcb053097 481 Pfam PF02321 Outer membrane efflux protein 118 261 1.2E-11 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS07455 a6dcc085e923cde3f4cbc0dfcb053097 481 Pfam PF02321 Outer membrane efflux protein 285 468 2.2E-18 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS19605 adfa05b4943a338442d4c0e5b3668a29 111 Pfam PF10625 Universal stress protein B (UspB) 1 107 1.3E-53 T 28-03-2018 IPR019598 Universal stress protein B DDI_RS19605 adfa05b4943a338442d4c0e5b3668a29 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.409 T 28-03-2018 IPR019598 Universal stress protein B DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 SMART SM00388 672 739 2.1E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 839 1.5E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 876 1.5E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 882 895 1.5E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Pfam PF00512 His Kinase A (phospho-acceptor) domain 673 738 8.2E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Gene3D G3DSA:3.30.565.10 723 897 5.2E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 SMART SM00387 783 898 7.4E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Pfam PF13492 GAF domain 532 653 1.0E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 785 897 2.6E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Gene3D G3DSA:3.40.50.620 228 383 3.0E-10 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 SUPERFAMILY SSF52402 254 358 1.84E-6 T 28-03-2018 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 3.5E-97 T 28-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Pfam PF13493 Domain of unknown function (DUF4118) 406 511 3.9E-27 T 28-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 SUPERFAMILY SSF55874 728 902 1.96E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Gene3D G3DSA:1.20.120.620 404 503 7.0E-24 T 28-03-2018 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Gene3D G3DSA:3.30.450.40 504 663 1.2E-4 T 28-03-2018 IPR029016 GAF domain-like DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 SUPERFAMILY SSF47384 668 739 2.94E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Gene3D G3DSA:1.10.287.130 664 722 6.1E-11 T 28-03-2018 DDI_RS05030 a8e9be370ab9e73988197594af45b715 909 Gene3D G3DSA:3.40.50.300 22 148 2.6E-24 T 28-03-2018 DDI_RS13575 7a89550ccabe87dee7599eb535419225 137 SMART SM00881 9 104 1.2E-25 T 28-03-2018 IPR003781 CoA-binding GO:0048037 DDI_RS13575 7a89550ccabe87dee7599eb535419225 137 Pfam PF13380 CoA binding domain 14 130 2.7E-38 T 28-03-2018 IPR003781 CoA-binding GO:0048037 DDI_RS13575 7a89550ccabe87dee7599eb535419225 137 Gene3D G3DSA:3.40.50.720 10 134 6.6E-34 T 28-03-2018 DDI_RS13575 7a89550ccabe87dee7599eb535419225 137 SUPERFAMILY SSF51735 3 135 7.1E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 Gene3D G3DSA:3.40.50.300 131 334 4.5E-63 T 28-03-2018 DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 323 6.5E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 SUPERFAMILY SSF52540 144 394 4.6E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 ProSitePatterns PS00674 AAA-protein family signature. 294 312 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 SMART SM00382 187 326 1.9E-26 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 596 2.5E-247 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 SUPERFAMILY SSF140990 405 604 2.49E-72 T 28-03-2018 DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 Gene3D G3DSA:1.10.8.60 335 414 1.4E-25 T 28-03-2018 DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 612 37.415 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 Pfam PF01434 Peptidase family M41 385 594 9.4E-82 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DDI_RS02105 84c345adeaccee1dc4464029610d6789 650 Pfam PF06480 FtsH Extracellular 8 96 1.7E-15 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 SUPERFAMILY SSF46689 188 237 1.37E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 SMART SM00342 203 286 2.5E-34 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 Pfam PF12833 Helix-turn-helix domain 209 287 1.6E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 1.8E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 1.8E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 Gene3D G3DSA:1.10.10.60 14 240 3.3E-14 T 28-03-2018 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 SUPERFAMILY SSF46689 239 288 7.62E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS07265 869e96b6a04296a305eea96bb1314433 291 Gene3D G3DSA:1.10.10.60 241 290 2.1E-17 T 28-03-2018 DDI_RS04245 24621b928eeea6a2d00f5ecc7618927e 204 Pfam PF00510 Cytochrome c oxidase subunit III 11 202 7.5E-18 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04245 24621b928eeea6a2d00f5ecc7618927e 204 Gene3D G3DSA:1.20.120.80 19 204 1.7E-55 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04245 24621b928eeea6a2d00f5ecc7618927e 204 SUPERFAMILY SSF81452 10 202 6.41E-61 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04245 24621b928eeea6a2d00f5ecc7618927e 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 3.1E-89 T 28-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 DDI_RS19680 b6c9fb780a336a263ca0c5ec93b626ce 476 Gene3D G3DSA:3.20.20.140 144 246 2.7E-8 T 28-03-2018 DDI_RS19680 b6c9fb780a336a263ca0c5ec93b626ce 476 SUPERFAMILY SSF89550 148 362 3.14E-23 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 2.1E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 2.1E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 187 195 2.1E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 2.1E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 171 181 2.1E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 10 235 1.4E-45 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 Gene3D G3DSA:3.40.50.620 2 146 3.5E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 Gene3D G3DSA:3.40.50.620 155 299 3.3E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 7 291 41.41 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 7 269 6.0E-111 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 DDI_RS14515 8a4afbc80cd26d73374b53ce0053f9c5 302 SUPERFAMILY SSF52374 7 285 3.75E-88 T 28-03-2018 DDI_RS18005 6a1197c4e31e5bf5fb3d88a4ef243056 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 7.5E-28 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18005 6a1197c4e31e5bf5fb3d88a4ef243056 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.39 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18005 6a1197c4e31e5bf5fb3d88a4ef243056 59 Gene3D G3DSA:3.30.1390.20 5 59 2.0E-24 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DDI_RS18005 6a1197c4e31e5bf5fb3d88a4ef243056 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 28-03-2018 IPR018038 Ribosomal protein L30, conserved site DDI_RS18005 6a1197c4e31e5bf5fb3d88a4ef243056 59 PIRSF PIRSF002211 1 59 1.1E-29 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18005 6a1197c4e31e5bf5fb3d88a4ef243056 59 SUPERFAMILY SSF55129 3 59 1.31E-21 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DDI_RS18005 6a1197c4e31e5bf5fb3d88a4ef243056 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 8.4E-20 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DDI_RS14160 204eca540a85ddd28f23fa8a531eb8b1 404 Pfam PF00544 Pectate lyase 95 324 1.2E-95 T 28-03-2018 IPR002022 Pectate lyase DDI_RS14160 204eca540a85ddd28f23fa8a531eb8b1 404 Gene3D G3DSA:2.160.20.10 114 404 7.7E-58 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS14160 204eca540a85ddd28f23fa8a531eb8b1 404 Gene3D G3DSA:2.160.20.10 44 113 1.2E-11 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS14160 204eca540a85ddd28f23fa8a531eb8b1 404 SMART SM00656 71 330 3.7E-153 T 28-03-2018 IPR002022 Pectate lyase DDI_RS14160 204eca540a85ddd28f23fa8a531eb8b1 404 SUPERFAMILY SSF51126 52 403 4.13E-84 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 Pfam PF02040 Arsenical pump membrane protein 3 423 6.0E-160 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS05690 0f6fc60f439aacbb196905cb6644591a 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 1.9E-218 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DDI_RS15295 da36147c3fc6b7d82134167c9d00bae7 238 Pfam PF03942 DTW domain 30 213 3.6E-42 T 28-03-2018 IPR005636 DTW DDI_RS15295 da36147c3fc6b7d82134167c9d00bae7 238 SMART SM01144 27 219 2.3E-71 T 28-03-2018 IPR005636 DTW DDI_RS06090 faa5a0ecf3126c03d8eae3d42d6b80c9 292 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 6 289 6.5E-123 T 28-03-2018 IPR013418 CRISPR-associated protein Csd2 DDI_RS06090 faa5a0ecf3126c03d8eae3d42d6b80c9 292 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 3 277 5.0E-91 T 28-03-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C DDI_RS06090 faa5a0ecf3126c03d8eae3d42d6b80c9 292 Pfam PF05107 CRISPR-associated protein Cas7 5 277 1.8E-110 T 28-03-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C DDI_RS21070 1a3cd1a6b33b9ffb330fc6b0301e6dc9 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDI_RS21070 1a3cd1a6b33b9ffb330fc6b0301e6dc9 198 SUPERFAMILY SSF46689 10 73 1.25E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS21070 1a3cd1a6b33b9ffb330fc6b0301e6dc9 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.483 T 28-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 DDI_RS21070 1a3cd1a6b33b9ffb330fc6b0301e6dc9 198 Gene3D G3DSA:1.10.357.10 59 192 1.3E-17 T 28-03-2018 DDI_RS21070 1a3cd1a6b33b9ffb330fc6b0301e6dc9 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 1.7E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS21070 1a3cd1a6b33b9ffb330fc6b0301e6dc9 198 Gene3D G3DSA:1.10.10.60 3 58 8.8E-13 T 28-03-2018 DDI_RS21070 1a3cd1a6b33b9ffb330fc6b0301e6dc9 198 SUPERFAMILY SSF48498 84 184 1.74E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS04330 4caa9247a521699065367cdc19399965 597 SUPERFAMILY SSF90123 12 323 1.1E-66 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS04330 4caa9247a521699065367cdc19399965 597 SUPERFAMILY SSF52540 337 575 5.33E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04330 4caa9247a521699065367cdc19399965 597 SMART SM00382 366 551 3.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04330 4caa9247a521699065367cdc19399965 597 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS04330 4caa9247a521699065367cdc19399965 597 Gene3D G3DSA:3.40.50.300 338 583 6.3E-68 T 28-03-2018 DDI_RS04330 4caa9247a521699065367cdc19399965 597 Pfam PF00005 ABC transporter 357 505 2.0E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS04330 4caa9247a521699065367cdc19399965 597 Gene3D G3DSA:1.20.1560.10 5 325 7.6E-60 T 28-03-2018 DDI_RS04330 4caa9247a521699065367cdc19399965 597 Pfam PF00664 ABC transporter transmembrane region 27 295 1.0E-39 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS10520 c3b6098456b63949888efb0230c0f9ac 518 Pfam PF01966 HD domain 64 252 8.4E-6 T 28-03-2018 IPR006674 HD domain DDI_RS10520 c3b6098456b63949888efb0230c0f9ac 518 Gene3D G3DSA:1.10.3210.10 15 382 1.9E-61 T 28-03-2018 DDI_RS10520 c3b6098456b63949888efb0230c0f9ac 518 SMART SM00471 60 259 3.9E-12 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS10520 c3b6098456b63949888efb0230c0f9ac 518 SUPERFAMILY SSF109604 230 483 7.46E-70 T 28-03-2018 DDI_RS10520 c3b6098456b63949888efb0230c0f9ac 518 SUPERFAMILY SSF109604 17 135 7.46E-70 T 28-03-2018 DDI_RS10520 c3b6098456b63949888efb0230c0f9ac 518 SUPERFAMILY SSF109604 166 203 7.46E-70 T 28-03-2018 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 Gene3D G3DSA:1.10.10.10 213 283 1.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 SUPERFAMILY SSF46894 204 282 1.94E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 253 265 9.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 237 253 9.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 223 237 9.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 ProSitePatterns PS00622 LuxR-type HTH domain signature. 237 264 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 Pfam PF00196 Bacterial regulatory proteins, luxR family 222 277 8.4E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 SMART SM00421 220 277 1.6E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 Pfam PF03472 Autoinducer binding domain 61 205 1.1E-22 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 Gene3D G3DSA:3.30.450.80 21 212 5.6E-29 T 28-03-2018 DDI_RS05510 d228636b99cc843aa96d40a5a9d50d50 283 SUPERFAMILY SSF75516 46 212 1.1E-24 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 Gene3D G3DSA:1.20.120.530 84 230 1.3E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 1.4E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 1.4E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 SMART SM00895 91 215 2.9E-18 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 4.2E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 SMART SM00345 23 81 8.1E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 SUPERFAMILY SSF46785 13 85 1.09E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 Pfam PF07729 FCD domain 95 214 2.0E-23 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 Gene3D G3DSA:1.10.10.10 5 83 1.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS13310 7773aaaa494919be8731a4039e8951d7 234 SUPERFAMILY SSF48008 88 219 7.32E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS06305 fe6ba5c3583516644c4a1f84eee997e4 470 Gene3D G3DSA:3.30.70.270 294 469 2.7E-48 T 28-03-2018 DDI_RS06305 fe6ba5c3583516644c4a1f84eee997e4 470 SUPERFAMILY SSF55073 311 468 9.42E-41 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS06305 fe6ba5c3583516644c4a1f84eee997e4 470 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 467 1.9E-39 T 28-03-2018 IPR000160 GGDEF domain DDI_RS06305 fe6ba5c3583516644c4a1f84eee997e4 470 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 304 468 8.1E-41 T 28-03-2018 IPR000160 GGDEF domain DDI_RS06305 fe6ba5c3583516644c4a1f84eee997e4 470 SMART SM00267 295 470 4.3E-50 T 28-03-2018 IPR000160 GGDEF domain DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 Pfam PF02503 Polyphosphate kinase middle domain 119 320 1.2E-41 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 9.3E-147 T 28-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 Gene3D G3DSA:3.30.1840.10 109 307 6.7E-51 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 Gene3D G3DSA:3.30.870.10 317 499 2.8E-24 T 28-03-2018 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.2E-30 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 Gene3D G3DSA:1.20.58.310 9 108 2.6E-33 T 28-03-2018 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 SUPERFAMILY SSF143724 107 313 4.12E-60 T 28-03-2018 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 2.2E-257 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 SUPERFAMILY SSF140356 3 105 6.8E-33 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 SUPERFAMILY SSF56024 500 681 1.17E-68 T 28-03-2018 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 PIRSF PIRSF015589 1 688 9.6E-244 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 Gene3D G3DSA:3.30.870.10 500 685 5.4E-35 T 28-03-2018 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 SUPERFAMILY SSF56024 317 496 7.85E-57 T 28-03-2018 DDI_RS13515 bfcd6234cd99a035fa76e514d1e77524 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 681 27.13 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 869 7.4E-122 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 Gene3D G3DSA:2.60.40.1730 15 194 5.4E-32 T 28-03-2018 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 SUPERFAMILY SSF55486 204 450 1.3E-75 T 28-03-2018 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 Gene3D G3DSA:1.10.390.10 280 443 4.2E-52 T 28-03-2018 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 4.0E-32 T 28-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 SUPERFAMILY SSF63737 1 193 2.35E-47 T 28-03-2018 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 28-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 2.9E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 2.9E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 2.9E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 2.9E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 2.9E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 Gene3D G3DSA:1.25.50.10 546 870 3.2E-125 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DDI_RS11520 672463d127382996cdc0dd310f9e2bca 871 Pfam PF01433 Peptidase family M1 domain 208 439 3.9E-60 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 Gene3D G3DSA:2.30.42.10 254 353 1.2E-19 T 28-03-2018 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 SMART SM00228 266 338 6.4E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 SUPERFAMILY SSF50494 44 253 1.38E-60 T 28-03-2018 IPR009003 Peptidase S1, PA clan DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 4.3E-154 T 28-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 263 334 2.0E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 SUPERFAMILY SSF50156 237 346 4.6E-20 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 Gene3D G3DSA:2.40.10.10 130 246 5.9E-35 T 28-03-2018 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 Gene3D G3DSA:2.40.10.10 27 129 4.1E-29 T 28-03-2018 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 Pfam PF13365 Trypsin-like peptidase domain 80 214 1.4E-29 T 28-03-2018 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 6.7E-49 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 6.7E-49 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 6.7E-49 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 6.7E-49 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 6.7E-49 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00300 da5ee6bc50f6944b5bac389ab921c2a0 353 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 6.7E-49 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 SUPERFAMILY SSF51735 3 164 7.43E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 Gene3D G3DSA:3.40.50.720 3 164 5.1E-35 T 28-03-2018 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 60.834 T 28-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 1.5E-50 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 6.3E-146 T 28-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 SUPERFAMILY SSF48179 164 293 1.36E-36 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 Gene3D G3DSA:1.10.1040.10 165 291 4.8E-30 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 3.8E-38 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DDI_RS15535 7c014d97b458bba92b81cb9bfd69ad97 296 PIRSF PIRSF000103 1 295 2.7E-92 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 SMART SM00091 25 92 7.4E-8 T 28-03-2018 IPR000014 PAS domain DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 SMART SM00091 151 213 200.0 T 28-03-2018 IPR000014 PAS domain DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 SUPERFAMILY SSF55874 350 486 2.01E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 SMART SM00086 97 139 4.4E-6 T 28-03-2018 IPR001610 PAC motif DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 TIGRFAM TIGR02938 nifL_nitrog: nitrogen fixation negative regulator NifL 24 341 2.3E-75 T 28-03-2018 IPR014285 Nitrogen fixation negative regulator NifL GO:0004871|GO:0007165|GO:0009399|GO:0050660 DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 Gene3D G3DSA:3.30.450.20 19 143 2.1E-29 T 28-03-2018 DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 SUPERFAMILY SSF55785 30 137 3.14E-29 T 28-03-2018 IPR000014 PAS domain DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 Pfam PF00989 PAS fold 27 136 1.4E-20 T 28-03-2018 IPR013767 PAS fold GO:0006355 DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 Gene3D G3DSA:3.30.565.10 255 487 1.9E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 146 2.1E-20 T 28-03-2018 IPR000014 PAS domain DDI_RS17515 63ea6b0cecbcb2026a47a3f9ee067582 521 Gene3D G3DSA:3.30.450.20 144 207 3.2E-5 T 28-03-2018 DDI_RS14025 1594c3a3c7761e604808986b0da78487 331 SMART SM00530 20 81 1.2E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS14025 1594c3a3c7761e604808986b0da78487 331 Pfam PF13413 Helix-turn-helix domain 20 81 7.0E-16 T 28-03-2018 DDI_RS14025 1594c3a3c7761e604808986b0da78487 331 SUPERFAMILY SSF47413 14 82 3.75E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS14025 1594c3a3c7761e604808986b0da78487 331 Gene3D G3DSA:1.10.260.40 10 90 1.1E-13 T 28-03-2018 DDI_RS14025 1594c3a3c7761e604808986b0da78487 331 Pfam PF13464 Domain of unknown function (DUF4115) 254 328 5.6E-24 T 28-03-2018 IPR025194 Domain of unknown function DUF4115 DDI_RS14605 fad73b86a0f01fd801ddd14c49d0a49b 135 SUPERFAMILY SSF52218 2 132 4.33E-22 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS14605 fad73b86a0f01fd801ddd14c49d0a49b 135 Pfam PF07972 NrdI Flavodoxin like 5 123 4.3E-45 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI DDI_RS14605 fad73b86a0f01fd801ddd14c49d0a49b 135 PIRSF PIRSF005087 1 135 1.1E-49 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI DDI_RS14605 fad73b86a0f01fd801ddd14c49d0a49b 135 TIGRFAM TIGR00333 nrdI: nrdI protein 5 130 5.1E-49 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI DDI_RS14605 fad73b86a0f01fd801ddd14c49d0a49b 135 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 33.775 T 28-03-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial DDI_RS14605 fad73b86a0f01fd801ddd14c49d0a49b 135 Gene3D G3DSA:3.40.50.360 4 132 3.3E-22 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 1.8E-48 T 28-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 SUPERFAMILY SSF48498 84 203 1.75E-14 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 Gene3D G3DSA:1.10.10.60 1 37 1.3E-17 T 28-03-2018 DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 SUPERFAMILY SSF46689 2 80 9.98E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.2E-20 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 Gene3D G3DSA:1.10.357.10 66 206 7.4E-11 T 28-03-2018 DDI_RS04395 5fd5bccd41a40d46266c235752b9cab1 216 Gene3D G3DSA:1.10.260.40 38 65 3.3E-12 T 28-03-2018 DDI_RS18685 f6572598bf6b820f8dca1aa31c4da47a 302 Gene3D G3DSA:1.10.443.10 116 291 9.6E-43 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS18685 f6572598bf6b820f8dca1aa31c4da47a 302 SUPERFAMILY SSF47823 11 101 3.92E-9 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal DDI_RS18685 f6572598bf6b820f8dca1aa31c4da47a 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 9 297 55.886 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD DDI_RS18685 f6572598bf6b820f8dca1aa31c4da47a 302 Gene3D G3DSA:1.10.150.130 3 115 3.0E-21 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS18685 f6572598bf6b820f8dca1aa31c4da47a 302 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 299 1.7E-105 T 28-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 DDI_RS18685 f6572598bf6b820f8dca1aa31c4da47a 302 Pfam PF00589 Phage integrase family 116 283 1.4E-50 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS18685 f6572598bf6b820f8dca1aa31c4da47a 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 6.9E-23 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DDI_RS18685 f6572598bf6b820f8dca1aa31c4da47a 302 SUPERFAMILY SSF56349 112 295 6.47E-53 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 Gene3D G3DSA:2.30.30.20 102 150 1.1E-18 T 28-03-2018 DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-37 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 150 3.9E-19 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 SUPERFAMILY SSF57825 102 151 4.84E-15 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 SUPERFAMILY SSF54893 2 100 3.79E-35 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 151 1.3E-65 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 9.8E-30 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.642 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 DDI_RS00690 43db6f816824183e8d1703815b5f8237 154 Gene3D G3DSA:3.30.70.140 5 97 1.3E-33 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DDI_RS08420 4048b396e5c0de199166df2374723e58 144 Gene3D G3DSA:1.10.10.10 15 144 7.6E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08420 4048b396e5c0de199166df2374723e58 144 Pfam PF01638 HxlR-like helix-turn-helix 33 120 3.3E-24 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type DDI_RS08420 4048b396e5c0de199166df2374723e58 144 SUPERFAMILY SSF46785 19 132 1.29E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18630 19bef3d519accbd7a700e71e90159c88 330 SUPERFAMILY SSF53474 15 329 2.4E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS18630 19bef3d519accbd7a700e71e90159c88 330 Pfam PF12146 Serine aminopeptidase, S33 52 312 5.5E-58 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 DDI_RS18630 19bef3d519accbd7a700e71e90159c88 330 Gene3D G3DSA:3.40.50.1820 27 329 1.2E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 Gene3D G3DSA:2.60.40.420 269 490 5.9E-19 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 SUPERFAMILY SSF49503 108 136 3.77E-19 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 SUPERFAMILY SSF49503 180 251 3.77E-19 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 SUPERFAMILY SSF49503 328 361 3.26E-14 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 SUPERFAMILY SSF49503 605 711 3.26E-14 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 ProSitePatterns PS00079 Multicopper oxidases signature 1. 690 710 - T 28-03-2018 IPR033138 Multicopper oxidases, conserved site DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 Pfam PF07731 Multicopper oxidase 581 710 1.3E-12 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 Gene3D G3DSA:2.60.40.420 45 248 9.4E-25 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 Gene3D G3DSA:2.60.40.420 576 714 3.6E-17 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 SUPERFAMILY SSF49503 404 450 2.22E-11 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 SUPERFAMILY SSF49503 312 368 2.22E-11 T 28-03-2018 IPR008972 Cupredoxin DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 ProSitePatterns PS00080 Multicopper oxidases signature 2. 695 706 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 DDI_RS12655 49b74052b5c2c7329aec5ea50d84cf1a 726 Pfam PF07732 Multicopper oxidase 178 250 1.5E-9 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DDI_RS19265 f18713a25a4b8787caaf1ef9d6606923 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 293 2.3E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19265 f18713a25a4b8787caaf1ef9d6606923 295 SUPERFAMILY SSF161098 56 283 4.71E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19265 f18713a25a4b8787caaf1ef9d6606923 295 Gene3D G3DSA:1.10.3720.10 13 295 2.7E-42 T 28-03-2018 DDI_RS07150 c920b3d564b05410630e04bb3fdbbdc0 260 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 259 27.673 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 DDI_RS07150 c920b3d564b05410630e04bb3fdbbdc0 260 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 259 2.0E-63 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 DDI_RS07150 c920b3d564b05410630e04bb3fdbbdc0 260 Gene3D G3DSA:3.40.50.150 6 234 2.3E-34 T 28-03-2018 DDI_RS07150 c920b3d564b05410630e04bb3fdbbdc0 260 Pfam PF08241 Methyltransferase domain 56 147 4.5E-25 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 DDI_RS07150 c920b3d564b05410630e04bb3fdbbdc0 260 SUPERFAMILY SSF53335 19 187 2.19E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 1.3E-53 T 28-03-2018 DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.5E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.5E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.5E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.5E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 4.5E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.5E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.8E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.8E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.8E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 Gene3D G3DSA:3.40.50.720 2 243 2.4E-59 T 28-03-2018 DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 243 3.0E-128 T 28-03-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS20120 499b06c1cf9be1524de2be684d164fd4 243 SUPERFAMILY SSF51735 3 242 3.86E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS03270 5c87d49f72305b7f27998b80904c4be2 229 SMART SM00862 154 228 1.7E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS03270 5c87d49f72305b7f27998b80904c4be2 229 SUPERFAMILY SSF52172 2 122 2.13E-40 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS03270 5c87d49f72305b7f27998b80904c4be2 229 SMART SM00448 4 114 2.9E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS03270 5c87d49f72305b7f27998b80904c4be2 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 1.0E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS03270 5c87d49f72305b7f27998b80904c4be2 229 Gene3D G3DSA:3.40.50.2300 1 120 4.3E-36 T 28-03-2018 DDI_RS03270 5c87d49f72305b7f27998b80904c4be2 229 Pfam PF00072 Response regulator receiver domain 6 114 1.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS03270 5c87d49f72305b7f27998b80904c4be2 229 SUPERFAMILY SSF46894 127 228 1.42E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS03270 5c87d49f72305b7f27998b80904c4be2 229 Gene3D G3DSA:1.10.10.10 121 229 1.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 Gene3D G3DSA:2.160.20.10 149 603 5.4E-84 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 Gene3D G3DSA:2.60.40.10 32 148 3.7E-14 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 ProSitePatterns PS00502 Polygalacturonase active site. 422 436 - T 28-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SMART SM00710 333 355 60.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SMART SM00710 382 403 3000.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SMART SM00710 296 318 6400.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SMART SM00710 471 493 3800.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SMART SM00710 415 436 1400.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SUPERFAMILY SSF51126 144 553 1.13E-65 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 Pfam PF00295 Glycosyl hydrolases family 28 320 557 6.1E-26 T 28-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SUPERFAMILY SSF49265 95 149 9.08E-11 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SUPERFAMILY SSF49265 27 68 9.08E-11 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 DDI_RS18875 bcdfee74b96599ed1212bde707042171 605 SMART SM00060 33 137 2.1E-4 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 DDI_RS00250 ec89bd85b4d95e1e8aea817906f7dd37 188 Gene3D G3DSA:3.40.50.1000 1 188 2.9E-23 T 28-03-2018 IPR023214 HAD-like domain DDI_RS00250 ec89bd85b4d95e1e8aea817906f7dd37 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 95 158 3.4E-8 T 28-03-2018 IPR023214 HAD-like domain DDI_RS00250 ec89bd85b4d95e1e8aea817906f7dd37 188 SUPERFAMILY SSF56784 22 181 2.1E-40 T 28-03-2018 IPR023214 HAD-like domain DDI_RS00250 ec89bd85b4d95e1e8aea817906f7dd37 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 7.4E-68 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDI_RS00250 ec89bd85b4d95e1e8aea817906f7dd37 188 PIRSF PIRSF006118 13 188 1.4E-71 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDI_RS02985 8f91190540f2b3ac4c8aacea3985b45a 419 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 208 395 3.7E-6 T 28-03-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 Reactome: R-HSA-156588 DDI_RS02985 8f91190540f2b3ac4c8aacea3985b45a 419 SUPERFAMILY SSF53756 2 415 2.92E-67 T 28-03-2018 DDI_RS02985 8f91190540f2b3ac4c8aacea3985b45a 419 Gene3D G3DSA:3.40.50.2000 245 403 1.2E-29 T 28-03-2018 DDI_RS02985 8f91190540f2b3ac4c8aacea3985b45a 419 Gene3D G3DSA:3.40.50.2000 1 244 7.1E-29 T 28-03-2018 DDI_RS02985 8f91190540f2b3ac4c8aacea3985b45a 419 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 5 415 6.3E-34 T 28-03-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 PRINTS PR00050 Cold shock protein signature 7 22 8.2E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 PRINTS PR00050 Cold shock protein signature 43 61 8.2E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 PRINTS PR00050 Cold shock protein signature 28 37 8.2E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 6.1E-32 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 Gene3D G3DSA:2.40.50.140 1 70 7.5E-28 T 28-03-2018 DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 28-03-2018 IPR019844 Cold-shock conserved site DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 SMART SM00357 6 70 5.3E-30 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 SUPERFAMILY SSF50249 3 68 1.46E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS18555 2c0bc4fccd89ad6f310c60172c84e6ba 70 PIRSF PIRSF002599 1 70 2.6E-24 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 DDI_RS11475 24f473e7c978b07989415b364055f509 708 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 9.9E-63 T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS11475 24f473e7c978b07989415b364055f509 708 PIRSF PIRSF037618 1 705 1.1E-298 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS11475 24f473e7c978b07989415b364055f509 708 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS11475 24f473e7c978b07989415b364055f509 708 Gene3D G3DSA:3.40.50.150 160 389 6.9E-32 T 28-03-2018 DDI_RS11475 24f473e7c978b07989415b364055f509 708 Pfam PF02926 THUMP domain 22 153 7.8E-16 T 28-03-2018 IPR004114 THUMP domain GO:0003723 DDI_RS11475 24f473e7c978b07989415b364055f509 708 Gene3D G3DSA:3.40.50.150 494 704 7.2E-39 T 28-03-2018 DDI_RS11475 24f473e7c978b07989415b364055f509 708 Gene3D G3DSA:3.30.750.80 394 493 3.9E-8 T 28-03-2018 DDI_RS11475 24f473e7c978b07989415b364055f509 708 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 450 661 4.9E-23 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DDI_RS11475 24f473e7c978b07989415b364055f509 708 SMART SM00981 56 154 3.0E-20 T 28-03-2018 IPR004114 THUMP domain GO:0003723 DDI_RS11475 24f473e7c978b07989415b364055f509 708 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS11475 24f473e7c978b07989415b364055f509 708 SUPERFAMILY SSF53335 397 703 2.91E-67 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS11475 24f473e7c978b07989415b364055f509 708 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 704 32.506 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS11475 24f473e7c978b07989415b364055f509 708 SUPERFAMILY SSF53335 258 373 8.83E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS11475 24f473e7c978b07989415b364055f509 708 SUPERFAMILY SSF53335 146 217 8.83E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS04645 f8f0a14052fd6911abcb16db8fd014ea 369 Pfam PF01497 Periplasmic binding protein 79 311 8.7E-24 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 DDI_RS04645 f8f0a14052fd6911abcb16db8fd014ea 369 Gene3D G3DSA:3.40.50.1980 17 156 4.1E-22 T 28-03-2018 DDI_RS04645 f8f0a14052fd6911abcb16db8fd014ea 369 Gene3D G3DSA:3.40.50.1980 157 343 4.3E-39 T 28-03-2018 DDI_RS04645 f8f0a14052fd6911abcb16db8fd014ea 369 SUPERFAMILY SSF53807 23 361 2.67E-50 T 28-03-2018 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 Gene3D G3DSA:3.30.420.40 613 755 3.5E-27 T 28-03-2018 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 Gene3D G3DSA:3.30.70.100 2 100 1.3E-17 T 28-03-2018 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 Pfam PF07503 HypF finger 161 192 5.8E-15 T 28-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 Pfam PF07503 HypF finger 110 143 5.0E-15 T 28-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 PIRSF PIRSF006256 4 783 4.6E-270 T 28-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 Gene3D G3DSA:3.90.870.10 195 396 3.8E-53 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 SUPERFAMILY SSF55821 178 400 2.66E-48 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 Pfam PF00708 Acylphosphatase 10 92 4.2E-14 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 Pfam PF01300 Telomere recombination 212 388 5.1E-49 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 776 1.3E-253 T 28-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 DDI_RS12585 3a30272b91cb19c0a48e15b1b25d4057 784 SUPERFAMILY SSF54975 5 92 1.16E-17 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Pfam PF16353 Domain of unknown function(DUF4981) 648 736 9.9E-19 T 28-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Pfam PF00703 Glycosyl hydrolases family 2 228 343 1.6E-11 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 SUPERFAMILY SSF49303 228 343 4.03E-22 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 SMART SM01038 770 1043 9.3E-111 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 SUPERFAMILY SSF74650 758 1043 2.98E-92 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 345 637 6.8E-116 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 457 471 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 SUPERFAMILY SSF51445 344 633 8.38E-103 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 354 368 1.8E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 457 472 1.8E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 541 556 1.8E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 385 403 1.8E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 154 169 1.8E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Gene3D G3DSA:2.60.40.10 227 343 2.4E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Gene3D G3DSA:2.60.40.10 634 737 3.0E-22 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 395 420 - T 28-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Pfam PF02929 Beta galactosidase small chain 775 1042 1.3E-56 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 SUPERFAMILY SSF49303 631 740 3.64E-29 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Gene3D G3DSA:2.70.98.10 754 1045 4.0E-73 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 62 226 6.5E-65 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Gene3D G3DSA:2.60.120.260 11 226 6.0E-67 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Gene3D G3DSA:3.20.20.80 344 633 1.9E-88 T 28-03-2018 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 Hamap MF_01687 Beta-galactosidase [lacZ]. 13 1045 17.591 T 28-03-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS05795 85ddcba3c85b9b4d72153ae2eb24eb2b 1045 SUPERFAMILY SSF49785 22 226 1.19E-68 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS18210 1c7c57a5622c03c0cd2c31ab110bfe7d 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 329 1.2E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS18210 1c7c57a5622c03c0cd2c31ab110bfe7d 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 329 345 1.2E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS18210 1c7c57a5622c03c0cd2c31ab110bfe7d 347 SMART SM00342 263 345 3.2E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS18210 1c7c57a5622c03c0cd2c31ab110bfe7d 347 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 37 219 8.5E-47 T 28-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DDI_RS18210 1c7c57a5622c03c0cd2c31ab110bfe7d 347 Pfam PF12833 Helix-turn-helix domain 270 346 2.6E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS18210 1c7c57a5622c03c0cd2c31ab110bfe7d 347 Gene3D G3DSA:1.10.10.60 241 297 1.2E-6 T 28-03-2018 DDI_RS18210 1c7c57a5622c03c0cd2c31ab110bfe7d 347 Gene3D G3DSA:1.10.10.60 298 347 1.7E-15 T 28-03-2018 DDI_RS18210 1c7c57a5622c03c0cd2c31ab110bfe7d 347 SUPERFAMILY SSF46689 298 346 1.79E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS11660 f7906e524de71afdc288fbe79f4598b1 432 SUPERFAMILY SSF103473 12 430 2.35E-79 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS11660 f7906e524de71afdc288fbe79f4598b1 432 Pfam PF07690 Major Facilitator Superfamily 29 376 4.4E-54 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS11660 f7906e524de71afdc288fbe79f4598b1 432 Gene3D G3DSA:1.20.1250.20 12 214 6.6E-41 T 28-03-2018 DDI_RS11660 f7906e524de71afdc288fbe79f4598b1 432 PIRSF PIRSF002808 5 432 1.8E-34 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS11660 f7906e524de71afdc288fbe79f4598b1 432 Gene3D G3DSA:1.20.1250.20 229 432 2.9E-20 T 28-03-2018 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 SMART SM00562 3 140 4.3E-84 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 Gene3D G3DSA:3.30.70.141 1 140 9.4E-52 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.7E-55 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.2E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.2E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.2E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.2E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.2E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.301 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14040 a6ff8df9e0677092a76c4a6cd6fc3e2e 143 SUPERFAMILY SSF54919 1 140 1.11E-58 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 Pfam PF07702 UTRA domain 105 242 7.8E-37 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 Gene3D G3DSA:3.40.1410.10 93 247 5.6E-42 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 SUPERFAMILY SSF46785 17 88 3.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 SMART SM00866 105 242 2.8E-35 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 SUPERFAMILY SSF64288 72 245 2.2E-43 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 SMART SM00345 25 84 1.8E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 1.9E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 247 4.5E-104 T 28-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 DDI_RS13335 7bb8784b88c6e2abd3d9c2668ca694d7 247 Gene3D G3DSA:1.10.10.10 6 92 3.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.4E-106 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.304 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 SUPERFAMILY SSF51161 2 262 1.18E-77 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.4E-28 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 Gene3D G3DSA:1.20.1180.10 197 262 5.4E-24 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 PIRSF PIRSF000456 5 262 7.1E-105 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 Gene3D G3DSA:2.160.10.10 1 196 2.1E-41 T 28-03-2018 DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 3.5E-8 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS03785 b56d40ebc810479a466ccf58988af475 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 3.0E-9 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 PIRSF PIRSF000478 1 438 6.7E-152 T 28-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 1.4E-48 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 6.2E-225 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 421 7.6E-21 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 Gene3D G3DSA:3.40.1030.10 69 341 8.3E-83 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 28-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 SUPERFAMILY SSF52418 75 333 5.1E-89 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 SUPERFAMILY SSF54680 337 438 6.15E-29 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 Gene3D G3DSA:1.20.970.10 3 67 4.8E-22 T 28-03-2018 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 421 4.0E-164 T 28-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 46.237 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 Gene3D G3DSA:3.90.1170.30 342 429 1.1E-25 T 28-03-2018 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 7.7E-20 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 SUPERFAMILY SSF47648 3 70 8.5E-22 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS02215 87193529233a81d55caa0d22b862bd61 443 SMART SM00941 350 424 1.5E-25 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS11525 0bdae99960819e5937ccd11737fe6130 401 PIRSF PIRSF000484 1 383 2.0E-63 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DDI_RS11525 0bdae99960819e5937ccd11737fe6130 401 Gene3D G3DSA:3.20.140.10 1 401 1.2E-108 T 28-03-2018 DDI_RS11525 0bdae99960819e5937ccd11737fe6130 401 SUPERFAMILY SSF51690 120 393 6.28E-86 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DDI_RS11525 0bdae99960819e5937ccd11737fe6130 401 SUPERFAMILY SSF54675 2 137 8.24E-46 T 28-03-2018 DDI_RS11525 0bdae99960819e5937ccd11737fe6130 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 395 7.3E-81 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DDI_RS11525 0bdae99960819e5937ccd11737fe6130 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 3.0E-165 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DDI_RS11525 0bdae99960819e5937ccd11737fe6130 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.886 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DDI_RS16740 f64a74dc001c5730f050499cd20c2214 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.2E-36 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 DDI_RS16740 f64a74dc001c5730f050499cd20c2214 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS16740 f64a74dc001c5730f050499cd20c2214 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.933 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS16740 f64a74dc001c5730f050499cd20c2214 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS16740 f64a74dc001c5730f050499cd20c2214 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS16740 f64a74dc001c5730f050499cd20c2214 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 4.2E-159 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS03500 a7565252b68f313dca5b6f5ff6762f49 485 ProSitePatterns PS00218 Amino acid permeases signature. 57 87 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DDI_RS03500 a7565252b68f313dca5b6f5ff6762f49 485 Pfam PF00324 Amino acid permease 33 473 2.5E-118 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 DDI_RS03500 a7565252b68f313dca5b6f5ff6762f49 485 PIRSF PIRSF006060 20 485 9.9E-66 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS03500 a7565252b68f313dca5b6f5ff6762f49 485 Gene3D G3DSA:1.10.287.70 56 385 0.0029 T 28-03-2018 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 SUPERFAMILY SSF53187 179 495 9.42E-124 T 28-03-2018 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 Gene3D G3DSA:3.40.630.10 170 499 4.5E-134 T 28-03-2018 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 SUPERFAMILY SSF52949 1 184 2.83E-50 T 28-03-2018 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.7E-33 T 28-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 488 3.2E-122 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 Gene3D G3DSA:3.40.220.10 1 154 1.7E-29 T 28-03-2018 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 5.8E-52 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 5.8E-52 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 5.8E-52 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 5.8E-52 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 5.8E-52 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDI_RS00785 99bfea2a001ea3717fec0c9105c88fe0 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.645 T 28-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Pfam PF00679 Elongation factor G C-terminus 611 696 8.1E-29 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Gene3D G3DSA:2.40.30.10 294 406 1.9E-30 T 28-03-2018 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-33 T 28-03-2018 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 SUPERFAMILY SSF54980 611 700 2.95E-27 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS18120 3312c5edd51318f1453377738e002ece 704 SUPERFAMILY SSF52540 6 287 3.26E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 4.0E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 SMART SM00889 487 609 2.2E-70 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 SUPERFAMILY SSF54211 486 610 3.54E-39 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Gene3D G3DSA:3.30.230.10 501 624 9.0E-40 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Pfam PF03764 Elongation factor G, domain IV 486 609 1.6E-44 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site DDI_RS18120 3312c5edd51318f1453377738e002ece 704 SMART SM00838 611 698 2.2E-50 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Gene3D G3DSA:3.40.50.300 1 293 1.6E-57 T 28-03-2018 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Gene3D G3DSA:3.30.70.870 407 500 1.9E-36 T 28-03-2018 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Gene3D G3DSA:3.30.70.240 625 702 7.2E-29 T 28-03-2018 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 3.1E-67 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 111.687 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 4.8E-32 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS18120 3312c5edd51318f1453377738e002ece 704 SUPERFAMILY SSF50447 271 411 1.79E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS08460 adfcf3f7626fa0641638625e7fe2d693 139 Gene3D G3DSA:3.40.1440.10 9 134 6.6E-5 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily DDI_RS09530 6f1860eadaddbb0b6e60ad8bb7d2b90d 311 Pfam PF03756 A-factor biosynthesis hotdog domain 18 128 1.3E-13 T 28-03-2018 IPR005509 A-factor biosynthesis hotdog domain DDI_RS20110 a5139f5b7e8be1368d70c3e3a160e8bd 385 Gene3D G3DSA:3.40.47.10 235 385 2.4E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20110 a5139f5b7e8be1368d70c3e3a160e8bd 385 SUPERFAMILY SSF53901 198 383 4.92E-46 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20110 a5139f5b7e8be1368d70c3e3a160e8bd 385 SMART SM00825 Beta-ketoacyl synthase 25 385 3.1E-9 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS20110 a5139f5b7e8be1368d70c3e3a160e8bd 385 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 64 223 2.4E-21 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS20110 a5139f5b7e8be1368d70c3e3a160e8bd 385 Gene3D G3DSA:3.40.47.10 1 230 1.5E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20110 a5139f5b7e8be1368d70c3e3a160e8bd 385 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 230 330 2.0E-24 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS20110 a5139f5b7e8be1368d70c3e3a160e8bd 385 SUPERFAMILY SSF53901 2 229 1.78E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20110 a5139f5b7e8be1368d70c3e3a160e8bd 385 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 142 158 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 512 7.8E-28 T 28-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 Pfam PF13188 PAS domain 83 131 4.9E-4 T 28-03-2018 IPR000014 PAS domain DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 418 427 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 Gene3D G3DSA:1.10.8.60 378 457 1.9E-17 T 28-03-2018 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 Gene3D G3DSA:3.30.450.20 83 186 7.2E-9 T 28-03-2018 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 SUPERFAMILY SSF52540 205 446 5.53E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 SUPERFAMILY SSF55021 2 69 4.07E-5 T 28-03-2018 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 Gene3D G3DSA:3.30.70.260 1 82 9.8E-10 T 28-03-2018 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 SUPERFAMILY SSF55785 82 174 1.01E-7 T 28-03-2018 IPR000014 PAS domain DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 SMART SM00091 80 146 3.4E-4 T 28-03-2018 IPR000014 PAS domain DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 SMART SM00382 225 369 1.3E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 Gene3D G3DSA:3.40.50.300 200 377 1.9E-21 T 28-03-2018 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 Pfam PF00158 Sigma-54 interaction domain 206 371 2.3E-60 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 Gene3D G3DSA:1.10.10.60 458 513 5.0E-7 T 28-03-2018 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 291 306 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS11015 9a25ae6d2f0e3c976d178eab92d6e326 521 SUPERFAMILY SSF46689 457 512 7.17E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS04390 bfc5b2aa83ae43b0689a3e06e62c467b 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 377 2.0E-87 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS04390 bfc5b2aa83ae43b0689a3e06e62c467b 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 295 2.9E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS04390 bfc5b2aa83ae43b0689a3e06e62c467b 397 Gene3D G3DSA:1.20.1600.10 28 393 1.3E-37 T 28-03-2018 DDI_RS04390 bfc5b2aa83ae43b0689a3e06e62c467b 397 SUPERFAMILY SSF111369 55 302 2.35E-89 T 28-03-2018 DDI_RS04390 bfc5b2aa83ae43b0689a3e06e62c467b 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 104 362 7.9E-9 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 Gene3D G3DSA:1.20.120.30 20 188 2.3E-6 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 SUPERFAMILY SSF58104 248 518 1.31E-56 T 28-03-2018 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 484 1.9E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 SMART SM00283 270 517 8.4E-61 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 Gene3D G3DSA:1.10.287.950 309 521 8.5E-46 T 28-03-2018 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 1.2E-32 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 1.2E-32 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 1.2E-32 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 1.2E-32 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16565 6a8eda83631235a72d9a8c1e10049371 547 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 185 1.0E-14 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 Gene3D G3DSA:3.30.70.1430 54 156 4.3E-24 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 Gene3D G3DSA:3.30.70.1430 572 671 2.3E-13 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 Gene3D G3DSA:1.20.1640.10 820 1041 1.9E-35 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 Gene3D G3DSA:3.30.2090.10 195 280 2.3E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 SUPERFAMILY SSF82866 304 503 4.71E-45 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 SUPERFAMILY SSF82693 570 667 5.23E-16 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 SUPERFAMILY SSF82693 151 196 9.07E-21 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 SUPERFAMILY SSF82693 282 338 9.07E-21 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 SUPERFAMILY SSF82693 54 148 4.29E-23 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 SUPERFAMILY SSF82714 724 806 2.75E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 Pfam PF00873 AcrB/AcrD/AcrF family 18 1027 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 344 367 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 399 423 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 371 392 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 5.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 Gene3D G3DSA:3.30.2090.10 721 808 2.3E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 7 1042 32.998 T 28-03-2018 IPR022831 Multidrug resistance protein MdtB DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 SUPERFAMILY SSF82714 197 279 5.1E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 Gene3D G3DSA:1.20.1640.10 281 506 2.0E-44 T 28-03-2018 DDI_RS13635 e91e90aae0156001273a6754eb3dcf20 1045 SUPERFAMILY SSF82866 805 1030 5.23E-43 T 28-03-2018 DDI_RS09505 a1c5f4bb22b36f6501b56781dfeeeba2 168 Gene3D G3DSA:2.40.128.20 10 162 2.0E-57 T 28-03-2018 IPR012674 Calycin DDI_RS09505 a1c5f4bb22b36f6501b56781dfeeeba2 168 SUPERFAMILY SSF50814 4 167 8.3E-71 T 28-03-2018 IPR012674 Calycin DDI_RS09505 a1c5f4bb22b36f6501b56781dfeeeba2 168 Pfam PF05870 Phenolic acid decarboxylase (PAD) 9 165 9.1E-85 T 28-03-2018 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 DDI_RS09505 a1c5f4bb22b36f6501b56781dfeeeba2 168 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 9 153 4.0E-71 T 28-03-2018 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 DDI_RS19865 d55adff2f0d1fbd94ecc7f56567aae91 191 SUPERFAMILY SSF53448 1 182 3.64E-37 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS19865 d55adff2f0d1fbd94ecc7f56567aae91 191 Gene3D G3DSA:3.90.550.10 1 190 5.4E-35 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS19865 d55adff2f0d1fbd94ecc7f56567aae91 191 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 185 29.196 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DDI_RS19865 d55adff2f0d1fbd94ecc7f56567aae91 191 Pfam PF12804 MobA-like NTP transferase domain 4 157 4.4E-36 T 28-03-2018 IPR025877 MobA-like NTP transferase DDI_RS19865 d55adff2f0d1fbd94ecc7f56567aae91 191 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 2 183 6.7E-71 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DDI_RS09870 a8b500455c1656936b2e69459a89b42f 278 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 276 2.2E-111 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DDI_RS09870 a8b500455c1656936b2e69459a89b42f 278 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 276 3.7E-142 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 SUPERFAMILY SSF46785 1 86 2.52E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 SUPERFAMILY SSF53850 89 294 4.83E-35 T 28-03-2018 DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 Gene3D G3DSA:3.40.190.10 85 180 1.4E-17 T 28-03-2018 DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 Gene3D G3DSA:3.40.190.10 181 268 3.3E-10 T 28-03-2018 DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 Pfam PF03466 LysR substrate binding domain 87 294 8.8E-40 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.3E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS18910 fc6459e8a59173b8bc2fca3db781dc9c 295 Gene3D G3DSA:1.10.10.10 1 83 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 Pfam PF00376 MerR family regulatory protein 2 39 5.3E-17 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 SMART SM00422 1 70 5.1E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 SUPERFAMILY SSF46955 1 123 2.49E-33 T 28-03-2018 IPR009061 Putative DNA-binding domain DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 Pfam PF09278 MerR, DNA binding 44 107 6.2E-20 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.7E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.7E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.7E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 Gene3D G3DSA:1.10.1660.10 57 136 9.9E-19 T 28-03-2018 DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 1.2E-51 T 28-03-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 DDI_RS01425 25ad59598b0fc5e2e1fb2d99a13bfcb4 143 Gene3D G3DSA:1.10.1660.10 1 56 4.6E-21 T 28-03-2018 DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 PIRSF PIRSF002599 1 73 5.4E-22 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.8E-28 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 Gene3D G3DSA:2.40.50.140 1 73 3.2E-26 T 28-03-2018 DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.3E-41 T 28-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 28-03-2018 IPR019844 Cold-shock conserved site DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 SUPERFAMILY SSF50249 1 65 8.14E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 SMART SM00357 3 67 5.8E-28 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 PRINTS PR00050 Cold shock protein signature 4 19 7.8E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 PRINTS PR00050 Cold shock protein signature 25 34 7.8E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS08055 5808368ca1ed813ae7cf3ebf717c13ea 73 PRINTS PR00050 Cold shock protein signature 40 58 7.8E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS03585 5cb0518ee30879fa0fbd8d42548cace5 163 SUPERFAMILY SSF54523 11 139 1.41E-10 T 28-03-2018 DDI_RS03585 5cb0518ee30879fa0fbd8d42548cace5 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 1.1E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS03585 5cb0518ee30879fa0fbd8d42548cace5 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 2.5E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS03585 5cb0518ee30879fa0fbd8d42548cace5 163 Gene3D G3DSA:3.30.700.10 11 145 9.8E-5 T 28-03-2018 DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 28-03-2018 DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 Gene3D G3DSA:3.40.50.2300 184 325 1.9E-41 T 28-03-2018 DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 Pfam PF13377 Periplasmic binding protein-like domain 176 337 6.8E-38 T 28-03-2018 DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 SUPERFAMILY SSF47413 9 67 6.47E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 SMART SM00354 9 79 1.6E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 Gene3D G3DSA:3.40.50.2300 64 183 8.9E-31 T 28-03-2018 DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 Gene3D G3DSA:1.10.260.40 25 63 1.0E-18 T 28-03-2018 DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 SUPERFAMILY SSF53822 68 341 2.16E-86 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 Gene3D G3DSA:1.10.10.10 7 24 0.014 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19085 c99c11391135229b85a568d6bcdc3399 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 1.3E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS00275 1104043d522682a6b903bab2d463e58a 204 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 3.0E-54 T 28-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 DDI_RS00275 1104043d522682a6b903bab2d463e58a 204 Pfam PF02470 MlaD protein 38 115 1.5E-19 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS16770 0905473dafabb5996898e0860c3d6f42 152 SUPERFAMILY SSF89447 1 137 1.08E-44 T 28-03-2018 DDI_RS16770 0905473dafabb5996898e0860c3d6f42 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 1.6E-62 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DDI_RS16770 0905473dafabb5996898e0860c3d6f42 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 3.3E-22 T 28-03-2018 IPR020603 MraZ domain DDI_RS16770 0905473dafabb5996898e0860c3d6f42 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 140 4.1E-21 T 28-03-2018 IPR020603 MraZ domain DDI_RS16770 0905473dafabb5996898e0860c3d6f42 152 Gene3D G3DSA:2.10.260.10 3 59 0.037 T 28-03-2018 DDI_RS16770 0905473dafabb5996898e0860c3d6f42 152 Gene3D G3DSA:2.10.260.10 81 130 8.8E-5 T 28-03-2018 DDI_RS16770 0905473dafabb5996898e0860c3d6f42 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.909 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DDI_RS16770 0905473dafabb5996898e0860c3d6f42 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 3.0E-69 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.5E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.5E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 Gene3D G3DSA:3.40.50.2300 180 317 1.5E-41 T 28-03-2018 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 SMART SM00354 1 72 6.1E-13 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 Gene3D G3DSA:1.10.260.40 1 67 8.0E-18 T 28-03-2018 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 SUPERFAMILY SSF53822 73 340 1.78E-51 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 SUPERFAMILY SSF47413 1 48 1.97E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 Gene3D G3DSA:3.40.50.2300 72 179 3.3E-18 T 28-03-2018 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 Pfam PF13377 Periplasmic binding protein-like domain 174 340 2.0E-32 T 28-03-2018 DDI_RS16455 48b2980ca18e4d68d22116a80e0755d9 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 45 7.4E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.3E-25 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 155 4.0E-75 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 Gene3D G3DSA:1.10.287.180 3 75 3.8E-27 T 28-03-2018 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 PIRSF PIRSF006092 1 157 7.4E-44 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 52.693 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 SUPERFAMILY SSF46557 4 78 6.67E-26 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 26.772 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 2.0E-21 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 Gene3D G3DSA:3.10.50.30 76 163 1.4E-22 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DDI_RS18460 2c87be41d74518558d1c4ecc87f0e384 172 SUPERFAMILY SSF54534 80 155 2.35E-19 T 28-03-2018 DDI_RS20675 d5a21d321654fc1454b21f5286fc5c13 297 Pfam PF03824 High-affinity nickel-transport protein 15 293 1.6E-54 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 Gene3D G3DSA:3.40.1190.20 1 308 2.9E-81 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.007 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 3.1E-109 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 PRINTS PR00990 Ribokinase signature 107 120 4.5E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 PRINTS PR00990 Ribokinase signature 219 230 4.5E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 PRINTS PR00990 Ribokinase signature 35 54 4.5E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 PRINTS PR00990 Ribokinase signature 175 190 4.5E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 PRINTS PR00990 Ribokinase signature 8 29 4.5E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 SUPERFAMILY SSF53613 5 304 7.64E-83 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS19905 649cc3f969f5b8417cc672831cb07894 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 2.7E-72 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 8.0E-13 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.122 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 SUPERFAMILY SSF52540 96 381 3.63E-95 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 505 5.8E-45 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 4.7E-260 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 SUPERFAMILY SSF47917 383 511 1.41E-44 T 28-03-2018 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 Gene3D G3DSA:1.20.150.20 384 510 1.2E-45 T 28-03-2018 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 Gene3D G3DSA:3.40.50.300 83 375 5.5E-113 T 28-03-2018 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.1E-73 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 Gene3D G3DSA:2.40.30.20 3 82 1.3E-27 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20005 bd80f9998c97ffb1be367ad5321c5da5 513 SUPERFAMILY SSF50615 10 94 1.49E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS07285 3bec8a7a25d6f41839bcb1b12bef5449 179 Pfam PF01928 CYTH domain 9 173 2.3E-21 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DDI_RS07285 3bec8a7a25d6f41839bcb1b12bef5449 179 Gene3D G3DSA:2.40.320.10 1 179 1.8E-27 T 28-03-2018 DDI_RS07285 3bec8a7a25d6f41839bcb1b12bef5449 179 SUPERFAMILY SSF55154 9 177 7.03E-35 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 DDI_RS07285 3bec8a7a25d6f41839bcb1b12bef5449 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 10 146 2.0E-11 T 28-03-2018 DDI_RS07285 3bec8a7a25d6f41839bcb1b12bef5449 179 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 9 177 2.1E-17 T 28-03-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 DDI_RS07285 3bec8a7a25d6f41839bcb1b12bef5449 179 SMART SM01118 8 179 8.5E-11 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DDI_RS04255 572f0385d1f113e258b7020c8af3c4b7 316 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 8.9E-120 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DDI_RS04255 572f0385d1f113e258b7020c8af3c4b7 316 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 218 9.8E-5 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04255 572f0385d1f113e258b7020c8af3c4b7 316 Gene3D G3DSA:2.60.40.420 114 281 1.9E-51 T 28-03-2018 IPR008972 Cupredoxin DDI_RS04255 572f0385d1f113e258b7020c8af3c4b7 316 SUPERFAMILY SSF49503 119 281 5.98E-52 T 28-03-2018 IPR008972 Cupredoxin DDI_RS04255 572f0385d1f113e258b7020c8af3c4b7 316 Gene3D G3DSA:1.10.287.90 28 113 7.6E-20 T 28-03-2018 DDI_RS04255 572f0385d1f113e258b7020c8af3c4b7 316 PIRSF PIRSF000292 1 313 2.6E-134 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DDI_RS04255 572f0385d1f113e258b7020c8af3c4b7 316 SUPERFAMILY SSF81464 18 117 4.09E-24 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04255 572f0385d1f113e258b7020c8af3c4b7 316 Pfam PF06481 COX Aromatic Rich Motif 239 284 2.0E-17 T 28-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 DDI_RS19150 6ca837f533c402b5c17a3541025faaff 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.913 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS19150 6ca837f533c402b5c17a3541025faaff 256 Gene3D G3DSA:3.20.20.70 1 255 2.6E-103 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS19150 6ca837f533c402b5c17a3541025faaff 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS19150 6ca837f533c402b5c17a3541025faaff 256 Pfam PF00121 Triosephosphate isomerase 5 246 1.6E-94 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS19150 6ca837f533c402b5c17a3541025faaff 256 SUPERFAMILY SSF51351 1 250 4.71E-92 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS19150 6ca837f533c402b5c17a3541025faaff 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 6.5E-96 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS12650 9ae1a16c62956e6db22fde23668d9fc1 293 PIRSF PIRSF016184 3 293 5.2E-74 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DDI_RS12650 9ae1a16c62956e6db22fde23668d9fc1 293 Pfam PF02567 Phenazine biosynthesis-like protein 10 271 1.4E-53 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DDI_RS12650 9ae1a16c62956e6db22fde23668d9fc1 293 SUPERFAMILY SSF54506 5 293 1.92E-72 T 28-03-2018 DDI_RS12650 9ae1a16c62956e6db22fde23668d9fc1 293 Gene3D G3DSA:3.10.310.10 1 130 7.0E-33 T 28-03-2018 DDI_RS12650 9ae1a16c62956e6db22fde23668d9fc1 293 Gene3D G3DSA:3.10.310.10 131 282 3.0E-27 T 28-03-2018 DDI_RS12650 9ae1a16c62956e6db22fde23668d9fc1 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 290 7.6E-60 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DDI_RS00995 048c7fb17380969c00a57fe831944172 311 Pfam PF13407 Periplasmic binding protein domain 29 279 4.2E-51 T 28-03-2018 IPR025997 Periplasmic binding protein DDI_RS00995 048c7fb17380969c00a57fe831944172 311 Gene3D G3DSA:3.40.50.2300 142 306 3.0E-30 T 28-03-2018 DDI_RS00995 048c7fb17380969c00a57fe831944172 311 SUPERFAMILY SSF53822 25 303 4.88E-68 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS00995 048c7fb17380969c00a57fe831944172 311 Gene3D G3DSA:3.40.50.2300 19 141 5.1E-25 T 28-03-2018 DDI_RS15645 3e960262ea5a80ce509e40f2c9d33f30 115 Gene3D G3DSA:3.10.490.10 1 115 8.2E-26 T 28-03-2018 DDI_RS15645 3e960262ea5a80ce509e40f2c9d33f30 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.5E-22 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like DDI_RS15645 3e960262ea5a80ce509e40f2c9d33f30 115 SUPERFAMILY SSF110857 1 112 3.53E-32 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like DDI_RS09580 393ca55905a6068416833ce1c47fd66d 462 SUPERFAMILY SSF52467 289 462 3.01E-77 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS09580 393ca55905a6068416833ce1c47fd66d 462 Gene3D G3DSA:3.40.50.1220 289 462 5.5E-91 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS09580 393ca55905a6068416833ce1c47fd66d 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 3.2E-203 T 28-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DDI_RS09580 393ca55905a6068416833ce1c47fd66d 462 PIRSF PIRSF000204 1 462 1.2E-234 T 28-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 Gene3D G3DSA:2.60.120.280 5 166 1.6E-16 T 28-03-2018 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 Pfam PF12833 Helix-turn-helix domain 199 277 1.9E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 SUPERFAMILY SSF46689 228 279 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 SMART SM00342 192 275 1.4E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 Gene3D G3DSA:1.10.10.60 171 227 2.0E-10 T 28-03-2018 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 6.0E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 6.0E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 2 282 49.488 T 28-03-2018 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 Pfam PF02311 AraC-like ligand binding domain 24 128 2.4E-12 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 SUPERFAMILY SSF46689 176 227 4.48E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 Gene3D G3DSA:1.10.10.60 228 283 3.2E-16 T 28-03-2018 DDI_RS01140 318e6707ea0fa358444527a3e6af70b9 284 SUPERFAMILY SSF51182 31 149 8.89E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS04270 bca0f960846458b3f71d37b8431637ec 104 Pfam PF01722 BolA-like protein 10 83 1.5E-28 T 28-03-2018 IPR002634 BolA protein DDI_RS04270 bca0f960846458b3f71d37b8431637ec 104 Gene3D G3DSA:3.30.300.90 1 90 1.0E-28 T 28-03-2018 DDI_RS04270 bca0f960846458b3f71d37b8431637ec 104 PIRSF PIRSF003113 1 99 1.8E-32 T 28-03-2018 IPR002634 BolA protein DDI_RS04270 bca0f960846458b3f71d37b8431637ec 104 SUPERFAMILY SSF82657 1 87 3.66E-30 T 28-03-2018 IPR002634 BolA protein DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 Gene3D G3DSA:1.10.420.10 228 394 8.5E-42 T 28-03-2018 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 Gene3D G3DSA:1.10.420.10 597 708 8.1E-36 T 28-03-2018 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 Gene3D G3DSA:1.10.520.10 55 210 7.8E-37 T 28-03-2018 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 Gene3D G3DSA:1.10.520.10 439 596 2.5E-35 T 28-03-2018 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 SUPERFAMILY SSF48113 21 425 3.24E-157 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 254 264 - T 28-03-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 4.6E-56 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 477 503 4.6E-56 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 262 285 4.6E-56 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 4.6E-56 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 4.6E-56 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 7.7E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00458 Haem peroxidase superfamily signature 313 328 7.7E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00458 Haem peroxidase superfamily signature 254 269 7.7E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 7.7E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 7.7E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 SUPERFAMILY SSF48113 427 732 3.24E-116 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 Hamap MF_01961 Catalase-peroxidase [katG]. 2 733 43.15 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 732 0.0 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 Pfam PF00141 Peroxidase 399 705 1.6E-39 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 Pfam PF00141 Peroxidase 76 393 3.9E-49 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DDI_RS06735 cce430a0fee7a668fd38a17877d5e12c 733 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 28-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 SMART SM00387 355 462 8.4E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 SMART SM00388 244 309 8.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 Pfam PF08521 Two-component sensor kinase N-terminal 19 165 8.5E-45 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 SMART SM00304 191 243 1.6E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 Gene3D G3DSA:1.20.5.1040 5 57 9.6E-7 T 28-03-2018 DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 SUPERFAMILY SSF47384 227 308 1.65E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 Gene3D G3DSA:1.10.287.130 234 305 1.1E-6 T 28-03-2018 DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 SUPERFAMILY SSF55874 300 450 6.02E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 455 3.9E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 Pfam PF00672 HAMP domain 191 239 5.4E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12870 93548207e7e4d8d2bd2f4a3969f6743e 463 Gene3D G3DSA:3.30.565.10 316 459 8.6E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS15695 4bc53eb279dce7711262a6af7a14771c 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 1.6E-78 T 28-03-2018 IPR019903 Repair of iron centres family DDI_RS15695 4bc53eb279dce7711262a6af7a14771c 221 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 221 49.398 T 28-03-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 DDI_RS15695 4bc53eb279dce7711262a6af7a14771c 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 56 6.9E-18 T 28-03-2018 IPR019903 Repair of iron centres family DDI_RS15695 4bc53eb279dce7711262a6af7a14771c 221 Gene3D G3DSA:1.10.3910.10 3 61 4.5E-8 T 28-03-2018 DDI_RS15695 4bc53eb279dce7711262a6af7a14771c 221 Pfam PF01814 Hemerythrin HHE cation binding domain 79 217 1.4E-25 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DDI_RS15695 4bc53eb279dce7711262a6af7a14771c 221 Gene3D G3DSA:1.20.120.520 62 220 8.4E-32 T 28-03-2018 DDI_RS10840 95b2528eac33e38fcea3df5cd493e81f 346 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 346 2.0E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10840 95b2528eac33e38fcea3df5cd493e81f 346 SUPERFAMILY SSF161098 104 172 2.35E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10840 95b2528eac33e38fcea3df5cd493e81f 346 SUPERFAMILY SSF161098 210 332 2.35E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10840 95b2528eac33e38fcea3df5cd493e81f 346 Gene3D G3DSA:1.10.3720.10 10 335 1.5E-40 T 28-03-2018 DDI_RS19570 cef7f3ed1bc05bd63a5d58c789099c4c 447 SUPERFAMILY SSF103473 15 443 2.49E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS19570 cef7f3ed1bc05bd63a5d58c789099c4c 447 Gene3D G3DSA:1.20.1250.20 8 229 2.1E-23 T 28-03-2018 DDI_RS19570 cef7f3ed1bc05bd63a5d58c789099c4c 447 Gene3D G3DSA:1.20.1250.20 230 447 1.8E-23 T 28-03-2018 DDI_RS19570 cef7f3ed1bc05bd63a5d58c789099c4c 447 Pfam PF00083 Sugar (and other) transporter 28 442 2.6E-31 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 SUPERFAMILY SSF50486 206 307 6.28E-36 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 Pfam PF02911 Formyl transferase, C-terminal domain 205 302 3.3E-32 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 SUPERFAMILY SSF53328 2 205 6.15E-68 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 Gene3D G3DSA:3.40.50.170 1 207 1.3E-69 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 308 1.1E-115 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 305 37.249 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 Gene3D G3DSA:3.10.25.10 208 311 4.1E-32 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS17935 a5e850dbbdba1eae781e130ba4563ceb 313 Pfam PF00551 Formyl transferase 4 181 2.3E-53 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 SMART SM01061 1 59 1.3E-25 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 SUPERFAMILY SSF63520 59 166 1.06E-29 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 SUPERFAMILY SSF63520 171 273 1.44E-26 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 SUPERFAMILY SSF50151 1 53 2.75E-16 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 Gene3D G3DSA:2.30.24.10 1 55 8.8E-22 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 ProSitePatterns PS00654 PRD domain signature. 98 110 - T 28-03-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 Pfam PF00874 PRD domain 76 163 1.3E-23 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 Pfam PF00874 PRD domain 180 272 3.0E-19 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 Gene3D G3DSA:1.10.1790.10 56 164 6.6E-26 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 Gene3D G3DSA:1.10.1790.10 165 277 1.8E-23 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS11365 297a81d9262868f5b80b5717c660386c 283 Pfam PF03123 CAT RNA binding domain 1 54 1.4E-21 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 DDI_RS05400 06ac1730a2f136b9e8eb8110143cd434 284 Gene3D G3DSA:3.40.50.720 1 170 3.1E-21 T 28-03-2018 DDI_RS05400 06ac1730a2f136b9e8eb8110143cd434 284 Pfam PF04321 RmlD substrate binding domain 1 283 2.0E-103 T 28-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DDI_RS05400 06ac1730a2f136b9e8eb8110143cd434 284 Gene3D G3DSA:3.90.25.10 171 195 2.9E-10 T 28-03-2018 DDI_RS05400 06ac1730a2f136b9e8eb8110143cd434 284 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 283 1.1E-103 T 28-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DDI_RS05400 06ac1730a2f136b9e8eb8110143cd434 284 SUPERFAMILY SSF51735 1 282 2.71E-98 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05400 06ac1730a2f136b9e8eb8110143cd434 284 Gene3D G3DSA:3.90.25.10 196 271 1.5E-22 T 28-03-2018 DDI_RS05400 06ac1730a2f136b9e8eb8110143cd434 284 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 126 134 - T 28-03-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 DDI_RS18440 2bacc37ac91e10ea4f17fa99f448f0d0 290 SUPERFAMILY SSF118352 224 282 2.09E-19 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DDI_RS18440 2bacc37ac91e10ea4f17fa99f448f0d0 290 Gene3D G3DSA:1.10.287.480 181 225 4.0E-19 T 28-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain DDI_RS18440 2bacc37ac91e10ea4f17fa99f448f0d0 290 Gene3D G3DSA:3.55.30.10 1 176 1.3E-64 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DDI_RS18440 2bacc37ac91e10ea4f17fa99f448f0d0 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 32.989 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DDI_RS18440 2bacc37ac91e10ea4f17fa99f448f0d0 290 Pfam PF01430 Hsp33 protein 5 273 4.2E-85 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DDI_RS18440 2bacc37ac91e10ea4f17fa99f448f0d0 290 Gene3D G3DSA:3.90.1280.10 226 281 1.1E-21 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DDI_RS18440 2bacc37ac91e10ea4f17fa99f448f0d0 290 SUPERFAMILY SSF64397 4 232 7.85E-78 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DDI_RS18440 2bacc37ac91e10ea4f17fa99f448f0d0 290 PIRSF PIRSF005261 1 285 6.1E-74 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DDI_RS00610 eefbd20caac0b5cae893fecc4bc91487 513 Gene3D G3DSA:3.40.190.10 167 290 4.4E-23 T 28-03-2018 DDI_RS00610 eefbd20caac0b5cae893fecc4bc91487 513 PIRSF PIRSF002741 2 511 3.4E-63 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS00610 eefbd20caac0b5cae893fecc4bc91487 513 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 419 2.0E-65 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS00610 eefbd20caac0b5cae893fecc4bc91487 513 Gene3D G3DSA:3.90.76.10 66 166 1.1E-27 T 28-03-2018 DDI_RS00610 eefbd20caac0b5cae893fecc4bc91487 513 Gene3D G3DSA:3.10.105.10 291 482 1.5E-35 T 28-03-2018 DDI_RS00610 eefbd20caac0b5cae893fecc4bc91487 513 SUPERFAMILY SSF53850 36 496 1.22E-109 T 28-03-2018 DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 Pfam PF02589 LUD domain 72 294 1.3E-53 T 28-03-2018 IPR003741 LUD domain DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 Gene3D G3DSA:3.40.50.10420 64 137 1.1E-6 T 28-03-2018 DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 Gene3D G3DSA:3.40.50.10420 138 295 2.4E-47 T 28-03-2018 DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 Pfam PF13183 4Fe-4S dicluster domain 309 376 1.7E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 Pfam PF11870 Domain of unknown function (DUF3390) 391 468 1.9E-9 T 28-03-2018 IPR024569 4Fe-4S binding protein, C-terminal DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 Gene3D G3DSA:1.10.1060.10 297 398 5.4E-15 T 28-03-2018 DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 362 373 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 453 5.5E-207 T 28-03-2018 IPR004452 4Fe-4S binding protein GO:0019516 DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 SUPERFAMILY SSF46548 281 392 1.92E-19 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 SUPERFAMILY SSF100950 65 89 1.05E-41 T 28-03-2018 DDI_RS06705 984cadc3b18227a9a772bc40de6055b0 475 SUPERFAMILY SSF100950 135 295 1.05E-41 T 28-03-2018 DDI_RS11945 0111ba2172026d6c5976caa673bb37b2 377 SUPERFAMILY SSF55347 144 324 2.29E-24 T 28-03-2018 DDI_RS11945 0111ba2172026d6c5976caa673bb37b2 377 SUPERFAMILY SSF51735 8 167 2.51E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS11945 0111ba2172026d6c5976caa673bb37b2 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 138 2.7E-18 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDI_RS11945 0111ba2172026d6c5976caa673bb37b2 377 Gene3D G3DSA:3.40.50.720 1 156 3.4E-25 T 28-03-2018 DDI_RS11945 0111ba2172026d6c5976caa673bb37b2 377 Gene3D G3DSA:3.30.360.10 157 377 3.3E-28 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SUPERFAMILY SSF50249 362 444 1.31E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Gene3D G3DSA:2.40.50.140 95 177 1.3E-7 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Gene3D G3DSA:2.40.50.140 182 266 2.5E-26 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Gene3D G3DSA:2.40.50.140 1 92 1.1E-7 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SUPERFAMILY SSF50249 429 537 2.83E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PIRSF PIRSF002111 1 534 2.4E-219 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Gene3D G3DSA:2.40.50.140 451 550 2.5E-19 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.1E-99 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Pfam PF00575 S1 RNA binding domain 105 171 1.6E-9 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Pfam PF00575 S1 RNA binding domain 449 520 1.0E-15 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Pfam PF00575 S1 RNA binding domain 361 434 9.5E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Pfam PF00575 S1 RNA binding domain 275 347 1.6E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Pfam PF00575 S1 RNA binding domain 20 78 1.9E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SMART SM00316 190 260 2.8E-28 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SMART SM00316 275 347 1.1E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SMART SM00316 362 434 3.4E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SMART SM00316 19 87 6.3E-5 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SMART SM00316 103 171 8.2E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SMART SM00316 449 520 3.3E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SUPERFAMILY SSF50249 103 185 2.83E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 6.9E-239 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SUPERFAMILY SSF50249 255 371 3.5E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 SUPERFAMILY SSF50249 1 112 1.01E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Gene3D G3DSA:2.40.50.140 274 348 3.8E-27 T 28-03-2018 DDI_RS08190 ddd78542396997ccd7ecb37cc362cd2f 557 Gene3D G3DSA:2.40.50.140 361 435 2.3E-20 T 28-03-2018 DDI_RS15785 90d0f84d00ff6cdded6b2d20089fa772 415 Gene3D G3DSA:3.20.20.140 60 382 8.9E-40 T 28-03-2018 DDI_RS15785 90d0f84d00ff6cdded6b2d20089fa772 415 Gene3D G3DSA:2.30.40.10 3 59 9.1E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS15785 90d0f84d00ff6cdded6b2d20089fa772 415 SUPERFAMILY SSF51556 51 371 9.98E-102 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS15785 90d0f84d00ff6cdded6b2d20089fa772 415 SUPERFAMILY SSF51338 3 53 4.01E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS15785 90d0f84d00ff6cdded6b2d20089fa772 415 Pfam PF07969 Amidohydrolase family 93 400 3.0E-39 T 28-03-2018 IPR013108 Amidohydrolase 3 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 SUPERFAMILY SSF68923 10 226 2.96E-89 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 8 538 1.6E-280 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 SUPERFAMILY SSF53795 228 538 1.74E-126 T 28-03-2018 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 PIRSF PIRSF006294 2 539 6.5E-228 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 54.785 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 Gene3D G3DSA:3.40.449.10 22 226 9.5E-76 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 Gene3D G3DSA:3.90.228.20 311 537 2.5E-91 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 Gene3D G3DSA:3.90.228.20 227 310 4.9E-30 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 3.3E-210 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDI_RS18445 b49ebec838ae07ae1df93c2a8a0adc1c 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 28-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDI_RS20170 47b8ced3ebbe6aec8c5330658e172d86 243 SUPERFAMILY SSF109755 13 228 6.7E-71 T 28-03-2018 DDI_RS20170 47b8ced3ebbe6aec8c5330658e172d86 243 Gene3D G3DSA:1.20.58.220 6 119 8.6E-29 T 28-03-2018 DDI_RS20170 47b8ced3ebbe6aec8c5330658e172d86 243 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 2.6E-73 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DDI_RS20170 47b8ced3ebbe6aec8c5330658e172d86 243 PIRSF PIRSF003107 7 226 1.3E-69 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DDI_RS20170 47b8ced3ebbe6aec8c5330658e172d86 243 Gene3D G3DSA:1.20.58.220 120 241 4.3E-27 T 28-03-2018 DDI_RS20170 47b8ced3ebbe6aec8c5330658e172d86 243 Pfam PF01895 PhoU domain 27 111 1.6E-21 T 28-03-2018 IPR026022 PhoU domain DDI_RS20170 47b8ced3ebbe6aec8c5330658e172d86 243 Pfam PF01895 PhoU domain 128 212 3.4E-18 T 28-03-2018 IPR026022 PhoU domain DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.248 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 3.8E-215 T 28-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 92 114 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 180 201 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 207 226 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 333 344 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 271 298 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 156 175 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 300 311 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 133 153 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 PRINTS PR00688 Xylose isomerase signature 229 253 1.6E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 SUPERFAMILY SSF51658 4 438 1.52E-174 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS20635 c957875a79e20e3f3cedc9537c852dcd 439 Gene3D G3DSA:3.20.20.150 2 439 2.2E-113 T 28-03-2018 DDI_RS09265 382ba6555d55c72a6a9dd6f0870fb762 349 Gene3D G3DSA:3.40.50.720 1 134 1.9E-34 T 28-03-2018 DDI_RS09265 382ba6555d55c72a6a9dd6f0870fb762 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 1.1E-14 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 DDI_RS09265 382ba6555d55c72a6a9dd6f0870fb762 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 5.4E-24 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDI_RS09265 382ba6555d55c72a6a9dd6f0870fb762 349 SUPERFAMILY SSF51735 3 192 9.86E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS09265 382ba6555d55c72a6a9dd6f0870fb762 349 SUPERFAMILY SSF55347 129 317 3.71E-29 T 28-03-2018 DDI_RS09265 382ba6555d55c72a6a9dd6f0870fb762 349 Gene3D G3DSA:3.30.360.10 135 347 2.6E-41 T 28-03-2018 DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 Gene3D G3DSA:3.40.190.10 82 180 2.2E-14 T 28-03-2018 DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 SUPERFAMILY SSF46785 6 114 6.35E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 Pfam PF03466 LysR substrate binding domain 90 294 4.3E-39 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 Gene3D G3DSA:3.40.190.10 181 268 1.4E-23 T 28-03-2018 DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 SUPERFAMILY SSF53850 91 296 7.6E-40 T 28-03-2018 DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 Gene3D G3DSA:1.10.10.10 3 81 1.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05575 67ca200d46e69804b1594134585fa82c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 Gene3D G3DSA:3.30.160.20 149 226 8.4E-21 T 28-03-2018 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.556 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 5.0E-74 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 Gene3D G3DSA:1.10.1520.10 5 148 2.2E-44 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 SMART SM00358 156 224 1.1E-23 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 SUPERFAMILY SSF54768 109 223 2.83E-27 T 28-03-2018 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 SMART SM00535 21 149 3.3E-59 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 Pfam PF14622 Ribonuclease-III-like 21 141 1.6E-33 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 2.1E-14 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain DDI_RS14270 d9aa312771dbefb86c3352bfb6a0261d 226 SUPERFAMILY SSF69065 5 159 1.92E-50 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 Gene3D G3DSA:1.20.1640.10 287 517 6.9E-44 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 SUPERFAMILY SSF82714 185 269 3.27E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 1.7E-234 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 Gene3D G3DSA:1.20.1640.10 815 1042 9.5E-29 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 SUPERFAMILY SSF82866 294 505 1.83E-40 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 Gene3D G3DSA:3.30.2090.10 723 809 5.9E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 Gene3D G3DSA:3.30.2090.10 183 271 5.0E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 Gene3D G3DSA:3.30.70.1430 567 665 3.0E-8 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 SUPERFAMILY SSF82693 138 184 3.4E-21 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 SUPERFAMILY SSF82693 271 328 3.4E-21 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 SUPERFAMILY SSF82693 46 127 2.14E-20 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 SUPERFAMILY SSF82714 723 806 1.83E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 SUPERFAMILY SSF82866 806 1043 1.96E-43 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 Gene3D G3DSA:3.30.70.1430 45 140 3.6E-21 T 28-03-2018 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1046 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.2E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 5.2E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.2E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.2E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS02520 535d61fd45d4d403ba95d8498165ee1b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.2E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.1E-39 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 SUPERFAMILY SSF109998 248 429 5.36E-47 T 28-03-2018 IPR027304 Trigger factor/SurA domain DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 228 1.2E-14 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 2.8E-140 T 28-03-2018 IPR005215 Trigger factor GO:0015031 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 6.5E-40 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 SUPERFAMILY SSF54534 96 241 2.75E-36 T 28-03-2018 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 Gene3D G3DSA:1.10.3120.10 211 389 1.9E-46 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 Gene3D G3DSA:3.30.70.1050 1 118 9.6E-34 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 PIRSF PIRSF003095 1 434 1.7E-127 T 28-03-2018 IPR005215 Trigger factor GO:0015031 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.568 T 28-03-2018 IPR005215 Trigger factor GO:0015031 DDI_RS04275 58fcd0659fecae05442f7ab46c94e22c 434 SUPERFAMILY SSF102735 1 130 1.83E-38 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DDI_RS12180 5fc4c97fc4d076e25400ccfd53a49ae6 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site DDI_RS12180 5fc4c97fc4d076e25400ccfd53a49ae6 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 8.8E-116 T 28-03-2018 IPR022522 Flagellar motor stator, MotA DDI_RS12180 5fc4c97fc4d076e25400ccfd53a49ae6 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 235 4.8E-10 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 DDI_RS12880 5e4406bdbf7b27af8a13435a53d26909 325 SUPERFAMILY SSF53850 61 256 5.16E-10 T 28-03-2018 DDI_RS12880 5e4406bdbf7b27af8a13435a53d26909 325 PIRSF PIRSF017082 1 325 9.1E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 DDI_RS12880 5e4406bdbf7b27af8a13435a53d26909 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 110 311 9.7E-20 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 DDI_RS12880 5e4406bdbf7b27af8a13435a53d26909 325 Gene3D G3DSA:3.40.190.10 121 237 4.1E-13 T 28-03-2018 DDI_RS04345 de67ed699d4182ea3982dfa6cf10cd8d 287 Pfam PF13622 Thioesterase-like superfamily 32 282 1.0E-60 T 28-03-2018 DDI_RS04345 de67ed699d4182ea3982dfa6cf10cd8d 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.2E-102 T 28-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 DDI_RS04345 de67ed699d4182ea3982dfa6cf10cd8d 287 Gene3D G3DSA:3.10.129.10 2 116 3.9E-42 T 28-03-2018 DDI_RS04345 de67ed699d4182ea3982dfa6cf10cd8d 287 SUPERFAMILY SSF54637 5 114 3.6E-40 T 28-03-2018 IPR029069 HotDog domain DDI_RS04345 de67ed699d4182ea3982dfa6cf10cd8d 287 SUPERFAMILY SSF54637 116 283 9.05E-59 T 28-03-2018 IPR029069 HotDog domain DDI_RS04345 de67ed699d4182ea3982dfa6cf10cd8d 287 Gene3D G3DSA:3.10.129.10 131 286 1.7E-53 T 28-03-2018 DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 SUPERFAMILY SSF53187 8 213 1.36E-73 T 28-03-2018 DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 SUPERFAMILY SSF53187 325 406 1.36E-73 T 28-03-2018 DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 Gene3D G3DSA:3.40.630.10 2 413 1.4E-46 T 28-03-2018 DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 TIGRFAM TIGR01882 peptidase-T: peptidase T 8 405 2.0E-98 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 Pfam PF01546 Peptidase family M20/M25/M40 143 402 3.8E-10 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 Pfam PF07687 Peptidase dimerisation domain 209 309 5.9E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 PIRSF PIRSF037215 4 411 5.0E-146 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DDI_RS07270 8a0f0fee213efad17b7545b95985c033 413 SUPERFAMILY SSF55031 212 322 2.54E-32 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS17450 282b6c1b420c1101e1d887d2ac33ca0b 176 SUPERFAMILY SSF55729 21 136 1.13E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS17450 282b6c1b420c1101e1d887d2ac33ca0b 176 Pfam PF00583 Acetyltransferase (GNAT) family 43 127 9.3E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS17450 282b6c1b420c1101e1d887d2ac33ca0b 176 Gene3D G3DSA:3.40.630.30 1 154 1.7E-21 T 28-03-2018 DDI_RS13655 d803a06fb1208f86b73eacc5713aa3f2 243 Gene3D G3DSA:3.40.50.2300 1 130 1.0E-34 T 28-03-2018 DDI_RS13655 d803a06fb1208f86b73eacc5713aa3f2 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 234 1.0E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS13655 d803a06fb1208f86b73eacc5713aa3f2 243 SUPERFAMILY SSF52172 11 137 6.83E-40 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS13655 d803a06fb1208f86b73eacc5713aa3f2 243 SMART SM00862 159 235 4.1E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS13655 d803a06fb1208f86b73eacc5713aa3f2 243 SMART SM00448 14 124 2.0E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS13655 d803a06fb1208f86b73eacc5713aa3f2 243 SUPERFAMILY SSF46894 145 236 5.67E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS13655 d803a06fb1208f86b73eacc5713aa3f2 243 Pfam PF00072 Response regulator receiver domain 16 124 1.1E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS13655 d803a06fb1208f86b73eacc5713aa3f2 243 Gene3D G3DSA:1.10.10.10 131 242 3.3E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05555 d8cb7d4c766ffca78d4644155c5f72a2 205 SUPERFAMILY SSF51569 3 203 9.71E-59 T 28-03-2018 DDI_RS05555 d8cb7d4c766ffca78d4644155c5f72a2 205 Pfam PF01081 KDPG and KHG aldolase 6 183 6.2E-31 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DDI_RS05555 d8cb7d4c766ffca78d4644155c5f72a2 205 Gene3D G3DSA:3.20.20.70 2 205 2.7E-41 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS10390 27c815ba78f89585bcca35835859ebe5 409 Gene3D G3DSA:1.20.1560.10 70 284 4.4E-13 T 28-03-2018 DDI_RS10390 27c815ba78f89585bcca35835859ebe5 409 Pfam PF05992 SbmA/BacA-like family 80 393 2.5E-166 T 28-03-2018 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 DDI_RS10390 27c815ba78f89585bcca35835859ebe5 409 SUPERFAMILY SSF90123 300 389 4.05E-5 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS10390 27c815ba78f89585bcca35835859ebe5 409 Gene3D G3DSA:1.20.1560.10 296 397 2.1E-4 T 28-03-2018 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 SUPERFAMILY SSF63380 148 253 7.7E-27 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 Pfam PF00970 Oxidoreductase FAD-binding domain 158 253 3.7E-8 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 Hamap MF_01252 Flavohemoprotein [hmp]. 1 395 55.27 T 28-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 8.7E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 8.7E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 357 365 8.7E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 8.7E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 Pfam PF00042 Globin 7 102 2.4E-14 T 28-03-2018 IPR000971 Globin GO:0020037 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 Gene3D G3DSA:2.40.30.10 158 252 1.1E-25 T 28-03-2018 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 SUPERFAMILY SSF46458 1 142 5.49E-38 T 28-03-2018 IPR009050 Globin-like DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 Gene3D G3DSA:1.10.490.10 1 157 6.4E-40 T 28-03-2018 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.2E-7 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 357 365 1.2E-7 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.2E-7 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.2E-7 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 SUPERFAMILY SSF52343 257 394 8.38E-33 T 28-03-2018 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 Gene3D G3DSA:3.40.50.80 253 389 1.1E-19 T 28-03-2018 DDI_RS14150 3b2fa25df48f4697037c9f157cfe5564 395 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 1.1E-12 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDI_RS07165 c87ef361c33325270d1c70c3b33e342d 319 Pfam PF01933 Uncharacterised protein family UPF0052 12 291 2.6E-70 T 28-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 DDI_RS07165 c87ef361c33325270d1c70c3b33e342d 319 Gene3D G3DSA:3.40.50.10680 89 304 7.9E-34 T 28-03-2018 DDI_RS07165 c87ef361c33325270d1c70c3b33e342d 319 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 265 3.4E-90 T 28-03-2018 IPR010119 Gluconeogenesis factor DDI_RS07165 c87ef361c33325270d1c70c3b33e342d 319 Hamap MF_00973 Gluconeogenesis factor. 8 300 29.972 T 28-03-2018 IPR010119 Gluconeogenesis factor DDI_RS07165 c87ef361c33325270d1c70c3b33e342d 319 SUPERFAMILY SSF142338 11 294 4.97E-77 T 28-03-2018 DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 SMART SM00244 18 176 8.9E-60 T 28-03-2018 IPR001107 Band 7 domain DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 28-03-2018 IPR018080 Band 7/stomatin-like, conserved site DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 Pfam PF01145 SPFH domain / Band 7 family 22 191 5.2E-32 T 28-03-2018 IPR001107 Band 7 domain DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 PRINTS PR00721 Stomatin signature 108 125 2.1E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 PRINTS PR00721 Stomatin signature 128 151 2.1E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 PRINTS PR00721 Stomatin signature 152 170 2.1E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 PRINTS PR00721 Stomatin signature 171 192 2.1E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 PRINTS PR00721 Stomatin signature 73 94 2.1E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 DDI_RS04510 5efc334be23eff781414450db0a10ccb 304 SUPERFAMILY SSF117892 49 183 8.76E-41 T 28-03-2018 IPR001107 Band 7 domain DDI_RS01935 1e2bdf78ee4aa7c065ef7f2b7005d87b 116 SUPERFAMILY SSF160719 12 104 3.01E-26 T 28-03-2018 DDI_RS01935 1e2bdf78ee4aa7c065ef7f2b7005d87b 116 Pfam PF04965 Gene 25-like lysozyme 18 99 1.0E-13 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DDI_RS01935 1e2bdf78ee4aa7c065ef7f2b7005d87b 116 Gene3D G3DSA:3.10.450.40 4 113 1.6E-22 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82693 673 722 2.88E-24 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82693 813 861 2.88E-24 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82866 837 1031 2.22E-39 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 4.6E-108 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82693 136 183 1.41E-25 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82693 275 331 1.41E-25 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 Gene3D G3DSA:1.20.1640.10 822 1033 5.6E-33 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 Gene3D G3DSA:1.20.1640.10 275 501 1.7E-46 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 Gene3D G3DSA:3.30.70.1440 673 769 8.0E-16 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82693 566 672 6.8E-29 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 Gene3D G3DSA:3.30.70.1430 39 141 2.0E-27 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82866 297 498 8.76E-50 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 Gene3D G3DSA:3.30.70.1430 568 669 8.6E-21 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82714 723 814 1.83E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 Gene3D G3DSA:3.30.2090.10 181 274 1.4E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82693 39 132 1.2E-24 T 28-03-2018 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 SUPERFAMILY SSF82714 183 273 1.57E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1043 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 DDI_RS12515 857d068a34b7fa0d9286af57b1b36f8b 1053 Pfam PF00873 AcrB/AcrD/AcrF family 2 1031 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS19750 28292e34b44b369e73c114772e06731a 91 SMART SM01409 8 61 1.2E-13 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 DDI_RS19750 28292e34b44b369e73c114772e06731a 91 SUPERFAMILY SSF63562 1 79 2.62E-24 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 DDI_RS19750 28292e34b44b369e73c114772e06731a 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 15.93 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS19750 28292e34b44b369e73c114772e06731a 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 3.4E-29 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS19750 28292e34b44b369e73c114772e06731a 91 Gene3D G3DSA:3.90.940.10 1 91 2.6E-27 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 DDI_RS19750 28292e34b44b369e73c114772e06731a 91 Pfam PF01192 RNA polymerase Rpb6 10 59 7.0E-15 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 DDI_RS21010 1c9e7503ca8e728020610ad9f73087bf 273 Gene3D G3DSA:3.40.50.10780 1 211 6.9E-80 T 28-03-2018 IPR027476 D-aminopeptidase, N-terminal DDI_RS21010 1c9e7503ca8e728020610ad9f73087bf 273 SUPERFAMILY SSF63992 1 270 9.02E-91 T 28-03-2018 IPR007035 Peptidase M55, D-aminopeptidase DDI_RS21010 1c9e7503ca8e728020610ad9f73087bf 273 PIRSF PIRSF015853 1 273 9.7E-100 T 28-03-2018 IPR007035 Peptidase M55, D-aminopeptidase DDI_RS21010 1c9e7503ca8e728020610ad9f73087bf 273 Pfam PF04951 D-aminopeptidase 1 261 9.3E-96 T 28-03-2018 IPR007035 Peptidase M55, D-aminopeptidase DDI_RS21010 1c9e7503ca8e728020610ad9f73087bf 273 Gene3D G3DSA:3.30.1360.130 212 270 7.0E-13 T 28-03-2018 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 Pfam PF00239 Resolvase, N terminal domain 3 135 1.9E-46 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 Pfam PF02796 Helix-turn-helix domain of resolvase 138 181 1.4E-8 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 Gene3D G3DSA:1.20.5.40 107 134 4.5E-20 T 28-03-2018 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 Gene3D G3DSA:1.10.10.60 138 185 5.4E-10 T 28-03-2018 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 SUPERFAMILY SSF53041 1 135 9.16E-45 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 SMART SM00857 2 136 6.5E-59 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 Gene3D G3DSA:3.40.50.1390 1 106 4.3E-34 T 28-03-2018 DDI_RS10740 748f21ba820ac41df99b6b13a34f5644 186 SUPERFAMILY SSF46689 138 183 2.15E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 Pfam PF00232 Glycosyl hydrolase family 1 3 475 9.9E-131 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 Gene3D G3DSA:3.20.20.80 1 478 3.8E-151 T 28-03-2018 DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 SUPERFAMILY SSF51445 2 476 5.21E-158 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 4.5E-17 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 4.5E-17 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 4.5E-17 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 4.5E-17 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS00705 748516365266c1a5db14c3b7d8dfc509 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 4.5E-17 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS03400 b23bdbd5874073d9e686d809abeef58d 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 2.5E-21 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DDI_RS03400 b23bdbd5874073d9e686d809abeef58d 334 Gene3D G3DSA:1.10.150.20 221 290 0.004 T 28-03-2018 DDI_RS03400 b23bdbd5874073d9e686d809abeef58d 334 Gene3D G3DSA:1.10.340.30 107 220 7.1E-6 T 28-03-2018 DDI_RS03400 b23bdbd5874073d9e686d809abeef58d 334 Pfam PF01548 Transposase 7 147 8.1E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DDI_RS03160 26c7d221a6bc3a3d00ce4e4f3a55e5ba 232 Gene3D G3DSA:3.30.70.20 117 152 1.7E-18 T 28-03-2018 DDI_RS03160 26c7d221a6bc3a3d00ce4e4f3a55e5ba 232 Gene3D G3DSA:3.30.70.20 55 116 6.1E-17 T 28-03-2018 DDI_RS03160 26c7d221a6bc3a3d00ce4e4f3a55e5ba 232 SUPERFAMILY SSF54862 42 223 2.3E-59 T 28-03-2018 DDI_RS03160 26c7d221a6bc3a3d00ce4e4f3a55e5ba 232 Pfam PF12800 4Fe-4S binding domain 51 62 0.07 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS03160 26c7d221a6bc3a3d00ce4e4f3a55e5ba 232 Gene3D G3DSA:3.30.70.20 153 229 3.1E-23 T 28-03-2018 DDI_RS03160 26c7d221a6bc3a3d00ce4e4f3a55e5ba 232 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS03160 26c7d221a6bc3a3d00ce4e4f3a55e5ba 232 Pfam PF13247 4Fe-4S dicluster domain 94 189 2.9E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS03160 26c7d221a6bc3a3d00ce4e4f3a55e5ba 232 Gene3D G3DSA:3.30.70.20 26 54 0.0021 T 28-03-2018 DDI_RS13880 e8dc826e496e569941535ad6cd39e83b 98 SMART SM00530 28 83 4.4E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS13880 e8dc826e496e569941535ad6cd39e83b 98 SUPERFAMILY SSF47413 23 88 1.86E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS13880 e8dc826e496e569941535ad6cd39e83b 98 Gene3D G3DSA:1.10.260.40 13 98 1.6E-18 T 28-03-2018 DDI_RS13880 e8dc826e496e569941535ad6cd39e83b 98 Pfam PF13560 Helix-turn-helix domain 24 82 2.4E-12 T 28-03-2018 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 SMART SM00354 1 71 2.1E-36 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 Gene3D G3DSA:1.10.260.40 2 55 7.7E-22 T 28-03-2018 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 Gene3D G3DSA:3.40.50.2300 56 172 1.0E-29 T 28-03-2018 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 SUPERFAMILY SSF47413 1 59 2.57E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 SUPERFAMILY SSF53822 61 330 5.78E-81 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 Gene3D G3DSA:3.40.50.2300 173 307 1.6E-40 T 28-03-2018 DDI_RS15870 7f789c62d1390625a265d88dca958cd0 336 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.6E-33 T 28-03-2018 DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 SUPERFAMILY SSF54826 1 112 2.15E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 SMART SM00922 125 230 7.7E-16 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 Pfam PF13378 Enolase C-terminal domain-like 137 355 3.5E-55 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.263 T 28-03-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 1.6E-29 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 SUPERFAMILY SSF51604 95 357 1.97E-74 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 Gene3D G3DSA:3.30.390.10 2 97 1.3E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS05560 eeaa2c3486c2e1a75b2d83ea348f72bd 382 Gene3D G3DSA:3.20.20.120 98 353 7.4E-70 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS06425 e5b42e2287f366fb2f1e4e6c5d33d34b 317 SUPERFAMILY SSF53590 4 309 1.31E-86 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS06425 e5b42e2287f366fb2f1e4e6c5d33d34b 317 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 303 1.4E-84 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS06425 e5b42e2287f366fb2f1e4e6c5d33d34b 317 Gene3D G3DSA:3.90.245.10 2 314 8.3E-96 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS06095 bdce5de375d0dba06955a02fa3b4d1fb 580 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 6 569 9.9E-161 T 28-03-2018 IPR010144 CRISPR-associated protein, Csd1-type DDI_RS06095 bdce5de375d0dba06955a02fa3b4d1fb 580 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 3 573 1.7E-160 T 28-03-2018 IPR010144 CRISPR-associated protein, Csd1-type DDI_RS15315 1826610b6eb64d7e2456ab6847fb331c 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDI_RS15315 1826610b6eb64d7e2456ab6847fb331c 432 Pfam PF07690 Major Facilitator Superfamily 61 384 2.6E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS15315 1826610b6eb64d7e2456ab6847fb331c 432 Gene3D G3DSA:1.20.1250.20 231 428 9.7E-20 T 28-03-2018 DDI_RS15315 1826610b6eb64d7e2456ab6847fb331c 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 418 4.8E-140 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 DDI_RS15315 1826610b6eb64d7e2456ab6847fb331c 432 SUPERFAMILY SSF103473 20 431 2.09E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS15315 1826610b6eb64d7e2456ab6847fb331c 432 Gene3D G3DSA:1.20.1250.20 16 230 3.9E-24 T 28-03-2018 DDI_RS09745 6fbf348b579fa157f5e570ab730a2765 373 Gene3D G3DSA:3.40.190.10 211 326 3.5E-9 T 28-03-2018 DDI_RS09745 6fbf348b579fa157f5e570ab730a2765 373 Pfam PF13343 Bacterial extracellular solute-binding protein 104 305 5.5E-12 T 28-03-2018 DDI_RS09745 6fbf348b579fa157f5e570ab730a2765 373 SUPERFAMILY SSF53850 46 325 1.75E-44 T 28-03-2018 DDI_RS09745 6fbf348b579fa157f5e570ab730a2765 373 Gene3D G3DSA:3.40.190.10 41 210 2.5E-18 T 28-03-2018 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Pfam PF03979 Sigma-70 factor, region 1.1 19 94 7.5E-30 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Pfam PF04546 Sigma-70, non-essential region 152 361 3.0E-74 T 28-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Pfam PF04542 Sigma-70 region 2 392 461 1.7E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Pfam PF04539 Sigma-70 region 3 471 546 3.6E-29 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Pfam PF00140 Sigma-70 factor, region 1.2 111 141 1.8E-12 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 585 611 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Gene3D G3DSA:1.10.601.10 14 127 5.0E-13 T 28-03-2018 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Gene3D G3DSA:1.10.601.10 128 461 3.2E-106 T 28-03-2018 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 388 613 3.7E-38 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 PRINTS PR00046 Major sigma-70 factor signature 585 600 7.0E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 PRINTS PR00046 Major sigma-70 factor signature 440 448 7.0E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 PRINTS PR00046 Major sigma-70 factor signature 600 611 7.0E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 PRINTS PR00046 Major sigma-70 factor signature 564 576 7.0E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 PRINTS PR00046 Major sigma-70 factor signature 416 429 7.0E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 SUPERFAMILY SSF88659 522 624 2.42E-25 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Pfam PF04545 Sigma-70, region 4 560 613 1.1E-18 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 SUPERFAMILY SSF88659 465 538 1.57E-20 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Gene3D G3DSA:1.10.10.10 555 625 6.8E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 19 625 46.838 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 416 429 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 SUPERFAMILY SSF88946 128 459 8.01E-100 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 Gene3D G3DSA:1.10.10.10 462 512 8.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02015 25e866d58bdacba5387bde4f850d5b1a 626 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 388 624 8.2E-121 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 420 1.5E-17 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 Gene3D G3DSA:1.20.5.170 207 230 1.0E-14 T 28-03-2018 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 SUPERFAMILY SSF51735 5 196 4.06E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 207 294 1.6E-26 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 PIRSF PIRSF500136 1 421 2.1E-140 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 SMART SM00984 325 421 1.9E-21 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 PIRSF PIRSF000124 4 420 1.1E-67 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 SUPERFAMILY SSF48179 207 300 9.18E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 Gene3D G3DSA:3.40.50.720 231 421 1.1E-48 T 28-03-2018 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 8.4E-50 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 417 3.1E-111 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 SUPERFAMILY SSF52413 317 420 1.44E-21 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DDI_RS18835 0448fb32dab0a62059d72c9acb1af035 421 Gene3D G3DSA:3.40.50.720 3 205 4.3E-40 T 28-03-2018 DDI_RS12785 d2e493e26f540190722eaae70a5f7a78 209 SUPERFAMILY SSF47616 78 204 1.02E-37 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS12785 d2e493e26f540190722eaae70a5f7a78 209 SUPERFAMILY SSF52833 1 84 1.17E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS12785 d2e493e26f540190722eaae70a5f7a78 209 Gene3D G3DSA:3.40.30.10 1 93 3.1E-26 T 28-03-2018 DDI_RS12785 d2e493e26f540190722eaae70a5f7a78 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 197 1.1E-13 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal DDI_RS12785 d2e493e26f540190722eaae70a5f7a78 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 1.1E-11 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS12785 d2e493e26f540190722eaae70a5f7a78 209 Gene3D G3DSA:1.20.1050.10 94 147 7.5E-17 T 28-03-2018 DDI_RS12785 d2e493e26f540190722eaae70a5f7a78 209 Gene3D G3DSA:1.20.1050.10 148 201 5.1E-14 T 28-03-2018 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 Pfam PF00136 DNA polymerase family B 384 743 1.7E-39 T 28-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 ProSitePatterns PS00116 DNA polymerase family B signature. 549 557 - T 28-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 SUPERFAMILY SSF53098 7 395 4.64E-89 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 Pfam PF03104 DNA polymerase family B, exonuclease domain 83 258 1.4E-10 T 28-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 495 507 7.2E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 421 434 7.2E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 547 555 7.2E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 Gene3D G3DSA:3.90.1600.10 410 643 7.6E-50 T 28-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 Gene3D G3DSA:3.30.420.10 156 353 4.3E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 SMART SM00486 153 561 8.1E-64 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS16905 761b1cbbfd42aea1b352c8d02320790c 790 SUPERFAMILY SSF56672 391 784 2.39E-114 T 28-03-2018 DDI_RS15310 8f458fc58b6911e2f249e7d78e546b86 107 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 24 100 2.0E-8 T 28-03-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein DDI_RS15310 8f458fc58b6911e2f249e7d78e546b86 107 PIRSF PIRSF034456 1 106 3.4E-50 T 28-03-2018 IPR017028 Uncharacterised conserved protein UCP034456 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 2.1E-181 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 Pfam PF00871 Acetokinase family 6 393 9.5E-174 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 PIRSF PIRSF000722 2 400 1.5E-143 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 PRINTS PR00471 Acetate kinase family signature 206 227 1.3E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 PRINTS PR00471 Acetate kinase family signature 380 392 1.3E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 PRINTS PR00471 Acetate kinase family signature 6 17 1.3E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 PRINTS PR00471 Acetate kinase family signature 302 315 1.3E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 PRINTS PR00471 Acetate kinase family signature 325 341 1.3E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 PRINTS PR00471 Acetate kinase family signature 176 189 1.3E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 Gene3D G3DSA:3.30.420.40 5 198 6.6E-67 T 28-03-2018 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 SUPERFAMILY SSF53067 4 199 9.58E-64 T 28-03-2018 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.999 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 Gene3D G3DSA:3.30.420.40 199 400 1.9E-76 T 28-03-2018 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 SUPERFAMILY SSF53067 159 398 2.27E-84 T 28-03-2018 DDI_RS12765 47b0b2e86a4248b07e281209b197a18e 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDI_RS12525 f3be56c12b1afab9756eb970bcf0ec84 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 59 72 9.7E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS12525 f3be56c12b1afab9756eb970bcf0ec84 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 80 103 9.7E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS12525 f3be56c12b1afab9756eb970bcf0ec84 240 SUPERFAMILY SSF46689 49 123 9.48E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS12525 f3be56c12b1afab9756eb970bcf0ec84 240 Pfam PF00440 Bacterial regulatory proteins, tetR family 59 105 3.0E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS12525 f3be56c12b1afab9756eb970bcf0ec84 240 Gene3D G3DSA:1.10.10.60 29 103 9.9E-20 T 28-03-2018 DDI_RS12525 f3be56c12b1afab9756eb970bcf0ec84 240 Gene3D G3DSA:1.10.357.10 104 235 3.6E-7 T 28-03-2018 DDI_RS17110 c067dea8ae70b724fbe5d4e24c44d037 216 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 216 52.009 T 28-03-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 DDI_RS17110 c067dea8ae70b724fbe5d4e24c44d037 216 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 DDI_RS17110 c067dea8ae70b724fbe5d4e24c44d037 216 PIRSF PIRSF000709 2 174 7.5E-13 T 28-03-2018 DDI_RS17110 c067dea8ae70b724fbe5d4e24c44d037 216 SUPERFAMILY SSF53254 1 209 1.07E-54 T 28-03-2018 IPR029033 Histidine phosphatase superfamily DDI_RS17110 c067dea8ae70b724fbe5d4e24c44d037 216 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 2.2E-54 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDI_RS17110 c067dea8ae70b724fbe5d4e24c44d037 216 Gene3D G3DSA:3.40.50.1240 2 212 3.3E-53 T 28-03-2018 IPR029033 Histidine phosphatase superfamily DDI_RS17110 c067dea8ae70b724fbe5d4e24c44d037 216 SMART SM00855 3 158 1.0E-23 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 Pfam PF00106 short chain dehydrogenase 4 197 9.2E-61 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 0.0068 T 28-03-2018 DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 TIGRFAM TIGR02415 23BDH: acetoin reductases 4 257 6.5E-122 T 28-03-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 SUPERFAMILY SSF51735 2 255 4.05E-81 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 Gene3D G3DSA:3.40.50.720 39 257 7.8E-62 T 28-03-2018 DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 Gene3D G3DSA:3.40.50.720 1 38 3.3E-9 T 28-03-2018 DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS14850 5d58079e7b58c311dd21d89bf982c924 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05150 1998af2b9cd60b3106d7c8dd5c37781c 38 Pfam PF08173 Membrane bound YbgT-like protein 1 27 4.9E-15 T 28-03-2018 IPR012994 Membrane bound YbgT-like DDI_RS05150 1998af2b9cd60b3106d7c8dd5c37781c 38 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.3E-19 T 28-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 DDI_RS10695 ec658fc43285141f6d8cd1723d8af206 217 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 15 215 7.0E-66 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 DDI_RS10695 ec658fc43285141f6d8cd1723d8af206 217 Pfam PF04717 Type VI secretion system, phage-baseplate injector 13 123 4.7E-47 T 28-03-2018 IPR006531 Gp5 N-terminal DDI_RS10695 ec658fc43285141f6d8cd1723d8af206 217 Gene3D G3DSA:2.40.50.260 22 107 0.002 T 28-03-2018 DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 Pfam PF03466 LysR substrate binding domain 91 297 3.2E-38 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 Gene3D G3DSA:3.40.190.10 184 269 9.4E-18 T 28-03-2018 DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 SUPERFAMILY SSF46785 5 115 1.24E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 Gene3D G3DSA:3.40.190.10 92 183 2.1E-20 T 28-03-2018 DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 SUPERFAMILY SSF53850 92 298 5.1E-38 T 28-03-2018 DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 Gene3D G3DSA:1.10.10.10 1 87 2.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17490 dd81d9787410d47c12e7fa11e38564fe 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.2E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS00450 bf82786f22f828d99fba2c9e59f45be3 193 SUPERFAMILY SSF53474 2 188 3.57E-19 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS00450 bf82786f22f828d99fba2c9e59f45be3 193 Gene3D G3DSA:3.40.50.1820 1 190 3.6E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS00450 bf82786f22f828d99fba2c9e59f45be3 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 5.1E-70 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DDI_RS08390 12660bafac66278a87a5a818eeb6fe73 440 Pfam PF03882 MukF winged-helix domain 3 117 1.9E-57 T 28-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain DDI_RS08390 12660bafac66278a87a5a818eeb6fe73 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.047 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 DDI_RS08390 12660bafac66278a87a5a818eeb6fe73 440 SUPERFAMILY SSF140570 119 281 7.98E-75 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain DDI_RS08390 12660bafac66278a87a5a818eeb6fe73 440 Gene3D G3DSA:1.10.10.10 24 116 1.4E-40 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08390 12660bafac66278a87a5a818eeb6fe73 440 Pfam PF17192 MukF middle domain 121 281 8.5E-83 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain DDI_RS08390 12660bafac66278a87a5a818eeb6fe73 440 PIRSF PIRSF018282 1 440 1.5E-241 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 DDI_RS08390 12660bafac66278a87a5a818eeb6fe73 440 Pfam PF17193 MukF C-terminal domain 283 440 1.4E-78 T 28-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain DDI_RS08390 12660bafac66278a87a5a818eeb6fe73 440 SUPERFAMILY SSF46785 8 118 1.12E-49 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21140 0d83e145121d7e1b91351f917cf0eb2b 361 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 11 354 9.1E-92 T 28-03-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative DDI_RS21140 0d83e145121d7e1b91351f917cf0eb2b 361 SUPERFAMILY SSF53756 10 355 6.85E-84 T 28-03-2018 DDI_RS21140 0d83e145121d7e1b91351f917cf0eb2b 361 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 83 331 9.5E-44 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 DDI_RS21140 0d83e145121d7e1b91351f917cf0eb2b 361 Gene3D G3DSA:3.40.50.2000 10 168 2.0E-36 T 28-03-2018 DDI_RS21140 0d83e145121d7e1b91351f917cf0eb2b 361 Gene3D G3DSA:3.40.50.2000 174 360 1.9E-47 T 28-03-2018 DDI_RS06800 189e76a5490aed94f0b5de56a259b680 110 Gene3D G3DSA:2.60.120.10 7 110 1.2E-34 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS06800 189e76a5490aed94f0b5de56a259b680 110 SUPERFAMILY SSF51197 4 108 2.61E-34 T 28-03-2018 DDI_RS06800 189e76a5490aed94f0b5de56a259b680 110 PIRSF PIRSF020632 3 107 2.0E-44 T 28-03-2018 IPR014510 Tellurite resistance predicted, YeaR DDI_RS06800 189e76a5490aed94f0b5de56a259b680 110 Pfam PF09313 Domain of unknown function (DUF1971) 14 98 1.6E-25 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 DDI_RS14915 803ced2d082540d127daed285bbdfd58 241 Pfam PF00072 Response regulator receiver domain 4 112 7.3E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS14915 803ced2d082540d127daed285bbdfd58 241 SMART SM00850 143 238 1.2E-25 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DDI_RS14915 803ced2d082540d127daed285bbdfd58 241 Gene3D G3DSA:3.40.50.2300 1 132 1.2E-29 T 28-03-2018 DDI_RS14915 803ced2d082540d127daed285bbdfd58 241 SMART SM00448 2 112 1.8E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS14915 803ced2d082540d127daed285bbdfd58 241 Pfam PF04397 LytTr DNA-binding domain 144 237 2.7E-23 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DDI_RS14915 803ced2d082540d127daed285bbdfd58 241 Gene3D G3DSA:2.20.25.10 203 238 4.3E-7 T 28-03-2018 DDI_RS14915 803ced2d082540d127daed285bbdfd58 241 SUPERFAMILY SSF52172 1 122 1.42E-32 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS14915 803ced2d082540d127daed285bbdfd58 241 Gene3D G3DSA:2.40.50.40 133 201 1.2E-7 T 28-03-2018 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 52 1.0E-17 T 28-03-2018 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS02025 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14755 10af438a9d33dbbdccb3a69d87bb590b 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 28-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS14755 10af438a9d33dbbdccb3a69d87bb590b 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.855 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14755 10af438a9d33dbbdccb3a69d87bb590b 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.6E-28 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14755 10af438a9d33dbbdccb3a69d87bb590b 82 Pfam PF00886 Ribosomal protein S16 8 68 1.0E-23 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14755 10af438a9d33dbbdccb3a69d87bb590b 82 SUPERFAMILY SSF54565 1 76 4.84E-28 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14755 10af438a9d33dbbdccb3a69d87bb590b 82 Gene3D G3DSA:3.30.1320.10 1 79 4.9E-31 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS20825 9f9383b0b3d76fb954d53fcb636df615 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS20825 9f9383b0b3d76fb954d53fcb636df615 527 SUPERFAMILY SSF56801 6 512 1.96E-132 T 28-03-2018 DDI_RS20825 9f9383b0b3d76fb954d53fcb636df615 527 Gene3D G3DSA:3.30.300.30 413 517 2.4E-26 T 28-03-2018 DDI_RS20825 9f9383b0b3d76fb954d53fcb636df615 527 Gene3D G3DSA:3.40.50.980 3 175 4.8E-39 T 28-03-2018 DDI_RS20825 9f9383b0b3d76fb954d53fcb636df615 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 501 8.4E-18 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS20825 9f9383b0b3d76fb954d53fcb636df615 527 Pfam PF00501 AMP-binding enzyme 12 418 1.4E-89 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS20825 9f9383b0b3d76fb954d53fcb636df615 527 Gene3D G3DSA:3.40.50.980 176 325 4.5E-33 T 28-03-2018 DDI_RS20825 9f9383b0b3d76fb954d53fcb636df615 527 Gene3D G3DSA:2.30.38.10 326 412 7.8E-22 T 28-03-2018 DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 SUPERFAMILY SSF55594 290 376 9.16E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 Gene3D G3DSA:3.40.930.10 3 143 7.7E-32 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 3.9E-28 T 28-03-2018 IPR002178 PTS EIIA type-2 domain DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 Gene3D G3DSA:3.30.1340.10 284 371 3.1E-25 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 290 370 9.0E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 SUPERFAMILY SSF55804 149 276 4.01E-10 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 PRINTS PR00107 Phosphocarrier protein signature 299 315 7.7E-17 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 PRINTS PR00107 Phosphocarrier protein signature 342 359 7.7E-17 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 PRINTS PR00107 Phosphocarrier protein signature 327 342 7.7E-17 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 Pfam PF00381 PTS HPr component phosphorylation site 291 371 9.0E-25 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS07740 abc70e97b605ff320e9ca7d2679afa5c 379 SUPERFAMILY SSF55804 2 140 4.45E-38 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 171 1.3E-16 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 1.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 1.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 1.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 1.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 477 8.7E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 Gene3D G3DSA:1.10.287.950 322 514 1.8E-45 T 28-03-2018 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 Gene3D G3DSA:1.20.120.30 22 187 6.7E-9 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 SMART SM00304 210 262 1.6E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 Pfam PF00672 HAMP domain 210 258 3.9E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 SUPERFAMILY SSF58104 231 511 9.16E-71 T 28-03-2018 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 Gene3D G3DSA:1.10.287.1060 240 321 6.8E-5 T 28-03-2018 DDI_RS00585 604d3e7c392b907cd336956ad1a5d2c3 558 SMART SM00283 263 510 1.0E-86 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS04855 aea3337030df11769cc28405eeb0a27c 184 Gene3D G3DSA:3.30.160.150 20 173 9.3E-48 T 28-03-2018 DDI_RS04855 aea3337030df11769cc28405eeb0a27c 184 Pfam PF04390 Lipopolysaccharide-assembly 43 159 1.2E-13 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DDI_RS04855 aea3337030df11769cc28405eeb0a27c 184 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 25.394 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DDI_RS01575 b6bdbc2dd5078b0d768f76824d206573 825 PIRSF PIRSF500064 2 815 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 DDI_RS01575 b6bdbc2dd5078b0d768f76824d206573 825 Pfam PF01553 Acyltransferase 283 425 4.5E-26 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS01575 b6bdbc2dd5078b0d768f76824d206573 825 PIRSF PIRSF000437 19 814 0.0 T 28-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 DDI_RS01575 b6bdbc2dd5078b0d768f76824d206573 825 SMART SM00563 301 428 2.4E-27 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS01575 b6bdbc2dd5078b0d768f76824d206573 825 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 800 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 DDI_RS01575 b6bdbc2dd5078b0d768f76824d206573 825 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 808 32.315 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 DDI_RS01575 b6bdbc2dd5078b0d768f76824d206573 825 Gene3D G3DSA:3.40.1130.10 239 525 5.2E-35 T 28-03-2018 DDI_RS01575 b6bdbc2dd5078b0d768f76824d206573 825 SUPERFAMILY SSF69593 274 487 2.75E-24 T 28-03-2018 DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 483 5.9E-47 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 SMART SM00091 8 75 2.9E-4 T 28-03-2018 IPR000014 PAS domain DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 SUPERFAMILY SSF55785 21 114 2.97E-25 T 28-03-2018 IPR000014 PAS domain DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 SMART SM00283 268 515 5.7E-76 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 114 1.4E-14 T 28-03-2018 IPR000014 PAS domain DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 SUPERFAMILY SSF58104 252 515 2.75E-62 T 28-03-2018 DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 Gene3D G3DSA:3.40.50.10600 2 131 2.9E-27 T 28-03-2018 DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 Pfam PF08447 PAS fold 30 112 2.2E-14 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 Gene3D G3DSA:1.10.287.950 216 321 4.9E-9 T 28-03-2018 DDI_RS10805 ddf332dadda99d01ca977d72dbe8d664 515 Gene3D G3DSA:1.10.287.950 322 515 6.9E-42 T 28-03-2018 DDI_RS11780 3a48a938c5b631ed99aab78468f0effc 173 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 7.5E-19 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DDI_RS01500 e77d5fcc9de6ae3854751567f58f60fe 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 123 151 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDI_RS01500 e77d5fcc9de6ae3854751567f58f60fe 166 PIRSF PIRSF000441 8 166 1.4E-34 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 DDI_RS01500 e77d5fcc9de6ae3854751567f58f60fe 166 SUPERFAMILY SSF51161 26 159 1.66E-30 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS01500 e77d5fcc9de6ae3854751567f58f60fe 166 Gene3D G3DSA:2.160.10.10 16 165 2.7E-23 T 28-03-2018 DDI_RS01500 e77d5fcc9de6ae3854751567f58f60fe 166 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 69 102 6.8E-4 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS01500 e77d5fcc9de6ae3854751567f58f60fe 166 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 149 5.4E-9 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Gene3D G3DSA:3.40.228.10 209 484 2.1E-63 T 28-03-2018 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 SUPERFAMILY SSF50692 835 1016 2.94E-38 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Gene3D G3DSA:2.20.25.90 38 108 8.6E-18 T 28-03-2018 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Gene3D G3DSA:3.40.228.10 729 840 9.4E-14 T 28-03-2018 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Pfam PF01568 Molydopterin dinucleotide binding domain 905 1009 1.0E-11 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 1.2E-16 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 2 1015 0.0 T 28-03-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 SUPERFAMILY SSF53706 35 851 5.89E-298 T 28-03-2018 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Pfam PF00384 Molybdopterin oxidoreductase 107 590 4.1E-34 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Gene3D G3DSA:2.40.40.20 841 1016 5.7E-35 T 28-03-2018 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Gene3D G3DSA:3.40.50.740 109 208 3.0E-18 T 28-03-2018 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 SMART SM00926 43 104 1.6E-20 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12565 d916fe1bb34b38cdb39177bf58ebaca9 1016 Gene3D G3DSA:3.40.50.740 485 661 2.1E-26 T 28-03-2018 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Gene3D G3DSA:3.30.70.240 392 549 1.6E-25 T 28-03-2018 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Gene3D G3DSA:2.40.30.10 188 287 2.0E-25 T 28-03-2018 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.0E-48 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 SUPERFAMILY SSF54980 399 493 2.69E-24 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.965 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 SUPERFAMILY SSF52540 2 234 4.83E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 182 2.1E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 170 1.3E-16 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Pfam PF00679 Elongation factor G C-terminus 399 482 3.8E-19 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Gene3D G3DSA:3.30.70.870 288 367 2.9E-27 T 28-03-2018 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Gene3D G3DSA:3.40.50.300 1 185 4.9E-37 T 28-03-2018 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 3.3E-301 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 SUPERFAMILY SSF54980 292 370 2.48E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site DDI_RS14280 1fb49275a33de6a5a7b7518788fdaeab 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.1E-10 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDI_RS15375 cd6a1825d30b34d96aa2f17815c046c1 135 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 134 34.682 T 28-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 DDI_RS15375 cd6a1825d30b34d96aa2f17815c046c1 135 Pfam PF16358 RcsF lipoprotein 29 133 2.1E-51 T 28-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 SUPERFAMILY SSF52518 356 545 3.4E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 Gene3D G3DSA:3.40.50.1220 182 333 3.2E-48 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 Gene3D G3DSA:3.40.50.970 1 181 7.0E-62 T 28-03-2018 DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 SUPERFAMILY SSF52518 1 175 5.65E-63 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 SUPERFAMILY SSF52467 182 342 1.47E-57 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 8.0E-213 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 2.9E-43 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.3E-49 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 165 4.4E-57 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDI_RS18945 09904bfd6e3b4a35bd29fbf77c66f527 548 Gene3D G3DSA:3.40.50.970 334 534 1.6E-50 T 28-03-2018 DDI_RS09000 652f16abaa29da22b9d587ab8a1ef2d4 135 SUPERFAMILY SSF81273 93 135 9.02E-12 T 28-03-2018 DDI_RS09000 652f16abaa29da22b9d587ab8a1ef2d4 135 PIRSF PIRSF002096 1 135 9.0E-57 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 DDI_RS09000 652f16abaa29da22b9d587ab8a1ef2d4 135 Pfam PF00816 H-NS histone family 32 127 3.1E-19 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 DDI_RS09000 652f16abaa29da22b9d587ab8a1ef2d4 135 SUPERFAMILY SSF81273 2 58 2.94E-18 T 28-03-2018 DDI_RS09000 652f16abaa29da22b9d587ab8a1ef2d4 135 SMART SM00528 87 135 2.9E-23 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 DDI_RS09000 652f16abaa29da22b9d587ab8a1ef2d4 135 Gene3D G3DSA:4.10.430.10 93 135 2.9E-18 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 DDI_RS09000 652f16abaa29da22b9d587ab8a1ef2d4 135 Gene3D G3DSA:1.10.287.1050 1 57 4.6E-26 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 Gene3D G3DSA:3.40.630.10 274 486 1.3E-14 T 28-03-2018 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 Gene3D G3DSA:3.40.630.10 1 273 3.1E-37 T 28-03-2018 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 SUPERFAMILY SSF53187 10 182 6.56E-65 T 28-03-2018 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 SUPERFAMILY SSF53187 398 483 6.56E-65 T 28-03-2018 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 Pfam PF01546 Peptidase family M20/M25/M40 278 481 3.5E-9 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 Pfam PF01546 Peptidase family M20/M25/M40 73 153 9.5E-11 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 364 382 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 429 445 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 451 473 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 7.0E-99 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 483 7.8E-179 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 PIRSF PIRSF016599 1 486 7.5E-207 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDI_RS15100 dba0f67cec9929b9f925aab8d2a20ad9 487 Pfam PF07687 Peptidase dimerisation domain 208 292 3.7E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS06475 439ed0b4e315bb54115afa58fef28218 277 SUPERFAMILY SSF52096 5 222 9.95E-33 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS06475 439ed0b4e315bb54115afa58fef28218 277 Gene3D G3DSA:3.90.226.10 2 275 6.3E-37 T 28-03-2018 DDI_RS06475 439ed0b4e315bb54115afa58fef28218 277 Pfam PF01039 Carboxyl transferase domain 11 231 7.3E-15 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 DDI_RS06475 439ed0b4e315bb54115afa58fef28218 277 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 5 274 9.1E-112 T 28-03-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 DDI_RS10625 6b0924813c77927415c71cb2bb75fe02 447 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 57 445 1.3E-159 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 DDI_RS10625 6b0924813c77927415c71cb2bb75fe02 447 Pfam PF04403 Paraquat-inducible protein A 292 446 2.2E-42 T 28-03-2018 IPR007498 Paraquat-inducible protein A DDI_RS10625 6b0924813c77927415c71cb2bb75fe02 447 Pfam PF04403 Paraquat-inducible protein A 97 247 1.2E-37 T 28-03-2018 IPR007498 Paraquat-inducible protein A DDI_RS17435 6c754863cdef0e85ce24ae2be2ac1f6c 436 Gene3D G3DSA:3.20.20.30 1 435 2.3E-96 T 28-03-2018 DDI_RS17435 6c754863cdef0e85ce24ae2be2ac1f6c 436 Pfam PF00296 Luciferase-like monooxygenase 9 366 8.4E-64 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS17435 6c754863cdef0e85ce24ae2be2ac1f6c 436 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 3 413 4.1E-164 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DDI_RS17435 6c754863cdef0e85ce24ae2be2ac1f6c 436 SUPERFAMILY SSF51679 5 420 7.46E-127 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS17435 6c754863cdef0e85ce24ae2be2ac1f6c 436 PIRSF PIRSF000337 1 429 4.4E-146 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DDI_RS11940 3739de370cfe4a8d2bcb3e8f8bed506e 301 Pfam PF05050 Methyltransferase FkbM domain 138 273 2.1E-9 T 28-03-2018 IPR006342 Methyltransferase FkbM DDI_RS11940 3739de370cfe4a8d2bcb3e8f8bed506e 301 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 129 257 1.4E-18 T 28-03-2018 IPR006342 Methyltransferase FkbM DDI_RS11940 3739de370cfe4a8d2bcb3e8f8bed506e 301 SUPERFAMILY SSF53335 9 296 8.46E-70 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS11940 3739de370cfe4a8d2bcb3e8f8bed506e 301 Gene3D G3DSA:3.40.50.150 113 297 3.1E-33 T 28-03-2018 DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 Gene3D G3DSA:3.40.640.10 96 342 2.7E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 Gene3D G3DSA:3.90.1150.10 343 442 5.9E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 SUPERFAMILY SSF53383 929 951 1.99E-98 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 SUPERFAMILY SSF53383 479 889 1.99E-98 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 Gene3D G3DSA:3.90.1150.10 775 907 4.7E-44 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 SUPERFAMILY SSF53383 17 440 1.87E-95 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 Gene3D G3DSA:3.40.640.10 528 774 2.4E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.578 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 4.0E-183 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DDI_RS02345 a62b83a3da993edc2b83a10f8016f682 957 Pfam PF02347 Glycine cleavage system P-protein 463 739 9.4E-10 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 SUPERFAMILY SSF51905 144 311 3.52E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 SUPERFAMILY SSF51905 424 608 1.1E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 520 538 1.0E-13 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 565 583 1.0E-13 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 678 700 1.0E-13 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 424 443 1.0E-13 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 651 667 1.0E-13 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 983 1044 7.4E-11 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 1055 1180 5.9E-18 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Pfam PF13806 Rieske-like [2Fe-2S] domain 1276 1384 1.1E-28 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:3.50.50.60 665 749 8.0E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:3.50.50.60 252 329 0.15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:3.30.413.10 1054 1237 1.5E-40 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 SUPERFAMILY SSF55124 925 1064 3.43E-27 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:2.102.10.10 1271 1395 4.4E-13 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 424 1222 0.0 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 288 3.2E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 424 711 1.3E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 SUPERFAMILY SSF50022 1275 1388 3.2E-25 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.0E-5 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 3.0E-5 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 SUPERFAMILY SSF51905 564 728 2.49E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 SUPERFAMILY SSF51905 2 188 3.82E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Pfam PF04324 BFD-like [2Fe-2S] binding domain 847 894 2.9E-10 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:3.50.50.60 409 521 3.5E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:3.50.50.60 1 99 1.8E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 1102 1118 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:3.90.480.10 894 1052 2.3E-8 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 1276 1384 3.5E-25 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:3.50.50.60 100 247 2.4E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 Gene3D G3DSA:3.50.50.60 522 660 2.8E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 SUPERFAMILY SSF56014 1056 1229 7.2E-51 T 28-03-2018 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00397 Sirohaem Fe-binding site signature 1102 1120 2.6E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS12485 f4d28975878220cf4af20233ecde6287 1399 PRINTS PR00397 Sirohaem Fe-binding site signature 1059 1077 2.6E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDI_RS06420 43def726a6bbdc4aed9a51557abf48c1 512 PIRSF PIRSF002741 16 504 1.6E-96 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS06420 43def726a6bbdc4aed9a51557abf48c1 512 SUPERFAMILY SSF53850 21 494 3.8E-123 T 28-03-2018 DDI_RS06420 43def726a6bbdc4aed9a51557abf48c1 512 Gene3D G3DSA:3.10.105.10 292 483 4.4E-49 T 28-03-2018 DDI_RS06420 43def726a6bbdc4aed9a51557abf48c1 512 Gene3D G3DSA:3.40.190.10 173 291 1.7E-34 T 28-03-2018 DDI_RS06420 43def726a6bbdc4aed9a51557abf48c1 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 63 428 3.4E-86 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS06420 43def726a6bbdc4aed9a51557abf48c1 512 Gene3D G3DSA:3.90.76.10 29 172 3.8E-32 T 28-03-2018 DDI_RS10690 e2e3879edcba3b7b8fd5e17e49cac3ae 153 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 127 1.2E-35 T 28-03-2018 IPR009678 Bacteriophage tail completion protein R DDI_RS06290 61c8413c7febd07bbee9575cb093ae58 363 Gene3D G3DSA:2.40.50.100 159 343 3.3E-9 T 28-03-2018 DDI_RS06290 61c8413c7febd07bbee9575cb093ae58 363 Gene3D G3DSA:2.40.50.100 59 115 5.1E-16 T 28-03-2018 DDI_RS06290 61c8413c7febd07bbee9575cb093ae58 363 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 357 6.5E-76 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS06290 61c8413c7febd07bbee9575cb093ae58 363 SUPERFAMILY SSF111369 49 275 1.31E-22 T 28-03-2018 DDI_RS06290 61c8413c7febd07bbee9575cb093ae58 363 Gene3D G3DSA:1.10.287.470 116 158 2.2E-8 T 28-03-2018 DDI_RS06290 61c8413c7febd07bbee9575cb093ae58 363 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 270 7.6E-23 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS21525 3563edaa15aa022c5c7518d739950fa3 257 SUPERFAMILY SSF55811 79 241 1.62E-41 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS21525 3563edaa15aa022c5c7518d739950fa3 257 Gene3D G3DSA:3.90.79.10 126 255 5.0E-36 T 28-03-2018 DDI_RS21525 3563edaa15aa022c5c7518d739950fa3 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 3.8E-9 T 28-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 DDI_RS21525 3563edaa15aa022c5c7518d739950fa3 257 Pfam PF00293 NUDIX domain 131 234 1.2E-16 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS21525 3563edaa15aa022c5c7518d739950fa3 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDI_RS21525 3563edaa15aa022c5c7518d739950fa3 257 SUPERFAMILY SSF55811 2 96 4.46E-31 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS21525 3563edaa15aa022c5c7518d739950fa3 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 44.969 T 28-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 DDI_RS02100 b3ef7024906e1169fb97c34b0965dee6 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.23 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 DDI_RS02100 b3ef7024906e1169fb97c34b0965dee6 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 3.0E-93 T 28-03-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 DDI_RS02100 b3ef7024906e1169fb97c34b0965dee6 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 6.8E-56 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DDI_RS02100 b3ef7024906e1169fb97c34b0965dee6 209 PIRSF PIRSF005461 1 209 2.0E-80 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 DDI_RS02100 b3ef7024906e1169fb97c34b0965dee6 209 Gene3D G3DSA:3.40.50.150 1 209 3.0E-58 T 28-03-2018 DDI_RS02100 b3ef7024906e1169fb97c34b0965dee6 209 SUPERFAMILY SSF53335 31 207 3.79E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS11080 d45f5ba4f52b57d497766775f4d4c49b 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS11080 d45f5ba4f52b57d497766775f4d4c49b 271 Pfam PF00005 ABC transporter 31 177 6.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS11080 d45f5ba4f52b57d497766775f4d4c49b 271 SMART SM00382 39 228 1.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11080 d45f5ba4f52b57d497766775f4d4c49b 271 SUPERFAMILY SSF52540 5 249 6.63E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11080 d45f5ba4f52b57d497766775f4d4c49b 271 Gene3D G3DSA:3.40.50.300 2 262 3.7E-64 T 28-03-2018 DDI_RS13160 9bbdd33cf9191fffc8ed803b437fe7f7 498 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS13160 9bbdd33cf9191fffc8ed803b437fe7f7 498 Pfam PF00437 Type II/IV secretion system protein 126 392 4.1E-91 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS13160 9bbdd33cf9191fffc8ed803b437fe7f7 498 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 15 495 1.9E-213 T 28-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 DDI_RS13160 9bbdd33cf9191fffc8ed803b437fe7f7 498 SUPERFAMILY SSF52540 111 495 4.17E-104 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13160 9bbdd33cf9191fffc8ed803b437fe7f7 498 SUPERFAMILY SSF160246 13 79 6.28E-16 T 28-03-2018 DDI_RS13160 9bbdd33cf9191fffc8ed803b437fe7f7 498 Gene3D G3DSA:3.40.50.300 226 498 2.9E-63 T 28-03-2018 DDI_RS13160 9bbdd33cf9191fffc8ed803b437fe7f7 498 SMART SM00382 253 376 3.2E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS13160 9bbdd33cf9191fffc8ed803b437fe7f7 498 Gene3D G3DSA:3.30.450.90 90 225 6.0E-48 T 28-03-2018 DDI_RS14230 e9e13d778d6475b2dd97fa4e9363ce11 282 Gene3D G3DSA:2.40.50.100 74 170 1.5E-10 T 28-03-2018 DDI_RS14230 e9e13d778d6475b2dd97fa4e9363ce11 282 ProSitePatterns PS00543 HlyD family secretion proteins signature. 246 268 - T 28-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 DDI_RS14230 e9e13d778d6475b2dd97fa4e9363ce11 282 Pfam PF13437 HlyD family secretion protein 134 249 1.7E-11 T 28-03-2018 DDI_RS14230 e9e13d778d6475b2dd97fa4e9363ce11 282 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 2.1E-8 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS14230 e9e13d778d6475b2dd97fa4e9363ce11 282 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 2.1E-8 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 Gene3D G3DSA:1.10.10.10 6 141 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 Pfam PF01047 MarR family 36 93 3.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 SMART SM00347 29 129 1.2E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 SUPERFAMILY SSF46785 10 140 6.0E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.6E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.6E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.6E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06770 6633c22896ffad65122a76c94863f1eb 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.6E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 SUPERFAMILY SSF54523 33 137 3.98E-38 T 28-03-2018 DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 Pfam PF08334 Type II secretion system (T2SS), protein G 30 136 1.3E-37 T 28-03-2018 IPR013545 Type II secretion system protein G DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 6 137 1.5E-57 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.3E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.0E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 2.6E-22 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 2.6E-22 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DDI_RS13150 95a0a94a88140be7d6210aa8064aea36 153 Gene3D G3DSA:3.30.700.10 21 136 4.5E-32 T 28-03-2018 DDI_RS03025 35e0b7bac9882bf8c1dcb0444e6e2f7a 226 SUPERFAMILY SSF46894 126 225 3.12E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS03025 35e0b7bac9882bf8c1dcb0444e6e2f7a 226 Gene3D G3DSA:3.40.50.2300 1 122 1.9E-34 T 28-03-2018 DDI_RS03025 35e0b7bac9882bf8c1dcb0444e6e2f7a 226 SUPERFAMILY SSF52172 1 122 7.68E-38 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS03025 35e0b7bac9882bf8c1dcb0444e6e2f7a 226 SMART SM00448 1 111 1.3E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS03025 35e0b7bac9882bf8c1dcb0444e6e2f7a 226 SMART SM00862 149 225 2.6E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS03025 35e0b7bac9882bf8c1dcb0444e6e2f7a 226 Pfam PF00072 Response regulator receiver domain 3 111 1.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS03025 35e0b7bac9882bf8c1dcb0444e6e2f7a 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 7.5E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS03025 35e0b7bac9882bf8c1dcb0444e6e2f7a 226 Gene3D G3DSA:1.10.10.10 123 226 1.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04015 564ab57b093169044c40ed28b7c4ae68 313 SUPERFAMILY SSF46785 3 111 9.19E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04015 564ab57b093169044c40ed28b7c4ae68 313 Gene3D G3DSA:3.40.190.10 179 276 3.9E-13 T 28-03-2018 DDI_RS04015 564ab57b093169044c40ed28b7c4ae68 313 Gene3D G3DSA:3.40.190.10 92 178 2.0E-19 T 28-03-2018 DDI_RS04015 564ab57b093169044c40ed28b7c4ae68 313 Pfam PF03466 LysR substrate binding domain 93 294 3.4E-31 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS04015 564ab57b093169044c40ed28b7c4ae68 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.6E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS04015 564ab57b093169044c40ed28b7c4ae68 313 SUPERFAMILY SSF53850 92 297 1.48E-33 T 28-03-2018 DDI_RS04015 564ab57b093169044c40ed28b7c4ae68 313 Gene3D G3DSA:1.10.10.10 1 91 8.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00435 d751e748bbc74bceafcf2735cbf85b9a 217 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 21 205 4.0E-73 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 DDI_RS00435 d751e748bbc74bceafcf2735cbf85b9a 217 Gene3D G3DSA:3.90.79.10 10 215 2.4E-42 T 28-03-2018 DDI_RS00435 d751e748bbc74bceafcf2735cbf85b9a 217 Pfam PF00293 NUDIX domain 64 150 2.0E-10 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS00435 d751e748bbc74bceafcf2735cbf85b9a 217 ProSitePatterns PS00893 Nudix box signature. 103 124 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDI_RS00435 d751e748bbc74bceafcf2735cbf85b9a 217 SUPERFAMILY SSF55811 18 212 1.76E-48 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 28-03-2018 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 3.7E-113 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 SUPERFAMILY SSF56553 53 178 1.06E-41 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 Gene3D G3DSA:3.30.1360.10 4 90 3.1E-19 T 28-03-2018 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 Gene3D G3DSA:3.30.1360.10 119 231 2.6E-28 T 28-03-2018 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.651 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 SMART SM00662 23 234 2.1E-105 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 Gene3D G3DSA:1.10.150.20 245 328 7.6E-29 T 28-03-2018 DDI_RS17970 61ccfaacc40e5cbeb402ff0ac6bb6c05 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.3E-23 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDI_RS16295 3cf3710e84d3cb2520dbc149413ac887 184 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 184 7.8E-53 T 28-03-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 DDI_RS16295 3cf3710e84d3cb2520dbc149413ac887 184 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 184 1.0E-61 T 28-03-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 DDI_RS20360 a9280a8e1390e01158d87a6355569f5b 680 SUPERFAMILY SSF55486 1 677 3.76E-212 T 28-03-2018 DDI_RS20360 a9280a8e1390e01158d87a6355569f5b 680 Pfam PF01432 Peptidase family M3 222 677 6.0E-170 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DDI_RS20360 a9280a8e1390e01158d87a6355569f5b 680 Gene3D G3DSA:1.10.1370.10 140 439 5.9E-59 T 28-03-2018 DDI_RS20360 a9280a8e1390e01158d87a6355569f5b 680 Gene3D G3DSA:1.10.1370.10 457 680 1.4E-69 T 28-03-2018 DDI_RS20360 a9280a8e1390e01158d87a6355569f5b 680 Gene3D G3DSA:1.20.1050.40 5 138 5.1E-38 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal DDI_RS14250 6724b8ecfde730a830d0a1340a49cf2d 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 1.3E-33 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 DDI_RS14250 6724b8ecfde730a830d0a1340a49cf2d 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 125 8.6E-51 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 DDI_RS14250 6724b8ecfde730a830d0a1340a49cf2d 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 25.146 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 DDI_RS14250 6724b8ecfde730a830d0a1340a49cf2d 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 3.7E-22 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS14250 6724b8ecfde730a830d0a1340a49cf2d 126 Gene3D G3DSA:3.90.470.20 1 126 6.1E-38 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS14250 6724b8ecfde730a830d0a1340a49cf2d 126 SUPERFAMILY SSF56214 3 125 1.15E-28 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS14250 6724b8ecfde730a830d0a1340a49cf2d 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 1.0E-30 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 SMART SM00283 267 514 2.0E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 Pfam PF02203 Tar ligand binding domain homologue 3 169 3.1E-14 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 Gene3D G3DSA:1.10.287.950 329 518 6.0E-47 T 28-03-2018 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 Gene3D G3DSA:1.10.287.1060 244 328 0.072 T 28-03-2018 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 Gene3D G3DSA:1.20.120.30 26 182 3.4E-20 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS07865 3d89d79800344940845201bd411ed03e 553 SUPERFAMILY SSF47170 53 172 5.49E-5 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 3.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 55 70 3.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 3.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 3.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 3.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 3.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 482 9.1E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07865 3d89d79800344940845201bd411ed03e 553 SUPERFAMILY SSF58104 236 515 2.35E-71 T 28-03-2018 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.1E-134 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 SUPERFAMILY SSF53067 1 309 2.47E-43 T 28-03-2018 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 4.3E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 4.3E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.3E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 4.3E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 4.3E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 4.3E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 Gene3D G3DSA:3.30.420.40 145 288 6.2E-18 T 28-03-2018 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 Pfam PF00814 Glycoprotease family 24 307 1.1E-100 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 2.0E-125 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 28-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.985 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS02030 e741bb6bcca0ab4ee554c361119e1fcc 337 Gene3D G3DSA:3.30.420.40 1 144 3.1E-41 T 28-03-2018 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 PRINTS PR01401 Mutator MutT protein signature 4 25 4.1E-7 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 PRINTS PR01401 Mutator MutT protein signature 79 92 4.1E-7 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 TIGRFAM TIGR00586 mutt: mutator mutT protein 3 129 5.4E-45 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 PRINTS PR00502 NUDIX hydrolase family signature 35 49 1.5E-10 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 PRINTS PR00502 NUDIX hydrolase family signature 49 64 1.5E-10 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 Pfam PF00293 NUDIX domain 9 128 8.2E-20 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 Gene3D G3DSA:3.90.79.10 4 133 8.5E-30 T 28-03-2018 DDI_RS16680 fc24d16fea27bb18af067ecaed439038 133 SUPERFAMILY SSF55811 4 128 3.66E-33 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS08250 af6f9a0d158f2f31ee1aed8745014efc 273 Gene3D G3DSA:3.90.25.10 159 271 8.1E-8 T 28-03-2018 DDI_RS08250 af6f9a0d158f2f31ee1aed8745014efc 273 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 212 4.8E-5 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS08250 af6f9a0d158f2f31ee1aed8745014efc 273 SUPERFAMILY SSF51735 1 265 7.89E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS08250 af6f9a0d158f2f31ee1aed8745014efc 273 Gene3D G3DSA:3.40.50.720 1 151 3.3E-15 T 28-03-2018 DDI_RS06390 fad1d00c82984c267eb581aeedd7b9f0 270 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06390 fad1d00c82984c267eb581aeedd7b9f0 270 SMART SM00382 38 219 1.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06390 fad1d00c82984c267eb581aeedd7b9f0 270 SUPERFAMILY SSF52540 12 244 7.84E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06390 fad1d00c82984c267eb581aeedd7b9f0 270 Gene3D G3DSA:3.40.50.300 6 252 3.7E-64 T 28-03-2018 DDI_RS06390 fad1d00c82984c267eb581aeedd7b9f0 270 Pfam PF00005 ABC transporter 30 168 1.4E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 SUPERFAMILY SSF53850 94 297 3.35E-40 T 28-03-2018 DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 Gene3D G3DSA:3.40.190.10 182 271 1.0E-21 T 28-03-2018 DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.0E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 Gene3D G3DSA:1.10.10.10 1 88 2.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 Pfam PF03466 LysR substrate binding domain 92 296 1.0E-42 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 SUPERFAMILY SSF46785 2 87 4.54E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20455 e7c95bda57058be3f4d8f13bfc055ddd 298 Gene3D G3DSA:3.40.190.10 92 181 2.3E-19 T 28-03-2018 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 Gene3D G3DSA:2.30.42.10 183 292 1.2E-17 T 28-03-2018 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 SUPERFAMILY SSF50156 199 290 3.29E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 SMART SM00228 211 280 2.5E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 SMART SM00228 115 186 0.18 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 Pfam PF02163 Peptidase family M50 10 439 2.0E-87 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 SUPERFAMILY SSF50156 86 175 3.55E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 451 1.5E-154 T 28-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 213 277 7.8E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS03760 be5ab906e4bf71507383beb6e654c4fe 451 Gene3D G3DSA:2.30.42.10 28 181 8.3E-10 T 28-03-2018 DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 Gene3D G3DSA:2.30.38.10 329 418 2.8E-12 T 28-03-2018 DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 Gene3D G3DSA:3.40.50.980 171 328 2.0E-35 T 28-03-2018 DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 Gene3D G3DSA:3.40.50.980 21 170 6.0E-38 T 28-03-2018 DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 Gene3D G3DSA:3.30.300.30 419 521 6.0E-23 T 28-03-2018 DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 SUPERFAMILY SSF56801 20 518 1.44E-120 T 28-03-2018 DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 Pfam PF00501 AMP-binding enzyme 31 425 1.0E-79 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 50 448 3.1E-101 T 28-03-2018 IPR010071 Amino acid adenylation domain DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 511 8.4E-9 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 PRINTS PR00154 AMP-binding signature 172 180 5.6E-5 T 28-03-2018 IPR020459 AMP-binding DDI_RS17700 b069fc9cc1e6203fba306cec0548d05c 522 PRINTS PR00154 AMP-binding signature 160 171 5.6E-5 T 28-03-2018 IPR020459 AMP-binding DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 TIGRFAM TIGR00260 thrC: threonine synthase 53 395 2.9E-116 T 28-03-2018 IPR004450 Threonine synthase-like DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 Gene3D G3DSA:3.40.50.1100 325 394 5.5E-12 T 28-03-2018 DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 Gene3D G3DSA:3.40.50.1100 197 324 5.5E-42 T 28-03-2018 DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 Gene3D G3DSA:3.40.50.1100 101 196 1.9E-19 T 28-03-2018 DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 SUPERFAMILY SSF53686 1 427 7.99E-131 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 Gene3D G3DSA:3.90.1380.10 1 81 5.6E-16 T 28-03-2018 IPR029144 Threonine synthase, N-terminal DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 365 2.1E-21 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DDI_RS17075 1f4239a149b1ef030e581a673d139b37 429 Pfam PF14821 Threonine synthase N terminus 8 80 2.4E-10 T 28-03-2018 IPR029144 Threonine synthase, N-terminal DDI_RS00245 dabc9872fc20036955034f4c1e6e0326 189 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.861 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DDI_RS00245 dabc9872fc20036955034f4c1e6e0326 189 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 184 9.0E-54 T 28-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related DDI_RS00245 dabc9872fc20036955034f4c1e6e0326 189 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 183 1.9E-55 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DDI_RS00245 dabc9872fc20036955034f4c1e6e0326 189 PIRSF PIRSF028513 1 187 1.9E-41 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DDI_RS17660 e08d0621f29c47604412b76d7bb486fd 267 Gene3D G3DSA:2.40.50.100 155 233 5.9E-4 T 28-03-2018 DDI_RS17660 e08d0621f29c47604412b76d7bb486fd 267 Gene3D G3DSA:2.40.50.100 59 154 8.8E-15 T 28-03-2018 DDI_RS17660 e08d0621f29c47604412b76d7bb486fd 267 SUPERFAMILY SSF111369 55 261 1.57E-24 T 28-03-2018 DDI_RS17660 e08d0621f29c47604412b76d7bb486fd 267 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 257 3.3E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS17660 e08d0621f29c47604412b76d7bb486fd 267 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 263 1.4E-40 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS21445 1444d3c0a17155fbf08a45478283300f 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 155 1.0E-4 T 28-03-2018 DDI_RS21445 1444d3c0a17155fbf08a45478283300f 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.675 T 28-03-2018 IPR022973 Ribosomal protein L10 DDI_RS21445 1444d3c0a17155fbf08a45478283300f 165 Pfam PF00466 Ribosomal protein L10 5 101 3.7E-25 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DDI_RS21445 1444d3c0a17155fbf08a45478283300f 165 SUPERFAMILY SSF160369 4 161 9.94E-48 T 28-03-2018 DDI_RS21445 1444d3c0a17155fbf08a45478283300f 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 28-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS16690 dfb1b60ce40ecbd0448726678a79fa42 166 PIRSF PIRSF004572 1 166 1.4E-67 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 DDI_RS16690 dfb1b60ce40ecbd0448726678a79fa42 166 Hamap MF_01332 Secretion monitor [secM]. 1 166 33.968 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 DDI_RS16690 dfb1b60ce40ecbd0448726678a79fa42 166 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 164 3.0E-42 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 DDI_RS16690 dfb1b60ce40ecbd0448726678a79fa42 166 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 165 1.0E-50 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 DDI_RS20140 a43a157d994cdb92837ecfc6aea4f8a3 437 SUPERFAMILY SSF52540 126 330 2.18E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20140 a43a157d994cdb92837ecfc6aea4f8a3 437 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 127 179 5.4E-8 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DDI_RS20140 a43a157d994cdb92837ecfc6aea4f8a3 437 Gene3D G3DSA:3.40.50.300 123 420 1.1E-26 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 5.6E-16 T 28-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Gene3D G3DSA:2.20.25.90 55 98 1.3E-28 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Pfam PF00384 Molybdopterin oxidoreductase 108 834 3.0E-175 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Gene3D G3DSA:3.40.50.740 651 792 1.1E-34 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Gene3D G3DSA:3.30.2070.10 797 837 2.8E-5 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1127 1154 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1237 0.0 T 28-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Gene3D G3DSA:3.40.228.10 225 650 1.9E-103 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Gene3D G3DSA:3.40.50.740 108 214 2.9E-6 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Gene3D G3DSA:2.40.40.20 1050 1240 1.5E-45 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 SUPERFAMILY SSF53706 4 1072 0.0 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Pfam PF01568 Molydopterin dinucleotide binding domain 1090 1202 6.3E-20 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 779 796 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 SUPERFAMILY SSF50692 1082 1236 6.78E-46 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 Gene3D G3DSA:4.10.1200.10 1 26 3.7E-13 T 28-03-2018 DDI_RS10570 5b8d00fdcd081b1b53af743728972791 1257 SMART SM00926 43 105 4.1E-8 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS20350 d727085485679443c9d6130d1e2dd8df 394 Gene3D G3DSA:1.20.1250.20 192 391 1.7E-21 T 28-03-2018 DDI_RS20350 d727085485679443c9d6130d1e2dd8df 394 Pfam PF07690 Major Facilitator Superfamily 14 215 5.2E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS20350 d727085485679443c9d6130d1e2dd8df 394 SUPERFAMILY SSF103473 6 381 2.75E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS20350 d727085485679443c9d6130d1e2dd8df 394 Gene3D G3DSA:1.20.1250.20 1 188 5.2E-25 T 28-03-2018 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 Pfam PF00367 phosphotransferase system, EIIB 10 43 9.3E-11 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 SUPERFAMILY SSF55604 8 81 7.32E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 Pfam PF02378 Phosphotransferase system, EIIC 110 390 5.2E-38 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 SUPERFAMILY SSF51261 469 619 1.92E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 476 599 2.2E-43 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 477 597 2.7E-39 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 539 551 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 5 621 2.2E-198 T 28-03-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 Gene3D G3DSA:3.30.1360.60 6 82 2.3E-25 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS15855 d7ca26ec8ddaf21b9c7e5d2d391209f4 626 Gene3D G3DSA:2.70.70.10 468 623 5.0E-50 T 28-03-2018 DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.1E-59 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 326 4.1E-44 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 553 1.0E-200 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 530 2.1E-49 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 SUPERFAMILY SSF52467 155 354 2.89E-57 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 SUPERFAMILY SSF52518 358 552 1.77E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 Gene3D G3DSA:3.40.50.970 1 192 2.2E-62 T 28-03-2018 DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 SUPERFAMILY SSF52518 1 179 1.28E-60 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 Gene3D G3DSA:3.40.50.1220 193 340 1.7E-52 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS16870 4ce816ff262467cc4cf6aaff55670ccd 554 Gene3D G3DSA:3.40.50.970 341 542 1.6E-52 T 28-03-2018 DDI_RS04030 dd312e1a45d6a41ba8ca4b422399320d 366 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 15 359 1.3E-17 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS04030 dd312e1a45d6a41ba8ca4b422399320d 366 SUPERFAMILY SSF51726 13 365 4.58E-63 T 28-03-2018 DDI_RS04030 dd312e1a45d6a41ba8ca4b422399320d 366 Gene3D G3DSA:3.20.20.210 5 365 1.3E-77 T 28-03-2018 DDI_RS09320 4d463bd13b5394fe310c5bda84ab931b 223 SUPERFAMILY SSF52540 1 206 1.42E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09320 4d463bd13b5394fe310c5bda84ab931b 223 PIRSF PIRSF006755 1 222 3.4E-64 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDI_RS09320 4d463bd13b5394fe310c5bda84ab931b 223 Gene3D G3DSA:3.40.50.300 2 214 9.2E-46 T 28-03-2018 DDI_RS09320 4d463bd13b5394fe310c5bda84ab931b 223 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 171 1.6E-39 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDI_RS09320 4d463bd13b5394fe310c5bda84ab931b 223 Pfam PF13500 AAA domain 4 206 6.3E-30 T 28-03-2018 DDI_RS09320 4d463bd13b5394fe310c5bda84ab931b 223 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 213 24.122 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDI_RS12660 b37093edf674ca8944d7c4ffa68c49c9 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 1.2E-82 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12660 b37093edf674ca8944d7c4ffa68c49c9 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 5.8E-137 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DDI_RS12660 b37093edf674ca8944d7c4ffa68c49c9 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.701 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 5.4E-51 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 SUPERFAMILY SSF51735 1 179 2.81E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 2.2E-183 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 Gene3D G3DSA:3.30.360.10 165 318 2.0E-49 T 28-03-2018 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 SUPERFAMILY SSF55347 155 317 1.73E-55 T 28-03-2018 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 PIRSF PIRSF000149 1 337 1.7E-129 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.171 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 SMART SM00846 3 155 1.0E-77 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 Gene3D G3DSA:3.40.50.720 1 164 1.7E-63 T 28-03-2018 DDI_RS17180 cf9a31baeaa946634782b0ce438dc2fb 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 3.2E-33 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS15930 87b42b316ed3c2bd24158ad313d0832a 330 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS15930 87b42b316ed3c2bd24158ad313d0832a 330 Gene3D G3DSA:3.40.50.300 1 257 5.5E-74 T 28-03-2018 DDI_RS15930 87b42b316ed3c2bd24158ad313d0832a 330 Pfam PF00005 ABC transporter 20 161 2.8E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS15930 87b42b316ed3c2bd24158ad313d0832a 330 SUPERFAMILY SSF50331 256 326 1.13E-6 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS15930 87b42b316ed3c2bd24158ad313d0832a 330 SUPERFAMILY SSF52540 4 241 3.06E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15930 87b42b316ed3c2bd24158ad313d0832a 330 Pfam PF08402 TOBE domain 257 322 4.5E-5 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS15930 87b42b316ed3c2bd24158ad313d0832a 330 SMART SM00382 28 211 2.9E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04440 f94856c13231d887c64d56953c33c761 629 SUPERFAMILY SSF54211 235 490 5.69E-102 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS04440 f94856c13231d887c64d56953c33c761 629 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 628 32.87 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 DDI_RS04440 f94856c13231d887c64d56953c33c761 629 SUPERFAMILY SSF55874 6 213 5.11E-66 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04440 f94856c13231d887c64d56953c33c761 629 Gene3D G3DSA:3.30.565.10 31 224 1.7E-52 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04440 f94856c13231d887c64d56953c33c761 629 SMART SM00387 29 186 2.4E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04440 f94856c13231d887c64d56953c33c761 629 PRINTS PR00775 90kDa heat shock protein signature 7 27 1.4E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal DDI_RS04440 f94856c13231d887c64d56953c33c761 629 PRINTS PR00775 90kDa heat shock protein signature 122 144 1.4E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal DDI_RS04440 f94856c13231d887c64d56953c33c761 629 PRINTS PR00775 90kDa heat shock protein signature 174 191 1.4E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal DDI_RS04440 f94856c13231d887c64d56953c33c761 629 PRINTS PR00775 90kDa heat shock protein signature 28 50 1.4E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal DDI_RS04440 f94856c13231d887c64d56953c33c761 629 PRINTS PR00775 90kDa heat shock protein signature 77 94 1.4E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal DDI_RS04440 f94856c13231d887c64d56953c33c761 629 PRINTS PR00775 90kDa heat shock protein signature 192 210 1.4E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal DDI_RS04440 f94856c13231d887c64d56953c33c761 629 PRINTS PR00775 90kDa heat shock protein signature 95 112 1.4E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal DDI_RS04440 f94856c13231d887c64d56953c33c761 629 PIRSF PIRSF002583 1 629 3.1E-220 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 DDI_RS04440 f94856c13231d887c64d56953c33c761 629 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 DDI_RS04440 f94856c13231d887c64d56953c33c761 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 6.4E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04440 f94856c13231d887c64d56953c33c761 629 Pfam PF00183 Hsp90 protein 224 628 1.7E-127 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 DDI_RS04440 f94856c13231d887c64d56953c33c761 629 SUPERFAMILY SSF110942 515 628 3.79E-35 T 28-03-2018 DDI_RS15015 86b393594e164aac6f5dd36c82725893 215 Gene3D G3DSA:3.30.70.1210 95 208 5.7E-24 T 28-03-2018 DDI_RS15015 86b393594e164aac6f5dd36c82725893 215 Gene3D G3DSA:3.30.70.1200 1 89 7.6E-6 T 28-03-2018 DDI_RS15015 86b393594e164aac6f5dd36c82725893 215 SMART SM01101 4 208 4.0E-42 T 28-03-2018 IPR010179 CRISPR-associated protein Cse3 DDI_RS15015 86b393594e164aac6f5dd36c82725893 215 SUPERFAMILY SSF117987 96 208 1.31E-26 T 28-03-2018 DDI_RS15015 86b393594e164aac6f5dd36c82725893 215 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 5 208 1.0E-44 T 28-03-2018 IPR010179 CRISPR-associated protein Cse3 DDI_RS15015 86b393594e164aac6f5dd36c82725893 215 Pfam PF08798 CRISPR associated protein 6 208 1.5E-35 T 28-03-2018 IPR010179 CRISPR-associated protein Cse3 DDI_RS08575 d1ef60acf9ea7b6684a2479ebefd0c18 145 Gene3D G3DSA:3.10.450.40 1 133 1.2E-31 T 28-03-2018 DDI_RS08575 d1ef60acf9ea7b6684a2479ebefd0c18 145 SUPERFAMILY SSF160719 24 131 5.23E-23 T 28-03-2018 DDI_RS08575 d1ef60acf9ea7b6684a2479ebefd0c18 145 Pfam PF04965 Gene 25-like lysozyme 28 118 5.6E-17 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DDI_RS10795 d8ac7cb9ccd0beac7c131c3ab114a773 438 Pfam PF01979 Amidohydrolase family 68 429 5.1E-72 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 DDI_RS10795 d8ac7cb9ccd0beac7c131c3ab114a773 438 SUPERFAMILY SSF51556 70 373 2.04E-101 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS10795 d8ac7cb9ccd0beac7c131c3ab114a773 438 SUPERFAMILY SSF51338 372 433 4.73E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS10795 d8ac7cb9ccd0beac7c131c3ab114a773 438 SUPERFAMILY SSF51338 27 70 4.73E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS10795 d8ac7cb9ccd0beac7c131c3ab114a773 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 27 426 5.1E-185 T 28-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 DDI_RS10795 d8ac7cb9ccd0beac7c131c3ab114a773 438 Gene3D G3DSA:2.30.40.10 2 81 6.7E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS10795 d8ac7cb9ccd0beac7c131c3ab114a773 438 Gene3D G3DSA:3.20.20.140 82 372 1.9E-74 T 28-03-2018 DDI_RS12190 ee47c58bd007504711f95b737ea417b5 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 9.5E-41 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 DDI_RS12190 ee47c58bd007504711f95b737ea417b5 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 29.478 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 DDI_RS12190 ee47c58bd007504711f95b737ea417b5 116 Gene3D G3DSA:1.10.4000.10 3 102 1.9E-45 T 28-03-2018 DDI_RS12190 ee47c58bd007504711f95b737ea417b5 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 94 3.0E-42 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 DDI_RS12190 ee47c58bd007504711f95b737ea417b5 116 SUPERFAMILY SSF63592 1 98 2.48E-39 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 DDI_RS21110 ceee818b17b6081967aed7b81cda098a 263 Pfam PF00535 Glycosyl transferase family 2 7 143 2.4E-14 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS21110 ceee818b17b6081967aed7b81cda098a 263 SUPERFAMILY SSF53448 2 142 4.5E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS21110 ceee818b17b6081967aed7b81cda098a 263 Gene3D G3DSA:3.90.550.10 2 230 2.6E-20 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 SUPERFAMILY SSF75615 114 208 2.09E-28 T 28-03-2018 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Pfam PF10414 Sirohaem synthase dimerisation region 150 206 3.5E-21 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 6.4E-91 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Gene3D G3DSA:3.40.1010.10 214 339 2.9E-37 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.818 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Gene3D G3DSA:3.30.950.10 340 464 5.5E-37 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Gene3D G3DSA:1.10.8.210 151 208 5.8E-22 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 5.2E-79 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 PIRSF PIRSF036426 1 464 1.7E-205 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 SUPERFAMILY SSF51735 2 113 2.42E-25 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Pfam PF13241 Putative NAD(P)-binding 6 115 1.5E-28 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 6.1E-50 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Gene3D G3DSA:3.40.50.720 3 120 6.5E-22 T 28-03-2018 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 1.0E-8 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 SUPERFAMILY SSF53790 210 454 1.57E-80 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS15445 4251f9ab605bb2feec0689cb6535912b 473 Gene3D G3DSA:3.30.160.110 121 148 4.6E-16 T 28-03-2018 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 Gene3D G3DSA:2.40.50.140 557 643 4.4E-7 T 28-03-2018 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 Pfam PF08206 Ribonuclease B OB domain 24 80 1.3E-17 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 640 1.3E-226 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 ProSitePatterns PS01175 Ribonuclease II family signature. 483 507 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 SMART SM00357 23 79 3.0E-13 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 SUPERFAMILY SSF50249 8 80 1.86E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 642 45.239 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 SUPERFAMILY SSF50249 83 171 2.91E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 SUPERFAMILY SSF50249 559 641 4.86E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 SMART SM00955 189 516 1.2E-126 T 28-03-2018 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 Pfam PF00773 RNB domain 189 515 3.9E-84 T 28-03-2018 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 641 0.0 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 SUPERFAMILY SSF50249 175 555 2.57E-115 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 Pfam PF00575 S1 RNA binding domain 558 638 3.8E-11 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS11100 92d8fe2c1e2080bdbf33888031011dab 643 SMART SM00316 558 642 0.0047 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 4.4E-78 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 4.1E-30 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 8.5E-115 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 Gene3D G3DSA:3.30.470.20 214 360 6.9E-46 T 28-03-2018 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 PIRSF PIRSF039102 1 359 3.7E-133 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 Gene3D G3DSA:3.40.50.20 1 150 1.8E-44 T 28-03-2018 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 Gene3D G3DSA:3.30.1490.20 155 213 1.9E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 SUPERFAMILY SSF52440 3 139 1.53E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 SUPERFAMILY SSF56059 140 357 3.71E-63 T 28-03-2018 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.803 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS02750 e8f6da0696503d3e784dc3f785dc6a93 366 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS06515 e2c557a6d619368f044bbefda4ce3f65 298 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06515 e2c557a6d619368f044bbefda4ce3f65 298 SMART SM00382 35 221 3.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06515 e2c557a6d619368f044bbefda4ce3f65 298 Gene3D G3DSA:3.40.50.300 6 297 5.8E-57 T 28-03-2018 DDI_RS06515 e2c557a6d619368f044bbefda4ce3f65 298 Pfam PF00005 ABC transporter 27 173 3.0E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06515 e2c557a6d619368f044bbefda4ce3f65 298 SUPERFAMILY SSF52540 7 238 4.51E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16505 f815dd328fe762cfcd5ebb59180ff41d 284 SUPERFAMILY SSF81345 14 270 1.28E-20 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS16505 f815dd328fe762cfcd5ebb59180ff41d 284 Pfam PF00950 ABC 3 transport family 14 273 1.2E-51 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DDI_RS16505 f815dd328fe762cfcd5ebb59180ff41d 284 Gene3D G3DSA:1.10.3470.10 13 275 2.2E-18 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS09565 664df71c499c245d652149249e728ad5 179 SUPERFAMILY SSF53155 6 92 1.29E-9 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DDI_RS09565 664df71c499c245d652149249e728ad5 179 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DDI_RS09565 664df71c499c245d652149249e728ad5 179 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 167 39.55 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DDI_RS09565 664df71c499c245d652149249e728ad5 179 SUPERFAMILY SSF46767 86 168 2.75E-33 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DDI_RS09565 664df71c499c245d652149249e728ad5 179 Gene3D G3DSA:1.10.10.10 83 169 1.8E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09565 664df71c499c245d652149249e728ad5 179 Gene3D G3DSA:3.30.160.70 1 82 3.9E-6 T 28-03-2018 DDI_RS09565 664df71c499c245d652149249e728ad5 179 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 6.7E-35 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DDI_RS09565 664df71c499c245d652149249e728ad5 179 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 4.4E-37 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DDI_RS09565 664df71c499c245d652149249e728ad5 179 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 8 83 2.2E-6 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DDI_RS08485 affd05308b0b8f893e75c1af3cdace98 192 Pfam PF02613 Nitrate reductase delta subunit 36 146 2.0E-11 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS08485 affd05308b0b8f893e75c1af3cdace98 192 PIRSF PIRSF004690 1 185 6.1E-55 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type DDI_RS08485 affd05308b0b8f893e75c1af3cdace98 192 Gene3D G3DSA:1.10.3480.10 1 186 2.0E-35 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS08485 affd05308b0b8f893e75c1af3cdace98 192 SUPERFAMILY SSF89155 2 179 1.96E-44 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS13235 98799ecd86faf7b8be37a231e97dc3e8 423 Gene3D G3DSA:2.40.170.10 31 423 8.3E-116 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS13235 98799ecd86faf7b8be37a231e97dc3e8 423 Hamap MF_01301 Maltoporin [lamB]. 2 423 42.712 T 28-03-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 DDI_RS13235 98799ecd86faf7b8be37a231e97dc3e8 423 SUPERFAMILY SSF56935 31 423 8.55E-105 T 28-03-2018 DDI_RS13235 98799ecd86faf7b8be37a231e97dc3e8 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 38 418 2.0E-169 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS13235 98799ecd86faf7b8be37a231e97dc3e8 423 Pfam PF02264 LamB porin 33 423 4.6E-109 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS15935 ad329c45a6bd9567cc1c783dba8d61a7 260 Gene3D G3DSA:1.10.3720.10 8 259 6.3E-38 T 28-03-2018 DDI_RS15935 ad329c45a6bd9567cc1c783dba8d61a7 260 SUPERFAMILY SSF161098 6 258 8.22E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15935 ad329c45a6bd9567cc1c783dba8d61a7 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 258 2.0E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS16070 b2ddb0c5d886c696b7df1056f89b96fe 70 Gene3D G3DSA:3.10.350.10 1 67 1.5E-4 T 28-03-2018 DDI_RS16070 b2ddb0c5d886c696b7df1056f89b96fe 70 Pfam PF05489 Phage Tail Protein X 7 57 2.4E-15 T 28-03-2018 IPR008861 Phage Tail Protein X-like DDI_RS16590 521701a1bad3a9c7bb683c702ce02f86 396 Pfam PF12715 Abhydrolase family 62 342 5.4E-18 T 28-03-2018 IPR025890 Abhydrolase, bacterial DDI_RS16590 521701a1bad3a9c7bb683c702ce02f86 396 SUPERFAMILY SSF53474 167 386 1.95E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS16590 521701a1bad3a9c7bb683c702ce02f86 396 SUPERFAMILY SSF53474 52 140 1.95E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS16590 521701a1bad3a9c7bb683c702ce02f86 396 Gene3D G3DSA:3.40.50.1820 80 391 1.8E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS02760 c99e0baedfb450f645ef4cb5d6b300ea 503 Pfam PF00171 Aldehyde dehydrogenase family 17 480 5.6E-139 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS02760 c99e0baedfb450f645ef4cb5d6b300ea 503 Gene3D G3DSA:3.40.309.10 263 462 1.5E-63 T 28-03-2018 DDI_RS02760 c99e0baedfb450f645ef4cb5d6b300ea 503 SUPERFAMILY SSF53720 2 484 1.83E-149 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS02760 c99e0baedfb450f645ef4cb5d6b300ea 503 Gene3D G3DSA:3.40.605.10 1 262 4.1E-84 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS02760 c99e0baedfb450f645ef4cb5d6b300ea 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 DDI_RS02760 c99e0baedfb450f645ef4cb5d6b300ea 503 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 484 3.5E-205 T 28-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 DDI_RS20915 f818e7df955e5d2ce4c8b840ce7d2317 531 Gene3D G3DSA:3.10.105.10 302 503 1.2E-41 T 28-03-2018 DDI_RS20915 f818e7df955e5d2ce4c8b840ce7d2317 531 SUPERFAMILY SSF53850 31 528 5.07E-106 T 28-03-2018 DDI_RS20915 f818e7df955e5d2ce4c8b840ce7d2317 531 Gene3D G3DSA:3.40.190.10 161 301 8.7E-27 T 28-03-2018 DDI_RS20915 f818e7df955e5d2ce4c8b840ce7d2317 531 Gene3D G3DSA:3.90.76.10 53 160 2.8E-23 T 28-03-2018 DDI_RS20915 f818e7df955e5d2ce4c8b840ce7d2317 531 PIRSF PIRSF002741 29 529 7.9E-80 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS20915 f818e7df955e5d2ce4c8b840ce7d2317 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 443 4.0E-75 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS15835 69f4345f9079fd6bc307c550e9ac427d 415 Pfam PF07690 Major Facilitator Superfamily 20 342 5.8E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS15835 69f4345f9079fd6bc307c550e9ac427d 415 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 38.853 T 28-03-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 DDI_RS15835 69f4345f9079fd6bc307c550e9ac427d 415 Gene3D G3DSA:1.20.1250.20 202 413 9.0E-10 T 28-03-2018 DDI_RS15835 69f4345f9079fd6bc307c550e9ac427d 415 Gene3D G3DSA:1.20.1250.20 1 195 3.8E-15 T 28-03-2018 DDI_RS15835 69f4345f9079fd6bc307c550e9ac427d 415 SUPERFAMILY SSF103473 18 395 1.57E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS05070 496b55b575e86867aabdf84262eb1515 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 2.2E-69 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DDI_RS05070 496b55b575e86867aabdf84262eb1515 247 Gene3D G3DSA:3.40.1390.30 110 218 1.4E-29 T 28-03-2018 DDI_RS05070 496b55b575e86867aabdf84262eb1515 247 SUPERFAMILY SSF102705 1 246 1.96E-82 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DDI_RS05070 496b55b575e86867aabdf84262eb1515 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 233 2.9E-57 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DDI_RS05070 496b55b575e86867aabdf84262eb1515 247 Gene3D G3DSA:3.40.1390.30 1 109 3.9E-26 T 28-03-2018 DDI_RS11570 36815bc216691fc63340eab9248b440d 483 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 3 470 44.575 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 DDI_RS11570 36815bc216691fc63340eab9248b440d 483 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 5 453 1.7E-155 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 DDI_RS11835 581324e217a8d7760b8334f46cc90d57 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 337 9.9E-66 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDI_RS11835 581324e217a8d7760b8334f46cc90d57 365 Gene3D G3DSA:3.20.20.70 1 359 9.8E-118 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS11835 581324e217a8d7760b8334f46cc90d57 365 SUPERFAMILY SSF51395 1 361 1.21E-113 T 28-03-2018 DDI_RS15380 76b4d5cacdd02b163434a1e2ad860065 235 SUPERFAMILY SSF118196 1 230 6.8E-83 T 28-03-2018 IPR023370 TsaA-like domain DDI_RS15380 76b4d5cacdd02b163434a1e2ad860065 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 2.4E-39 T 28-03-2018 IPR023370 TsaA-like domain DDI_RS15380 76b4d5cacdd02b163434a1e2ad860065 235 Gene3D G3DSA:2.40.30.70 5 149 1.8E-51 T 28-03-2018 IPR023370 TsaA-like domain DDI_RS15380 76b4d5cacdd02b163434a1e2ad860065 235 Gene3D G3DSA:3.30.2310.10 150 231 3.0E-24 T 28-03-2018 DDI_RS15380 76b4d5cacdd02b163434a1e2ad860065 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 28-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site DDI_RS15380 76b4d5cacdd02b163434a1e2ad860065 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 2.9E-56 T 28-03-2018 IPR023370 TsaA-like domain DDI_RS17420 b28513d6c5844579d568da19eaf7700f 304 SUPERFAMILY SSF103481 39 140 1.03E-14 T 28-03-2018 DDI_RS17420 b28513d6c5844579d568da19eaf7700f 304 Pfam PF00892 EamA-like transporter family 160 288 9.9E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS17420 b28513d6c5844579d568da19eaf7700f 304 Pfam PF00892 EamA-like transporter family 5 138 2.4E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS17420 b28513d6c5844579d568da19eaf7700f 304 SUPERFAMILY SSF103481 195 294 3.79E-11 T 28-03-2018 DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 Gene3D G3DSA:3.40.50.300 471 621 1.1E-11 T 28-03-2018 DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 258 616 5.7E-57 T 28-03-2018 IPR006474 Helicase Cas3, CRISPR-associated, core DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 Pfam PF00270 DEAD/DEAH box helicase 244 425 1.5E-8 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 SMART SM00487 236 460 0.0011 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 Gene3D G3DSA:1.10.3210.10 12 188 3.0E-7 T 28-03-2018 DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 SMART SM00490 509 598 6.1E-4 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 SUPERFAMILY SSF52540 252 305 1.7E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 SUPERFAMILY SSF52540 459 599 1.7E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 SUPERFAMILY SSF52540 338 426 1.7E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15000 0b84641586574312df36383cbdf59cd0 854 Gene3D G3DSA:3.40.50.300 197 442 8.8E-19 T 28-03-2018 DDI_RS09785 be5f42bde050eeec0cdf64ee2e25a631 230 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 228 1.2E-67 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DDI_RS09785 be5f42bde050eeec0cdf64ee2e25a631 230 Gene3D G3DSA:2.160.20.70 109 230 3.2E-29 T 28-03-2018 DDI_RS09785 be5f42bde050eeec0cdf64ee2e25a631 230 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 124 215 4.3E-29 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 DDI_RS09785 be5f42bde050eeec0cdf64ee2e25a631 230 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 101 1.7E-32 T 28-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 DDI_RS09785 be5f42bde050eeec0cdf64ee2e25a631 230 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 230 27.79 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DDI_RS09785 be5f42bde050eeec0cdf64ee2e25a631 230 SUPERFAMILY SSF63848 122 210 3.27E-29 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 DDI_RS12590 294be085422ce317f5fff724055696e8 342 SUPERFAMILY SSF56042 168 336 2.09E-42 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS12590 294be085422ce317f5fff724055696e8 342 PIRSF PIRSF005644 6 342 4.4E-121 T 28-03-2018 IPR011854 Hydrogenase expression/formation protein HypE DDI_RS12590 294be085422ce317f5fff724055696e8 342 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 10 342 4.1E-136 T 28-03-2018 IPR011854 Hydrogenase expression/formation protein HypE DDI_RS12590 294be085422ce317f5fff724055696e8 342 Gene3D G3DSA:3.30.1330.10 6 162 7.0E-25 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS12590 294be085422ce317f5fff724055696e8 342 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 159 3.2E-16 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS12590 294be085422ce317f5fff724055696e8 342 SUPERFAMILY SSF55326 9 162 2.62E-32 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS12590 294be085422ce317f5fff724055696e8 342 Gene3D G3DSA:3.90.650.10 167 330 1.9E-37 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS12590 294be085422ce317f5fff724055696e8 342 Pfam PF02769 AIR synthase related protein, C-terminal domain 171 319 3.6E-27 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 PIRSF PIRSF006288 26 892 0.0 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 SUPERFAMILY SSF81593 203 328 2.82E-9 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Gene3D G3DSA:3.30.70.260 698 784 2.5E-10 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Pfam PF01966 HD domain 469 601 6.5E-14 T 28-03-2018 IPR006674 HD domain DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 SUPERFAMILY SSF81301 50 190 5.09E-24 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 SMART SM00471 465 612 6.2E-10 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Pfam PF01909 Nucleotidyltransferase domain 85 117 1.5E-5 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Gene3D G3DSA:1.20.120.330 192 335 2.6E-24 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Gene3D G3DSA:3.30.70.260 810 891 2.2E-10 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 48 885 5.0E-303 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 SUPERFAMILY SSF55021 814 866 3.54E-8 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 SUPERFAMILY SSF81891 425 470 1.79E-8 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 SUPERFAMILY SSF81891 505 649 1.79E-8 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 SUPERFAMILY SSF109604 458 559 5.02E-13 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 893 347.883 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Gene3D G3DSA:1.10.3090.10 364 650 6.4E-36 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Gene3D G3DSA:3.30.460.10 33 188 1.7E-22 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Pfam PF01842 ACT domain 819 865 4.4E-7 T 28-03-2018 IPR002912 ACT domain DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Pfam PF01842 ACT domain 710 762 1.5E-7 T 28-03-2018 IPR002912 ACT domain DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 SUPERFAMILY SSF55021 707 766 7.5E-9 T 28-03-2018 DDI_RS03715 1c01f7a5f961f7a01102a658aa392b03 893 Pfam PF08335 GlnD PII-uridylyltransferase 194 332 4.1E-37 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 SMART SM00861 593 786 1.8E-61 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 PIRSF PIRSF000157 1 934 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 Gene3D G3DSA:1.10.287.1150 84 166 1.4E-22 T 28-03-2018 DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 SUPERFAMILY SSF52518 576 793 3.43E-52 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 Gene3D G3DSA:3.40.50.970 589 799 6.6E-57 T 28-03-2018 DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 Pfam PF00676 Dehydrogenase E1 component 219 509 3.1E-49 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 SUPERFAMILY SSF52518 121 550 7.2E-88 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 3.4E-54 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 2.8E-65 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 9.0E-16 T 28-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DDI_RS05115 85db9fd1d5974e136bda9da55d1ca376 935 Gene3D G3DSA:3.40.50.970 167 519 1.8E-92 T 28-03-2018 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Pfam PF09078 CheY binding 163 225 1.7E-25 T 28-03-2018 IPR015162 CheY binding DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SMART SM01231 281 344 1.0E-20 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 528 2.4E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Pfam PF01627 Hpt domain 7 102 2.1E-19 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 283 344 3.5E-17 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SMART SM00387 389 529 1.1E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Gene3D G3DSA:1.20.120.160 1 144 8.1E-33 T 28-03-2018 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SMART SM00260 521 661 1.3E-41 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Gene3D G3DSA:1.10.287.560 281 345 1.4E-19 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SUPERFAMILY SSF50341 528 660 5.49E-31 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SMART SM00073 3 100 1.8E-30 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SUPERFAMILY SSF55052 162 226 2.01E-20 T 28-03-2018 IPR015162 CheY binding DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Gene3D G3DSA:3.30.70.400 161 226 1.9E-26 T 28-03-2018 IPR015162 CheY binding DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Gene3D G3DSA:2.30.30.40 616 660 5.1E-21 T 28-03-2018 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Pfam PF01584 CheW-like domain 534 660 4.9E-26 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SUPERFAMILY SSF55874 347 527 5.89E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Gene3D G3DSA:3.30.565.10 347 538 1.8E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SUPERFAMILY SSF47226 3 124 2.0E-31 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 SUPERFAMILY SSF47384 282 345 3.53E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 4.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 4.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 4.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS12170 b3e84f0ce70013997c3b08711455a020 674 Gene3D G3DSA:2.40.50.180 545 615 6.1E-12 T 28-03-2018 DDI_RS01725 8e9906d45449d3de84e0da45e45dd5c2 155 PIRSF PIRSF034445 1 147 1.1E-28 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 DDI_RS01725 8e9906d45449d3de84e0da45e45dd5c2 155 Pfam PF07813 LTXXQ motif family protein 46 139 4.2E-22 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 DDI_RS17690 f6fb0035f85422da5e8792e6cc0bf0cc 319 TIGRFAM TIGR01762 chlorin-enz: chlorinating enzyme 6 298 1.3E-134 T 28-03-2018 IPR010092 Chlorinating enzyme DDI_RS17690 f6fb0035f85422da5e8792e6cc0bf0cc 319 SUPERFAMILY SSF51197 6 301 5.22E-57 T 28-03-2018 DDI_RS17690 f6fb0035f85422da5e8792e6cc0bf0cc 319 Gene3D G3DSA:2.60.120.620 2 264 6.9E-38 T 28-03-2018 DDI_RS17690 f6fb0035f85422da5e8792e6cc0bf0cc 319 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 15 250 2.0E-41 T 28-03-2018 IPR008775 Phytanoyl-CoA dioxygenase DDI_RS21045 afa41b7a8eb3b514957c8067282241db 335 PIRSF PIRSF026760 3 334 5.1E-97 T 28-03-2018 IPR011669 Uncharacterised conserved protein UCP026760 DDI_RS21045 afa41b7a8eb3b514957c8067282241db 335 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 327 2.6E-72 T 28-03-2018 IPR035086 Domain of unknown function DUF1611, P-loop DDI_RS21045 afa41b7a8eb3b514957c8067282241db 335 Gene3D G3DSA:3.40.50.720 3 126 1.6E-31 T 28-03-2018 DDI_RS21045 afa41b7a8eb3b514957c8067282241db 335 Gene3D G3DSA:3.40.50.300 128 320 1.8E-37 T 28-03-2018 DDI_RS21045 afa41b7a8eb3b514957c8067282241db 335 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 49 124 4.8E-24 T 28-03-2018 IPR035402 Domain of unknown function DUF1611_N, Rossmann-like domain DDI_RS21045 afa41b7a8eb3b514957c8067282241db 335 SUPERFAMILY SSF52540 3 331 1.45E-102 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13320 488fef8ebe8c32c7ae2c5bb32dc66892 518 Gene3D G3DSA:1.10.275.10 7 200 3.8E-67 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal DDI_RS13320 488fef8ebe8c32c7ae2c5bb32dc66892 518 SUPERFAMILY SSF48557 6 505 6.91E-184 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 DDI_RS13320 488fef8ebe8c32c7ae2c5bb32dc66892 518 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 10 503 2.5E-206 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13320 488fef8ebe8c32c7ae2c5bb32dc66892 518 Pfam PF00221 Aromatic amino acid lyase 15 471 1.6E-180 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 DDI_RS13320 488fef8ebe8c32c7ae2c5bb32dc66892 518 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 6 506 42.867 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13320 488fef8ebe8c32c7ae2c5bb32dc66892 518 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 142 158 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 DDI_RS13320 488fef8ebe8c32c7ae2c5bb32dc66892 518 Gene3D G3DSA:1.20.200.10 202 513 3.0E-119 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 SUPERFAMILY SSF82693 43 137 3.66E-19 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 SUPERFAMILY SSF82693 551 638 7.32E-7 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 SUPERFAMILY SSF82714 188 268 5.23E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 Gene3D G3DSA:3.30.2090.10 184 270 1.1E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 Gene3D G3DSA:3.30.2090.10 702 792 7.7E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 Gene3D G3DSA:1.20.1640.10 298 506 1.2E-27 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 Gene3D G3DSA:3.30.70.1430 552 652 3.9E-10 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 Gene3D G3DSA:3.30.70.1430 43 147 3.7E-30 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 SUPERFAMILY SSF82714 705 789 3.14E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 Gene3D G3DSA:1.20.1640.10 810 1008 4.5E-30 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 SUPERFAMILY SSF82693 140 185 1.57E-17 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 SUPERFAMILY SSF82693 271 326 1.57E-17 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 Pfam PF00873 AcrB/AcrD/AcrF family 7 1004 6.2E-158 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 2.8E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 2.8E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 2.8E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 2.8E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 2.8E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 SUPERFAMILY SSF82866 788 1009 3.66E-42 T 28-03-2018 DDI_RS06295 b2dfea99860884a52704dd39d1830c49 1016 SUPERFAMILY SSF82866 302 491 3.14E-31 T 28-03-2018 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 Gene3D G3DSA:3.30.1360.120 3 133 7.6E-33 T 28-03-2018 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 3.6E-19 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.457 T 28-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 PIRSF PIRSF006487 1 365 6.8E-80 T 28-03-2018 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 SUPERFAMILY SSF101790 271 361 1.32E-25 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 Gene3D G3DSA:3.30.1360.120 134 231 1.6E-22 T 28-03-2018 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 SUPERFAMILY SSF103025 4 277 4.08E-88 T 28-03-2018 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 1.3E-80 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 Gene3D G3DSA:2.40.30.110 277 365 2.3E-19 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 359 5.6E-152 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DDI_RS02335 00424ee4a65aa1d8a571220cf4a53059 366 Gene3D G3DSA:4.10.1250.10 232 275 1.9E-15 T 28-03-2018 DDI_RS18310 b36d1463f69905887270c693c6a0642c 429 Gene3D G3DSA:3.30.450.20 34 192 1.7E-15 T 28-03-2018 DDI_RS18310 b36d1463f69905887270c693c6a0642c 429 SUPERFAMILY SSF103190 74 194 7.32E-6 T 28-03-2018 IPR029151 Periplasmic sensor domain-like DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 SUPERFAMILY SSF52540 254 577 2.59E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 25 189 1.3E-26 T 28-03-2018 IPR006483 CRISPR-associated Cas3-HD domain DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 SMART SM00487 228 446 1.1E-4 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 Pfam PF00270 DEAD/DEAH box helicase 256 406 5.3E-11 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 SMART SM00471 21 360 0.0077 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 Pfam PF01966 HD domain 27 122 4.2E-5 T 28-03-2018 IPR006674 HD domain DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 Gene3D G3DSA:3.40.50.300 446 599 2.3E-9 T 28-03-2018 DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 Gene3D G3DSA:1.10.3210.10 16 206 1.8E-9 T 28-03-2018 DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 Gene3D G3DSA:3.40.50.300 234 413 1.6E-17 T 28-03-2018 DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 SUPERFAMILY SSF109604 24 123 1.88E-7 T 28-03-2018 DDI_RS06105 1cd39818a9b399b6d7321770ff244ae7 753 SUPERFAMILY SSF109604 176 235 1.88E-7 T 28-03-2018 DDI_RS09050 b398cd44b8e09c85c0cfa4f74dd09b55 107 PIRSF PIRSF004916 1 107 7.9E-56 T 28-03-2018 IPR007376 dsDNA mimic, putative DDI_RS09050 b398cd44b8e09c85c0cfa4f74dd09b55 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 7.0E-51 T 28-03-2018 IPR007376 dsDNA mimic, putative DDI_RS09050 b398cd44b8e09c85c0cfa4f74dd09b55 107 SUPERFAMILY SSF102816 1 107 1.7E-51 T 28-03-2018 IPR007376 dsDNA mimic, putative DDI_RS09050 b398cd44b8e09c85c0cfa4f74dd09b55 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.861 T 28-03-2018 IPR007376 dsDNA mimic, putative DDI_RS09050 b398cd44b8e09c85c0cfa4f74dd09b55 107 Gene3D G3DSA:3.10.450.140 8 106 6.9E-46 T 28-03-2018 IPR007376 dsDNA mimic, putative DDI_RS09050 b398cd44b8e09c85c0cfa4f74dd09b55 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 2.3E-48 T 28-03-2018 IPR007376 dsDNA mimic, putative DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.183 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 SUPERFAMILY SSF55031 208 320 3.35E-42 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 PIRSF PIRSF037215 1 408 9.0E-179 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 Pfam PF07687 Peptidase dimerisation domain 205 302 8.2E-10 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 Gene3D G3DSA:3.40.630.10 1 416 5.8E-51 T 28-03-2018 DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 SUPERFAMILY SSF53187 322 402 1.86E-80 T 28-03-2018 DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 SUPERFAMILY SSF53187 1 209 1.86E-80 T 28-03-2018 DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 Pfam PF01546 Peptidase family M20/M25/M40 139 401 7.2E-16 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS10095 fe218ccaa94f40c0ba96eba5caa52b7f 422 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 407 1.1E-150 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DDI_RS13240 db2dd1e84415ade8383d8cf22e4cc7bf 104 Pfam PF00367 phosphotransferase system, EIIB 30 62 3.7E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS13240 db2dd1e84415ade8383d8cf22e4cc7bf 104 SUPERFAMILY SSF55604 27 99 1.44E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS13240 db2dd1e84415ade8383d8cf22e4cc7bf 104 Gene3D G3DSA:3.30.1360.60 25 100 1.9E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS13240 db2dd1e84415ade8383d8cf22e4cc7bf 104 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 27 86 2.7E-14 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS13240 db2dd1e84415ade8383d8cf22e4cc7bf 104 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 40 57 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Pfam PF00270 DEAD/DEAH box helicase 28 187 3.2E-21 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Pfam PF09382 RQC domain 406 514 3.1E-39 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Gene3D G3DSA:3.40.50.300 3 208 1.2E-39 T 28-03-2018 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Gene3D G3DSA:3.40.50.300 210 402 4.7E-49 T 28-03-2018 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 1.1E-195 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 SUPERFAMILY SSF47819 531 605 4.8E-26 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 602 1.1E-264 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 SMART SM00341 530 609 3.0E-26 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 SUPERFAMILY SSF52540 208 454 4.96E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 SMART SM00487 22 218 8.4E-34 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 SMART SM00490 250 331 5.0E-28 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Pfam PF00271 Helicase conserved C-terminal domain 223 330 1.1E-18 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Gene3D G3DSA:1.10.150.80 534 606 4.7E-26 T 28-03-2018 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Gene3D G3DSA:1.10.10.10 403 529 1.8E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 SMART SM00956 411 514 8.0E-56 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Pfam PF16124 RecQ zinc-binding 343 404 3.0E-15 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 SUPERFAMILY SSF52540 9 199 3.12E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18645 434f4623e0ab1ff14103a7e6a100df34 609 Pfam PF00570 HRDC domain 534 600 1.6E-23 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 Pfam PF00005 ABC transporter 27 185 3.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 Pfam PF00005 ABC transporter 303 454 1.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 527 0.22 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 265 2.7E-5 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 SMART SM00382 35 235 9.6E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 SMART SM00382 312 502 3.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 SUPERFAMILY SSF52540 6 257 2.66E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 SUPERFAMILY SSF52540 278 525 5.22E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 Gene3D G3DSA:3.40.50.300 273 529 1.2E-70 T 28-03-2018 DDI_RS07695 78a769b189ea2a5b6258e64ad4484f24 530 Gene3D G3DSA:3.40.50.300 3 269 4.2E-69 T 28-03-2018 DDI_RS03650 9f63d83ce875c335e479cedc869c344e 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 143 2.9E-67 T 28-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE DDI_RS03650 9f63d83ce875c335e479cedc869c344e 147 Pfam PF02657 Fe-S metabolism associated domain 22 140 1.0E-36 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like DDI_RS03650 9f63d83ce875c335e479cedc869c344e 147 SUPERFAMILY SSF82649 5 144 3.45E-40 T 28-03-2018 DDI_RS03650 9f63d83ce875c335e479cedc869c344e 147 Gene3D G3DSA:3.90.1010.10 1 146 4.0E-41 T 28-03-2018 DDI_RS18400 a822575ad5cf6e16d61db3efdab2edb8 186 Pfam PF05137 Fimbrial assembly protein (PilN) 100 173 5.0E-8 T 28-03-2018 IPR007813 Fimbrial assembly PilN DDI_RS04790 e933870588cd4d7feab458a48330b72d 262 Pfam PF00795 Carbon-nitrogen hydrolase 3 246 1.1E-40 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS04790 e933870588cd4d7feab458a48330b72d 262 SUPERFAMILY SSF56317 1 253 1.09E-65 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS04790 e933870588cd4d7feab458a48330b72d 262 Gene3D G3DSA:3.60.110.10 1 259 4.8E-66 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS03005 0d0ae77157656ed7fd62005cfbd3dcfa 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 295 3.6E-83 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DDI_RS03005 0d0ae77157656ed7fd62005cfbd3dcfa 299 SUPERFAMILY SSF54909 1 297 7.69E-89 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS03005 0d0ae77157656ed7fd62005cfbd3dcfa 299 Pfam PF04261 Dyp-type peroxidase family 5 295 3.2E-86 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DDI_RS14030 2ec57a73b12e941ab7080a6877c3e9a3 255 SUPERFAMILY SSF48452 35 200 9.48E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS14030 2ec57a73b12e941ab7080a6877c3e9a3 255 Gene3D G3DSA:1.25.40.10 34 254 1.8E-32 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS14030 2ec57a73b12e941ab7080a6877c3e9a3 255 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 16 242 1.0E-66 T 28-03-2018 IPR013360 Pilus biogenesis/stability type IV, PilW DDI_RS14030 2ec57a73b12e941ab7080a6877c3e9a3 255 SMART SM00028 39 72 0.013 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS14030 2ec57a73b12e941ab7080a6877c3e9a3 255 SMART SM00028 143 176 2.7 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS14030 2ec57a73b12e941ab7080a6877c3e9a3 255 SMART SM00028 73 106 91.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS21520 9d172958f5ab3237d29f2e22ecebdc0a 150 PIRSF PIRSF016548 1 149 4.5E-38 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 DDI_RS21520 9d172958f5ab3237d29f2e22ecebdc0a 150 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 146 6.8E-44 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 DDI_RS16520 5601cd627ea57b48982c213155407384 279 Gene3D G3DSA:3.40.50.1360 87 265 1.2E-34 T 28-03-2018 DDI_RS16520 5601cd627ea57b48982c213155407384 279 SUPERFAMILY SSF100950 98 255 4.92E-26 T 28-03-2018 DDI_RS16520 5601cd627ea57b48982c213155407384 279 SMART SM01134 95 255 1.2E-63 T 28-03-2018 DDI_RS16520 5601cd627ea57b48982c213155407384 279 Pfam PF00455 DeoR C terminal sensor domain 98 254 8.1E-47 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain DDI_RS16520 5601cd627ea57b48982c213155407384 279 ProSitePatterns PS00894 DeoR-type HTH domain signature. 28 62 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDI_RS16520 5601cd627ea57b48982c213155407384 279 Gene3D G3DSA:1.10.10.10 13 82 1.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16520 5601cd627ea57b48982c213155407384 279 SUPERFAMILY SSF46785 27 95 9.49E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16520 5601cd627ea57b48982c213155407384 279 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 46 60 1.0E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS16520 5601cd627ea57b48982c213155407384 279 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 60 78 1.0E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS16520 5601cd627ea57b48982c213155407384 279 Pfam PF08220 DeoR-like helix-turn-helix domain 28 81 5.0E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS16520 5601cd627ea57b48982c213155407384 279 SMART SM00420 28 80 5.8E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 SMART SM00478 40 191 6.8E-51 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 SUPERFAMILY SSF55811 221 345 7.5E-23 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 168 6.4E-21 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 Gene3D G3DSA:3.90.79.10 225 353 3.8E-5 T 28-03-2018 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 277 2.1E-126 T 28-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 Pfam PF00633 Helix-hairpin-helix motif 100 128 1.6E-7 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 SMART SM00525 192 212 5.6E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 Pfam PF14815 NUDIX domain 234 343 1.2E-23 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 SUPERFAMILY SSF48150 3 226 5.65E-78 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 Gene3D G3DSA:1.10.1670.10 120 224 6.0E-33 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 4.2E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DDI_RS03515 cce34cdf4b5d320cf1ed9ce35b7bf641 361 Gene3D G3DSA:1.10.340.30 22 119 4.5E-33 T 28-03-2018 DDI_RS04650 50208b9e28627d98e23da9e97c6cbcfe 281 Gene3D G3DSA:1.10.3720.10 24 274 1.2E-42 T 28-03-2018 DDI_RS04650 50208b9e28627d98e23da9e97c6cbcfe 281 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 69 163 3.3E-26 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS04650 50208b9e28627d98e23da9e97c6cbcfe 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 268 4.9E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS04650 50208b9e28627d98e23da9e97c6cbcfe 281 SUPERFAMILY SSF161098 67 254 3.4E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07365 ab761220128765fa941bcdab27720024 219 Gene3D G3DSA:1.10.3720.10 2 218 1.7E-43 T 28-03-2018 DDI_RS07365 ab761220128765fa941bcdab27720024 219 SUPERFAMILY SSF161098 13 202 1.83E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07365 ab761220128765fa941bcdab27720024 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 3.8E-29 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS07365 ab761220128765fa941bcdab27720024 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 2.9E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17740 b00d695df72d555268804ad9373f5002 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 44.76 T 28-03-2018 IPR022894 Oligoribonuclease GO:0000175 DDI_RS17740 b00d695df72d555268804ad9373f5002 180 Gene3D G3DSA:3.30.420.10 1 180 1.7E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS17740 b00d695df72d555268804ad9373f5002 180 SUPERFAMILY SSF53098 1 179 5.57E-50 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS17740 b00d695df72d555268804ad9373f5002 180 SMART SM00479 6 179 1.7E-21 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDI_RS17740 b00d695df72d555268804ad9373f5002 180 Pfam PF00929 Exonuclease 8 169 2.6E-35 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDI_RS18180 800f8f2f1857c2764380d86742dde333 295 Gene3D G3DSA:3.40.190.10 39 146 1.5E-16 T 28-03-2018 DDI_RS18180 800f8f2f1857c2764380d86742dde333 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 275 8.0E-37 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS18180 800f8f2f1857c2764380d86742dde333 295 Gene3D G3DSA:3.40.190.10 147 235 6.7E-17 T 28-03-2018 DDI_RS18180 800f8f2f1857c2764380d86742dde333 295 SUPERFAMILY SSF53850 1 277 3.68E-42 T 28-03-2018 DDI_RS18180 800f8f2f1857c2764380d86742dde333 295 SMART SM00062 48 279 9.9E-12 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS16575 81031046fe87e1dba570437889794ac9 865 Gene3D G3DSA:3.20.19.10 162 363 2.1E-34 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DDI_RS16575 81031046fe87e1dba570437889794ac9 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 Gene3D G3DSA:3.30.499.10 402 520 9.2E-11 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.0E-96 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 SUPERFAMILY SSF74778 2 160 1.57E-66 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 Gene3D G3DSA:3.40.1060.10 521 682 6.6E-27 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 9.0E-65 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 SUPERFAMILY SSF53732 380 860 1.83E-149 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 9.2E-39 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 PIRSF PIRSF036687 1 859 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 SUPERFAMILY SSF52016 162 371 2.55E-71 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DDI_RS16575 81031046fe87e1dba570437889794ac9 865 Gene3D G3DSA:3.30.499.10 683 865 6.0E-55 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16575 81031046fe87e1dba570437889794ac9 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Gene3D G3DSA:1.25.40.10 681 1016 6.6E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SMART SM00028 680 713 490.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SMART SM00028 72 105 130.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SMART SM00028 38 71 73.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SMART SM00028 382 415 46.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SMART SM00028 267 300 84.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SMART SM00028 301 334 2.4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SMART SM00028 780 813 72.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Gene3D G3DSA:2.40.160.20 1113 1314 7.6E-7 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Gene3D G3DSA:1.25.40.10 522 677 4.6E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Gene3D G3DSA:1.25.40.10 459 521 1.9E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SUPERFAMILY SSF48452 465 515 1.69E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SUPERFAMILY SSF48452 694 768 1.69E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Gene3D G3DSA:1.25.40.10 26 151 4.3E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Gene3D G3DSA:1.25.40.10 363 450 1.5E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SUPERFAMILY SSF48452 39 108 2.07E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SUPERFAMILY SSF48452 173 203 2.07E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SUPERFAMILY SSF48452 273 361 7.33E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 SUPERFAMILY SSF48452 388 438 7.33E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Gene3D G3DSA:1.25.40.10 164 362 3.2E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 PRINTS PR01441 Cellulose synthase subunit C signature 491 511 3.7E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 PRINTS PR01441 Cellulose synthase subunit C signature 1120 1143 3.7E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 PRINTS PR01441 Cellulose synthase subunit C signature 156 168 3.7E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 PRINTS PR01441 Cellulose synthase subunit C signature 732 760 3.7E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 PRINTS PR01441 Cellulose synthase subunit C signature 1177 1201 3.7E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 PRINTS PR01441 Cellulose synthase subunit C signature 186 203 3.7E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 PRINTS PR01441 Cellulose synthase subunit C signature 46 66 3.7E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 PRINTS PR01441 Cellulose synthase subunit C signature 1217 1238 3.7E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Pfam PF07721 Tetratricopeptide repeat 609 627 0.5 T 28-03-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 919 1312 2.4E-129 T 28-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Pfam PF13432 Tetratricopeptide repeat 388 441 0.0079 T 28-03-2018 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Pfam PF13432 Tetratricopeptide repeat 277 331 5.7E-7 T 28-03-2018 DDI_RS19470 f54cef6817588e4c8cfdecd29bb31044 1315 Pfam PF14559 Tetratricopeptide repeat 468 524 6.3E-8 T 28-03-2018 DDI_RS09950 e594d666a426e3eb4e01f55cb6eef793 238 Gene3D G3DSA:2.40.160.40 22 238 3.6E-33 T 28-03-2018 DDI_RS09950 e594d666a426e3eb4e01f55cb6eef793 238 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 238 4.3E-93 T 28-03-2018 IPR009331 Oligogalacturonate-specific porin DDI_RS09950 e594d666a426e3eb4e01f55cb6eef793 238 SUPERFAMILY SSF56935 51 238 7.32E-10 T 28-03-2018 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 Gene3D G3DSA:3.40.50.300 193 395 2.0E-41 T 28-03-2018 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 18 524 6.7E-210 T 28-03-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 SMART SM00065 35 186 9.4E-23 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 295 310 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 SUPERFAMILY SSF52540 209 449 7.72E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 SUPERFAMILY SSF46689 421 519 6.72E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 233 246 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 SMART SM00382 229 372 1.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 421 430 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 Pfam PF00158 Sigma-54 interaction domain 209 375 1.3E-71 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 Pfam PF02954 Bacterial regulatory protein, Fis family 481 515 1.9E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 500 520 1.3E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 483 500 1.3E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 SUPERFAMILY SSF55781 17 174 4.58E-17 T 28-03-2018 IPR029016 GAF domain-like DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 Gene3D G3DSA:1.10.8.60 396 443 7.3E-22 T 28-03-2018 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 Pfam PF13185 GAF domain 34 174 4.1E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 Gene3D G3DSA:3.30.450.40 23 181 1.1E-16 T 28-03-2018 IPR029016 GAF domain-like DDI_RS17510 1ece0c320d1d77aef878c0cd7bc770d6 524 Gene3D G3DSA:1.10.10.60 444 515 1.5E-8 T 28-03-2018 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 364 510 1.3E-30 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 Gene3D G3DSA:3.60.21.10 26 362 4.4E-86 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 2.2E-18 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 PRINTS PR01607 Apyrase family signature 207 224 5.7E-57 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 PRINTS PR01607 Apyrase family signature 238 261 5.7E-57 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 PRINTS PR01607 Apyrase family signature 484 503 5.7E-57 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 PRINTS PR01607 Apyrase family signature 283 303 5.7E-57 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 PRINTS PR01607 Apyrase family signature 417 440 5.7E-57 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 PRINTS PR01607 Apyrase family signature 32 50 5.7E-57 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 SUPERFAMILY SSF55816 363 540 1.57E-48 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 Gene3D G3DSA:3.90.780.10 363 549 8.2E-43 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS04460 46ee55bda1e51fb00ae1322da4cad95f 550 SUPERFAMILY SSF56300 27 361 1.12E-98 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS11725 37f2e76059d291486b7b5288a5fb4493 336 Gene3D G3DSA:1.10.8.10 169 206 2.6E-12 T 28-03-2018 DDI_RS11725 37f2e76059d291486b7b5288a5fb4493 336 Pfam PF13177 DNA polymerase III, delta subunit 10 164 3.8E-39 T 28-03-2018 DDI_RS11725 37f2e76059d291486b7b5288a5fb4493 336 SUPERFAMILY SSF52540 1 206 3.99E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11725 37f2e76059d291486b7b5288a5fb4493 336 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 321 7.9E-40 T 28-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS11725 37f2e76059d291486b7b5288a5fb4493 336 Gene3D G3DSA:3.40.50.300 7 165 4.3E-23 T 28-03-2018 DDI_RS11725 37f2e76059d291486b7b5288a5fb4493 336 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 201 2.8E-58 T 28-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS11725 37f2e76059d291486b7b5288a5fb4493 336 SUPERFAMILY SSF48019 208 326 1.26E-34 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DDI_RS11725 37f2e76059d291486b7b5288a5fb4493 336 Gene3D G3DSA:1.20.272.10 208 330 2.2E-24 T 28-03-2018 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 PIRSF PIRSF000727 1 816 0.0 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Gene3D G3DSA:3.40.50.720 465 635 7.1E-29 T 28-03-2018 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Gene3D G3DSA:3.30.360.10 636 792 9.7E-52 T 28-03-2018 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 SUPERFAMILY SSF51735 464 636 1.38E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Pfam PF00742 Homoserine dehydrogenase 614 809 3.0E-47 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 SUPERFAMILY SSF55021 303 381 1.25E-23 T 28-03-2018 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Gene3D G3DSA:3.30.70.260 385 464 8.4E-17 T 28-03-2018 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Pfam PF00696 Amino acid kinase family 2 284 3.1E-48 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 SUPERFAMILY SSF53633 1 295 1.28E-73 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 SUPERFAMILY SSF55347 614 796 4.12E-50 T 28-03-2018 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 4.7E-27 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.1E-146 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 SUPERFAMILY SSF55021 384 476 2.06E-20 T 28-03-2018 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Gene3D G3DSA:3.30.70.260 289 384 2.4E-27 T 28-03-2018 DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Pfam PF13840 ACT domain 314 376 1.3E-8 T 28-03-2018 IPR027795 GATS-like ACT domain DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Pfam PF13840 ACT domain 395 446 2.2E-6 T 28-03-2018 IPR027795 GATS-like ACT domain DDI_RS17085 d611fb5d1b78631d7c2e3f68f04bb54b 818 Gene3D G3DSA:3.40.1160.10 1 288 1.5E-65 T 28-03-2018 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 PRINTS PR01004 Flagellar FliJ protein signature 27 43 5.3E-40 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 PRINTS PR01004 Flagellar FliJ protein signature 44 61 5.3E-40 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 PRINTS PR01004 Flagellar FliJ protein signature 63 84 5.3E-40 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 PRINTS PR01004 Flagellar FliJ protein signature 126 146 5.3E-40 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 PRINTS PR01004 Flagellar FliJ protein signature 4 26 5.3E-40 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 PRINTS PR01004 Flagellar FliJ protein signature 86 107 5.3E-40 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 PRINTS PR01004 Flagellar FliJ protein signature 108 126 5.3E-40 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 Pfam PF02050 Flagellar FliJ protein 19 141 3.5E-34 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 5.6E-32 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DDI_RS12010 4529a8d22d552dc42f158ae2c0231bba 146 PIRSF PIRSF019404 1 146 4.4E-47 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DDI_RS18890 df8b64627a768a95e06fcab2400b2199 99 SUPERFAMILY SSF54534 9 96 1.64E-29 T 28-03-2018 DDI_RS18890 df8b64627a768a95e06fcab2400b2199 99 Pfam PF13616 PPIC-type PPIASE domain 3 96 1.4E-23 T 28-03-2018 DDI_RS18890 df8b64627a768a95e06fcab2400b2199 99 Gene3D G3DSA:3.10.50.40 1 96 1.7E-30 T 28-03-2018 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 Pfam PF00072 Response regulator receiver domain 6 120 8.7E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 SMART SM00448 4 120 1.4E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 SUPERFAMILY SSF46894 146 209 6.46E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 SUPERFAMILY SSF52172 3 135 2.7E-21 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 SMART SM00421 148 205 9.1E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 Gene3D G3DSA:3.40.50.2300 3 131 2.1E-21 T 28-03-2018 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 4.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 Gene3D G3DSA:1.10.10.10 132 215 7.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04545 c329f796ebb19f50471e9c902498e554 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.901 T 28-03-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 DDI_RS12185 c93728716a1a8f096cb760dfcdff6aa3 192 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 8.1E-86 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 DDI_RS12185 c93728716a1a8f096cb760dfcdff6aa3 192 PIRSF PIRSF003159 1 181 3.2E-92 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 DDI_RS12185 c93728716a1a8f096cb760dfcdff6aa3 192 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 192 9.0E-107 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 DDI_RS12185 c93728716a1a8f096cb760dfcdff6aa3 192 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 186 46.568 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 DDI_RS12185 c93728716a1a8f096cb760dfcdff6aa3 192 SUPERFAMILY SSF160930 5 160 2.35E-66 T 28-03-2018 DDI_RS20115 31cd4b02c8b444b6ca9faf9e188f5b48 157 PIRSF PIRSF020565 1 157 1.1E-43 T 28-03-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted DDI_RS20115 31cd4b02c8b444b6ca9faf9e188f5b48 157 SUPERFAMILY SSF54637 10 146 3.54E-25 T 28-03-2018 IPR029069 HotDog domain DDI_RS20115 31cd4b02c8b444b6ca9faf9e188f5b48 157 Gene3D G3DSA:3.10.129.10 6 141 6.6E-26 T 28-03-2018 DDI_RS20115 31cd4b02c8b444b6ca9faf9e188f5b48 157 Pfam PF07977 FabA-like domain 11 134 9.9E-6 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 Gene3D G3DSA:3.40.980.10 1 172 4.9E-40 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 SUPERFAMILY SSF53218 2 192 2.62E-35 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 PIRSF PIRSF006728 1 385 1.0E-107 T 28-03-2018 IPR008135 Competence-induced protein CinA DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 Pfam PF00994 Probable molybdopterin binding domain 6 170 1.1E-31 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 167 5.2E-30 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 SMART SM00852 5 172 1.2E-35 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 397 112.253 T 28-03-2018 IPR008135 Competence-induced protein CinA DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 397 8.5E-124 T 28-03-2018 IPR008135 Competence-induced protein CinA DDI_RS04595 4f66822ad7b5d4a74d9e06961cdc7ff0 397 Gene3D G3DSA:3.90.950.20 244 293 0.039 T 28-03-2018 DDI_RS06435 1d99b1dbbed8e0fb44f28d318f7a8d22 324 Gene3D G3DSA:1.10.3720.10 1 308 2.6E-39 T 28-03-2018 DDI_RS06435 1d99b1dbbed8e0fb44f28d318f7a8d22 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 4.8E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06435 1d99b1dbbed8e0fb44f28d318f7a8d22 324 SUPERFAMILY SSF161098 89 304 2.83E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS18635 ab07b23f00d28adcf1efaab1909edf6c 206 Pfam PF01810 LysE type translocator 14 202 2.2E-47 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS18635 ab07b23f00d28adcf1efaab1909edf6c 206 PIRSF PIRSF006324 1 205 7.4E-56 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS07650 8b1ab18788570b7390ca19bbda660a97 244 SMART SM00448 1 112 9.8E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS07650 8b1ab18788570b7390ca19bbda660a97 244 Gene3D G3DSA:2.40.50.40 137 205 1.5E-14 T 28-03-2018 DDI_RS07650 8b1ab18788570b7390ca19bbda660a97 244 SMART SM00850 145 243 3.3E-34 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DDI_RS07650 8b1ab18788570b7390ca19bbda660a97 244 SUPERFAMILY SSF52172 2 124 2.28E-24 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS07650 8b1ab18788570b7390ca19bbda660a97 244 Pfam PF04397 LytTr DNA-binding domain 145 242 3.4E-29 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DDI_RS07650 8b1ab18788570b7390ca19bbda660a97 244 Gene3D G3DSA:2.20.25.10 206 243 6.2E-16 T 28-03-2018 DDI_RS07650 8b1ab18788570b7390ca19bbda660a97 244 Pfam PF00072 Response regulator receiver domain 4 112 2.8E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS07650 8b1ab18788570b7390ca19bbda660a97 244 Gene3D G3DSA:3.40.50.2300 1 131 3.0E-23 T 28-03-2018 DDI_RS06905 6711aaf8e8bf9ee71d32d51941137bbb 400 Pfam PF03743 Bacterial conjugation TrbI-like protein 204 385 3.7E-43 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI DDI_RS20990 a6caa4613bcc8225cf980eb78f31660e 493 SUPERFAMILY SSF56954 134 485 2.44E-62 T 28-03-2018 DDI_RS20990 a6caa4613bcc8225cf980eb78f31660e 493 SUPERFAMILY SSF56954 4 105 2.44E-62 T 28-03-2018 DDI_RS20990 a6caa4613bcc8225cf980eb78f31660e 493 Pfam PF02321 Outer membrane efflux protein 54 273 5.0E-18 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS20990 a6caa4613bcc8225cf980eb78f31660e 493 Pfam PF02321 Outer membrane efflux protein 298 481 8.7E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS20990 a6caa4613bcc8225cf980eb78f31660e 493 Gene3D G3DSA:1.20.1600.10 39 491 2.2E-76 T 28-03-2018 DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 4.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 4.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 4.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 4.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 4.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 4.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 SUPERFAMILY SSF51735 23 266 1.05E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 160 188 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 192 1.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 1.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 1.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 Gene3D G3DSA:3.40.50.720 15 265 3.4E-67 T 28-03-2018 DDI_RS00990 7125d54156e1b4a94fa04a58833ec3d0 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 265 1.0E-63 T 28-03-2018 DDI_RS12810 56ce7e3322d13e819236809efbeb3fbf 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS12810 56ce7e3322d13e819236809efbeb3fbf 259 Gene3D G3DSA:3.40.190.10 140 259 1.3E-14 T 28-03-2018 DDI_RS12810 56ce7e3322d13e819236809efbeb3fbf 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 253 1.2E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS12810 56ce7e3322d13e819236809efbeb3fbf 259 SMART SM00062 26 255 1.0E-73 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS12810 56ce7e3322d13e819236809efbeb3fbf 259 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 10 252 8.0E-92 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 DDI_RS12810 56ce7e3322d13e819236809efbeb3fbf 259 SUPERFAMILY SSF53850 1 256 1.24E-65 T 28-03-2018 DDI_RS12810 56ce7e3322d13e819236809efbeb3fbf 259 Gene3D G3DSA:3.40.190.10 18 139 8.0E-36 T 28-03-2018 DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 600 2.6E-24 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 Gene3D G3DSA:2.40.50.140 348 411 1.5E-22 T 28-03-2018 DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 783 4.7E-173 T 28-03-2018 DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 Gene3D G3DSA:3.40.710.10 412 801 1.4E-95 T 28-03-2018 DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 Pfam PF00912 Transglycosylase 55 229 2.4E-66 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 SUPERFAMILY SSF56601 422 610 5.81E-111 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 SUPERFAMILY SSF56601 211 233 5.81E-111 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 SUPERFAMILY SSF56601 262 313 5.81E-111 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 SUPERFAMILY SSF56601 671 832 5.81E-111 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 3.6E-30 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 SUPERFAMILY SSF53955 43 257 2.81E-81 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS18410 e92d8d9d285575ce238a15f70ce2eb86 852 Gene3D G3DSA:1.10.3810.10 47 246 2.1E-84 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 DDI_RS13595 10c04f9943770f25d46961934d19812a 148 Pfam PF03733 Inner membrane component domain 77 127 2.2E-17 T 28-03-2018 IPR005185 Inner membrane component domain DDI_RS13595 10c04f9943770f25d46961934d19812a 148 Pfam PF03733 Inner membrane component domain 4 53 7.7E-9 T 28-03-2018 IPR005185 Inner membrane component domain DDI_RS13595 10c04f9943770f25d46961934d19812a 148 PIRSF PIRSF028777 1 139 6.1E-54 T 28-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 DDI_RS01090 b4831831755fc25a0c755cda43161930 363 SUPERFAMILY SSF52540 10 349 6.06E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01090 b4831831755fc25a0c755cda43161930 363 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 31 312 2.7E-24 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS01090 b4831831755fc25a0c755cda43161930 363 PIRSF PIRSF029347 135 347 1.2E-30 T 28-03-2018 IPR014555 RecF-like DDI_RS01090 b4831831755fc25a0c755cda43161930 363 PIRSF PIRSF029347 8 106 3.8E-14 T 28-03-2018 IPR014555 RecF-like DDI_RS01090 b4831831755fc25a0c755cda43161930 363 Gene3D G3DSA:3.40.50.300 9 348 9.1E-30 T 28-03-2018 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 SUPERFAMILY SSF63411 503 729 2.97E-44 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 Pfam PF16187 Middle or third domain of peptidase_M16 399 672 1.3E-57 T 28-03-2018 IPR032632 Peptidase M16, middle/third domain DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 SUPERFAMILY SSF63411 264 502 4.71E-66 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 Gene3D G3DSA:3.30.830.10 271 501 1.8E-60 T 28-03-2018 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 Pfam PF05193 Peptidase M16 inactive domain 215 391 2.1E-18 T 28-03-2018 IPR007863 Peptidase M16, C-terminal DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 Pfam PF05193 Peptidase M16 inactive domain 680 821 1.2E-7 T 28-03-2018 IPR007863 Peptidase M16, C-terminal DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 Pfam PF00675 Insulinase (Peptidase family M16) 54 190 4.4E-34 T 28-03-2018 IPR011765 Peptidase M16, N-terminal DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 SUPERFAMILY SSF63411 737 950 1.37E-41 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 Gene3D G3DSA:3.30.830.10 502 727 1.6E-26 T 28-03-2018 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 Gene3D G3DSA:3.30.830.10 728 960 1.7E-35 T 28-03-2018 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 74 97 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 SUPERFAMILY SSF63411 32 261 9.72E-52 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDI_RS03605 092b90cfd58ca0a84d881f63397b58c7 965 Gene3D G3DSA:3.30.830.10 23 267 6.4E-70 T 28-03-2018 DDI_RS16925 eeabe3d7ea035209b6745470a37eca20 803 Gene3D G3DSA:2.60.450.10 55 219 7.6E-17 T 28-03-2018 DDI_RS16925 eeabe3d7ea035209b6745470a37eca20 803 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 21 782 21.093 T 28-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 DDI_RS16925 eeabe3d7ea035209b6745470a37eca20 803 Pfam PF03968 OstA-like protein 64 205 1.5E-27 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal DDI_RS16925 eeabe3d7ea035209b6745470a37eca20 803 Pfam PF04453 Organic solvent tolerance protein 326 716 8.7E-102 T 28-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 PRINTS PR01806 Virulence factor MviN signature 33 52 4.6E-85 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 PRINTS PR01806 Virulence factor MviN signature 357 376 4.6E-85 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 PRINTS PR01806 Virulence factor MviN signature 157 178 4.6E-85 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 PRINTS PR01806 Virulence factor MviN signature 133 157 4.6E-85 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 PRINTS PR01806 Virulence factor MviN signature 52 68 4.6E-85 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 PRINTS PR01806 Virulence factor MviN signature 259 285 4.6E-85 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 PRINTS PR01806 Virulence factor MviN signature 409 426 4.6E-85 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 466 20.465 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 PIRSF PIRSF002869 1 511 2.1E-176 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 4.9E-164 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS08520 a165c89968df68ef6ba1cedf8e09d66d 511 Pfam PF03023 MviN-like protein 28 478 1.8E-151 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDI_RS10000 8f777b400579df27636add02607d4458 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 4.5E-119 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DDI_RS10000 8f777b400579df27636add02607d4458 327 SUPERFAMILY SSF46589 14 99 1.83E-22 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 DDI_RS10000 8f777b400579df27636add02607d4458 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 2.0E-107 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 DDI_RS10000 8f777b400579df27636add02607d4458 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.967 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 DDI_RS10000 8f777b400579df27636add02607d4458 327 SUPERFAMILY SSF55681 92 327 2.68E-82 T 28-03-2018 DDI_RS10000 8f777b400579df27636add02607d4458 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.7E-27 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DDI_RS10000 8f777b400579df27636add02607d4458 327 Gene3D G3DSA:3.30.930.10 7 327 1.3E-90 T 28-03-2018 DDI_RS06795 2e073fb78071bb02bdd4f36861a1ddd9 196 Gene3D G3DSA:2.30.110.10 1 196 1.5E-32 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS06795 2e073fb78071bb02bdd4f36861a1ddd9 196 Pfam PF01613 Flavin reductase like domain 14 184 3.4E-17 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 DDI_RS06795 2e073fb78071bb02bdd4f36861a1ddd9 196 SUPERFAMILY SSF50475 9 186 2.41E-30 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 SUPERFAMILY SSF109604 339 511 2.93E-16 T 28-03-2018 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 556 1.4E-211 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 4.9E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 4.9E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 4.9E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 4.9E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 4.9E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 Pfam PF05746 DALR anticodon binding domain 587 684 1.5E-8 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 694 0.0 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 Gene3D G3DSA:1.10.730.10 579 689 1.8E-11 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS20550 8e30546a9fa3139a9d5d8ef4a562f5ad 694 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 693 26.788 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDI_RS06480 736c5747e37e5d4e076c418bbe85206d 266 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 266 1.2E-91 T 28-03-2018 DDI_RS06480 736c5747e37e5d4e076c418bbe85206d 266 SUPERFAMILY SSF52096 21 212 3.59E-22 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS06480 736c5747e37e5d4e076c418bbe85206d 266 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 8 266 3.9E-95 T 28-03-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 DDI_RS06480 736c5747e37e5d4e076c418bbe85206d 266 Gene3D G3DSA:3.90.226.10 9 263 5.5E-26 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 3.2E-37 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.2E-37 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.2E-37 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.2E-37 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.2E-37 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.2E-37 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 SUPERFAMILY SSF52317 1 191 1.6E-55 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS18280 e511362dabce274d734076c795017e99 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 1.5E-91 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS18280 e511362dabce274d734076c795017e99 191 Gene3D G3DSA:3.40.50.880 1 191 7.0E-60 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS18280 e511362dabce274d734076c795017e99 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 9.5E-56 T 28-03-2018 IPR017926 Glutamine amidotransferase DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 9.9E-14 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 9.9E-14 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 9.9E-14 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 91 108 7.1E-7 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.1E-7 T 28-03-2018 DDI_RS18280 e511362dabce274d734076c795017e99 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.1E-7 T 28-03-2018 DDI_RS05580 e45ab8b306f39828349b24772851fc30 383 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 342 3.8E-74 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDI_RS05580 e45ab8b306f39828349b24772851fc30 383 Gene3D G3DSA:3.20.20.70 2 365 1.2E-94 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS05580 e45ab8b306f39828349b24772851fc30 383 SUPERFAMILY SSF51395 3 344 2.17E-92 T 28-03-2018 DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 SMART SM00487 25 223 1.4E-63 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 561 46.953 T 28-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 Pfam PF00270 DEAD/DEAH box helicase 31 195 6.3E-52 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 Pfam PF03880 DbpA RNA binding domain 490 559 2.6E-19 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 Gene3D G3DSA:3.40.50.300 2 220 2.0E-60 T 28-03-2018 DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 SMART SM00490 259 340 1.5E-31 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 SUPERFAMILY SSF52540 75 361 2.76E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.0E-29 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS02175 4242200d4c4c110c3d6fc15a693f4ab7 628 Gene3D G3DSA:3.40.50.300 221 408 1.2E-41 T 28-03-2018 DDI_RS15020 5d07fb252b0f5bc0be7b514bb6500e34 344 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 8 310 1.5E-95 T 28-03-2018 IPR010148 CRISPR-associated protein, CT1975 DDI_RS15020 5d07fb252b0f5bc0be7b514bb6500e34 344 Pfam PF09344 CT1975-like protein 10 310 2.5E-92 T 28-03-2018 IPR010148 CRISPR-associated protein, CT1975 DDI_RS14035 a9093e439f8d91d10562da1da0d52cf2 392 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 23 377 7.1E-170 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS14035 a9093e439f8d91d10562da1da0d52cf2 392 SUPERFAMILY SSF102114 122 338 7.46E-14 T 28-03-2018 DDI_RS14035 a9093e439f8d91d10562da1da0d52cf2 392 Pfam PF04055 Radical SAM superfamily 128 297 5.5E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS14035 a9093e439f8d91d10562da1da0d52cf2 392 Gene3D G3DSA:3.20.20.70 34 388 3.7E-41 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS14035 a9093e439f8d91d10562da1da0d52cf2 392 PIRSF PIRSF006004 19 385 5.6E-145 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS14035 a9093e439f8d91d10562da1da0d52cf2 392 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 25 372 73.829 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS20740 c258c31acb3b45cca084c13f739692e7 187 SMART SM00342 58 142 1.0E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS20740 c258c31acb3b45cca084c13f739692e7 187 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 95 138 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS20740 c258c31acb3b45cca084c13f739692e7 187 SUPERFAMILY SSF46689 94 145 1.43E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20740 c258c31acb3b45cca084c13f739692e7 187 Gene3D G3DSA:1.10.10.60 104 162 1.8E-12 T 28-03-2018 DDI_RS20740 c258c31acb3b45cca084c13f739692e7 187 SUPERFAMILY SSF46689 44 92 1.43E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20740 c258c31acb3b45cca084c13f739692e7 187 Pfam PF12833 Helix-turn-helix domain 68 143 7.0E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS20740 c258c31acb3b45cca084c13f739692e7 187 Gene3D G3DSA:2.60.120.10 4 102 2.0E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS18170 4698b347d892223ab5e5cb7f60c27fef 256 SUPERFAMILY SSF52540 7 251 1.24E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18170 4698b347d892223ab5e5cb7f60c27fef 256 SMART SM00382 32 229 9.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS18170 4698b347d892223ab5e5cb7f60c27fef 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS18170 4698b347d892223ab5e5cb7f60c27fef 256 Gene3D G3DSA:3.40.50.300 4 255 1.3E-75 T 28-03-2018 DDI_RS18170 4698b347d892223ab5e5cb7f60c27fef 256 Pfam PF00005 ABC transporter 23 181 3.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS18170 4698b347d892223ab5e5cb7f60c27fef 256 PIRSF PIRSF039085 4 256 4.0E-118 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS00790 f1110e7b0a62597077184d212e9968d7 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 3.5E-115 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 DDI_RS00790 f1110e7b0a62597077184d212e9968d7 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 3.5E-71 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DDI_RS07730 07f386a081b9936d90adb48aa07942b5 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 59 8.9E-5 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DDI_RS15975 e361d3590bfe8806bc2348752c08bf55 378 SUPERFAMILY SSF53474 277 378 7.68E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS15975 e361d3590bfe8806bc2348752c08bf55 378 SUPERFAMILY SSF53474 13 199 7.68E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS15975 e361d3590bfe8806bc2348752c08bf55 378 Pfam PF12697 Alpha/beta hydrolase family 107 358 8.0E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS15975 e361d3590bfe8806bc2348752c08bf55 378 Gene3D G3DSA:3.40.50.1820 36 377 4.0E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS20985 ff0a2f10df67c4df108fa2b678c54c39 406 Gene3D G3DSA:3.40.50.720 126 369 0.0019 T 28-03-2018 DDI_RS20985 ff0a2f10df67c4df108fa2b678c54c39 406 Pfam PF12704 MacB-like periplasmic core domain 32 249 1.2E-22 T 28-03-2018 IPR025857 MacB-like periplasmic core domain DDI_RS20985 ff0a2f10df67c4df108fa2b678c54c39 406 Pfam PF02687 FtsX-like permease family 310 399 1.4E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDI_RS05905 1587d87863cd7473a0cc8844121b3f63 315 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 45 60 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05905 1587d87863cd7473a0cc8844121b3f63 315 Pfam PF00146 NADH dehydrogenase 16 310 8.7E-53 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05905 1587d87863cd7473a0cc8844121b3f63 315 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 201 214 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 Gene3D G3DSA:1.10.10.10 1 73 3.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 SUPERFAMILY SSF48008 101 230 4.18E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 SMART SM00345 12 71 8.5E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 SUPERFAMILY SSF46785 6 75 1.34E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 6.5E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.7E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.7E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 SMART SM00895 100 223 1.1E-17 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 Pfam PF07729 FCD domain 102 221 6.3E-25 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS05545 899328ff3fe055b3d0d17255f35d30d1 232 Gene3D G3DSA:1.20.120.530 83 232 5.2E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS05380 2eeecbb8cfa2273595d957aaf123bd65 303 SUPERFAMILY SSF53448 7 212 1.41E-37 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05380 2eeecbb8cfa2273595d957aaf123bd65 303 SUPERFAMILY SSF53448 254 294 1.41E-37 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05380 2eeecbb8cfa2273595d957aaf123bd65 303 Gene3D G3DSA:3.90.550.10 5 234 1.1E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05380 2eeecbb8cfa2273595d957aaf123bd65 303 Pfam PF13641 Glycosyltransferase like family 2 6 212 2.5E-15 T 28-03-2018 DDI_RS13200 210709d1b7e34d4201c097896d44eb4e 814 Gene3D G3DSA:1.20.1170.10 20 210 8.8E-4 T 28-03-2018 DDI_RS13200 210709d1b7e34d4201c097896d44eb4e 814 SUPERFAMILY SSF82689 705 796 4.45E-13 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DDI_RS13200 210709d1b7e34d4201c097896d44eb4e 814 Pfam PF00924 Mechanosensitive ion channel 594 787 8.9E-41 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DDI_RS13200 210709d1b7e34d4201c097896d44eb4e 814 Gene3D G3DSA:2.30.30.60 648 696 3.4E-12 T 28-03-2018 DDI_RS13200 210709d1b7e34d4201c097896d44eb4e 814 Pfam PF12607 Protein of unknown function (DUF3772) 142 202 8.2E-18 T 28-03-2018 IPR022249 Domain of unknown function DUF3772 DDI_RS13200 210709d1b7e34d4201c097896d44eb4e 814 SUPERFAMILY SSF82861 548 631 4.58E-10 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DDI_RS13200 210709d1b7e34d4201c097896d44eb4e 814 Gene3D G3DSA:3.30.70.100 702 794 8.6E-12 T 28-03-2018 DDI_RS13200 210709d1b7e34d4201c097896d44eb4e 814 SUPERFAMILY SSF50182 633 698 6.54E-15 T 28-03-2018 IPR010920 LSM domain DDI_RS06865 7af272429d3bbee451dcff6b3c9dc36c 521 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 138 431 7.3E-16 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS06865 7af272429d3bbee451dcff6b3c9dc36c 521 Gene3D G3DSA:3.40.50.300 121 509 4.4E-16 T 28-03-2018 DDI_RS06865 7af272429d3bbee451dcff6b3c9dc36c 521 SUPERFAMILY SSF52540 346 451 4.55E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06865 7af272429d3bbee451dcff6b3c9dc36c 521 SUPERFAMILY SSF52540 134 286 4.55E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15895 73b5f5f710e8ddc4e48c03987646e0b1 478 Pfam PF00232 Glycosyl hydrolase family 1 6 464 1.6E-102 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15895 73b5f5f710e8ddc4e48c03987646e0b1 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 296 310 4.8E-11 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15895 73b5f5f710e8ddc4e48c03987646e0b1 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 4.8E-11 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15895 73b5f5f710e8ddc4e48c03987646e0b1 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 4.8E-11 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15895 73b5f5f710e8ddc4e48c03987646e0b1 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 437 449 4.8E-11 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15895 73b5f5f710e8ddc4e48c03987646e0b1 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 4.8E-11 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15895 73b5f5f710e8ddc4e48c03987646e0b1 478 Gene3D G3DSA:3.20.20.80 6 468 1.5E-123 T 28-03-2018 DDI_RS15895 73b5f5f710e8ddc4e48c03987646e0b1 478 SUPERFAMILY SSF51445 5 463 9.91E-139 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS20375 77bcca0a0d1d95402ca079cf94c12aba 304 Hamap MF_01818 Ribonuclease BN [rbn]. 1 304 39.333 T 28-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 DDI_RS20375 77bcca0a0d1d95402ca079cf94c12aba 304 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 303 2.5E-101 T 28-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 DDI_RS20375 77bcca0a0d1d95402ca079cf94c12aba 304 Pfam PF12706 Beta-lactamase superfamily domain 35 150 8.5E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS20375 77bcca0a0d1d95402ca079cf94c12aba 304 Pfam PF12706 Beta-lactamase superfamily domain 202 270 4.1E-7 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS20375 77bcca0a0d1d95402ca079cf94c12aba 304 Gene3D G3DSA:3.60.15.10 1 304 7.7E-62 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS20375 77bcca0a0d1d95402ca079cf94c12aba 304 SUPERFAMILY SSF56281 1 303 6.16E-85 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS03280 c08d943be838a87c7d243a94ac44f946 380 SUPERFAMILY SSF111369 72 294 1.15E-24 T 28-03-2018 DDI_RS03280 c08d943be838a87c7d243a94ac44f946 380 Gene3D G3DSA:3.90.1170.30 49 126 3.2E-7 T 28-03-2018 DDI_RS03280 c08d943be838a87c7d243a94ac44f946 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 82 284 3.3E-17 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS03280 c08d943be838a87c7d243a94ac44f946 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 375 8.5E-67 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS03280 c08d943be838a87c7d243a94ac44f946 380 Gene3D G3DSA:1.10.287.470 127 183 3.9E-9 T 28-03-2018 DDI_RS03280 c08d943be838a87c7d243a94ac44f946 380 Gene3D G3DSA:2.40.50.100 184 364 7.7E-9 T 28-03-2018 DDI_RS04715 39c991b37d669d335118f06b3ac6d2fa 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 484 38.811 T 28-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 DDI_RS04715 39c991b37d669d335118f06b3ac6d2fa 487 Pfam PF01435 Peptidase family M48 74 259 5.2E-29 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DDI_RS04715 39c991b37d669d335118f06b3ac6d2fa 487 Gene3D G3DSA:1.25.20.10 251 486 4.9E-15 T 28-03-2018 DDI_RS04715 39c991b37d669d335118f06b3ac6d2fa 487 Gene3D G3DSA:3.30.2010.10 68 154 2.4E-18 T 28-03-2018 DDI_RS04715 39c991b37d669d335118f06b3ac6d2fa 487 SUPERFAMILY SSF48452 310 424 4.74E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 Gene3D G3DSA:3.40.50.300 255 511 1.6E-38 T 28-03-2018 DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 1.2E-266 T 28-03-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 SUPERFAMILY SSF52540 258 493 1.18E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 SMART SM00382 286 482 2.4E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 SMART SM00382 29 219 1.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 SUPERFAMILY SSF52540 4 232 6.29E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 Pfam PF00005 ABC transporter 20 171 2.0E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 Pfam PF00005 ABC transporter 278 433 9.6E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20650 fc0b3f999e488b5a9c228fa781c5f709 513 Gene3D G3DSA:3.40.50.300 2 235 9.7E-49 T 28-03-2018 DDI_RS14955 b91ecb5ae3fe54d25ba2bece6527c558 409 SUPERFAMILY SSF53187 13 182 3.93E-53 T 28-03-2018 DDI_RS14955 b91ecb5ae3fe54d25ba2bece6527c558 409 SUPERFAMILY SSF53187 315 403 3.93E-53 T 28-03-2018 DDI_RS14955 b91ecb5ae3fe54d25ba2bece6527c558 409 Pfam PF01546 Peptidase family M20/M25/M40 78 399 2.2E-29 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS14955 b91ecb5ae3fe54d25ba2bece6527c558 409 Gene3D G3DSA:3.40.630.10 2 291 1.8E-50 T 28-03-2018 DDI_RS14955 b91ecb5ae3fe54d25ba2bece6527c558 409 Pfam PF07687 Peptidase dimerisation domain 180 291 4.5E-8 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS14955 b91ecb5ae3fe54d25ba2bece6527c558 409 SUPERFAMILY SSF55031 183 300 1.06E-8 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS12110 0d2395b216927f3335a3da21034b6090 222 Pfam PF13144 Chaperone for flagella basal body P-ring formation 28 218 2.9E-46 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DDI_RS12110 0d2395b216927f3335a3da21034b6090 222 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 87 220 7.1E-41 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DDI_RS12110 0d2395b216927f3335a3da21034b6090 222 SMART SM00858 98 160 3.3E-10 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DDI_RS12110 0d2395b216927f3335a3da21034b6090 222 Gene3D G3DSA:3.90.1210.10 97 163 8.7E-14 T 28-03-2018 DDI_RS03125 257e853349d252e0a697d33f1dc31392 155 Pfam PF05232 Chlorhexidine efflux transporter 82 145 7.1E-23 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter DDI_RS03125 257e853349d252e0a697d33f1dc31392 155 Pfam PF05232 Chlorhexidine efflux transporter 14 76 2.9E-25 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter DDI_RS16025 0e007188d90f6bb747aa28ceb7c85199 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 253 7.0E-39 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS16025 0e007188d90f6bb747aa28ceb7c85199 255 Gene3D G3DSA:3.40.190.10 20 177 3.8E-31 T 28-03-2018 DDI_RS16025 0e007188d90f6bb747aa28ceb7c85199 255 SUPERFAMILY SSF53850 1 253 4.91E-48 T 28-03-2018 DDI_RS16025 0e007188d90f6bb747aa28ceb7c85199 255 SMART SM00062 31 254 5.2E-37 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS16025 0e007188d90f6bb747aa28ceb7c85199 255 Gene3D G3DSA:3.40.190.10 178 254 4.6E-5 T 28-03-2018 DDI_RS11975 994b6307aa98b66361716373b592ab5d 136 Pfam PF02561 Flagellar protein FliS 8 125 1.4E-37 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 DDI_RS11975 994b6307aa98b66361716373b592ab5d 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 1.7E-39 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 DDI_RS11975 994b6307aa98b66361716373b592ab5d 136 PIRSF PIRSF039090 1 135 2.2E-41 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 DDI_RS11975 994b6307aa98b66361716373b592ab5d 136 Gene3D G3DSA:1.20.120.340 2 128 5.0E-41 T 28-03-2018 DDI_RS11975 994b6307aa98b66361716373b592ab5d 136 SUPERFAMILY SSF101116 8 127 1.83E-39 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 Pfam PF00672 HAMP domain 218 263 1.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 Gene3D G3DSA:1.10.287.950 222 324 6.5E-14 T 28-03-2018 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 Gene3D G3DSA:1.10.287.950 325 520 2.0E-46 T 28-03-2018 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 Gene3D G3DSA:1.20.120.30 24 188 8.8E-24 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 SMART SM00283 269 516 1.8E-79 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 SUPERFAMILY SSF47170 29 152 1.02E-8 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 SUPERFAMILY SSF58104 236 520 1.29E-67 T 28-03-2018 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 4.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 4.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 4.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 4.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.5E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 Pfam PF02203 Tar ligand binding domain homologue 1 173 2.9E-20 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 483 3.3E-49 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15635 86755356ecb5c416e4af2c1c0d1122fa 528 SMART SM00304 216 268 7.1E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS18095 f284896d594ca79623fae1816d30eabe 209 SUPERFAMILY SSF50447 1 208 1.06E-80 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS18095 f284896d594ca79623fae1816d30eabe 209 Pfam PF00297 Ribosomal protein L3 48 182 2.6E-15 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18095 f284896d594ca79623fae1816d30eabe 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site DDI_RS18095 f284896d594ca79623fae1816d30eabe 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.4E-92 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18095 f284896d594ca79623fae1816d30eabe 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.186 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18095 f284896d594ca79623fae1816d30eabe 209 Gene3D G3DSA:4.10.960.10 57 165 2.8E-35 T 28-03-2018 DDI_RS06275 30e2a3198744874d30a8637b7d5e645c 311 Pfam PF00107 Zinc-binding dehydrogenase 145 261 7.6E-9 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DDI_RS06275 30e2a3198744874d30a8637b7d5e645c 311 Gene3D G3DSA:3.90.180.10 1 134 9.5E-21 T 28-03-2018 DDI_RS06275 30e2a3198744874d30a8637b7d5e645c 311 SMART SM00829 10 268 3.2E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DDI_RS06275 30e2a3198744874d30a8637b7d5e645c 311 SUPERFAMILY SSF51735 104 264 1.13E-25 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS06275 30e2a3198744874d30a8637b7d5e645c 311 Gene3D G3DSA:3.40.50.720 135 256 1.9E-19 T 28-03-2018 DDI_RS06275 30e2a3198744874d30a8637b7d5e645c 311 SUPERFAMILY SSF50129 1 137 1.32E-19 T 28-03-2018 IPR011032 GroES-like DDI_RS03010 e17092667a59fde632bb873f8b487ba0 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DDI_RS03010 e17092667a59fde632bb873f8b487ba0 293 Gene3D G3DSA:3.40.50.1100 130 293 1.1E-45 T 28-03-2018 DDI_RS03010 e17092667a59fde632bb873f8b487ba0 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 1.4E-67 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS03010 e17092667a59fde632bb873f8b487ba0 293 Gene3D G3DSA:3.40.50.1100 18 129 1.1E-35 T 28-03-2018 DDI_RS03010 e17092667a59fde632bb873f8b487ba0 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 6.8E-148 T 28-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DDI_RS03010 e17092667a59fde632bb873f8b487ba0 293 SUPERFAMILY SSF53686 4 289 1.44E-93 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS03010 e17092667a59fde632bb873f8b487ba0 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 6.4E-120 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DDI_RS13260 df1f4b65451d7ec3feb921e67c179112 435 Gene3D G3DSA:1.10.3720.10 191 428 3.9E-42 T 28-03-2018 DDI_RS13260 df1f4b65451d7ec3feb921e67c179112 435 SUPERFAMILY SSF160964 130 187 4.58E-9 T 28-03-2018 DDI_RS13260 df1f4b65451d7ec3feb921e67c179112 435 SUPERFAMILY SSF161098 183 418 2.35E-54 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13260 df1f4b65451d7ec3feb921e67c179112 435 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 419 4.6E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13260 df1f4b65451d7ec3feb921e67c179112 435 Gene3D G3DSA:1.20.58.370 15 167 6.6E-11 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain DDI_RS10110 88308eca94274afec0b43af7c66bf4e1 75 Pfam PF04023 FeoA domain 1 70 2.4E-12 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DDI_RS10110 88308eca94274afec0b43af7c66bf4e1 75 Gene3D G3DSA:2.30.30.90 1 75 2.2E-14 T 28-03-2018 DDI_RS10110 88308eca94274afec0b43af7c66bf4e1 75 SUPERFAMILY SSF50037 6 74 1.65E-16 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal DDI_RS10110 88308eca94274afec0b43af7c66bf4e1 75 SMART SM00899 1 74 1.5E-16 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 159 1.7E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 256 302 2.3E-17 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 Gene3D G3DSA:2.10.109.10 76 318 2.2E-56 T 28-03-2018 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 SUPERFAMILY SSF51306 78 321 2.09E-77 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 Pfam PF00717 Peptidase S24-like 86 159 8.4E-21 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 Pfam PF10502 Signal peptidase, peptidase S26 256 300 2.2E-7 T 28-03-2018 IPR019533 Peptidase S26 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 262 281 6.8E-26 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.8E-26 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.8E-26 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 ProSitePatterns PS00761 Signal peptidases I signature 3. 267 280 - T 28-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DDI_RS14275 cab7ec0654c69dc26934648f69f653c9 322 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DDI_RS05260 93f60a0ea88e538e58affa258250460b 489 SUPERFAMILY SSF52540 250 479 9.52E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05260 93f60a0ea88e538e58affa258250460b 489 Gene3D G3DSA:3.40.50.300 2 240 2.9E-32 T 28-03-2018 DDI_RS05260 93f60a0ea88e538e58affa258250460b 489 Gene3D G3DSA:3.40.50.300 241 480 6.9E-41 T 28-03-2018 DDI_RS05260 93f60a0ea88e538e58affa258250460b 489 Pfam PF00005 ABC transporter 24 163 1.6E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS05260 93f60a0ea88e538e58affa258250460b 489 Pfam PF00005 ABC transporter 276 429 5.7E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS05260 93f60a0ea88e538e58affa258250460b 489 SUPERFAMILY SSF52540 14 225 7.05E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05260 93f60a0ea88e538e58affa258250460b 489 SMART SM00382 285 480 5.9E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05260 93f60a0ea88e538e58affa258250460b 489 SMART SM00382 28 211 5.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 223 282 9.1E-20 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 SUPERFAMILY SSF81301 34 192 5.99E-40 T 28-03-2018 DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 Pfam PF12626 Polymerase A arginine-rich C-terminus 340 459 7.4E-42 T 28-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 Gene3D G3DSA:3.30.460.10 28 192 8.2E-52 T 28-03-2018 DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 31 461 4.0E-159 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 16 462 38.816 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 SUPERFAMILY SSF81891 193 430 1.26E-50 T 28-03-2018 DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 Gene3D G3DSA:1.10.3090.10 193 436 1.4E-43 T 28-03-2018 DDI_RS14520 8d64e077d005d45e8584fa619b4d1c8f 467 Pfam PF01743 Poly A polymerase head domain 62 195 7.5E-40 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DDI_RS05370 ba0e919fd47268ab6986a61f1ac02ff5 726 Pfam PF02706 Chain length determinant protein 16 107 3.7E-21 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DDI_RS05370 ba0e919fd47268ab6986a61f1ac02ff5 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 447 8.0E-33 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain DDI_RS05370 ba0e919fd47268ab6986a61f1ac02ff5 726 Gene3D G3DSA:3.40.50.300 526 718 4.4E-30 T 28-03-2018 DDI_RS05370 ba0e919fd47268ab6986a61f1ac02ff5 726 Gene3D G3DSA:3.30.1890.10 46 423 4.1E-72 T 28-03-2018 DDI_RS05370 ba0e919fd47268ab6986a61f1ac02ff5 726 SUPERFAMILY SSF52540 527 703 3.37E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05370 ba0e919fd47268ab6986a61f1ac02ff5 726 Pfam PF13614 AAA domain 537 653 5.9E-10 T 28-03-2018 IPR025669 AAA domain DDI_RS05370 ba0e919fd47268ab6986a61f1ac02ff5 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 509 710 1.2E-47 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 PIRSF PIRSF002191 1 115 2.1E-50 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 SUPERFAMILY SSF50104 2 114 1.4E-47 T 28-03-2018 IPR008991 Translation protein SH3-like domain DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.237 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 6.2E-53 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS14740 a8178967b31ecc099e40f879d2dec21a 115 Pfam PF01245 Ribosomal protein L19 3 113 1.1E-49 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 SMART SM00345 11 69 2.2E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 8.5E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 8.5E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 SUPERFAMILY SSF46785 4 73 1.05E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 Pfam PF07702 UTRA domain 91 227 2.9E-36 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 SUPERFAMILY SSF64288 57 232 3.93E-43 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 Gene3D G3DSA:3.40.1410.10 69 234 4.0E-36 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 Gene3D G3DSA:1.10.10.10 1 68 7.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 SMART SM00866 90 229 1.8E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS15955 cb94c3ad9b144090b963de1b159bec6a 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 3.3E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15650 6109c062a23549c55e4e3a8371cce3f0 1257 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 921 1257 2.2E-68 T 28-03-2018 IPR007452 Translocation and assembly module TamB DDI_RS14630 d5b5070dacd1a7548811b32f8715106a 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 37.591 T 28-03-2018 IPR022892 Ribonuclease HI GO:0004523 DDI_RS14630 d5b5070dacd1a7548811b32f8715106a 154 SUPERFAMILY SSF53098 4 143 5.56E-58 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS14630 d5b5070dacd1a7548811b32f8715106a 154 Pfam PF00075 RNase H 3 141 2.0E-53 T 28-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DDI_RS14630 d5b5070dacd1a7548811b32f8715106a 154 Gene3D G3DSA:3.30.420.10 1 152 1.2E-52 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS06530 78b9d6d160cc1758898d9ea2887e7bf3 199 SUPERFAMILY SSF48498 77 189 5.01E-20 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS06530 78b9d6d160cc1758898d9ea2887e7bf3 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.2E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS06530 78b9d6d160cc1758898d9ea2887e7bf3 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.2E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS06530 78b9d6d160cc1758898d9ea2887e7bf3 199 Gene3D G3DSA:1.10.10.60 6 60 3.5E-13 T 28-03-2018 DDI_RS06530 78b9d6d160cc1758898d9ea2887e7bf3 199 Gene3D G3DSA:1.10.357.10 61 187 2.9E-20 T 28-03-2018 DDI_RS06530 78b9d6d160cc1758898d9ea2887e7bf3 199 SUPERFAMILY SSF46689 5 73 3.01E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS06530 78b9d6d160cc1758898d9ea2887e7bf3 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 1.4E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS08380 1c2edff45739ed7070171515f66f8129 259 Gene3D G3DSA:3.40.50.620 75 215 8.4E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS08380 1c2edff45739ed7070171515f66f8129 259 Pfam PF02698 DUF218 domain 82 243 6.3E-27 T 28-03-2018 IPR003848 Domain of unknown function DUF218 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 1.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 1.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 1.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 1.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 Pfam PF02203 Tar ligand binding domain homologue 3 169 2.0E-15 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 Gene3D G3DSA:1.10.287.950 236 318 2.3E-10 T 28-03-2018 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 SMART SM00283 267 514 8.3E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 SUPERFAMILY SSF58104 257 516 5.1E-70 T 28-03-2018 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 Gene3D G3DSA:1.20.120.30 33 176 9.9E-23 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 Gene3D G3DSA:1.10.287.950 319 518 4.8E-46 T 28-03-2018 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 SUPERFAMILY SSF47170 65 151 4.45E-6 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07870 99cf37c605ae7984315841902ed5ef33 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 482 1.3E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS20060 dc7a71746ecc0661a71cc1cc9268dbf2 88 Pfam PF00550 Phosphopantetheine attachment site 8 62 1.9E-6 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS20060 dc7a71746ecc0661a71cc1cc9268dbf2 88 SUPERFAMILY SSF47336 2 83 1.44E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS20060 dc7a71746ecc0661a71cc1cc9268dbf2 88 Gene3D G3DSA:1.10.1200.10 2 86 1.6E-15 T 28-03-2018 DDI_RS11680 f3ac0d8f3ad3032602cff606e03fdfd3 180 SUPERFAMILY SSF53474 2 176 8.16E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS11680 f3ac0d8f3ad3032602cff606e03fdfd3 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 3.9E-67 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DDI_RS11680 f3ac0d8f3ad3032602cff606e03fdfd3 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 51.457 T 28-03-2018 IPR022987 Uncharacterised protein family UPF0227 DDI_RS02340 6e66048e5c12243ae52ae53dd6e1ec33 135 SUPERFAMILY SSF51230 4 128 1.23E-45 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS02340 6e66048e5c12243ae52ae53dd6e1ec33 135 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDI_RS02340 6e66048e5c12243ae52ae53dd6e1ec33 135 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.41 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DDI_RS02340 6e66048e5c12243ae52ae53dd6e1ec33 135 Pfam PF01597 Glycine cleavage H-protein 8 128 1.5E-48 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate DDI_RS02340 6e66048e5c12243ae52ae53dd6e1ec33 135 Gene3D G3DSA:2.40.50.100 6 131 1.2E-48 T 28-03-2018 DDI_RS02340 6e66048e5c12243ae52ae53dd6e1ec33 135 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 130 1.9E-55 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DDI_RS00445 342913cf2c1c3be6120240a570d0f89a 275 Gene3D G3DSA:3.60.21.10 5 272 4.3E-40 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS00445 342913cf2c1c3be6120240a570d0f89a 275 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 3.4E-20 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDI_RS00445 342913cf2c1c3be6120240a570d0f89a 275 SUPERFAMILY SSF56300 15 272 5.93E-63 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS00445 342913cf2c1c3be6120240a570d0f89a 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 39.657 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 DDI_RS00445 342913cf2c1c3be6120240a570d0f89a 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 1.0E-22 T 28-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 DDI_RS04075 44f58fe5c371ba1e13a916b07240306b 410 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 1.3E-72 T 28-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 DDI_RS04075 44f58fe5c371ba1e13a916b07240306b 410 SUPERFAMILY SSF56300 1 341 2.07E-59 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS04075 44f58fe5c371ba1e13a916b07240306b 410 Pfam PF00149 Calcineurin-like phosphoesterase 1 99 4.9E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDI_RS04075 44f58fe5c371ba1e13a916b07240306b 410 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 283 379 5.7E-23 T 28-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain DDI_RS04075 44f58fe5c371ba1e13a916b07240306b 410 Gene3D G3DSA:3.60.21.10 1 65 7.9E-16 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS04075 44f58fe5c371ba1e13a916b07240306b 410 Gene3D G3DSA:3.60.21.10 66 283 4.5E-22 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS01525 b3dc531a16fab9d1c4798293c241cece 191 Gene3D G3DSA:1.10.357.10 48 180 2.6E-10 T 28-03-2018 DDI_RS01525 b3dc531a16fab9d1c4798293c241cece 191 SUPERFAMILY SSF46689 3 59 4.72E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS01525 b3dc531a16fab9d1c4798293c241cece 191 Gene3D G3DSA:1.10.10.60 1 47 5.7E-12 T 28-03-2018 DDI_RS01525 b3dc531a16fab9d1c4798293c241cece 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 49 3.1E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS21085 1fb35bdb434909f7b7980773904f3ff1 221 SUPERFAMILY SSF47781 13 85 2.45E-7 T 28-03-2018 IPR010994 RuvA domain 2-like DDI_RS21085 1fb35bdb434909f7b7980773904f3ff1 221 TIGRFAM TIGR00608 radc: DNA repair protein RadC 9 221 2.9E-81 T 28-03-2018 IPR001405 RadC protein DDI_RS21085 1fb35bdb434909f7b7980773904f3ff1 221 Pfam PF04002 RadC-like JAB domain 103 219 1.9E-45 T 28-03-2018 IPR025657 RadC-like JAB domain DDI_RS21085 1fb35bdb434909f7b7980773904f3ff1 221 Hamap MF_00018 UPF0758 protein YicR [yicR]. 1 221 52.71 T 28-03-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily DDI_RS21085 1fb35bdb434909f7b7980773904f3ff1 221 Gene3D G3DSA:3.40.140.10 96 221 2.0E-47 T 28-03-2018 DDI_RS21085 1fb35bdb434909f7b7980773904f3ff1 221 SUPERFAMILY SSF102712 114 186 6.02E-5 T 28-03-2018 DDI_RS21085 1fb35bdb434909f7b7980773904f3ff1 221 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 170 175 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DDI_RS03145 f052c575c67de9de775422c643eee639 116 Gene3D G3DSA:3.30.2420.10 32 109 5.9E-5 T 28-03-2018 DDI_RS03145 f052c575c67de9de775422c643eee639 116 Pfam PF04205 FMN-binding domain 38 110 4.9E-11 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDI_RS03145 f052c575c67de9de775422c643eee639 116 SMART SM00900 38 113 1.4E-10 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDI_RS07080 6d620c9f7168dbde133e0ef39ce663fd 55 Pfam PF01679 Proteolipid membrane potential modulator 3 48 2.3E-17 T 28-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 DDI_RS12540 2ef99c82769baddd1084bce4115a3bf1 308 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 304 5.4E-121 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DDI_RS12540 2ef99c82769baddd1084bce4115a3bf1 308 PIRSF PIRSF018296 1 308 5.3E-128 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DDI_RS12540 2ef99c82769baddd1084bce4115a3bf1 308 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 303 4.1E-114 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DDI_RS12540 2ef99c82769baddd1084bce4115a3bf1 308 Hamap MF_00611 Protein FdhE [fdhE]. 3 305 46.379 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DDI_RS12540 2ef99c82769baddd1084bce4115a3bf1 308 SUPERFAMILY SSF144020 25 305 5.62E-93 T 28-03-2018 IPR024064 FdhE-like DDI_RS12540 2ef99c82769baddd1084bce4115a3bf1 308 Gene3D G3DSA:3.90.1670.10 25 307 2.9E-98 T 28-03-2018 IPR024064 FdhE-like DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 Gene3D G3DSA:3.40.1410.10 81 239 2.9E-34 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 SUPERFAMILY SSF64288 61 238 1.04E-38 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 SUPERFAMILY SSF46785 7 81 6.26E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 SMART SM00345 15 73 7.6E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 6.4E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 SMART SM00866 94 234 7.7E-30 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 Gene3D G3DSA:1.10.10.10 1 74 2.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 Pfam PF07702 UTRA domain 94 233 1.3E-30 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 9 239 1.8E-80 T 28-03-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 5.8E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS06000 43577d0d59da5e1a71ef15fd276aea69 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 5.8E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS12885 348be6760aef9a16b9c2b2187ef76ab6 142 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 6 137 4.0E-17 T 28-03-2018 IPR009936 Protein of unknown function DUF1468 DDI_RS20655 e1a9031c37864e3c379a736763b5dd19 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 384 1.2E-49 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS20655 e1a9031c37864e3c379a736763b5dd19 394 Gene3D G3DSA:1.10.3470.10 51 389 9.4E-26 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS02065 f51e22bce24ada1b70375735d56d264d 103 SUPERFAMILY SSF141091 1 102 2.09E-37 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02065 f51e22bce24ada1b70375735d56d264d 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.6E-38 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02065 f51e22bce24ada1b70375735d56d264d 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.825 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02065 f51e22bce24ada1b70375735d56d264d 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 28-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS02065 f51e22bce24ada1b70375735d56d264d 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.1E-45 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17675 c7d285ac23db9ea85d2bc13ae5e794fa 239 SUPERFAMILY SSF53474 8 230 1.39E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS17675 c7d285ac23db9ea85d2bc13ae5e794fa 239 Gene3D G3DSA:3.40.50.1820 6 235 8.5E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS17675 c7d285ac23db9ea85d2bc13ae5e794fa 239 Pfam PF00975 Thioesterase domain 7 232 3.6E-22 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 DDI_RS12735 b7d29a5fef8d0e9752e96845bddb2eb0 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 44.876 T 28-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 DDI_RS12735 b7d29a5fef8d0e9752e96845bddb2eb0 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 185 9.0E-37 T 28-03-2018 DDI_RS12735 b7d29a5fef8d0e9752e96845bddb2eb0 199 Gene3D G3DSA:1.10.3210.10 1 199 2.5E-51 T 28-03-2018 DDI_RS12735 b7d29a5fef8d0e9752e96845bddb2eb0 199 SMART SM00471 26 151 2.6E-5 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS12735 b7d29a5fef8d0e9752e96845bddb2eb0 199 SUPERFAMILY SSF109604 4 185 1.08E-43 T 28-03-2018 DDI_RS12735 b7d29a5fef8d0e9752e96845bddb2eb0 199 Pfam PF13023 HD domain 11 159 6.2E-17 T 28-03-2018 IPR006674 HD domain DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 PIRSF PIRSF006076 1 805 1.6E-255 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Gene3D G3DSA:3.10.20.310 350 388 0.0023 T 28-03-2018 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Gene3D G3DSA:3.10.20.310 21 91 2.7E-6 T 28-03-2018 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Gene3D G3DSA:3.10.20.310 175 265 1.2E-20 T 28-03-2018 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Gene3D G3DSA:3.10.20.310 92 174 3.7E-11 T 28-03-2018 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Gene3D G3DSA:2.40.160.50 389 805 5.8E-90 T 28-03-2018 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 805 25.851 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 805 1.7E-284 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Pfam PF01103 Surface antigen 448 805 5.8E-100 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Pfam PF07244 Surface antigen variable number repeat 266 344 2.8E-11 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Pfam PF07244 Surface antigen variable number repeat 92 172 2.5E-10 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Pfam PF07244 Surface antigen variable number repeat 348 421 5.1E-14 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Pfam PF07244 Surface antigen variable number repeat 176 263 1.2E-15 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDI_RS03765 ca4d752aae6b596c88b2cbaf86202061 805 Gene3D G3DSA:3.10.20.310 266 346 1.9E-11 T 28-03-2018 DDI_RS18880 0459e11a4e219af42ff3d3d436ab403c 604 Gene3D G3DSA:2.160.20.10 149 604 5.9E-84 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS18880 0459e11a4e219af42ff3d3d436ab403c 604 ProSitePatterns PS00502 Polygalacturonase active site. 423 437 - T 28-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 DDI_RS18880 0459e11a4e219af42ff3d3d436ab403c 604 SUPERFAMILY SSF49265 33 150 7.62E-10 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 DDI_RS18880 0459e11a4e219af42ff3d3d436ab403c 604 Pfam PF00295 Glycosyl hydrolases family 28 320 562 1.1E-24 T 28-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 DDI_RS18880 0459e11a4e219af42ff3d3d436ab403c 604 Gene3D G3DSA:2.60.40.10 33 148 8.3E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS18880 0459e11a4e219af42ff3d3d436ab403c 604 SMART SM00060 32 136 3.4E-5 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 DDI_RS18880 0459e11a4e219af42ff3d3d436ab403c 604 SUPERFAMILY SSF51126 143 562 9.19E-72 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS03590 ec48d1f3072605b407556280b2f7a60a 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS03590 ec48d1f3072605b407556280b2f7a60a 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 4.0E-4 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS03590 ec48d1f3072605b407556280b2f7a60a 197 PIRSF PIRSF004525 1 197 3.6E-53 T 28-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted DDI_RS01670 799e571e193425b2ae91bc26099c8a30 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 53.716 T 28-03-2018 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 DDI_RS01670 799e571e193425b2ae91bc26099c8a30 483 SUPERFAMILY SSF51735 2 260 3.15E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS01670 799e571e193425b2ae91bc26099c8a30 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 3.0E-30 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DDI_RS01670 799e571e193425b2ae91bc26099c8a30 483 Gene3D G3DSA:1.10.1040.10 272 483 1.1E-60 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS01670 799e571e193425b2ae91bc26099c8a30 483 Gene3D G3DSA:3.40.50.720 1 268 4.3E-63 T 28-03-2018 DDI_RS01670 799e571e193425b2ae91bc26099c8a30 483 SUPERFAMILY SSF48179 273 482 3.74E-50 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS01670 799e571e193425b2ae91bc26099c8a30 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 457 7.4E-70 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DDI_RS09500 ad4c0867c7de2dd234e6f58f22e18401 297 SUPERFAMILY SSF46785 7 87 3.76E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09500 ad4c0867c7de2dd234e6f58f22e18401 297 Gene3D G3DSA:3.40.190.10 180 260 1.4E-11 T 28-03-2018 DDI_RS09500 ad4c0867c7de2dd234e6f58f22e18401 297 Pfam PF03466 LysR substrate binding domain 93 293 9.9E-26 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS09500 ad4c0867c7de2dd234e6f58f22e18401 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.6E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS09500 ad4c0867c7de2dd234e6f58f22e18401 297 Gene3D G3DSA:1.10.10.10 1 88 1.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09500 ad4c0867c7de2dd234e6f58f22e18401 297 SUPERFAMILY SSF53850 97 295 6.36E-25 T 28-03-2018 DDI_RS09500 ad4c0867c7de2dd234e6f58f22e18401 297 Gene3D G3DSA:3.40.190.10 93 179 1.3E-11 T 28-03-2018 DDI_RS11185 ef95017664cee6dc5280777dc50a402e 220 PIRSF PIRSF000190 3 220 1.7E-82 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDI_RS11185 ef95017664cee6dc5280777dc50a402e 220 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 41 123 1.5E-21 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDI_RS11185 ef95017664cee6dc5280777dc50a402e 220 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 220 1.6E-97 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDI_RS11185 ef95017664cee6dc5280777dc50a402e 220 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 18 220 37.622 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDI_RS11185 ef95017664cee6dc5280777dc50a402e 220 Gene3D G3DSA:2.30.110.10 19 220 8.1E-67 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS11185 ef95017664cee6dc5280777dc50a402e 220 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 190 203 - T 28-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDI_RS11185 ef95017664cee6dc5280777dc50a402e 220 SUPERFAMILY SSF50475 23 220 6.09E-65 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS11185 ef95017664cee6dc5280777dc50a402e 220 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 180 220 4.7E-18 T 28-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDI_RS18405 610da8434991d49ce2256dfe1de9f1d0 297 Pfam PF11104 Type IV pilus assembly protein PilM; 9 167 2.8E-11 T 28-03-2018 IPR005883 Type IV pilus assembly protein PilM DDI_RS18405 610da8434991d49ce2256dfe1de9f1d0 297 Gene3D G3DSA:3.30.420.40 6 162 2.2E-12 T 28-03-2018 DDI_RS18405 610da8434991d49ce2256dfe1de9f1d0 297 SUPERFAMILY SSF53067 17 165 1.81E-9 T 28-03-2018 DDI_RS16345 93e492a7f5418b358ab9cc61d3a85145 182 PIRSF PIRSF002070 2 166 8.2E-38 T 28-03-2018 DDI_RS16345 93e492a7f5418b358ab9cc61d3a85145 182 SUPERFAMILY SSF50249 4 182 1.44E-63 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS16345 93e492a7f5418b358ab9cc61d3a85145 182 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 182 4.6E-61 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DDI_RS16345 93e492a7f5418b358ab9cc61d3a85145 182 Gene3D G3DSA:2.40.50.140 1 118 1.5E-46 T 28-03-2018 DDI_RS16345 93e492a7f5418b358ab9cc61d3a85145 182 Pfam PF00436 Single-strand binding protein family 6 112 2.2E-42 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DDI_RS16345 93e492a7f5418b358ab9cc61d3a85145 182 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 38.997 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DDI_RS04560 c295a63137e93369e044cde558b1b13b 442 SUPERFAMILY SSF56322 26 437 6.8E-98 T 28-03-2018 IPR005801 ADC synthase GO:0009058 DDI_RS04560 c295a63137e93369e044cde558b1b13b 442 Gene3D G3DSA:3.60.120.10 3 439 1.5E-99 T 28-03-2018 IPR005801 ADC synthase GO:0009058 DDI_RS04560 c295a63137e93369e044cde558b1b13b 442 Pfam PF00425 chorismate binding enzyme 178 429 3.1E-64 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DDI_RS04560 c295a63137e93369e044cde558b1b13b 442 Hamap MF_01935 Isochorismate synthase MenF [menF]. 5 439 30.316 T 28-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 DDI_RS04560 c295a63137e93369e044cde558b1b13b 442 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 95 435 8.2E-101 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 DDI_RS00820 7abb622b261c8b6e40f4cd5aa37b266f 71 Gene3D G3DSA:1.10.260.40 1 69 9.2E-7 T 28-03-2018 DDI_RS00820 7abb622b261c8b6e40f4cd5aa37b266f 71 SUPERFAMILY SSF47413 17 62 8.94E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS13570 dd25ac3b3870d1c7a53c81dfe7f36f6f 107 Gene3D G3DSA:2.30.30.390 1 105 5.9E-18 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 DDI_RS13570 dd25ac3b3870d1c7a53c81dfe7f36f6f 107 SUPERFAMILY SSF141255 4 98 4.32E-27 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 DDI_RS13570 dd25ac3b3870d1c7a53c81dfe7f36f6f 107 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 100 1.6E-29 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 DDI_RS13570 dd25ac3b3870d1c7a53c81dfe7f36f6f 107 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 97 6.3E-18 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 DDI_RS13570 dd25ac3b3870d1c7a53c81dfe7f36f6f 107 SMART SM00992 3 104 7.7E-29 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.9E-75 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 Pfam PF02978 Signal peptide binding domain 329 427 2.8E-32 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 SUPERFAMILY SSF52540 42 353 9.67E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 Gene3D G3DSA:1.20.120.140 211 310 1.5E-32 T 28-03-2018 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.9E-22 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.649 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 3.2E-179 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 SMART SM00382 99 247 1.0E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 SMART SM00962 100 296 1.2E-117 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 Gene3D G3DSA:3.40.50.300 99 210 8.1E-16 T 28-03-2018 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 Gene3D G3DSA:1.10.260.30 328 432 1.6E-37 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 Gene3D G3DSA:1.20.120.140 1 91 1.7E-29 T 28-03-2018 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 SMART SM00963 1 86 2.0E-36 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDI_RS14760 73b2c561ba1e1589e318c80d534b6c5c 453 SUPERFAMILY SSF47446 329 431 5.72E-38 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 Pfam PF01022 Bacterial regulatory protein, arsR family 14 59 1.1E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 SMART SM00418 7 85 1.2E-29 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 31 49 - T 28-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 SUPERFAMILY SSF46785 3 104 6.51E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 Gene3D G3DSA:1.10.10.10 3 106 4.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 1.3E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.3E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.3E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS05705 e501b72ae6b2a1737d323e9d832e3e8d 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.3E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS14925 49004c72009c761548a033ec25d2798e 257 Pfam PF07702 UTRA domain 114 246 2.0E-26 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS14925 49004c72009c761548a033ec25d2798e 257 Gene3D G3DSA:1.10.10.10 14 90 3.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14925 49004c72009c761548a033ec25d2798e 257 SUPERFAMILY SSF46785 20 92 1.74E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14925 49004c72009c761548a033ec25d2798e 257 SUPERFAMILY SSF64288 76 256 7.54E-33 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS14925 49004c72009c761548a033ec25d2798e 257 Gene3D G3DSA:3.40.1410.10 92 257 2.0E-28 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DDI_RS14925 49004c72009c761548a033ec25d2798e 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 1.8E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS14925 49004c72009c761548a033ec25d2798e 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 1.8E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS14925 49004c72009c761548a033ec25d2798e 257 SMART SM00866 111 251 1.2E-23 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDI_RS14925 49004c72009c761548a033ec25d2798e 257 SMART SM00345 29 88 3.9E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS14925 49004c72009c761548a033ec25d2798e 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 88 1.4E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 SUPERFAMILY SSF55973 111 232 9.42E-52 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 Gene3D G3DSA:3.30.300.10 134 233 5.4E-43 T 28-03-2018 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 Gene3D G3DSA:3.30.300.10 11 133 3.9E-45 T 28-03-2018 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 1.3E-69 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 4.8E-200 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.2E-43 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 SUPERFAMILY SSF55973 3 109 1.29E-47 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 SUPERFAMILY SSF55973 233 382 8.24E-72 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 Gene3D G3DSA:3.30.300.10 246 383 3.6E-49 T 28-03-2018 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.845 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 PIRSF PIRSF000497 1 382 2.1E-175 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS17205 6198870727336b666e519a75355fd0fd 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.5E-45 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDI_RS10410 007f337b61187a1052e8116994b1b457 418 SUPERFAMILY SSF54373 272 362 1.44E-16 T 28-03-2018 DDI_RS10410 007f337b61187a1052e8116994b1b457 418 Pfam PF01266 FAD dependent oxidoreductase 3 399 6.4E-66 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDI_RS10410 007f337b61187a1052e8116994b1b457 418 SUPERFAMILY SSF51905 1 54 8.55E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS10410 007f337b61187a1052e8116994b1b457 418 SUPERFAMILY SSF51905 107 272 8.55E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS10410 007f337b61187a1052e8116994b1b457 418 SUPERFAMILY SSF51905 362 415 8.55E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS10410 007f337b61187a1052e8116994b1b457 418 Gene3D G3DSA:3.30.9.10 135 215 7.5E-9 T 28-03-2018 DDI_RS10410 007f337b61187a1052e8116994b1b457 418 Gene3D G3DSA:3.30.9.10 216 361 8.6E-27 T 28-03-2018 DDI_RS10410 007f337b61187a1052e8116994b1b457 418 Gene3D G3DSA:3.40.50.720 1 133 3.2E-9 T 28-03-2018 DDI_RS01335 5f5285fb0f6f685ac3e336b423880d73 312 Gene3D G3DSA:1.10.10.10 6 89 1.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01335 5f5285fb0f6f685ac3e336b423880d73 312 SUPERFAMILY SSF46785 9 106 5.03E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01335 5f5285fb0f6f685ac3e336b423880d73 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 1.2E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS01335 5f5285fb0f6f685ac3e336b423880d73 312 SUPERFAMILY SSF53850 92 300 3.62E-36 T 28-03-2018 DDI_RS01335 5f5285fb0f6f685ac3e336b423880d73 312 Pfam PF03466 LysR substrate binding domain 90 295 2.0E-35 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS01335 5f5285fb0f6f685ac3e336b423880d73 312 Gene3D G3DSA:3.40.190.10 90 178 3.7E-18 T 28-03-2018 DDI_RS01335 5f5285fb0f6f685ac3e336b423880d73 312 Gene3D G3DSA:3.40.190.10 179 269 7.4E-19 T 28-03-2018 DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 Gene3D G3DSA:3.30.70.920 70 164 2.3E-20 T 28-03-2018 DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 SUPERFAMILY SSF54909 80 163 5.77E-17 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 Gene3D G3DSA:1.10.10.10 18 69 8.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 34 1.9E-9 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 45 1.9E-9 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 45 64 1.9E-9 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 SMART SM00344 18 127 9.4E-44 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 Pfam PF13412 Winged helix-turn-helix DNA-binding 18 65 4.4E-16 T 28-03-2018 DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 Pfam PF01037 Lrp/AsnC ligand binding domain 84 157 7.6E-18 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DDI_RS01105 b90ae132177965cfa97cf86dbe4d7b26 167 SUPERFAMILY SSF46785 17 76 1.07E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08005 8253c31a95e12c8b71aba0c78ab6e138 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 244 1.0E-67 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS08005 8253c31a95e12c8b71aba0c78ab6e138 246 SMART SM00062 24 246 1.4E-83 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS08005 8253c31a95e12c8b71aba0c78ab6e138 246 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 243 5.2E-85 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 DDI_RS08005 8253c31a95e12c8b71aba0c78ab6e138 246 Gene3D G3DSA:3.40.190.10 8 146 2.9E-37 T 28-03-2018 DDI_RS08005 8253c31a95e12c8b71aba0c78ab6e138 246 SUPERFAMILY SSF53850 1 245 1.09E-71 T 28-03-2018 DDI_RS08005 8253c31a95e12c8b71aba0c78ab6e138 246 SMART SM00079 24 245 3.8E-4 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DDI_RS08005 8253c31a95e12c8b71aba0c78ab6e138 246 Gene3D G3DSA:3.40.190.10 147 246 1.7E-17 T 28-03-2018 DDI_RS08005 8253c31a95e12c8b71aba0c78ab6e138 246 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 Gene3D G3DSA:1.10.10.60 285 322 4.2E-7 T 28-03-2018 DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 108 123 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 SUPERFAMILY SSF52540 32 250 3.05E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 Gene3D G3DSA:3.40.50.300 26 194 9.7E-27 T 28-03-2018 DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 SUPERFAMILY SSF46689 234 321 3.09E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 Gene3D G3DSA:1.10.8.60 195 284 1.0E-15 T 28-03-2018 DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 Pfam PF00158 Sigma-54 interaction domain 34 189 1.5E-57 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 SMART SM00382 43 185 1.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 47 60 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS10315 42ea8973047f3e10749719e1a29b3047 327 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 235 244 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS18155 11d21b7f2f79387ca278c9715f7f89ad 547 Pfam PF08019 Domain of unknown function (DUF1705) 59 210 6.8E-45 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 DDI_RS18155 11d21b7f2f79387ca278c9715f7f89ad 547 SUPERFAMILY SSF53649 237 533 2.45E-23 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS18155 11d21b7f2f79387ca278c9715f7f89ad 547 Gene3D G3DSA:3.40.720.10 242 541 1.1E-23 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 DDI_RS18155 11d21b7f2f79387ca278c9715f7f89ad 547 Pfam PF00884 Sulfatase 239 527 1.6E-51 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 Gene3D G3DSA:3.50.50.60 2 252 2.8E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 SUPERFAMILY SSF51905 264 379 6.18E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 SUPERFAMILY SSF51905 3 175 6.18E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 387 3.3E-120 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 7.3E-18 T 28-03-2018 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 7.3E-18 T 28-03-2018 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 7.3E-18 T 28-03-2018 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 7.3E-18 T 28-03-2018 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 Gene3D G3DSA:3.50.50.60 253 384 1.0E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS04915 e31412281c5c70ebd1eaa49baf546e83 388 Pfam PF01494 FAD binding domain 4 337 5.6E-22 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 DDI_RS05585 bc34b1a64bd210d04bc22f3b3dfd19b5 134 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 8 127 1.5E-10 T 28-03-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 DDI_RS05585 bc34b1a64bd210d04bc22f3b3dfd19b5 134 SUPERFAMILY SSF54427 5 130 5.08E-29 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS05585 bc34b1a64bd210d04bc22f3b3dfd19b5 134 Gene3D G3DSA:3.10.450.50 1 134 1.2E-19 T 28-03-2018 DDI_RS05585 bc34b1a64bd210d04bc22f3b3dfd19b5 134 Pfam PF12680 SnoaL-like domain 18 106 2.5E-9 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain DDI_RS17805 b730157c3f2a939fad9e7751d005a61b 114 Pfam PF13698 Domain of unknown function (DUF4156) 22 113 7.9E-31 T 28-03-2018 IPR025294 Protein of unknown function DUF4156 DDI_RS13715 ed0b450aa47156e36b0295fc791043fa 233 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 107 2.3E-23 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS13715 ed0b450aa47156e36b0295fc791043fa 233 Gene3D G3DSA:1.10.3720.10 4 218 1.6E-30 T 28-03-2018 DDI_RS13715 ed0b450aa47156e36b0295fc791043fa 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 211 2.0E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13715 ed0b450aa47156e36b0295fc791043fa 233 SUPERFAMILY SSF161098 13 198 1.83E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15135 31c0176ffe569ca2ca9844a8302e7ee9 343 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 328 1.1E-123 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DDI_RS15135 31c0176ffe569ca2ca9844a8302e7ee9 343 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 340 36.463 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DDI_RS15135 31c0176ffe569ca2ca9844a8302e7ee9 343 Gene3D G3DSA:3.40.50.10470 135 339 5.1E-68 T 28-03-2018 DDI_RS15135 31c0176ffe569ca2ca9844a8302e7ee9 343 Pfam PF01008 Initiation factor 2 subunit family 48 329 6.3E-69 T 28-03-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 DDI_RS15135 31c0176ffe569ca2ca9844a8302e7ee9 343 Gene3D G3DSA:1.20.120.420 6 134 2.0E-35 T 28-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 DDI_RS15135 31c0176ffe569ca2ca9844a8302e7ee9 343 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 329 4.4E-94 T 28-03-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DDI_RS15135 31c0176ffe569ca2ca9844a8302e7ee9 343 SUPERFAMILY SSF100950 10 334 1.47E-110 T 28-03-2018 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 12 250 1.5E-104 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 6.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 6.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 6.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 162 185 5.6E-58 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 201 220 5.6E-58 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 16 33 5.6E-58 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 227 246 5.6E-58 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 97 117 5.6E-58 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 77 94 5.6E-58 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 SUPERFAMILY SSF51735 5 249 2.72E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 4.4E-48 T 28-03-2018 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 Gene3D G3DSA:3.40.50.720 45 251 7.1E-55 T 28-03-2018 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 Gene3D G3DSA:3.40.50.720 2 44 1.3E-6 T 28-03-2018 DDI_RS13090 a2fb1571a661db0005f4f0a09ebdaeda 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS03180 7e4cc4d17ffdfc24a38863770c64c4f8 328 Gene3D G3DSA:3.40.50.2300 58 181 4.1E-24 T 28-03-2018 DDI_RS03180 7e4cc4d17ffdfc24a38863770c64c4f8 328 Gene3D G3DSA:3.40.50.2300 182 308 2.4E-31 T 28-03-2018 DDI_RS03180 7e4cc4d17ffdfc24a38863770c64c4f8 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 52 2.5E-14 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS03180 7e4cc4d17ffdfc24a38863770c64c4f8 328 SUPERFAMILY SSF47413 4 61 1.41E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS03180 7e4cc4d17ffdfc24a38863770c64c4f8 328 Pfam PF13377 Periplasmic binding protein-like domain 174 328 1.3E-22 T 28-03-2018 DDI_RS03180 7e4cc4d17ffdfc24a38863770c64c4f8 328 SUPERFAMILY SSF53822 66 323 5.78E-46 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS03180 7e4cc4d17ffdfc24a38863770c64c4f8 328 SMART SM00354 5 78 7.5E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS03180 7e4cc4d17ffdfc24a38863770c64c4f8 328 Gene3D G3DSA:1.10.260.40 6 57 3.3E-18 T 28-03-2018 DDI_RS14320 6a19c65a707098cbff07738e3955868a 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 2.4E-73 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA DDI_RS14320 6a19c65a707098cbff07738e3955868a 127 SUPERFAMILY SSF51998 65 126 5.49E-24 T 28-03-2018 DDI_RS14320 6a19c65a707098cbff07738e3955868a 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.726 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA DDI_RS14320 6a19c65a707098cbff07738e3955868a 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DDI_RS14320 6a19c65a707098cbff07738e3955868a 127 Pfam PF01228 Glycine radical 13 108 1.4E-24 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 DDI_RS14320 6a19c65a707098cbff07738e3955868a 127 Gene3D G3DSA:3.20.70.20 51 127 8.3E-30 T 28-03-2018 DDI_RS14320 6a19c65a707098cbff07738e3955868a 127 PIRSF PIRSF000378 2 127 5.6E-56 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA DDI_RS01380 474e3c73b69b36542485f256d2e80080 271 SUPERFAMILY SSF161098 6 271 9.35E-66 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01380 474e3c73b69b36542485f256d2e80080 271 Gene3D G3DSA:1.10.3720.10 6 260 2.9E-37 T 28-03-2018 DDI_RS01380 474e3c73b69b36542485f256d2e80080 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 259 1.2E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15660 3dae2e3141b8f975d404c91ee0df47f2 212 Gene3D G3DSA:3.30.1060.10 26 203 9.9E-78 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDI_RS15660 3dae2e3141b8f975d404c91ee0df47f2 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 37.917 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDI_RS15660 3dae2e3141b8f975d404c91ee0df47f2 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 3.3E-67 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDI_RS15660 3dae2e3141b8f975d404c91ee0df47f2 212 SUPERFAMILY SSF55068 7 208 6.67E-83 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDI_RS15660 3dae2e3141b8f975d404c91ee0df47f2 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 1.0E-66 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDI_RS17125 99f2255367ef5bea04364136391713cf 643 SUPERFAMILY SSF53955 476 629 3.44E-47 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS17125 99f2255367ef5bea04364136391713cf 643 SUPERFAMILY SSF48435 26 474 1.57E-129 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 DDI_RS17125 99f2255367ef5bea04364136391713cf 643 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 498 526 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DDI_RS17125 99f2255367ef5bea04364136391713cf 643 Pfam PF14718 Soluble lytic murein transglycosylase L domain 406 469 4.3E-23 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 DDI_RS17125 99f2255367ef5bea04364136391713cf 643 Gene3D G3DSA:1.10.530.10 470 643 2.7E-39 T 28-03-2018 DDI_RS17125 99f2255367ef5bea04364136391713cf 643 Pfam PF01464 Transglycosylase SLT domain 481 591 1.7E-31 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 DDI_RS17125 99f2255367ef5bea04364136391713cf 643 Gene3D G3DSA:1.25.20.10 26 388 4.8E-53 T 28-03-2018 DDI_RS17125 99f2255367ef5bea04364136391713cf 643 Gene3D G3DSA:1.10.1240.20 401 469 2.5E-19 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 DDI_RS07280 1dcc2ef002f01bc9d5057b920a5612f1 311 Gene3D G3DSA:3.20.20.70 1 242 1.7E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS07280 1dcc2ef002f01bc9d5057b920a5612f1 311 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.644 T 28-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 DDI_RS07280 1dcc2ef002f01bc9d5057b920a5612f1 311 Pfam PF01207 Dihydrouridine synthase (Dus) 5 279 4.6E-87 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS07280 1dcc2ef002f01bc9d5057b920a5612f1 311 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS07280 1dcc2ef002f01bc9d5057b920a5612f1 311 PIRSF PIRSF006621 1 311 7.9E-81 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS07280 1dcc2ef002f01bc9d5057b920a5612f1 311 SUPERFAMILY SSF51395 1 308 1.68E-71 T 28-03-2018 DDI_RS21115 e4a89d56a5b3d6a31a09b85a4437cc17 425 Gene3D G3DSA:3.40.50.2000 220 403 3.9E-14 T 28-03-2018 DDI_RS21115 e4a89d56a5b3d6a31a09b85a4437cc17 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 3.0E-67 T 28-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DDI_RS21115 e4a89d56a5b3d6a31a09b85a4437cc17 425 SUPERFAMILY SSF53756 57 403 4.46E-17 T 28-03-2018 DDI_RS21115 e4a89d56a5b3d6a31a09b85a4437cc17 425 Gene3D G3DSA:3.40.50.2000 42 219 9.1E-6 T 28-03-2018 DDI_RS21115 e4a89d56a5b3d6a31a09b85a4437cc17 425 Pfam PF00534 Glycosyl transferases group 1 299 398 2.3E-9 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Gene3D G3DSA:1.10.460.10 166 344 1.5E-46 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Gene3D G3DSA:2.20.25.10 811 865 5.0E-30 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 2.7E-36 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 492 506 2.7E-36 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 108 121 2.7E-36 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 316 325 2.7E-36 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 392 408 2.7E-36 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 710 746 1.3E-9 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 599 624 1.0E-5 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Pfam PF01131 DNA topoisomerase 159 567 3.2E-128 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Gene3D G3DSA:3.30.65.10 581 648 1.9E-11 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Gene3D G3DSA:3.30.65.10 700 746 2.0E-7 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Gene3D G3DSA:3.30.65.10 747 809 3.5E-8 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 SMART SM00493 3 134 7.1E-30 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Pfam PF08272 Topoisomerase I zinc-ribbon-like 760 795 2.1E-12 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Pfam PF08272 Topoisomerase I zinc-ribbon-like 826 865 8.2E-23 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 SUPERFAMILY SSF57783 746 809 2.21E-18 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 SUPERFAMILY SSF57783 704 735 1.0E-5 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Pfam PF01751 Toprim domain 5 144 5.0E-32 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS09185 1722870fc0669747f2eae444968d8930 867 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 636 2.2E-255 T 28-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 SMART SM00436 135 223 3.7E-50 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 SMART SM00437 274 529 1.3E-120 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 SUPERFAMILY SSF57783 811 865 3.57E-22 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 SUPERFAMILY SSF56712 3 611 1.03E-203 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Gene3D G3DSA:3.40.50.140 1 165 1.2E-51 T 28-03-2018 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 725 54.579 T 28-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 Gene3D G3DSA:2.70.20.10 348 475 5.7E-38 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DDI_RS09185 1722870fc0669747f2eae444968d8930 867 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 311 325 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DDI_RS18195 cac9442c57763e2326241afca9b88882 452 Pfam PF00155 Aminotransferase class I and II 117 437 1.0E-24 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS18195 cac9442c57763e2326241afca9b88882 452 Gene3D G3DSA:1.10.10.10 9 83 2.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18195 cac9442c57763e2326241afca9b88882 452 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 81 3.0E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS18195 cac9442c57763e2326241afca9b88882 452 SMART SM00345 22 81 7.6E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS18195 cac9442c57763e2326241afca9b88882 452 SUPERFAMILY SSF46785 22 85 2.65E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18195 cac9442c57763e2326241afca9b88882 452 Gene3D G3DSA:3.40.640.10 116 358 2.3E-29 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS18195 cac9442c57763e2326241afca9b88882 452 Gene3D G3DSA:3.90.1150.10 359 440 1.7E-10 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS18195 cac9442c57763e2326241afca9b88882 452 SUPERFAMILY SSF53383 106 437 3.54E-56 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS10585 58927a0628a4c311f9684e7d7ae3c5e6 463 Gene3D G3DSA:1.20.1250.20 244 463 1.9E-21 T 28-03-2018 DDI_RS10585 58927a0628a4c311f9684e7d7ae3c5e6 463 Pfam PF07690 Major Facilitator Superfamily 46 422 3.1E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS10585 58927a0628a4c311f9684e7d7ae3c5e6 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 37 418 2.5E-107 T 28-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 DDI_RS10585 58927a0628a4c311f9684e7d7ae3c5e6 463 Gene3D G3DSA:1.20.1250.20 28 242 1.8E-14 T 28-03-2018 DDI_RS10585 58927a0628a4c311f9684e7d7ae3c5e6 463 SUPERFAMILY SSF103473 36 460 9.29E-36 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS04520 6ffed5dabdf06b8ca7341f105d7147b1 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 3.7E-47 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS04520 6ffed5dabdf06b8ca7341f105d7147b1 376 SUPERFAMILY SSF47240 3 340 5.21E-115 T 28-03-2018 IPR009078 Ferritin-like superfamily DDI_RS04520 6ffed5dabdf06b8ca7341f105d7147b1 376 Gene3D G3DSA:1.10.620.20 1 346 2.0E-114 T 28-03-2018 DDI_RS04520 6ffed5dabdf06b8ca7341f105d7147b1 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS15415 eaafb91e0c7c4e6ac8d9c8ba5de3a41f 242 Gene3D G3DSA:3.90.550.10 4 233 4.0E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS15415 eaafb91e0c7c4e6ac8d9c8ba5de3a41f 242 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DDI_RS15415 eaafb91e0c7c4e6ac8d9c8ba5de3a41f 242 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 230 9.4E-85 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DDI_RS15415 eaafb91e0c7c4e6ac8d9c8ba5de3a41f 242 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 228 43.996 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DDI_RS15415 eaafb91e0c7c4e6ac8d9c8ba5de3a41f 242 SUPERFAMILY SSF53448 11 228 1.98E-61 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS15415 eaafb91e0c7c4e6ac8d9c8ba5de3a41f 242 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 228 8.0E-76 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 Gene3D G3DSA:3.20.20.450 392 646 7.3E-38 T 28-03-2018 IPR001633 EAL domain DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 SMART SM00267 214 387 8.1E-15 T 28-03-2018 IPR000160 GGDEF domain DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 SUPERFAMILY SSF55073 231 388 6.59E-17 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 Pfam PF00563 EAL domain 408 630 9.3E-37 T 28-03-2018 IPR001633 EAL domain DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 SMART SM00052 397 637 9.3E-26 T 28-03-2018 IPR001633 EAL domain DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 382 2.0E-18 T 28-03-2018 IPR000160 GGDEF domain DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 Gene3D G3DSA:3.30.70.270 218 391 1.7E-19 T 28-03-2018 DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 SUPERFAMILY SSF141868 405 641 9.02E-33 T 28-03-2018 IPR001633 EAL domain DDI_RS00125 35fad2ee5a14a9ec86c344ad68188596 648 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 129 2.0E-29 T 28-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 DDI_RS11775 c840f8c7e7605d0ae8fe356005532458 56 Pfam PF01783 Ribosomal L32p protein family 2 55 3.2E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS11775 c840f8c7e7605d0ae8fe356005532458 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.292 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS11775 c840f8c7e7605d0ae8fe356005532458 56 SUPERFAMILY SSF57829 2 54 7.94E-18 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DDI_RS11775 c840f8c7e7605d0ae8fe356005532458 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 2.4E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS16265 4bea8fc473e5d65902f5a66e5fdf4d36 126 Gene3D G3DSA:1.10.10.60 64 118 3.8E-17 T 28-03-2018 DDI_RS16265 4bea8fc473e5d65902f5a66e5fdf4d36 126 Pfam PF08765 Mor transcription activator family 10 118 1.4E-39 T 28-03-2018 IPR014875 Mor transcription activator DDI_RS16265 4bea8fc473e5d65902f5a66e5fdf4d36 126 SUPERFAMILY SSF46689 13 109 3.85E-25 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 Gene3D G3DSA:1.10.860.10 13 165 4.6E-47 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 Gene3D G3DSA:3.40.50.300 183 467 1.1E-64 T 28-03-2018 DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 22 460 3.1E-176 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 SUPERFAMILY SSF52540 200 271 2.54E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 SUPERFAMILY SSF52540 298 452 2.54E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 Pfam PF03796 DnaB-like helicase C terminal domain 202 458 4.3E-112 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 Pfam PF00772 DnaB-like helicase N terminal domain 23 124 2.0E-36 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 SUPERFAMILY SSF48024 21 132 1.7E-38 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DDI_RS16010 1db1cc5a2db072fd1112ba5520a79e8b 467 SMART SM00382 219 425 4.4E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 Gene3D G3DSA:1.10.1040.10 180 434 5.1E-112 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 173 6.4E-53 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 2.3E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.3E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 2.3E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 2.3E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 2.3E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 2.3E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 SUPERFAMILY SSF51735 4 175 4.62E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 Gene3D G3DSA:1.20.5.320 435 468 3.6E-21 T 28-03-2018 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 SMART SM01350 178 467 2.1E-221 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 SUPERFAMILY SSF48179 176 467 6.46E-131 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 Gene3D G3DSA:3.40.50.720 1 179 1.5E-35 T 28-03-2018 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 PIRSF PIRSF000109 1 468 2.0E-241 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 2.2E-230 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 28-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS05455 957915a2846a9cbd4df6b5ee8d3b2f5b 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 466 1.5E-133 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Gene3D G3DSA:3.40.228.10 755 839 5.9E-13 T 28-03-2018 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Gene3D G3DSA:2.20.25.90 37 108 2.2E-18 T 28-03-2018 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Pfam PF00384 Molybdopterin oxidoreductase 107 589 6.7E-34 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Pfam PF01568 Molydopterin dinucleotide binding domain 905 1008 9.7E-13 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 2 1014 0.0 T 28-03-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 SMART SM00926 43 104 3.0E-20 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Gene3D G3DSA:3.40.50.740 109 220 1.0E-18 T 28-03-2018 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 SUPERFAMILY SSF50692 886 1015 2.26E-38 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 SUPERFAMILY SSF50692 829 859 2.26E-38 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Gene3D G3DSA:2.40.40.20 840 1015 6.8E-36 T 28-03-2018 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Gene3D G3DSA:3.40.50.740 358 730 1.5E-49 T 28-03-2018 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Gene3D G3DSA:3.40.228.10 221 314 6.0E-20 T 28-03-2018 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 SUPERFAMILY SSF53706 35 850 4.71E-293 T 28-03-2018 DDI_RS06215 66348185663c48cfe72fa7ef663b2ca0 1015 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 2.6E-17 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS10705 0d4aa6958c7b20244d00bc9bade66883 302 Pfam PF04865 Baseplate J-like protein 118 261 3.3E-27 T 28-03-2018 IPR006949 Baseplate protein J-like DDI_RS10705 0d4aa6958c7b20244d00bc9bade66883 302 PIRSF PIRSF020481 1 302 5.5E-127 T 28-03-2018 IPR014507 Baseplate assembly protein J, predicted DDI_RS14590 6926e46a64e676c47535b7f04fde4857 287 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 1.1E-18 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DDI_RS14590 6926e46a64e676c47535b7f04fde4857 287 Gene3D G3DSA:2.30.140.10 1 54 1.3E-15 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DDI_RS14590 6926e46a64e676c47535b7f04fde4857 287 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.2E-116 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DDI_RS14590 6926e46a64e676c47535b7f04fde4857 287 Pfam PF01564 Spermine/spermidine synthase domain 60 240 3.8E-66 T 28-03-2018 DDI_RS14590 6926e46a64e676c47535b7f04fde4857 287 SUPERFAMILY SSF53335 6 283 9.39E-90 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS14590 6926e46a64e676c47535b7f04fde4857 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.135 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DDI_RS14590 6926e46a64e676c47535b7f04fde4857 287 Gene3D G3DSA:3.40.50.150 55 286 2.5E-44 T 28-03-2018 DDI_RS14590 6926e46a64e676c47535b7f04fde4857 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 28-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DDI_RS00860 d4248cf690b63fec7bcea1351e370ded 107 Gene3D G3DSA:1.10.260.40 46 105 1.2E-10 T 28-03-2018 DDI_RS00860 d4248cf690b63fec7bcea1351e370ded 107 SUPERFAMILY SSF47413 52 106 4.41E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS00860 d4248cf690b63fec7bcea1351e370ded 107 SMART SM00530 51 105 0.0018 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS00860 d4248cf690b63fec7bcea1351e370ded 107 Pfam PF01381 Helix-turn-helix 52 95 4.0E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS12640 b60436586b90126ab0906531af3224da 375 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 308 1.1E-26 T 28-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DDI_RS12640 b60436586b90126ab0906531af3224da 375 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 31 5.1E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DDI_RS12640 b60436586b90126ab0906531af3224da 375 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 2.6E-33 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PIRSF PIRSF000310 2 368 2.7E-133 T 28-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 DDI_RS12640 b60436586b90126ab0906531af3224da 375 SUPERFAMILY SSF56770 44 307 4.04E-84 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 1.0E-68 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 1.0E-68 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 1.0E-68 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 1.0E-68 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 1.0E-68 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 1.0E-68 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 1.0E-68 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 1.0E-68 T 28-03-2018 DDI_RS12640 b60436586b90126ab0906531af3224da 375 Gene3D G3DSA:4.10.480.10 232 309 3.6E-29 T 28-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DDI_RS12640 b60436586b90126ab0906531af3224da 375 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 7 365 4.4E-172 T 28-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 DDI_RS12640 b60436586b90126ab0906531af3224da 375 Gene3D G3DSA:3.40.50.700 42 231 1.3E-53 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS11190 e49f79bb3c18c13c6794b8744a77be8f 107 SUPERFAMILY SSF141488 30 106 1.09E-19 T 28-03-2018 IPR018660 C-type lysozyme inhibitor DDI_RS11190 e49f79bb3c18c13c6794b8744a77be8f 107 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 35 99 4.9E-15 T 28-03-2018 IPR018660 C-type lysozyme inhibitor DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 SMART SM01018 657 740 3.3E-45 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Gene3D G3DSA:1.10.1240.10 652 731 1.6E-37 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 4.1E-123 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Gene3D G3DSA:3.40.50.280 732 903 1.8E-54 T 28-03-2018 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 SUPERFAMILY SSF47644 652 739 3.4E-29 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 1.3E-81 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 TIGRFAM TIGR02082 metH: methionine synthase 13 1192 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Gene3D G3DSA:3.20.20.20 345 644 1.9E-75 T 28-03-2018 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 PIRSF PIRSF000381 1 1195 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Pfam PF00809 Pterin binding enzyme 360 598 7.7E-62 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 SUPERFAMILY SSF52242 742 894 1.57E-45 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 SUPERFAMILY SSF51717 356 630 7.59E-89 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Pfam PF02607 B12 binding domain 660 733 2.4E-26 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Pfam PF02310 B12 binding domain 748 841 5.3E-18 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Gene3D G3DSA:3.10.196.10 1081 1227 5.7E-63 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Gene3D G3DSA:3.10.196.10 956 1080 7.5E-44 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 Gene3D G3DSA:3.20.20.330 2 336 1.2E-113 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 SUPERFAMILY SSF82282 7 399 1.96E-118 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DDI_RS17840 1e8250b3cf5b24afe9785253d029aeb4 1227 SUPERFAMILY SSF56507 903 1226 6.02E-133 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDI_RS00430 71af2160acb511de18bb410cb9788bf6 470 SUPERFAMILY SSF56954 24 442 7.46E-95 T 28-03-2018 DDI_RS00430 71af2160acb511de18bb410cb9788bf6 470 Gene3D G3DSA:1.20.1600.10 13 431 1.5E-72 T 28-03-2018 DDI_RS00430 71af2160acb511de18bb410cb9788bf6 470 Pfam PF02321 Outer membrane efflux protein 234 424 2.5E-33 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS00430 71af2160acb511de18bb410cb9788bf6 470 Pfam PF02321 Outer membrane efflux protein 25 209 2.6E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS00430 71af2160acb511de18bb410cb9788bf6 470 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 438 4.0E-131 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 DDI_RS08880 9fa2352e8ca08ecf9e5cc31dee92ffe3 147 Gene3D G3DSA:2.60.120.10 37 143 1.2E-5 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS08880 9fa2352e8ca08ecf9e5cc31dee92ffe3 147 SUPERFAMILY SSF51215 74 134 8.11E-5 T 28-03-2018 DDI_RS18765 ff55bf9e32ab9663c89bca62a2a51cfc 111 SUPERFAMILY SSF54427 6 110 5.05E-23 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS18765 ff55bf9e32ab9663c89bca62a2a51cfc 111 Gene3D G3DSA:3.10.450.50 6 111 1.3E-13 T 28-03-2018 DDI_RS18765 ff55bf9e32ab9663c89bca62a2a51cfc 111 Pfam PF12680 SnoaL-like domain 7 104 1.1E-10 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain DDI_RS18765 ff55bf9e32ab9663c89bca62a2a51cfc 111 PIRSF PIRSF030561 1 110 3.0E-29 T 28-03-2018 IPR008317 Uncharacterised conserved protein UCP030561 DDI_RS03020 fb82c9d934eb34a80d7f4670dc4abed4 404 SUPERFAMILY SSF111369 53 241 3.92E-22 T 28-03-2018 DDI_RS03020 fb82c9d934eb34a80d7f4670dc4abed4 404 Gene3D G3DSA:2.40.50.100 61 125 3.1E-16 T 28-03-2018 DDI_RS03020 fb82c9d934eb34a80d7f4670dc4abed4 404 Gene3D G3DSA:1.10.287.470 126 179 4.2E-7 T 28-03-2018 DDI_RS03020 fb82c9d934eb34a80d7f4670dc4abed4 404 Gene3D G3DSA:2.40.50.100 180 389 1.0E-9 T 28-03-2018 DDI_RS03020 fb82c9d934eb34a80d7f4670dc4abed4 404 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 274 3.0E-38 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS03020 fb82c9d934eb34a80d7f4670dc4abed4 404 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 266 2.8E-17 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS14835 ba4f3914e428b052c948ae935c4d2a2e 170 SUPERFAMILY SSF55961 18 159 6.93E-23 T 28-03-2018 DDI_RS14835 ba4f3914e428b052c948ae935c4d2a2e 170 Gene3D G3DSA:3.30.530.20 17 165 2.6E-19 T 28-03-2018 IPR023393 START-like domain DDI_RS14835 ba4f3914e428b052c948ae935c4d2a2e 170 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 27 146 2.5E-12 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 DDI_RS02280 d0383e5249e2f29da9a16dd26dce5607 139 Pfam PF03603 DNA polymerase III psi subunit 3 129 1.4E-46 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS02280 d0383e5249e2f29da9a16dd26dce5607 139 PIRSF PIRSF029225 2 133 1.4E-47 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS02280 d0383e5249e2f29da9a16dd26dce5607 139 Gene3D G3DSA:3.40.50.10220 35 131 1.6E-31 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS02280 d0383e5249e2f29da9a16dd26dce5607 139 SUPERFAMILY SSF102220 27 137 4.18E-32 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS02280 d0383e5249e2f29da9a16dd26dce5607 139 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 127 5.0E-24 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS17235 e67b8ebab731c228acad23f53cd08a4c 143 Pfam PF03652 Holliday junction resolvase 5 136 1.5E-41 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DDI_RS17235 e67b8ebab731c228acad23f53cd08a4c 143 Gene3D G3DSA:3.30.420.140 2 142 8.1E-42 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DDI_RS17235 e67b8ebab731c228acad23f53cd08a4c 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 1.9E-56 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DDI_RS17235 e67b8ebab731c228acad23f53cd08a4c 143 SMART SM00732 4 104 1.9E-38 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DDI_RS17235 e67b8ebab731c228acad23f53cd08a4c 143 SUPERFAMILY SSF53098 5 137 1.31E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS17235 e67b8ebab731c228acad23f53cd08a4c 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 25.748 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 SMART SM00354 1 68 4.4E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 28-03-2018 DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 3.1E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 SUPERFAMILY SSF47413 1 56 5.36E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 Gene3D G3DSA:1.10.260.40 1 51 1.7E-21 T 28-03-2018 DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 SUPERFAMILY SSF53822 57 328 2.52E-94 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 Gene3D G3DSA:3.40.50.2300 52 172 1.3E-32 T 28-03-2018 DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 Gene3D G3DSA:3.40.50.2300 173 331 1.2E-51 T 28-03-2018 DDI_RS19900 8e6d9db4af8ab59ac3cbd5128e254531 331 Pfam PF13377 Periplasmic binding protein-like domain 166 327 9.6E-45 T 28-03-2018 DDI_RS07535 6ab197ee8360097d543addf024663f32 98 Gene3D G3DSA:3.30.70.1060 2 93 7.2E-11 T 28-03-2018 DDI_RS07535 6ab197ee8360097d543addf024663f32 98 Pfam PF03795 YCII-related domain 21 89 1.8E-6 T 28-03-2018 IPR005545 YCII-related DDI_RS07535 6ab197ee8360097d543addf024663f32 98 SUPERFAMILY SSF54909 23 91 3.75E-12 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS13535 30a609aeaf2444a67632feb23ee018ac 142 PRINTS PR01438 Universal stress protein signature 2 20 7.6E-14 T 28-03-2018 IPR006015 Universal stress protein A DDI_RS13535 30a609aeaf2444a67632feb23ee018ac 142 PRINTS PR01438 Universal stress protein signature 103 115 7.6E-14 T 28-03-2018 IPR006015 Universal stress protein A DDI_RS13535 30a609aeaf2444a67632feb23ee018ac 142 PRINTS PR01438 Universal stress protein signature 120 142 7.6E-14 T 28-03-2018 IPR006015 Universal stress protein A DDI_RS13535 30a609aeaf2444a67632feb23ee018ac 142 PIRSF PIRSF006276 1 142 1.5E-19 T 28-03-2018 IPR006015 Universal stress protein A DDI_RS13535 30a609aeaf2444a67632feb23ee018ac 142 Pfam PF00582 Universal stress protein family 1 142 1.6E-28 T 28-03-2018 IPR006016 UspA GO:0006950 DDI_RS13535 30a609aeaf2444a67632feb23ee018ac 142 SUPERFAMILY SSF52402 2 142 2.68E-30 T 28-03-2018 DDI_RS13535 30a609aeaf2444a67632feb23ee018ac 142 Gene3D G3DSA:3.40.50.620 1 142 2.3E-30 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS05420 6dc285d641e297c185357df05924a845 302 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 13 292 2.4E-76 T 28-03-2018 IPR006446 Rhamnosyltransferase DDI_RS05420 6dc285d641e297c185357df05924a845 302 Pfam PF00535 Glycosyl transferase family 2 10 178 7.9E-10 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS05420 6dc285d641e297c185357df05924a845 302 SUPERFAMILY SSF53448 7 273 3.28E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05420 6dc285d641e297c185357df05924a845 302 Gene3D G3DSA:3.90.550.10 8 246 1.7E-19 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 8.3E-7 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.483 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 5.5E-204 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 Pfam PF00270 DEAD/DEAH box helicase 203 363 3.1E-13 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 SUPERFAMILY SSF52540 220 440 8.18E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 SUPERFAMILY SSF52540 503 601 8.18E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 SMART SM00487 195 389 8.6E-14 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 Gene3D G3DSA:3.40.50.300 196 361 3.0E-26 T 28-03-2018 DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 Gene3D G3DSA:3.40.50.300 400 622 2.4E-22 T 28-03-2018 DDI_RS19080 a4829fe1b518f52bec34e938c5614d5c 732 SMART SM00490 492 589 8.3E-10 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS20645 f5246c7ee25a4391b8e89270c01c4023 331 Gene3D G3DSA:3.40.50.2300 26 130 2.0E-21 T 28-03-2018 DDI_RS20645 f5246c7ee25a4391b8e89270c01c4023 331 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 4.9E-162 T 28-03-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 DDI_RS20645 f5246c7ee25a4391b8e89270c01c4023 331 Pfam PF13407 Periplasmic binding protein domain 38 286 1.0E-62 T 28-03-2018 IPR025997 Periplasmic binding protein DDI_RS20645 f5246c7ee25a4391b8e89270c01c4023 331 SUPERFAMILY SSF53822 24 317 3.26E-72 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS20645 f5246c7ee25a4391b8e89270c01c4023 331 Gene3D G3DSA:3.40.50.2300 131 329 5.0E-36 T 28-03-2018 DDI_RS03475 11167ba4f74ed353a6da57dc51b632d6 73 SUPERFAMILY SSF47413 3 69 3.21E-30 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS03475 11167ba4f74ed353a6da57dc51b632d6 73 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 71 8.4E-36 T 28-03-2018 DDI_RS03475 11167ba4f74ed353a6da57dc51b632d6 73 Gene3D G3DSA:1.10.260.40 1 71 6.5E-17 T 28-03-2018 DDI_RS02815 b2498ec777ecee8351408c098067bec5 381 Gene3D G3DSA:1.10.8.350 70 149 1.4E-7 T 28-03-2018 DDI_RS02815 b2498ec777ecee8351408c098067bec5 381 Gene3D G3DSA:1.10.8.350 150 254 6.5E-37 T 28-03-2018 DDI_RS02815 b2498ec777ecee8351408c098067bec5 381 Pfam PF13406 Transglycosylase SLT domain 75 371 1.4E-89 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 DDI_RS02815 b2498ec777ecee8351408c098067bec5 381 Gene3D G3DSA:1.10.530.10 260 380 5.9E-30 T 28-03-2018 DDI_RS02815 b2498ec777ecee8351408c098067bec5 381 SUPERFAMILY SSF53955 66 375 5.51E-91 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS02815 b2498ec777ecee8351408c098067bec5 381 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 80 374 8.4E-115 T 28-03-2018 IPR011757 Lytic transglycosylase MltB DDI_RS19640 3e859b82c5fdf2315a8039c3b2583fe5 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS19640 3e859b82c5fdf2315a8039c3b2583fe5 367 SUPERFAMILY SSF52540 4 240 2.21E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19640 3e859b82c5fdf2315a8039c3b2583fe5 367 SUPERFAMILY SSF50331 236 348 3.4E-15 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS19640 3e859b82c5fdf2315a8039c3b2583fe5 367 Pfam PF08402 TOBE domain 270 341 1.7E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS19640 3e859b82c5fdf2315a8039c3b2583fe5 367 Pfam PF00005 ABC transporter 19 161 3.2E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19640 3e859b82c5fdf2315a8039c3b2583fe5 367 SMART SM00382 28 211 2.9E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19640 3e859b82c5fdf2315a8039c3b2583fe5 367 Gene3D G3DSA:2.40.50.140 273 334 6.6E-7 T 28-03-2018 DDI_RS19640 3e859b82c5fdf2315a8039c3b2583fe5 367 Gene3D G3DSA:3.40.50.300 1 236 4.8E-71 T 28-03-2018 DDI_RS02965 9489fb7bd1844bded72e15e2f5c3fc50 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 146 5.5E-50 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 DDI_RS02965 9489fb7bd1844bded72e15e2f5c3fc50 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 148 32.065 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 DDI_RS06060 b178ea7f86eac04fd20a9d964ac792b7 310 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 295 1.3E-49 T 28-03-2018 DDI_RS06060 b178ea7f86eac04fd20a9d964ac792b7 310 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 268 9.9E-80 T 28-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DDI_RS06060 b178ea7f86eac04fd20a9d964ac792b7 310 Gene3D G3DSA:3.40.190.10 140 299 1.2E-26 T 28-03-2018 DDI_RS06060 b178ea7f86eac04fd20a9d964ac792b7 310 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 306 2.2E-93 T 28-03-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 DDI_RS06060 b178ea7f86eac04fd20a9d964ac792b7 310 Gene3D G3DSA:3.40.190.10 49 139 3.4E-4 T 28-03-2018 DDI_RS06060 b178ea7f86eac04fd20a9d964ac792b7 310 SUPERFAMILY SSF53850 45 297 4.01E-45 T 28-03-2018 DDI_RS00870 f6705766b5e2c9d21320093f1746a295 209 Pfam PF14103 Domain of unknown function (DUF4276) 7 137 2.2E-7 T 28-03-2018 IPR025455 Protein of unknown function DUF4276 DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 Pfam PF11741 AMIN domain 28 116 3.3E-11 T 28-03-2018 IPR021731 AMIN domain DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 Gene3D G3DSA:3.10.350.10 505 557 9.1E-14 T 28-03-2018 DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 Gene3D G3DSA:3.10.350.10 428 496 1.8E-13 T 28-03-2018 DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 174 393 9.4E-48 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 SUPERFAMILY SSF54106 511 555 9.29E-11 T 28-03-2018 IPR018392 LysM domain DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 Gene3D G3DSA:3.40.630.40 169 400 5.2E-57 T 28-03-2018 DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 SUPERFAMILY SSF53187 320 397 9.42E-53 T 28-03-2018 DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 SUPERFAMILY SSF53187 172 268 9.42E-53 T 28-03-2018 DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 SMART SM00257 435 478 1.6E-13 T 28-03-2018 IPR018392 LysM domain DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 SMART SM00257 512 555 2.9E-16 T 28-03-2018 IPR018392 LysM domain DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 SUPERFAMILY SSF54106 434 478 1.83E-10 T 28-03-2018 IPR018392 LysM domain DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 Pfam PF01476 LysM domain 436 478 3.8E-13 T 28-03-2018 IPR018392 LysM domain DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 Pfam PF01476 LysM domain 513 555 8.6E-14 T 28-03-2018 IPR018392 LysM domain DDI_RS17290 b58ce170185f365f9ddd3b1cfffb07f8 557 SMART SM00646 234 393 4.4E-74 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DDI_RS17295 5da111543f2bc5eea2f132c8808933d8 160 SUPERFAMILY SSF52540 29 129 1.09E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17295 5da111543f2bc5eea2f132c8808933d8 160 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 3.5E-51 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DDI_RS17295 5da111543f2bc5eea2f132c8808933d8 160 Gene3D G3DSA:3.40.50.300 1 153 5.8E-50 T 28-03-2018 DDI_RS17295 5da111543f2bc5eea2f132c8808933d8 160 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 129 1.3E-39 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 Gene3D G3DSA:1.10.10.60 383 440 2.2E-8 T 28-03-2018 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 SUPERFAMILY SSF46689 350 438 6.27E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 SMART SM00448 7 118 1.4E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 Gene3D G3DSA:3.40.50.300 138 309 1.6E-26 T 28-03-2018 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 SMART SM00382 157 300 1.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 Gene3D G3DSA:1.10.8.60 310 382 1.1E-21 T 28-03-2018 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 Pfam PF00158 Sigma-54 interaction domain 138 303 1.4E-71 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 SUPERFAMILY SSF52172 6 181 9.96E-43 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 Pfam PF00072 Response regulator receiver domain 10 118 2.8E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 Gene3D G3DSA:3.40.50.2300 1 137 8.5E-34 T 28-03-2018 DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 SUPERFAMILY SSF52540 137 380 1.33E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14185 8178a1d94ab652986171f047c14927d0 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS11220 6c3c0e1d20956bd9ce9db4eb90bc50cc 228 Gene3D G3DSA:3.30.420.10 9 214 3.5E-31 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS11220 6c3c0e1d20956bd9ce9db4eb90bc50cc 228 Hamap MF_00157 Ribonuclease T [rnt]. 1 228 117.466 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 DDI_RS11220 6c3c0e1d20956bd9ce9db4eb90bc50cc 228 SMART SM00479 18 203 4.2E-38 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDI_RS11220 6c3c0e1d20956bd9ce9db4eb90bc50cc 228 SUPERFAMILY SSF53098 8 207 9.4E-58 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS11220 6c3c0e1d20956bd9ce9db4eb90bc50cc 228 Pfam PF00929 Exonuclease 20 194 7.0E-38 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDI_RS11220 6c3c0e1d20956bd9ce9db4eb90bc50cc 228 TIGRFAM TIGR01298 RNaseT: ribonuclease T 11 208 1.1E-106 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 DDI_RS17550 e0609066f212eeebbb113d12c936d6db 382 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS17550 e0609066f212eeebbb113d12c936d6db 382 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 190 203 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDI_RS17550 e0609066f212eeebbb113d12c936d6db 382 SUPERFAMILY SSF51569 2 278 9.89E-75 T 28-03-2018 DDI_RS17550 e0609066f212eeebbb113d12c936d6db 382 Gene3D G3DSA:3.20.20.70 1 319 6.4E-88 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS17550 e0609066f212eeebbb113d12c936d6db 382 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 4 367 2.6E-159 T 28-03-2018 IPR013477 Homocitrate synthase NifV-type GO:0004410|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 DDI_RS17550 e0609066f212eeebbb113d12c936d6db 382 Pfam PF00682 HMGL-like 4 258 2.1E-72 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DDI_RS02790 30c82594cdd061bad1b879939d3d9b5b 377 Gene3D G3DSA:3.30.360.10 142 374 1.4E-47 T 28-03-2018 DDI_RS02790 30c82594cdd061bad1b879939d3d9b5b 377 SUPERFAMILY SSF51735 3 158 2.17E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02790 30c82594cdd061bad1b879939d3d9b5b 377 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 258 4.0E-7 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 DDI_RS02790 30c82594cdd061bad1b879939d3d9b5b 377 Gene3D G3DSA:3.40.50.720 1 141 2.4E-40 T 28-03-2018 DDI_RS02790 30c82594cdd061bad1b879939d3d9b5b 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 1.2E-23 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDI_RS02790 30c82594cdd061bad1b879939d3d9b5b 377 SUPERFAMILY SSF55347 135 319 4.25E-37 T 28-03-2018 DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 Gene3D G3DSA:3.30.1340.10 1 85 7.4E-32 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 SUPERFAMILY SSF55594 1 82 2.49E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.5E-28 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 8.9E-31 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS03055 25452b5d91698cd0a505cafd5a7758da 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 SUPERFAMILY SSF58104 328 609 3.01E-75 T 28-03-2018 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 7.1E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 459 486 7.1E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 488 517 7.1E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 7.1E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 Gene3D G3DSA:1.10.287.950 416 612 1.7E-49 T 28-03-2018 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 Gene3D G3DSA:1.10.287.950 40 415 3.6E-16 T 28-03-2018 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 SMART SM01358 36 286 4.3E-46 T 28-03-2018 IPR032255 Helical bimodular sensor domain DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 419 574 1.8E-55 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 SMART SM00283 361 608 4.5E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 SMART SM00304 308 360 1.3E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS10645 d7bf35a6005da806994c9770af9ac980 665 Pfam PF16591 Helical bimodular sensor domain 40 279 3.1E-8 T 28-03-2018 IPR032255 Helical bimodular sensor domain DDI_RS14535 9c3c85547f74f74d81b2120d28545611 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 280 1.1E-106 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DDI_RS14535 9c3c85547f74f74d81b2120d28545611 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 4.7E-7 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS14535 9c3c85547f74f74d81b2120d28545611 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.277 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DDI_RS14535 9c3c85547f74f74d81b2120d28545611 284 Gene3D G3DSA:3.40.50.620 1 176 1.0E-75 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS14535 9c3c85547f74f74d81b2120d28545611 284 SUPERFAMILY SSF52374 3 281 3.56E-104 T 28-03-2018 DDI_RS14535 9c3c85547f74f74d81b2120d28545611 284 Gene3D G3DSA:3.30.1300.10 177 284 4.3E-28 T 28-03-2018 DDI_RS14535 9c3c85547f74f74d81b2120d28545611 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.5E-99 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DDI_RS11030 78332980df6f130e7f478846de0605bf 351 Pfam PF05128 Domain of unknown function (DUF697) 184 340 1.4E-52 T 28-03-2018 IPR021147 Protein of unknown function DUF697 DDI_RS11030 78332980df6f130e7f478846de0605bf 351 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 341 8.4E-125 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 DDI_RS11030 78332980df6f130e7f478846de0605bf 351 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 36.347 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 DDI_RS20980 1e85ec6677343f49dca1d2617082eba2 233 SMART SM00382 38 226 2.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20980 1e85ec6677343f49dca1d2617082eba2 233 Pfam PF00005 ABC transporter 29 177 4.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20980 1e85ec6677343f49dca1d2617082eba2 233 SUPERFAMILY SSF52540 9 229 3.55E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20980 1e85ec6677343f49dca1d2617082eba2 233 Gene3D G3DSA:3.40.50.300 5 231 3.7E-61 T 28-03-2018 DDI_RS20980 1e85ec6677343f49dca1d2617082eba2 233 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 SUPERFAMILY SSF54211 191 330 3.03E-37 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 Gene3D G3DSA:3.30.565.10 1 216 3.1E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 2.0E-102 T 28-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 639 25.838 T 28-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 28-03-2018 IPR014762 DNA mismatch repair, conserved site DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 329 4.7E-39 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 SMART SM00853 463 600 6.2E-19 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 1.5E-11 T 28-03-2018 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 Gene3D G3DSA:3.30.230.10 217 329 3.7E-31 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 SMART SM01340 212 330 3.0E-57 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 SUPERFAMILY SSF118116 459 641 6.67E-41 T 28-03-2018 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 Pfam PF08676 MutL C terminal dimerisation domain 460 591 3.4E-29 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DDI_RS17285 a6eb3e6e4e7238bc18bd7b9180235521 642 SUPERFAMILY SSF55874 1 203 2.23E-55 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 498 7.7E-38 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 SMART SM00283 285 532 2.2E-46 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 Gene3D G3DSA:1.20.120.30 53 185 3.2E-22 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 SMART SM00304 230 284 3.5E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 2.2E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 75 90 2.2E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 2.2E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 20 45 2.2E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 205 225 2.2E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 306 335 2.2E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 460 489 2.2E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 SUPERFAMILY SSF47170 58 194 3.27E-34 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 Pfam PF02203 Tar ligand binding domain homologue 19 189 3.1E-31 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 SMART SM00319 59 196 0.0012 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 Gene3D G3DSA:1.10.287.950 331 536 5.0E-40 T 28-03-2018 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 Gene3D G3DSA:1.10.287.950 186 330 0.0059 T 28-03-2018 DDI_RS09065 a3ed469cee651bb72595ec6c53dd2f4d 566 SUPERFAMILY SSF58104 264 533 3.31E-53 T 28-03-2018 DDI_RS16135 ed8d8a3ae14b0483b0418c0d8de0874d 311 Gene3D G3DSA:3.90.1690.10 2 311 6.8E-54 T 28-03-2018 DDI_RS02570 f00409932619e149ffe0065284faa71f 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 5.0E-23 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 DDI_RS02570 f00409932619e149ffe0065284faa71f 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 75 140 1.7E-18 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 DDI_RS02570 f00409932619e149ffe0065284faa71f 142 Gene3D G3DSA:2.40.50.100 64 132 2.4E-20 T 28-03-2018 DDI_RS02570 f00409932619e149ffe0065284faa71f 142 Gene3D G3DSA:2.40.50.100 1 63 2.0E-19 T 28-03-2018 DDI_RS02570 f00409932619e149ffe0065284faa71f 142 SUPERFAMILY SSF50331 1 68 4.62E-20 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS02570 f00409932619e149ffe0065284faa71f 142 SUPERFAMILY SSF50331 73 140 6.07E-20 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS02570 f00409932619e149ffe0065284faa71f 142 Pfam PF03459 TOBE domain 4 66 2.2E-15 T 28-03-2018 IPR005116 Transport-associated OB, type 1 DDI_RS02570 f00409932619e149ffe0065284faa71f 142 Pfam PF03459 TOBE domain 76 138 5.0E-17 T 28-03-2018 IPR005116 Transport-associated OB, type 1 DDI_RS04775 104efdfe3cf6a12d5dd8e519dcfaf4a8 127 SUPERFAMILY SSF52833 3 116 2.69E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS04775 104efdfe3cf6a12d5dd8e519dcfaf4a8 127 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 115 5.1E-35 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR DDI_RS04775 104efdfe3cf6a12d5dd8e519dcfaf4a8 127 Gene3D G3DSA:3.40.30.10 1 116 1.1E-36 T 28-03-2018 DDI_RS04775 104efdfe3cf6a12d5dd8e519dcfaf4a8 127 Pfam PF03960 ArsC family 6 115 1.3E-15 T 28-03-2018 IPR006660 Arsenate reductase-like DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 4.2E-43 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.708 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 SUPERFAMILY SSF51735 2 150 6.0E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 4.3E-46 T 28-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.2E-36 T 28-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 SUPERFAMILY SSF69055 301 395 2.22E-32 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 PIRSF PIRSF006205 1 397 7.7E-157 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 Gene3D G3DSA:1.10.1740.10 312 396 1.1E-30 T 28-03-2018 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 Gene3D G3DSA:3.40.50.720 1 150 7.9E-51 T 28-03-2018 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 SUPERFAMILY SSF55347 126 274 1.28E-62 T 28-03-2018 DDI_RS03745 fa4d63cf4e368693d8dca4335466a170 397 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 393 1.7E-175 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 DDI_RS11590 56a1f004b171cc8277b349907c9f324b 257 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS11590 56a1f004b171cc8277b349907c9f324b 257 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 6 255 45.795 T 28-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 DDI_RS11590 56a1f004b171cc8277b349907c9f324b 257 Pfam PF00005 ABC transporter 19 168 3.9E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS11590 56a1f004b171cc8277b349907c9f324b 257 SUPERFAMILY SSF52540 18 233 1.57E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11590 56a1f004b171cc8277b349907c9f324b 257 SMART SM00382 27 217 5.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11590 56a1f004b171cc8277b349907c9f324b 257 Gene3D G3DSA:3.40.50.300 16 234 1.2E-45 T 28-03-2018 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 Gene3D G3DSA:3.10.290.10 2 76 8.2E-21 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 Pfam PF01479 S4 domain 18 63 1.6E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 SMART SM00363 18 76 8.8E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 312 1.6E-106 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 Gene3D G3DSA:3.30.2350.10 83 316 6.0E-69 T 28-03-2018 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 SUPERFAMILY SSF55120 77 320 5.55E-79 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 3.5E-31 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS14705 f1d50e3ea20a56baf543fad172234b4c 325 SUPERFAMILY SSF55174 17 69 5.55E-10 T 28-03-2018 DDI_RS06010 7e05c0c8f7a337abeaf37fa027125e02 191 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 186 4.4E-51 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 DDI_RS06010 7e05c0c8f7a337abeaf37fa027125e02 191 PIRSF PIRSF020680 1 191 1.0E-56 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 DDI_RS06010 7e05c0c8f7a337abeaf37fa027125e02 191 SUPERFAMILY SSF159709 13 190 9.68E-55 T 28-03-2018 DDI_RS06010 7e05c0c8f7a337abeaf37fa027125e02 191 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 189 2.1E-60 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 DDI_RS00145 28056fa252b607e9a167ac1df30eea91 197 Pfam PF02545 Maf-like protein 4 184 9.8E-56 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 DDI_RS00145 28056fa252b607e9a167ac1df30eea91 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 181 2.4E-61 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 DDI_RS00145 28056fa252b607e9a167ac1df30eea91 197 Gene3D G3DSA:3.90.950.10 1 189 7.1E-68 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDI_RS00145 28056fa252b607e9a167ac1df30eea91 197 PIRSF PIRSF006305 1 191 2.2E-51 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 DDI_RS00145 28056fa252b607e9a167ac1df30eea91 197 SUPERFAMILY SSF52972 2 183 2.81E-59 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDI_RS00145 28056fa252b607e9a167ac1df30eea91 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.7 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 DDI_RS13095 d722e73421a75a62636505202c49aaf6 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 6.4E-44 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DDI_RS13095 d722e73421a75a62636505202c49aaf6 138 Pfam PF03061 Thioesterase superfamily 50 127 6.0E-16 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDI_RS13095 d722e73421a75a62636505202c49aaf6 138 Gene3D G3DSA:3.10.129.10 1 138 4.4E-28 T 28-03-2018 DDI_RS13095 d722e73421a75a62636505202c49aaf6 138 SUPERFAMILY SSF54637 3 133 1.07E-28 T 28-03-2018 IPR029069 HotDog domain DDI_RS21500 5f01f076dda29f7041aac6a7bce7beb6 66 SUPERFAMILY SSF54285 1 66 1.6E-16 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DDI_RS21500 5f01f076dda29f7041aac6a7bce7beb6 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 4.1E-17 T 28-03-2018 IPR010035 ThiS, thiamine-biosynthesis DDI_RS21500 5f01f076dda29f7041aac6a7bce7beb6 66 Pfam PF02597 ThiS family 5 66 2.2E-13 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 DDI_RS21500 5f01f076dda29f7041aac6a7bce7beb6 66 Gene3D G3DSA:3.10.20.30 1 66 9.8E-21 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS10550 26d0271848b09e8d71d9f2152dcc6ca0 186 ProSitePatterns PS00893 Nudix box signature. 90 111 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDI_RS10550 26d0271848b09e8d71d9f2152dcc6ca0 186 Pfam PF00293 NUDIX domain 56 165 4.7E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS10550 26d0271848b09e8d71d9f2152dcc6ca0 186 Gene3D G3DSA:3.90.79.10 51 186 4.9E-21 T 28-03-2018 DDI_RS10550 26d0271848b09e8d71d9f2152dcc6ca0 186 SUPERFAMILY SSF55811 56 183 4.87E-24 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 227 246 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 197 216 2.2E-44 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 SUPERFAMILY SSF118215 6 405 4.58E-112 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 Gene3D G3DSA:1.10.3860.10 1 412 7.7E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05825 790e3bf1f0f2f9771d496663c6812ab8 429 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 2.2E-107 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05410 d60bec9b6e9e845fd848631740dfd06f 288 Gene3D G3DSA:3.90.550.10 11 275 1.0E-7 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05410 d60bec9b6e9e845fd848631740dfd06f 288 SUPERFAMILY SSF53448 9 276 4.05E-12 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS00650 5d16c19bddca47d3955d09d19f161e7e 272 Gene3D G3DSA:3.90.260.10 137 231 2.0E-4 T 28-03-2018 IPR002931 Transglutaminase-like DDI_RS00650 5d16c19bddca47d3955d09d19f161e7e 272 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 1.6E-21 T 28-03-2018 IPR013589 Bacterial transglutaminase-like, N-terminal DDI_RS00650 5d16c19bddca47d3955d09d19f161e7e 272 SUPERFAMILY SSF54001 50 251 1.04E-37 T 28-03-2018 DDI_RS00650 5d16c19bddca47d3955d09d19f161e7e 272 Pfam PF01841 Transglutaminase-like superfamily 114 215 8.2E-23 T 28-03-2018 IPR002931 Transglutaminase-like DDI_RS00650 5d16c19bddca47d3955d09d19f161e7e 272 SMART SM00460 156 218 2.0E-14 T 28-03-2018 IPR002931 Transglutaminase-like DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 SUPERFAMILY SSF103473 14 410 1.31E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 290 304 - T 28-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 Pfam PF01306 LacY proton/sugar symporter 14 415 4.5E-194 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 PRINTS PR00174 LacY proton/sugar symporter family signature 270 291 4.2E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 PRINTS PR00174 LacY proton/sugar symporter family signature 224 252 4.2E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 PRINTS PR00174 LacY proton/sugar symporter family signature 294 320 4.2E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 PRINTS PR00174 LacY proton/sugar symporter family signature 78 107 4.2E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 PRINTS PR00174 LacY proton/sugar symporter family signature 113 135 4.2E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 PRINTS PR00174 LacY proton/sugar symporter family signature 325 344 4.2E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 PRINTS PR00174 LacY proton/sugar symporter family signature 356 376 4.2E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 PRINTS PR00174 LacY proton/sugar symporter family signature 155 173 4.2E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 Gene3D G3DSA:1.20.1250.20 4 208 4.9E-23 T 28-03-2018 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 16 411 4.2E-197 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 DDI_RS06245 acdcf7dcc8f0f05890c0815372e08f9c 426 Gene3D G3DSA:1.20.1250.20 216 420 1.9E-21 T 28-03-2018 DDI_RS19325 6fe31c9cb7fcf35d0aa526394c6fdcbd 394 Gene3D G3DSA:3.40.640.10 56 273 4.5E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS19325 6fe31c9cb7fcf35d0aa526394c6fdcbd 394 SUPERFAMILY SSF53383 5 394 1.24E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS19325 6fe31c9cb7fcf35d0aa526394c6fdcbd 394 Gene3D G3DSA:3.90.1150.10 274 394 5.6E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS19325 6fe31c9cb7fcf35d0aa526394c6fdcbd 394 Pfam PF00155 Aminotransferase class I and II 49 390 2.0E-38 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 Gene3D G3DSA:1.10.287.950 212 318 9.5E-12 T 28-03-2018 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 Pfam PF02203 Tar ligand binding domain homologue 4 164 9.5E-13 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 SUPERFAMILY SSF58104 236 515 6.15E-72 T 28-03-2018 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 Gene3D G3DSA:1.20.120.30 38 176 4.2E-20 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 SUPERFAMILY SSF47170 38 151 4.45E-6 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 Gene3D G3DSA:1.10.287.950 320 518 1.9E-47 T 28-03-2018 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 482 1.0E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.2E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 1.2E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 1.2E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.2E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 1.2E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 SMART SM00283 267 514 1.6E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07860 ed3df00f29c8af2dc4ffe30a3a1cca04 557 SMART SM00304 214 266 0.0061 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 121 4.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 152 4.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 60 71 4.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 PIRSF PIRSF000126 2 241 1.4E-59 T 28-03-2018 DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 171 1.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 152 1.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 60 71 1.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 107 123 1.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 SUPERFAMILY SSF51735 2 203 1.76E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 Pfam PF00106 short chain dehydrogenase 2 173 3.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS12420 a048cf489257961530cd531fd5bc6ac7 241 Gene3D G3DSA:3.40.50.720 1 241 1.0E-45 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 Gene3D G3DSA:3.30.2090.10 181 269 2.5E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 Gene3D G3DSA:3.30.2090.10 701 788 1.4E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 Gene3D G3DSA:1.20.1640.10 801 1022 3.0E-33 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 Gene3D G3DSA:1.20.1640.10 280 502 2.3E-47 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 Gene3D G3DSA:3.30.70.1430 557 652 8.6E-13 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82714 183 266 2.09E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82714 704 785 4.45E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82866 811 1008 1.83E-40 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82693 136 182 8.89E-23 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82693 268 324 8.89E-23 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82866 290 491 1.44E-47 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 Gene3D G3DSA:3.30.70.1430 40 142 1.4E-24 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82693 555 650 5.23E-15 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.739 T 28-03-2018 IPR023931 Multidrug resistance protein MdtC DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82693 788 832 1.38E-5 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82693 659 701 1.38E-5 T 28-03-2018 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.4E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS13640 8cfd97b8aea579dff05bd10a5f3e1d3c 1029 SUPERFAMILY SSF82693 40 135 7.32E-23 T 28-03-2018 DDI_RS06625 58adc239828fd03b1fecbe372c2be125 258 Pfam PF09850 Type VI secretion system protein DotU 39 240 6.8E-65 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU DDI_RS06625 58adc239828fd03b1fecbe372c2be125 258 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 38 247 2.4E-71 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU DDI_RS05055 41a1fba6deddbf18e6caef14e9bb30a5 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 64 1.5E-35 T 28-03-2018 IPR019663 Uncharacterised protein YbfA DDI_RS15560 69b46dafa41bd39299c557f5e73ff8a0 524 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 120 521 2.4E-143 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 DDI_RS15560 69b46dafa41bd39299c557f5e73ff8a0 524 Pfam PF08666 SAF domain 23 92 1.3E-10 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DDI_RS15560 69b46dafa41bd39299c557f5e73ff8a0 524 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 3 524 84.145 T 28-03-2018 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 DDI_RS15560 69b46dafa41bd39299c557f5e73ff8a0 524 SMART SM00858 23 93 8.1E-12 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DDI_RS15560 69b46dafa41bd39299c557f5e73ff8a0 524 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 524 2.9E-285 T 28-03-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 DDI_RS10975 1bde7d38a23054ba886f827e364481f6 243 Gene3D G3DSA:3.40.630.10 38 242 3.0E-23 T 28-03-2018 DDI_RS10975 1bde7d38a23054ba886f827e364481f6 243 Pfam PF00246 Zinc carboxypeptidase 42 162 4.1E-11 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DDI_RS10975 1bde7d38a23054ba886f827e364481f6 243 SUPERFAMILY SSF53187 138 219 5.29E-31 T 28-03-2018 DDI_RS10975 1bde7d38a23054ba886f827e364481f6 243 SUPERFAMILY SSF53187 24 111 5.29E-31 T 28-03-2018 DDI_RS09205 1cdba0de2529c26d759b87f61fc3a453 210 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 3 195 26.596 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DDI_RS09205 1cdba0de2529c26d759b87f61fc3a453 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 11 194 3.9E-64 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DDI_RS09205 1cdba0de2529c26d759b87f61fc3a453 210 PIRSF PIRSF006091 1 204 1.6E-69 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DDI_RS09205 1cdba0de2529c26d759b87f61fc3a453 210 SMART SM00900 101 193 1.1E-34 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDI_RS09205 1cdba0de2529c26d759b87f61fc3a453 210 Pfam PF04205 FMN-binding domain 101 188 1.8E-17 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDI_RS14555 12151e5a89a9b297addbf9cf78e28ab9 213 SMART SM00947 30 192 4.7E-68 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDI_RS14555 12151e5a89a9b297addbf9cf78e28ab9 213 SUPERFAMILY SSF53056 1 210 3.92E-76 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDI_RS14555 12151e5a89a9b297addbf9cf78e28ab9 213 Gene3D G3DSA:3.40.1050.10 1 213 5.0E-75 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDI_RS14555 12151e5a89a9b297addbf9cf78e28ab9 213 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDI_RS14555 12151e5a89a9b297addbf9cf78e28ab9 213 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDI_RS14555 12151e5a89a9b297addbf9cf78e28ab9 213 Pfam PF00484 Carbonic anhydrase 38 188 9.7E-51 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDI_RS18330 b02cb4817ad74e5e931792c061ae7a34 375 SMART SM00656 49 285 1.7E-102 T 28-03-2018 IPR002022 Pectate lyase DDI_RS18330 b02cb4817ad74e5e931792c061ae7a34 375 SUPERFAMILY SSF51126 24 369 2.2E-82 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS18330 b02cb4817ad74e5e931792c061ae7a34 375 Pfam PF00544 Pectate lyase 72 279 3.8E-86 T 28-03-2018 IPR002022 Pectate lyase DDI_RS18330 b02cb4817ad74e5e931792c061ae7a34 375 Gene3D G3DSA:2.160.20.10 22 368 1.1E-50 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS00895 64e028bdf659120840a476d96964b892 159 Gene3D G3DSA:3.40.630.30 21 155 5.0E-17 T 28-03-2018 DDI_RS00895 64e028bdf659120840a476d96964b892 159 Pfam PF13673 Acetyltransferase (GNAT) domain 29 147 2.7E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS00895 64e028bdf659120840a476d96964b892 159 SUPERFAMILY SSF55729 22 150 8.43E-14 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS06370 cccd93bf4370b0c5f740e7180b7f1b75 263 Pfam PF00005 ABC transporter 19 167 5.5E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06370 cccd93bf4370b0c5f740e7180b7f1b75 263 Gene3D G3DSA:3.40.50.300 1 252 2.3E-74 T 28-03-2018 DDI_RS06370 cccd93bf4370b0c5f740e7180b7f1b75 263 SMART SM00382 28 242 9.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06370 cccd93bf4370b0c5f740e7180b7f1b75 263 SUPERFAMILY SSF52540 1 236 4.52E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06370 cccd93bf4370b0c5f740e7180b7f1b75 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS21220 c157be284aa9e43c087743bfa9725762 260 SUPERFAMILY SSF52799 12 259 8.95E-53 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like DDI_RS21220 c157be284aa9e43c087743bfa9725762 260 Pfam PF13350 Tyrosine phosphatase family 12 259 1.0E-63 T 28-03-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type DDI_RS21220 c157be284aa9e43c087743bfa9725762 260 Gene3D G3DSA:3.90.190.10 26 200 3.8E-17 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like DDI_RS06030 f07118fcfe29453987faff99819543fc 240 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 11 231 1.6E-105 T 28-03-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS06030 f07118fcfe29453987faff99819543fc 240 Gene3D G3DSA:3.40.50.300 7 237 5.2E-44 T 28-03-2018 DDI_RS06030 f07118fcfe29453987faff99819543fc 240 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06030 f07118fcfe29453987faff99819543fc 240 SMART SM00382 42 235 4.5E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06030 f07118fcfe29453987faff99819543fc 240 SUPERFAMILY SSF52540 10 232 1.14E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06030 f07118fcfe29453987faff99819543fc 240 Pfam PF00005 ABC transporter 33 187 1.2E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS15405 23842de8d547fa89fea213e93c6abe4c 349 SUPERFAMILY SSF55120 4 338 8.63E-104 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS15405 23842de8d547fa89fea213e93c6abe4c 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 4 338 1.0E-73 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS15405 23842de8d547fa89fea213e93c6abe4c 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 28-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 DDI_RS15405 23842de8d547fa89fea213e93c6abe4c 349 Gene3D G3DSA:3.30.2340.10 167 302 4.2E-31 T 28-03-2018 DDI_RS15405 23842de8d547fa89fea213e93c6abe4c 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 28.292 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS15405 23842de8d547fa89fea213e93c6abe4c 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 190 337 2.3E-16 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS15405 23842de8d547fa89fea213e93c6abe4c 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 11 167 8.3E-40 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.998 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 SUPERFAMILY SSF55347 154 308 5.42E-51 T 28-03-2018 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 2.9E-127 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 SUPERFAMILY SSF51735 2 179 2.71E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 Gene3D G3DSA:3.40.50.720 1 162 1.4E-45 T 28-03-2018 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 Gene3D G3DSA:3.30.360.10 163 308 4.7E-50 T 28-03-2018 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 SMART SM00859 3 146 1.7E-53 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.6E-34 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDI_RS21235 205d9225821dbdcb814af80c2601b141 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 1.3E-14 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDI_RS19655 9ab1b39cdcc45c3cd49f1da7a8de2b03 456 Gene3D G3DSA:3.40.190.10 168 453 9.7E-31 T 28-03-2018 DDI_RS19655 9ab1b39cdcc45c3cd49f1da7a8de2b03 456 Gene3D G3DSA:3.40.190.10 43 167 1.1E-12 T 28-03-2018 DDI_RS19655 9ab1b39cdcc45c3cd49f1da7a8de2b03 456 SUPERFAMILY SSF53850 55 423 1.27E-49 T 28-03-2018 DDI_RS19655 9ab1b39cdcc45c3cd49f1da7a8de2b03 456 Pfam PF01547 Bacterial extracellular solute-binding protein 55 354 5.6E-24 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 DDI_RS00825 f90e45834a189d4e402ad18f873879a3 88 SUPERFAMILY SSF47413 3 71 4.5E-29 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS00825 f90e45834a189d4e402ad18f873879a3 88 Gene3D G3DSA:1.10.260.40 1 72 1.3E-12 T 28-03-2018 DDI_RS00825 f90e45834a189d4e402ad18f873879a3 88 Pfam PF13693 Winged helix-turn-helix DNA-binding 6 79 8.5E-37 T 28-03-2018 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 Pfam PF00571 CBS domain 96 140 1.6E-7 T 28-03-2018 IPR000644 CBS domain DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 Pfam PF00571 CBS domain 149 202 7.8E-6 T 28-03-2018 IPR000644 CBS domain DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 SUPERFAMILY SSF51412 217 477 1.83E-124 T 28-03-2018 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 SUPERFAMILY SSF51412 1 90 1.83E-124 T 28-03-2018 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 Gene3D G3DSA:3.20.20.70 1 482 1.5E-115 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 5.6E-197 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.616 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 PIRSF PIRSF000130 1 487 1.4E-196 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 SMART SM00116 158 206 3.5E-9 T 28-03-2018 IPR000644 CBS domain DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 SMART SM00116 96 144 3.4E-10 T 28-03-2018 IPR000644 CBS domain DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 SUPERFAMILY SSF54631 95 203 6.32E-26 T 28-03-2018 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 SMART SM01240 7 473 0.0 T 28-03-2018 DDI_RS13980 27cf648cf7ca459e14bc8736f6c58080 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 6.7E-160 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DDI_RS11360 32036874925917008f9135668d4d67ad 631 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 485 605 3.6E-45 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS11360 32036874925917008f9135668d4d67ad 631 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 484 609 4.6E-48 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS11360 32036874925917008f9135668d4d67ad 631 SUPERFAMILY SSF55604 6 79 2.75E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS11360 32036874925917008f9135668d4d67ad 631 Gene3D G3DSA:3.30.1360.60 2 76 6.7E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS11360 32036874925917008f9135668d4d67ad 631 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS11360 32036874925917008f9135668d4d67ad 631 Pfam PF00367 phosphotransferase system, EIIB 9 41 1.8E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS11360 32036874925917008f9135668d4d67ad 631 SUPERFAMILY SSF51261 481 627 2.09E-51 T 28-03-2018 IPR011055 Duplicated hybrid motif DDI_RS11360 32036874925917008f9135668d4d67ad 631 Pfam PF02378 Phosphotransferase system, EIIC 108 393 2.6E-27 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS11360 32036874925917008f9135668d4d67ad 631 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 547 559 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS11360 32036874925917008f9135668d4d67ad 631 Gene3D G3DSA:2.70.70.10 472 631 8.5E-56 T 28-03-2018 DDI_RS11360 32036874925917008f9135668d4d67ad 631 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 627 7.3E-213 T 28-03-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 DDI_RS12995 321d702b33dbc4f56813a036997b4a1e 523 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 24 515 53.281 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DDI_RS12995 321d702b33dbc4f56813a036997b4a1e 523 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 27 515 4.9E-238 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DDI_RS12995 321d702b33dbc4f56813a036997b4a1e 523 SUPERFAMILY SSF51905 22 151 3.11E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12995 321d702b33dbc4f56813a036997b4a1e 523 SUPERFAMILY SSF51905 184 355 3.11E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12995 321d702b33dbc4f56813a036997b4a1e 523 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 28 513 1.4E-208 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DDI_RS12995 321d702b33dbc4f56813a036997b4a1e 523 Gene3D G3DSA:3.50.50.60 20 460 2.1E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12610 10503b29735b070a398eca1193b5ebba 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 28-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site DDI_RS12610 10503b29735b070a398eca1193b5ebba 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 2.8E-31 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 DDI_RS12610 10503b29735b070a398eca1193b5ebba 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.682 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 DDI_RS12610 10503b29735b070a398eca1193b5ebba 113 PIRSF PIRSF004761 1 113 2.8E-37 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 DDI_RS12610 10503b29735b070a398eca1193b5ebba 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 6.3E-39 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 DDI_RS04220 cf6e01853a4fc5aa50f991a25bd6c8ff 396 Pfam PF00248 Aldo/keto reductase family 76 383 4.8E-43 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS04220 cf6e01853a4fc5aa50f991a25bd6c8ff 396 SUPERFAMILY SSF51430 74 384 1.44E-54 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS04220 cf6e01853a4fc5aa50f991a25bd6c8ff 396 Gene3D G3DSA:3.20.20.100 70 386 4.9E-54 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS03710 3c3d172387bb07999c421890a2af9e2f 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.202 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DDI_RS03710 3c3d172387bb07999c421890a2af9e2f 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.8E-158 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DDI_RS03710 3c3d172387bb07999c421890a2af9e2f 274 SUPERFAMILY SSF51161 1 256 1.94E-79 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS03710 3c3d172387bb07999c421890a2af9e2f 274 Gene3D G3DSA:1.10.166.10 3 69 2.1E-28 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 DDI_RS03710 3c3d172387bb07999c421890a2af9e2f 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 4.5E-25 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 DDI_RS03710 3c3d172387bb07999c421890a2af9e2f 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.2E-12 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS03710 3c3d172387bb07999c421890a2af9e2f 274 Gene3D G3DSA:2.160.10.10 87 257 1.5E-34 T 28-03-2018 DDI_RS19830 bdd2133041653b9e7645e3ac3d198ff5 457 Pfam PF06969 HemN C-terminal domain 363 431 3.2E-7 T 28-03-2018 IPR010723 HemN, C-terminal DDI_RS19830 bdd2133041653b9e7645e3ac3d198ff5 457 SMART SM00729 52 272 5.3E-55 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS19830 bdd2133041653b9e7645e3ac3d198ff5 457 SUPERFAMILY SSF102114 6 444 2.35E-141 T 28-03-2018 DDI_RS19830 bdd2133041653b9e7645e3ac3d198ff5 457 Pfam PF04055 Radical SAM superfamily 58 226 4.9E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS19830 bdd2133041653b9e7645e3ac3d198ff5 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 3.8E-215 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 DDI_RS19830 bdd2133041653b9e7645e3ac3d198ff5 457 Gene3D G3DSA:3.20.20.70 29 352 1.9E-46 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS19830 bdd2133041653b9e7645e3ac3d198ff5 457 PIRSF PIRSF000167 4 454 8.1E-172 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.2E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 SUPERFAMILY SSF50249 3 68 2.4E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 28-03-2018 IPR019844 Cold-shock conserved site DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 SMART SM00357 5 69 4.8E-32 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 Gene3D G3DSA:2.40.50.140 1 69 1.4E-29 T 28-03-2018 DDI_RS09890 0e3ace447f9e3e2e659fce73eb5f55fe 69 PIRSF PIRSF002599 1 69 5.5E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 DDI_RS11825 26e1f5cfa596946848b464ce66d0ab3d 192 SUPERFAMILY SSF101874 23 191 5.62E-55 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DDI_RS11825 26e1f5cfa596946848b464ce66d0ab3d 192 Hamap MF_00780 Protein YceI [yceI]. 2 192 44.787 T 28-03-2018 IPR023480 Uncharacterised protein family UPF0312/YceI DDI_RS11825 26e1f5cfa596946848b464ce66d0ab3d 192 SMART SM00867 25 189 2.8E-71 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DDI_RS11825 26e1f5cfa596946848b464ce66d0ab3d 192 Gene3D G3DSA:2.40.128.110 24 192 3.2E-49 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DDI_RS11825 26e1f5cfa596946848b464ce66d0ab3d 192 Pfam PF04264 YceI-like domain 26 187 4.9E-40 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DDI_RS19055 7ab9fd2126bb73002fd0c71a037782eb 298 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 3.2E-106 T 28-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 DDI_RS19055 7ab9fd2126bb73002fd0c71a037782eb 298 Gene3D G3DSA:3.20.20.220 1 298 2.5E-100 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like DDI_RS19055 7ab9fd2126bb73002fd0c71a037782eb 298 SUPERFAMILY SSF51730 22 293 1.79E-97 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like DDI_RS19055 7ab9fd2126bb73002fd0c71a037782eb 298 Pfam PF02219 Methylenetetrahydrofolate reductase 18 291 3.7E-111 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 SUPERFAMILY SSF69742 1 158 4.58E-47 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 6.7E-49 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 PIRSF PIRSF000445 1 418 1.7E-156 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 1.2E-24 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 Gene3D G3DSA:3.40.50.720 161 315 1.4E-23 T 28-03-2018 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 SUPERFAMILY SSF51735 162 315 1.25E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.52 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 1.0E-158 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 SUPERFAMILY SSF69075 317 417 4.32E-28 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 2.5E-48 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 28-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDI_RS09615 990ee37f5ab55b11480753608edb897f 418 Gene3D G3DSA:1.10.1200.70 332 418 3.8E-23 T 28-03-2018 DDI_RS08285 2f06ab3bbc2eeaf531a7725deddca16f 96 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 81 3.0E-28 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 DDI_RS08285 2f06ab3bbc2eeaf531a7725deddca16f 96 PIRSF PIRSF002736 1 96 6.6E-39 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 DDI_RS08285 2f06ab3bbc2eeaf531a7725deddca16f 96 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 96 27.294 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 DDI_RS08285 2f06ab3bbc2eeaf531a7725deddca16f 96 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 93 1.0E-33 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 DDI_RS08285 2f06ab3bbc2eeaf531a7725deddca16f 96 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 85 3.1E-29 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DDI_RS02755 140dab9902b726382e33bfb26e87d523 285 Gene3D G3DSA:1.10.10.10 4 88 7.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02755 140dab9902b726382e33bfb26e87d523 285 Pfam PF01380 SIS domain 139 264 1.9E-19 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS02755 140dab9902b726382e33bfb26e87d523 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 75 2.3E-11 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DDI_RS02755 140dab9902b726382e33bfb26e87d523 285 Gene3D G3DSA:3.40.50.10490 105 284 5.9E-29 T 28-03-2018 DDI_RS02755 140dab9902b726382e33bfb26e87d523 285 SUPERFAMILY SSF53697 106 280 2.02E-29 T 28-03-2018 DDI_RS02755 140dab9902b726382e33bfb26e87d523 285 SUPERFAMILY SSF46689 9 85 8.24E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Gene3D G3DSA:3.90.199.10 286 375 2.9E-10 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.9E-8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 540 584 4.5E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 7.4E-15 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 4.0E-14 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 3.1E-13 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 9.8E-12 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 SMART SM00434 11 499 0.0 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 SUPERFAMILY SSF101904 533 849 5.23E-114 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 4.6E-155 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 SUPERFAMILY SSF56719 30 521 4.58E-184 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.726 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Gene3D G3DSA:3.90.199.10 34 285 1.6E-117 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Gene3D G3DSA:2.120.10.90 533 852 4.7E-136 T 28-03-2018 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 28-03-2018 DDI_RS04535 408eb6d2262ec95b62d849c10c468c77 877 Gene3D G3DSA:1.10.268.10 376 497 9.5E-50 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS20220 38ec7a3fad0f3f5349ef58578d677ac7 380 Gene3D G3DSA:3.40.640.10 4 245 1.5E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS20220 38ec7a3fad0f3f5349ef58578d677ac7 380 Gene3D G3DSA:3.90.1150.10 246 379 4.2E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS20220 38ec7a3fad0f3f5349ef58578d677ac7 380 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 373 2.8E-133 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DDI_RS20220 38ec7a3fad0f3f5349ef58578d677ac7 380 PIRSF PIRSF000390 1 379 1.1E-113 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DDI_RS20220 38ec7a3fad0f3f5349ef58578d677ac7 380 SUPERFAMILY SSF53383 4 375 8.07E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS20220 38ec7a3fad0f3f5349ef58578d677ac7 380 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 70.196 T 28-03-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.629 T 28-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 106 2.2E-31 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 Gene3D G3DSA:1.10.287.1080 111 204 2.0E-19 T 28-03-2018 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 1.0E-24 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 1.3E-28 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 SUPERFAMILY SSF101386 114 202 6.11E-22 T 28-03-2018 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 17.903 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 7.3E-14 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DDI_RS08210 6348e2d3dc2b863d9a1ff9c6a780445e 204 SUPERFAMILY SSF141734 6 122 4.71E-47 T 28-03-2018 DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 SUPERFAMILY SSF51735 3 254 1.33E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0017 T 28-03-2018 DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 Pfam PF00106 short chain dehydrogenase 3 191 6.6E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 2.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 2.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 Gene3D G3DSA:3.40.50.720 2 258 5.2E-50 T 28-03-2018 DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.1E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.1E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.1E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS04620 4b7421b06bb59d125d7874f7abc83c14 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.1E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 Gene3D G3DSA:3.20.19.10 653 892 6.1E-90 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 SUPERFAMILY SSF52016 631 891 1.35E-86 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 Gene3D G3DSA:3.30.499.10 34 240 4.4E-75 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 891 0.0 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 Gene3D G3DSA:3.40.1060.10 241 372 3.8E-44 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 Pfam PF00330 Aconitase family (aconitate hydratase) 73 563 8.7E-184 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 Pfam PF00694 Aconitase C-terminal domain 692 819 1.3E-46 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 SUPERFAMILY SSF53732 11 626 1.27E-220 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 ProSitePatterns PS01244 Aconitase family signature 2. 494 507 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 ProSitePatterns PS00450 Aconitase family signature 1. 428 444 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 373 387 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 171 179 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 432 443 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 204 217 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 294 307 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 280 293 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 494 507 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 218 233 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 PRINTS PR00415 Aconitase family signature 147 160 1.2E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS11165 c4ce1a51abb7316c6062d91c0b8a0971 893 Gene3D G3DSA:3.30.499.10 373 577 1.9E-63 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS07795 3581cd976925034ab8c176d80644bf84 248 Gene3D G3DSA:3.30.559.10 2 244 2.1E-28 T 28-03-2018 DDI_RS07795 3581cd976925034ab8c176d80644bf84 248 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 5 123 1.1E-7 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS07795 3581cd976925034ab8c176d80644bf84 248 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 165 242 2.5E-8 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 DDI_RS07795 3581cd976925034ab8c176d80644bf84 248 SUPERFAMILY SSF52777 2 134 8.9E-27 T 28-03-2018 DDI_RS07795 3581cd976925034ab8c176d80644bf84 248 SUPERFAMILY SSF52777 165 242 8.9E-27 T 28-03-2018 DDI_RS08945 191918b76eef85bd16f77884b761b0fe 183 PIRSF PIRSF000232 1 182 2.5E-64 T 28-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like DDI_RS08945 191918b76eef85bd16f77884b761b0fe 183 Gene3D G3DSA:3.40.109.10 1 183 3.5E-29 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDI_RS08945 191918b76eef85bd16f77884b761b0fe 183 SUPERFAMILY SSF55469 1 173 1.96E-38 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDI_RS08945 191918b76eef85bd16f77884b761b0fe 183 Pfam PF00881 Nitroreductase family 8 161 2.9E-19 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DDI_RS17990 f6439036b7793ca11c18d33d7bac2da4 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.1E-22 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17990 f6439036b7793ca11c18d33d7bac2da4 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17990 f6439036b7793ca11c18d33d7bac2da4 38 Pfam PF00444 Ribosomal protein L36 1 38 2.2E-20 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17990 f6439036b7793ca11c18d33d7bac2da4 38 SUPERFAMILY SSF57840 1 38 5.76E-17 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17990 f6439036b7793ca11c18d33d7bac2da4 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 5.0E-10 T 28-03-2018 DDI_RS17990 f6439036b7793ca11c18d33d7bac2da4 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.855 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18480 f6a9145e146570bff458db917ea7547c 255 Gene3D G3DSA:3.40.50.1820 3 254 3.1E-54 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS18480 f6a9145e146570bff458db917ea7547c 255 Pfam PF00561 alpha/beta hydrolase fold 16 242 6.6E-23 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS18480 f6a9145e146570bff458db917ea7547c 255 SUPERFAMILY SSF53474 4 253 1.26E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS18480 f6a9145e146570bff458db917ea7547c 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.2 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 DDI_RS18480 f6a9145e146570bff458db917ea7547c 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 3.9E-96 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 DDI_RS14615 49132dba09e78903842a2ef37060f2d7 320 Gene3D G3DSA:1.10.620.20 2 293 1.2E-73 T 28-03-2018 DDI_RS14615 49132dba09e78903842a2ef37060f2d7 320 PIRSF PIRSF000355 4 317 8.2E-77 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14615 49132dba09e78903842a2ef37060f2d7 320 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 98 114 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14615 49132dba09e78903842a2ef37060f2d7 320 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 8 320 3.4E-142 T 28-03-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDI_RS14615 49132dba09e78903842a2ef37060f2d7 320 Pfam PF00268 Ribonucleotide reductase, small chain 10 274 3.6E-83 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDI_RS14615 49132dba09e78903842a2ef37060f2d7 320 SUPERFAMILY SSF47240 7 320 3.49E-100 T 28-03-2018 IPR009078 Ferritin-like superfamily DDI_RS18425 ba48135670532a78bb844d805c497063 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 8.5E-9 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18425 ba48135670532a78bb844d805c497063 234 SUPERFAMILY SSF56784 6 200 5.93E-42 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18425 ba48135670532a78bb844d805c497063 234 Gene3D G3DSA:3.40.50.1000 7 37 0.37 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18425 ba48135670532a78bb844d805c497063 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 3.6E-16 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18425 ba48135670532a78bb844d805c497063 234 Gene3D G3DSA:3.40.50.1000 38 203 7.2E-20 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18425 ba48135670532a78bb844d805c497063 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 7.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18425 ba48135670532a78bb844d805c497063 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 7.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18425 ba48135670532a78bb844d805c497063 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 7.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18425 ba48135670532a78bb844d805c497063 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 7.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS20175 28046843bdc7553ab49a01128e9dd2e3 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 255 2.1E-57 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS20175 28046843bdc7553ab49a01128e9dd2e3 278 Gene3D G3DSA:3.40.190.10 3 145 2.2E-36 T 28-03-2018 DDI_RS20175 28046843bdc7553ab49a01128e9dd2e3 278 SMART SM00062 34 257 5.3E-62 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS20175 28046843bdc7553ab49a01128e9dd2e3 278 Gene3D G3DSA:3.40.190.10 146 264 3.2E-12 T 28-03-2018 DDI_RS20175 28046843bdc7553ab49a01128e9dd2e3 278 SUPERFAMILY SSF53850 1 256 1.25E-66 T 28-03-2018 DDI_RS20175 28046843bdc7553ab49a01128e9dd2e3 278 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 237 1.2E-86 T 28-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 Pfam PF04542 Sigma-70 region 2 16 88 5.0E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 5.1E-32 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 Gene3D G3DSA:1.10.1740.10 2 86 1.1E-21 T 28-03-2018 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 SUPERFAMILY SSF88659 90 156 4.8E-17 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 Gene3D G3DSA:1.10.10.10 90 137 2.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 Gene3D G3DSA:1.10.10.10 144 239 8.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.246 T 28-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 2.0E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 2.0E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 2.0E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.0E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 2.0E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 PIRSF PIRSF000770 1 240 4.0E-44 T 28-03-2018 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 SUPERFAMILY SSF88946 5 88 4.4E-23 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 Pfam PF04545 Sigma-70, region 4 185 234 1.4E-17 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 SUPERFAMILY SSF88659 150 237 4.11E-21 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS11930 6b05a349c289637e9901b3f729ec347a 240 Pfam PF04539 Sigma-70 region 3 97 163 2.9E-16 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS09960 e18db808c8fcb6e87facb785638e14c2 192 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 159 2.8E-34 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DDI_RS09960 e18db808c8fcb6e87facb785638e14c2 192 PIRSF PIRSF030780 1 191 1.9E-88 T 28-03-2018 IPR016956 Inner membrane protein YdjM DDI_RS18930 0c953c657c987d7abb7cba24541f3413 616 Pfam PF00920 Dehydratase family 34 607 1.2E-218 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDI_RS18930 0c953c657c987d7abb7cba24541f3413 616 Gene3D G3DSA:3.40.50.2300 51 177 0.0062 T 28-03-2018 DDI_RS18930 0c953c657c987d7abb7cba24541f3413 616 SUPERFAMILY SSF143975 3 420 1.01E-133 T 28-03-2018 DDI_RS18930 0c953c657c987d7abb7cba24541f3413 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDI_RS18930 0c953c657c987d7abb7cba24541f3413 616 SUPERFAMILY SSF52016 421 610 3.45E-59 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DDI_RS18930 0c953c657c987d7abb7cba24541f3413 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 4.2E-266 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDI_RS18930 0c953c657c987d7abb7cba24541f3413 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDI_RS18930 0c953c657c987d7abb7cba24541f3413 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.306 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDI_RS04355 01c2ac2614b61d02d832d302dc657d47 109 Gene3D G3DSA:1.10.10.10 3 107 1.1E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04355 01c2ac2614b61d02d832d302dc657d47 109 SUPERFAMILY SSF46767 6 88 1.1E-23 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DDI_RS04355 01c2ac2614b61d02d832d302dc657d47 109 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 87 8.2E-24 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DDI_RS05645 df92c6b8ef4076a9032740eb0c88453e 299 Pfam PF12833 Helix-turn-helix domain 209 284 4.9E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS05645 df92c6b8ef4076a9032740eb0c88453e 299 SMART SM00342 203 286 9.7E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS05645 df92c6b8ef4076a9032740eb0c88453e 299 Gene3D G3DSA:1.10.10.60 185 242 6.2E-15 T 28-03-2018 DDI_RS05645 df92c6b8ef4076a9032740eb0c88453e 299 SUPERFAMILY SSF46689 187 237 6.8E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS05645 df92c6b8ef4076a9032740eb0c88453e 299 Gene3D G3DSA:1.10.10.60 243 296 3.6E-12 T 28-03-2018 DDI_RS05645 df92c6b8ef4076a9032740eb0c88453e 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 174 7.2E-42 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DDI_RS05645 df92c6b8ef4076a9032740eb0c88453e 299 SUPERFAMILY SSF46689 239 290 1.43E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 242 257 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 SUPERFAMILY SSF46689 369 465 4.44E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 SUPERFAMILY SSF52540 159 398 5.84E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 SUPERFAMILY SSF52172 4 201 2.99E-35 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 Pfam PF02954 Bacterial regulatory protein, Fis family 421 462 3.4E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 Pfam PF00072 Response regulator receiver domain 7 121 1.1E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 Gene3D G3DSA:3.40.50.300 146 340 2.3E-35 T 28-03-2018 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 Gene3D G3DSA:1.10.8.60 341 396 2.4E-21 T 28-03-2018 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 SMART SM00448 5 121 2.0E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 SMART SM00382 176 319 6.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 465 4.0E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 445 4.0E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 Gene3D G3DSA:3.40.50.2300 2 145 9.1E-27 T 28-03-2018 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 Gene3D G3DSA:1.10.10.60 397 465 4.5E-12 T 28-03-2018 DDI_RS20755 43f6c976a5d507392f953ee2829af850 467 Pfam PF00158 Sigma-54 interaction domain 158 322 1.3E-63 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 Pfam PF00106 short chain dehydrogenase 7 187 2.3E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 Gene3D G3DSA:3.40.50.720 3 248 7.0E-54 T 28-03-2018 DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.3E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.3E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.3E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS17380 8cfad3958a43ec5a5128509d6a9c3d7f 250 SUPERFAMILY SSF51735 7 233 1.11E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 Gene3D G3DSA:3.30.428.10 45 164 2.7E-50 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 28-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 7 176 1.1E-70 T 28-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 SUPERFAMILY SSF54197 179 345 1.7E-57 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 9.8E-68 T 28-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 SUPERFAMILY SSF54197 3 177 1.36E-72 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 347 1.2E-196 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 Gene3D G3DSA:3.30.428.10 165 346 2.2E-56 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 DDI_RS05250 a38b80d37eb12731997ee01678b33014 350 PIRSF PIRSF000808 1 341 2.0E-123 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 DDI_RS03065 096781c55446dc2cce401dae7354298a 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 299 1.9E-67 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS03065 096781c55446dc2cce401dae7354298a 322 Gene3D G3DSA:3.40.50.1100 20 133 1.0E-31 T 28-03-2018 DDI_RS03065 096781c55446dc2cce401dae7354298a 322 SUPERFAMILY SSF53686 3 316 3.54E-98 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS03065 096781c55446dc2cce401dae7354298a 322 Gene3D G3DSA:3.40.50.1100 134 314 1.1E-58 T 28-03-2018 DDI_RS03065 096781c55446dc2cce401dae7354298a 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DDI_RS03065 096781c55446dc2cce401dae7354298a 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 311 5.4E-144 T 28-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DDI_RS03065 096781c55446dc2cce401dae7354298a 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 11 311 6.6E-136 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DDI_RS16755 fc575a18b3cafc2868af780aaf9a73bd 587 SUPERFAMILY SSF56601 234 562 4.35E-86 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS16755 fc575a18b3cafc2868af780aaf9a73bd 587 Gene3D G3DSA:3.40.710.10 235 585 6.0E-77 T 28-03-2018 DDI_RS16755 fc575a18b3cafc2868af780aaf9a73bd 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 3.9E-18 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DDI_RS16755 fc575a18b3cafc2868af780aaf9a73bd 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 4.4E-83 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DDI_RS16755 fc575a18b3cafc2868af780aaf9a73bd 587 Gene3D G3DSA:3.90.1310.10 36 234 6.5E-41 T 28-03-2018 DDI_RS16755 fc575a18b3cafc2868af780aaf9a73bd 587 SUPERFAMILY SSF56519 62 233 3.27E-44 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DDI_RS20255 0daeeec977fd0fe07a9d07f479c4eaff 162 SUPERFAMILY SSF55729 3 148 6.58E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS20255 0daeeec977fd0fe07a9d07f479c4eaff 162 Gene3D G3DSA:3.40.630.30 1 86 2.0E-19 T 28-03-2018 DDI_RS20255 0daeeec977fd0fe07a9d07f479c4eaff 162 Gene3D G3DSA:3.40.630.30 87 155 6.8E-15 T 28-03-2018 DDI_RS20255 0daeeec977fd0fe07a9d07f479c4eaff 162 Pfam PF00583 Acetyltransferase (GNAT) family 34 136 1.2E-21 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 478 4.5E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 SUPERFAMILY SSF58104 230 511 4.32E-68 T 28-03-2018 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 Gene3D G3DSA:1.10.287.950 209 314 1.6E-10 T 28-03-2018 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 SMART SM00283 263 510 2.6E-79 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 Gene3D G3DSA:1.20.120.30 19 183 1.1E-11 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 4.6E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 4.6E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 4.6E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 4.6E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 23 4.6E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 181 2.4E-19 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS11905 a47375403e105a8d679b218999c51bfa 534 Gene3D G3DSA:1.10.287.950 315 514 2.7E-47 T 28-03-2018 DDI_RS04145 c351c92db99221a4b1930507b88b48d3 186 Gene3D G3DSA:2.60.40.1620 42 174 9.4E-51 T 28-03-2018 IPR021658 Domain of unknown function DUF3251 DDI_RS04145 c351c92db99221a4b1930507b88b48d3 186 Pfam PF11622 Protein of unknown function (DUF3251) 20 175 1.5E-55 T 28-03-2018 IPR021658 Domain of unknown function DUF3251 DDI_RS20370 d0e64137abf28f37a6be101b991d703b 280 Gene3D G3DSA:3.40.50.150 1 280 4.4E-92 T 28-03-2018 DDI_RS20370 d0e64137abf28f37a6be101b991d703b 280 SUPERFAMILY SSF53335 9 279 7.43E-99 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS20370 d0e64137abf28f37a6be101b991d703b 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 42.004 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DDI_RS20370 d0e64137abf28f37a6be101b991d703b 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 4.0E-112 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DDI_RS14255 15eee7cd2dd909e3e84856dacde9bf2e 243 SUPERFAMILY SSF63892 4 242 3.79E-102 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DDI_RS14255 15eee7cd2dd909e3e84856dacde9bf2e 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 8.6E-105 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DDI_RS14255 15eee7cd2dd909e3e84856dacde9bf2e 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.7E-105 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DDI_RS14255 15eee7cd2dd909e3e84856dacde9bf2e 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 134.944 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DDI_RS14255 15eee7cd2dd909e3e84856dacde9bf2e 243 Gene3D G3DSA:3.20.20.70 4 238 1.7E-105 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS06165 6920837cf7672665cf457fe3b5b4ebd3 343 Pfam PF01032 FecCD transport family 30 340 1.8E-85 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 DDI_RS06165 6920837cf7672665cf457fe3b5b4ebd3 343 Gene3D G3DSA:1.10.3470.10 5 343 2.1E-61 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS06165 6920837cf7672665cf457fe3b5b4ebd3 343 SUPERFAMILY SSF81345 16 340 2.75E-76 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS13135 3cd7b143b11b9f85f218cb83a55c8db9 246 SUPERFAMILY SSF54523 39 194 2.15E-45 T 28-03-2018 DDI_RS13135 3cd7b143b11b9f85f218cb83a55c8db9 246 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13135 3cd7b143b11b9f85f218cb83a55c8db9 246 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 1.0E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13135 3cd7b143b11b9f85f218cb83a55c8db9 246 Pfam PF11612 Type II secretion system (T2SS), protein J 58 190 5.8E-35 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 DDI_RS13135 3cd7b143b11b9f85f218cb83a55c8db9 246 Gene3D G3DSA:3.10.610.10 38 144 5.8E-28 T 28-03-2018 DDI_RS13135 3cd7b143b11b9f85f218cb83a55c8db9 246 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 5.6E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13135 3cd7b143b11b9f85f218cb83a55c8db9 246 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 7 192 1.2E-62 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 DDI_RS13135 3cd7b143b11b9f85f218cb83a55c8db9 246 Gene3D G3DSA:2.10.70.20 149 195 8.4E-13 T 28-03-2018 DDI_RS18315 518cb1f82e669b31f44ad38fa9a416da 342 SUPERFAMILY SSF90112 221 308 7.06E-10 T 28-03-2018 IPR006029 Neurotransmitter-gated ion-channel transmembrane domain GO:0006811|GO:0016021 DDI_RS18315 518cb1f82e669b31f44ad38fa9a416da 342 Pfam PF02931 Neurotransmitter-gated ion-channel ligand binding domain 27 219 2.5E-17 T 28-03-2018 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006811|GO:0016021 DDI_RS18315 518cb1f82e669b31f44ad38fa9a416da 342 Gene3D G3DSA:2.70.170.10 23 226 3.0E-29 T 28-03-2018 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006811|GO:0016021 DDI_RS18315 518cb1f82e669b31f44ad38fa9a416da 342 SUPERFAMILY SSF63712 29 215 2.75E-21 T 28-03-2018 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006811|GO:0016021 DDI_RS18315 518cb1f82e669b31f44ad38fa9a416da 342 Gene3D G3DSA:1.20.58.390 227 342 1.1E-17 T 28-03-2018 DDI_RS05805 67000ba4a65cd3234ebf711aca2d2572 238 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 190 200 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS05805 67000ba4a65cd3234ebf711aca2d2572 238 Gene3D G3DSA:3.40.50.1860 120 215 4.0E-22 T 28-03-2018 DDI_RS05805 67000ba4a65cd3234ebf711aca2d2572 238 Gene3D G3DSA:3.40.50.1860 1 119 3.5E-38 T 28-03-2018 DDI_RS05805 67000ba4a65cd3234ebf711aca2d2572 238 SUPERFAMILY SSF53681 104 204 5.63E-23 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS05805 67000ba4a65cd3234ebf711aca2d2572 238 TIGRFAM TIGR00035 asp_race: aspartate racemase 4 224 4.4E-56 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 DDI_RS05805 67000ba4a65cd3234ebf711aca2d2572 238 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 224 2.1E-64 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS05805 67000ba4a65cd3234ebf711aca2d2572 238 SUPERFAMILY SSF53681 4 114 1.24E-33 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS00045 891f117f9eb29de3429bb3bbdd60afa4 400 Pfam PF00872 Transposase, Mutator family 10 373 4.7E-101 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 DDI_RS00045 891f117f9eb29de3429bb3bbdd60afa4 400 Gene3D G3DSA:1.10.10.10 86 173 1.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15085 eb684ecd49083f64365eaba050cb6151 416 Gene3D G3DSA:1.20.1440.110 48 153 2.6E-24 T 28-03-2018 DDI_RS15085 eb684ecd49083f64365eaba050cb6151 416 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 2 415 2.7E-189 T 28-03-2018 IPR010520 UPF0255 family DDI_RS15085 eb684ecd49083f64365eaba050cb6151 416 SUPERFAMILY SSF53474 47 415 1.34E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS15085 eb684ecd49083f64365eaba050cb6151 416 Hamap MF_01063 Esterase FrsA [frsA]. 1 416 58.911 T 28-03-2018 IPR010520 UPF0255 family DDI_RS15085 eb684ecd49083f64365eaba050cb6151 416 Gene3D G3DSA:3.40.50.1820 154 416 4.6E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS08895 7e629829780e5d392f47e9abe850523e 644 Pfam PF08298 PrkA AAA domain 20 380 3.4E-175 T 28-03-2018 IPR013153 PrkA AAA domain DDI_RS08895 7e629829780e5d392f47e9abe850523e 644 SMART SM00763 19 380 2.0E-213 T 28-03-2018 IPR013153 PrkA AAA domain DDI_RS08895 7e629829780e5d392f47e9abe850523e 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 5.8E-74 T 28-03-2018 IPR010650 PrkA C-terminal domain DDI_RS08895 7e629829780e5d392f47e9abe850523e 644 Gene3D G3DSA:3.40.50.300 65 354 1.1E-13 T 28-03-2018 DDI_RS08895 7e629829780e5d392f47e9abe850523e 644 PIRSF PIRSF000549 1 644 1.2E-290 T 28-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 DDI_RS08895 7e629829780e5d392f47e9abe850523e 644 SUPERFAMILY SSF52540 75 145 1.75E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08895 7e629829780e5d392f47e9abe850523e 644 SUPERFAMILY SSF52540 241 368 1.75E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04845 141c54fefd7bdea6c86b6a315f7ed7e9 224 SUPERFAMILY SSF52374 15 224 3.75E-59 T 28-03-2018 DDI_RS04845 141c54fefd7bdea6c86b6a315f7ed7e9 224 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 14 224 31.127 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DDI_RS04845 141c54fefd7bdea6c86b6a315f7ed7e9 224 Gene3D G3DSA:3.40.50.620 9 224 2.5E-57 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS04845 141c54fefd7bdea6c86b6a315f7ed7e9 224 Pfam PF01467 Cytidylyltransferase-like 18 198 4.0E-34 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS04845 141c54fefd7bdea6c86b6a315f7ed7e9 224 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 19 223 3.3E-58 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DDI_RS04845 141c54fefd7bdea6c86b6a315f7ed7e9 224 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 79 1.4E-10 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS01980 783c9ea71912ee7541c3e09dfae3f69e 946 Gene3D G3DSA:1.20.5.1230 453 791 1.6E-8 T 28-03-2018 DDI_RS01980 783c9ea71912ee7541c3e09dfae3f69e 946 Gene3D G3DSA:1.20.120.570 4 189 0.0019 T 28-03-2018 DDI_RS01980 783c9ea71912ee7541c3e09dfae3f69e 946 Pfam PF10145 Phage-related minor tail protein 243 450 1.8E-21 T 28-03-2018 IPR010090 Phage tail tape measure protein DDI_RS01980 783c9ea71912ee7541c3e09dfae3f69e 946 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 199 557 9.6E-62 T 28-03-2018 IPR010090 Phage tail tape measure protein DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 3.9E-38 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 3.1E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 3.1E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 3.1E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 Gene3D G3DSA:2.40.50.140 5 82 1.3E-34 T 28-03-2018 DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.097 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 SUPERFAMILY SSF50249 5 82 1.37E-33 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 Pfam PF00366 Ribosomal protein S17 10 76 2.5E-34 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 28-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18050 229757ba32cefb8c70a802c49c04e1a3 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 3.0E-36 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 Gene3D G3DSA:3.40.50.1370 5 163 6.8E-57 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.0E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.0E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.0E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.0E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.0E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 8.6E-54 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 Gene3D G3DSA:3.40.50.1370 164 334 6.4E-49 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 5.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 5.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 5.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 5.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.263 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 SUPERFAMILY SSF53671 1 333 4.12E-98 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 7.2E-132 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDI_RS00710 ed4e9ffecfa312831073710f1c68d356 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 5.8E-47 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DDI_RS02715 786f1fc4b83341288b6d6fbaffd152e5 241 Pfam PF06788 Uncharacterised protein family (UPF0257) 1 241 2.8E-99 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 DDI_RS02715 786f1fc4b83341288b6d6fbaffd152e5 241 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 219 2.0E-24 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 DDI_RS02715 786f1fc4b83341288b6d6fbaffd152e5 241 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 2 241 36.735 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 Gene3D G3DSA:2.20.150.10 12 46 8.1E-11 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.2E-101 T 28-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 Pfam PF00294 pfkB family carbohydrate kinase 14 294 4.2E-66 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 Gene3D G3DSA:3.40.1190.20 47 312 3.2E-51 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 4.8E-100 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 PIRSF PIRSF000535 2 311 1.6E-116 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DDI_RS07745 b7dac7cd7b0748d266335351dd705b67 312 SUPERFAMILY SSF53613 7 291 6.39E-67 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.778 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 Gene3D G3DSA:1.10.287.180 3 76 6.2E-33 T 28-03-2018 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 SUPERFAMILY SSF46557 2 76 1.44E-29 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 5.2E-29 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 5.5E-32 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.7E-60 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 Gene3D G3DSA:3.10.50.30 77 158 6.0E-28 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 SUPERFAMILY SSF54534 82 157 2.88E-24 T 28-03-2018 DDI_RS02090 5369c42db03f5edc30f46ccfd3dc09cd 158 PIRSF PIRSF006092 1 158 1.8E-55 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DDI_RS01985 70e576ac020566ee533423b4b8e43c59 177 Pfam PF06995 Phage P2 GpU 15 133 4.1E-46 T 28-03-2018 IPR009734 Myoviridae, GpU DDI_RS01985 70e576ac020566ee533423b4b8e43c59 177 Gene3D G3DSA:1.20.120.20 58 177 1.5E-5 T 28-03-2018 DDI_RS01985 70e576ac020566ee533423b4b8e43c59 177 PIRSF PIRSF029208 7 166 1.8E-59 T 28-03-2018 IPR016912 Bacteriophage P2, GpU DDI_RS07420 97efd71c6385356030a2270da99c9aa7 294 Gene3D G3DSA:3.30.1360.40 1 87 1.2E-14 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 DDI_RS07420 97efd71c6385356030a2270da99c9aa7 294 SUPERFAMILY SSF50891 93 249 9.86E-26 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS07420 97efd71c6385356030a2270da99c9aa7 294 SMART SM00796 6 223 9.7E-73 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DDI_RS07420 97efd71c6385356030a2270da99c9aa7 294 SUPERFAMILY SSF160467 7 97 1.7E-14 T 28-03-2018 DDI_RS07420 97efd71c6385356030a2270da99c9aa7 294 Gene3D G3DSA:2.40.100.10 91 251 1.8E-38 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS07420 97efd71c6385356030a2270da99c9aa7 294 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 221 4.3E-48 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DDI_RS20240 5a31e4ddc29e4a623d9f42cafdda1355 552 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 9 237 1.2E-40 T 28-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 DDI_RS20240 5a31e4ddc29e4a623d9f42cafdda1355 552 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 552 41.988 T 28-03-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 DDI_RS15770 7071e0f46357a91f6301423aef1dac07 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.5E-37 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type DDI_RS15770 7071e0f46357a91f6301423aef1dac07 141 SUPERFAMILY SSF46785 2 130 2.78E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15770 7071e0f46357a91f6301423aef1dac07 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 43.928 T 28-03-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 DDI_RS15770 7071e0f46357a91f6301423aef1dac07 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DDI_RS15770 7071e0f46357a91f6301423aef1dac07 141 Pfam PF02082 Transcriptional regulator 2 82 1.7E-24 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type DDI_RS15770 7071e0f46357a91f6301423aef1dac07 141 Gene3D G3DSA:1.10.10.10 1 133 1.2E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21315 ff3ea8b4704476ea64965742825de83a 105 SMART SM00418 22 100 1.7E-23 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS21315 ff3ea8b4704476ea64965742825de83a 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 9.2E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS21315 ff3ea8b4704476ea64965742825de83a 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 9.2E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS21315 ff3ea8b4704476ea64965742825de83a 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 9.2E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS21315 ff3ea8b4704476ea64965742825de83a 105 Gene3D G3DSA:1.10.10.10 2 102 3.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21315 ff3ea8b4704476ea64965742825de83a 105 Pfam PF01022 Bacterial regulatory protein, arsR family 30 73 4.4E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDI_RS21315 ff3ea8b4704476ea64965742825de83a 105 SUPERFAMILY SSF46785 11 103 1.16E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16485 e03df53d1d62c73df72cff26e7029bbd 436 SUPERFAMILY SSF53850 27 421 9.13E-43 T 28-03-2018 DDI_RS16485 e03df53d1d62c73df72cff26e7029bbd 436 Gene3D G3DSA:3.40.190.10 142 347 1.6E-33 T 28-03-2018 DDI_RS16485 e03df53d1d62c73df72cff26e7029bbd 436 Pfam PF13416 Bacterial extracellular solute-binding protein 49 335 3.6E-25 T 28-03-2018 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 Gene3D G3DSA:2.40.50.140 49 116 6.0E-32 T 28-03-2018 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 SUPERFAMILY SSF68912 1 46 2.0E-12 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 SMART SM00382 170 355 5.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS18855 b468867ab707c09047d442403e786f0f 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS18855 b468867ab707c09047d442403e786f0f 419 Gene3D G3DSA:1.10.720.10 1 43 1.9E-13 T 28-03-2018 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.5E-222 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.1E-23 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.3E-17 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 SUPERFAMILY SSF52540 90 371 1.87E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18855 b468867ab707c09047d442403e786f0f 419 SMART SM00357 52 118 9.6E-19 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.7E-32 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.877 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 SMART SM00959 5 47 6.9E-18 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DDI_RS18855 b468867ab707c09047d442403e786f0f 419 Gene3D G3DSA:3.40.50.300 129 419 6.9E-58 T 28-03-2018 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 SMART SM01002 146 311 9.9E-85 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 SMART SM01003 4 137 2.6E-73 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 28-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 510 7.0E-286 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 509 1.2E-35 T 28-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 Gene3D G3DSA:3.40.50.720 196 377 7.7E-58 T 28-03-2018 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 Gene3D G3DSA:3.40.50.720 1 195 1.7E-50 T 28-03-2018 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 7.3E-51 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 7.4E-75 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 SUPERFAMILY SSF52283 1 168 1.62E-56 T 28-03-2018 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 PIRSF PIRSF000203 1 509 6.7E-276 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DDI_RS09585 83377a0a5b350d1af2a7337a47702a6b 510 SUPERFAMILY SSF51735 137 317 2.24E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05955 832a42898404e3f02e22dd3073f1f0f3 326 Pfam PF13379 NMT1-like family 15 260 3.8E-40 T 28-03-2018 DDI_RS05955 832a42898404e3f02e22dd3073f1f0f3 326 Gene3D G3DSA:3.40.190.10 148 324 9.1E-22 T 28-03-2018 DDI_RS05955 832a42898404e3f02e22dd3073f1f0f3 326 Gene3D G3DSA:3.40.190.10 15 129 5.5E-11 T 28-03-2018 DDI_RS05955 832a42898404e3f02e22dd3073f1f0f3 326 SUPERFAMILY SSF53850 27 262 7.06E-32 T 28-03-2018 DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 SUPERFAMILY SSF52540 17 255 6.46E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 Gene3D G3DSA:2.40.50.140 296 366 4.4E-7 T 28-03-2018 DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 Pfam PF08402 TOBE domain 293 373 5.5E-21 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 SMART SM00382 42 225 2.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 SUPERFAMILY SSF50331 251 373 1.67E-17 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 Gene3D G3DSA:3.40.50.300 13 261 1.6E-76 T 28-03-2018 DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 Pfam PF00005 ABC transporter 34 175 2.9E-38 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07975 b25262b2deef26a163615254f3bbeb5e 375 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 373 2.2E-146 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 SUPERFAMILY SSF56059 123 313 7.07E-58 T 28-03-2018 DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 2.8E-46 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 Gene3D G3DSA:3.30.1490.20 138 190 2.3E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.9E-79 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 SUPERFAMILY SSF52440 2 122 4.89E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 Gene3D G3DSA:3.30.470.20 191 300 2.2E-16 T 28-03-2018 DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 180.344 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 Gene3D G3DSA:3.40.50.20 2 129 5.8E-51 T 28-03-2018 DDI_RS17225 5bfa002beff2d498f3d4c1a941a7d2e8 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 5.8E-138 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 SUPERFAMILY SSF51735 4 243 5.1E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.8E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.8E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.8E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 Pfam PF00106 short chain dehydrogenase 6 188 4.6E-51 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 Gene3D G3DSA:3.40.50.720 3 250 2.7E-59 T 28-03-2018 DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS06550 2e466a2d07f9a2ec811b93002a2fce2f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS18255 9cdbb49b09360b6a7e1628080d853e32 76 PIRSF PIRSF006169 1 75 3.9E-37 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 DDI_RS18255 9cdbb49b09360b6a7e1628080d853e32 76 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 5.0E-26 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 DDI_RS18255 9cdbb49b09360b6a7e1628080d853e32 76 SUPERFAMILY SSF118001 1 71 1.44E-28 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 DDI_RS18255 9cdbb49b09360b6a7e1628080d853e32 76 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 4.9E-35 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 DDI_RS18255 9cdbb49b09360b6a7e1628080d853e32 76 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.23 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 DDI_RS18255 9cdbb49b09360b6a7e1628080d853e32 76 Gene3D G3DSA:1.10.10.610 1 71 3.6E-35 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 Gene3D G3DSA:2.60.120.10 24 165 4.7E-19 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 3.0E-16 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 SUPERFAMILY SSF51206 23 162 1.96E-31 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 SMART SM00419 187 235 2.8E-13 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 Gene3D G3DSA:1.10.10.10 166 250 3.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 SMART SM00100 30 151 1.5E-21 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 SUPERFAMILY SSF46785 165 244 6.98E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09570 e4fb7b9ddb1f3c10086bd530cf15ebcc 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.2E-15 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 253 309 1.2E-19 T 28-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 249 8.4E-24 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 SUPERFAMILY SSF55120 10 248 4.89E-82 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.597 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 3.9E-56 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 SUPERFAMILY SSF88697 251 310 2.29E-13 T 28-03-2018 IPR015947 PUA-like domain DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 Gene3D G3DSA:3.30.2350.10 10 229 8.1E-80 T 28-03-2018 DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 Gene3D G3DSA:2.30.130.10 250 313 6.4E-15 T 28-03-2018 IPR002478 PUA domain GO:0003723 DDI_RS02155 0022f3039c57cd087ef572bd6f9fc7d9 318 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 2.3E-88 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 SUPERFAMILY SSF69593 3 173 7.45E-21 T 28-03-2018 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 719 50.656 T 28-03-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 Gene3D G3DSA:3.30.300.30 619 717 2.0E-10 T 28-03-2018 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 ProSitePatterns PS00455 Putative AMP-binding domain signature. 372 383 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 SMART SM00563 30 142 3.9E-25 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 Gene3D G3DSA:3.40.1130.10 1 209 1.4E-23 T 28-03-2018 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 Pfam PF01553 Acyltransferase 15 139 2.1E-14 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 Pfam PF00501 AMP-binding enzyme 235 621 2.2E-66 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 Gene3D G3DSA:3.40.50.980 210 377 8.0E-23 T 28-03-2018 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 Gene3D G3DSA:3.40.50.980 378 526 1.3E-45 T 28-03-2018 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 SUPERFAMILY SSF56801 205 716 1.11E-99 T 28-03-2018 DDI_RS15840 b1562de856e8d704e4559c4de58186db 732 Gene3D G3DSA:2.30.38.10 527 614 3.2E-12 T 28-03-2018 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 SMART SM00878 338 444 1.3E-53 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 Gene3D G3DSA:3.30.1490.20 127 211 4.4E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 Pfam PF02785 Biotin carboxylase C-terminal domain 338 444 4.8E-36 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 SUPERFAMILY SSF56059 86 350 2.47E-68 T 28-03-2018 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 1.8E-41 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 SUPERFAMILY SSF52440 3 116 1.22E-43 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 Gene3D G3DSA:3.40.50.20 4 126 5.3E-49 T 28-03-2018 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 Gene3D G3DSA:3.30.470.20 212 447 9.9E-92 T 28-03-2018 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 3.8E-70 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDI_RS07415 32ff4fc017b6cd38fbce552ce238403e 461 SUPERFAMILY SSF51246 333 448 2.35E-38 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDI_RS01430 e2e0f3bb3a732a20071d3af583bd2fe3 340 Gene3D G3DSA:3.40.50.2300 68 186 7.1E-26 T 28-03-2018 DDI_RS01430 e2e0f3bb3a732a20071d3af583bd2fe3 340 SUPERFAMILY SSF47413 15 73 1.45E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS01430 e2e0f3bb3a732a20071d3af583bd2fe3 340 SUPERFAMILY SSF53822 72 324 6.34E-52 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS01430 e2e0f3bb3a732a20071d3af583bd2fe3 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 1.0E-14 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS01430 e2e0f3bb3a732a20071d3af583bd2fe3 340 SMART SM00354 15 85 2.7E-24 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS01430 e2e0f3bb3a732a20071d3af583bd2fe3 340 Pfam PF13377 Periplasmic binding protein-like domain 183 339 3.0E-26 T 28-03-2018 DDI_RS01430 e2e0f3bb3a732a20071d3af583bd2fe3 340 Gene3D G3DSA:3.40.50.2300 187 329 2.2E-30 T 28-03-2018 DDI_RS01430 e2e0f3bb3a732a20071d3af583bd2fe3 340 Gene3D G3DSA:1.10.260.40 17 67 2.3E-18 T 28-03-2018 DDI_RS14595 7069c5a6aef2898ac92c98e11e719c30 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 1.3E-146 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DDI_RS14595 7069c5a6aef2898ac92c98e11e719c30 264 SUPERFAMILY SSF56276 112 173 1.29E-22 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 DDI_RS14595 7069c5a6aef2898ac92c98e11e719c30 264 SUPERFAMILY SSF56276 43 84 1.29E-22 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 DDI_RS14595 7069c5a6aef2898ac92c98e11e719c30 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 175.561 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DDI_RS14595 7069c5a6aef2898ac92c98e11e719c30 264 Gene3D G3DSA:3.60.90.10 32 189 1.9E-44 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 DDI_RS14595 7069c5a6aef2898ac92c98e11e719c30 264 PIRSF PIRSF001356 1 263 9.6E-155 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DDI_RS14595 7069c5a6aef2898ac92c98e11e719c30 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 3.6E-29 T 28-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DDI_RS00020 76669f3e1cf9162e2302b7f78bccbcb0 341 SMART SM00062 36 265 2.3E-55 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS00020 76669f3e1cf9162e2302b7f78bccbcb0 341 Gene3D G3DSA:3.40.190.10 4 146 2.4E-23 T 28-03-2018 DDI_RS00020 76669f3e1cf9162e2302b7f78bccbcb0 341 Gene3D G3DSA:3.40.190.10 147 224 1.6E-11 T 28-03-2018 DDI_RS00020 76669f3e1cf9162e2302b7f78bccbcb0 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS00020 76669f3e1cf9162e2302b7f78bccbcb0 341 SUPERFAMILY SSF53850 27 258 9.72E-50 T 28-03-2018 DDI_RS00020 76669f3e1cf9162e2302b7f78bccbcb0 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 7.7E-33 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 Hamap MF_00318 Enolase [eno]. 2 416 44.032 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 ProSitePatterns PS00164 Enolase signature. 339 352 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 Gene3D G3DSA:3.30.390.10 3 127 1.2E-50 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 SUPERFAMILY SSF54826 3 138 1.62E-55 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 SMART SM01192 143 430 1.4E-212 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 Gene3D G3DSA:3.20.20.120 128 431 3.7E-102 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 4.1E-139 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 PRINTS PR00148 Enolase signature 339 353 2.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 PRINTS PR00148 Enolase signature 107 123 2.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 PRINTS PR00148 Enolase signature 368 385 2.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 PRINTS PR00148 Enolase signature 37 51 2.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 PRINTS PR00148 Enolase signature 165 178 2.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 PRINTS PR00148 Enolase signature 316 327 2.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 Pfam PF03952 Enolase, N-terminal domain 4 134 2.2E-57 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 SUPERFAMILY SSF51604 143 427 4.1E-127 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 6.3E-204 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 PIRSF PIRSF001400 1 430 1.8E-190 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15500 75c8a8b7a1a960502c2b97817bf4d04c 432 SMART SM01193 4 134 1.8E-92 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS01865 88e674ced8f108805859254dc4940e3b 354 Pfam PF04860 Phage portal protein 95 322 4.6E-14 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein DDI_RS01865 88e674ced8f108805859254dc4940e3b 354 PIRSF PIRSF018494 1 347 2.9E-150 T 28-03-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria DDI_RS01865 88e674ced8f108805859254dc4940e3b 354 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 329 5.5E-94 T 28-03-2018 IPR006430 Phage portal protein PBSX family DDI_RS16945 1399f453797b888aa56ecb4d0bc394d0 125 SUPERFAMILY SSF110069 6 125 1.44E-47 T 28-03-2018 IPR007474 ApaG domain DDI_RS16945 1399f453797b888aa56ecb4d0bc394d0 125 Gene3D G3DSA:2.60.40.1470 4 125 9.1E-44 T 28-03-2018 IPR007474 ApaG domain DDI_RS16945 1399f453797b888aa56ecb4d0bc394d0 125 Pfam PF04379 ApaG domain 18 102 7.3E-35 T 28-03-2018 IPR007474 ApaG domain DDI_RS16945 1399f453797b888aa56ecb4d0bc394d0 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.962 T 28-03-2018 IPR023065 Uncharacterised protein family ApaG DDI_RS03240 dc8124168b839651349f6f35e7f5e0bb 576 Pfam PF14683 Polysaccharide lyase family 4, domain III 415 571 7.0E-29 T 28-03-2018 IPR029411 Rhamnogalacturonan lyase, domain III DDI_RS03240 dc8124168b839651349f6f35e7f5e0bb 576 Gene3D G3DSA:2.60.40.1120 316 409 7.0E-11 T 28-03-2018 DDI_RS03240 dc8124168b839651349f6f35e7f5e0bb 576 SUPERFAMILY SSF74650 118 312 4.08E-11 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS03240 dc8124168b839651349f6f35e7f5e0bb 576 Gene3D G3DSA:2.70.98.10 26 301 6.1E-46 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDI_RS03240 dc8124168b839651349f6f35e7f5e0bb 576 Pfam PF14686 Polysaccharide lyase family 4, domain II 331 401 9.2E-12 T 28-03-2018 IPR029413 Rhamnogalacturonan lyase, domain II DDI_RS03240 dc8124168b839651349f6f35e7f5e0bb 576 SUPERFAMILY SSF49452 319 401 2.55E-9 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 DDI_RS03240 dc8124168b839651349f6f35e7f5e0bb 576 SUPERFAMILY SSF49785 413 572 4.85E-27 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS03240 dc8124168b839651349f6f35e7f5e0bb 576 Gene3D G3DSA:2.60.120.260 410 573 1.2E-34 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 Pfam PF00413 Matrixin 103 201 1.2E-7 T 28-03-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 Gene3D G3DSA:2.150.10.10 256 479 3.9E-54 T 28-03-2018 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 SUPERFAMILY SSF55486 21 259 1.51E-73 T 28-03-2018 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 Pfam PF08548 Peptidase M10 serralysin C terminal 261 478 8.4E-83 T 28-03-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 369 387 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 SUPERFAMILY SSF51120 260 478 2.88E-51 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 PRINTS PR00313 NodO calcium binding signature 373 381 2.6E-12 T 28-03-2018 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 PRINTS PR00313 NodO calcium binding signature 382 391 2.6E-12 T 28-03-2018 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 PRINTS PR00313 NodO calcium binding signature 343 354 2.6E-12 T 28-03-2018 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 PRINTS PR00313 NodO calcium binding signature 364 372 2.6E-12 T 28-03-2018 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 Gene3D G3DSA:3.40.390.10 36 255 3.9E-36 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 PIRSF PIRSF001205 2 480 3.8E-219 T 28-03-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 DDI_RS09405 986ad665ad13a68feb978ef74e4ffeba 480 SMART SM00235 60 245 5.6E-26 T 28-03-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 DDI_RS16035 254dc51bf709a9fe2ced87e1567313b7 286 Gene3D G3DSA:4.10.1070.10 172 278 1.5E-15 T 28-03-2018 DDI_RS16035 254dc51bf709a9fe2ced87e1567313b7 286 Pfam PF07484 Phage Tail Collar Domain 127 174 1.7E-13 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS16035 254dc51bf709a9fe2ced87e1567313b7 286 Gene3D G3DSA:3.90.1340.10 114 171 7.2E-18 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS16035 254dc51bf709a9fe2ced87e1567313b7 286 SUPERFAMILY SSF88874 119 285 3.27E-34 T 28-03-2018 DDI_RS21355 49c6db407ebfca5c0d2972ff57471b83 179 Pfam PF12724 Flavodoxin domain 4 151 2.2E-53 T 28-03-2018 IPR026816 Flavodoxin domain DDI_RS21355 49c6db407ebfca5c0d2972ff57471b83 179 Gene3D G3DSA:3.40.50.360 2 173 1.3E-19 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS21355 49c6db407ebfca5c0d2972ff57471b83 179 SUPERFAMILY SSF52218 1 171 9.78E-33 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS21355 49c6db407ebfca5c0d2972ff57471b83 179 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DDI_RS03380 a71c5f6effd26478b3d643c970dc97bc 339 SMART SM00829 15 335 3.5E-33 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DDI_RS03380 a71c5f6effd26478b3d643c970dc97bc 339 SUPERFAMILY SSF51735 122 267 2.76E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS03380 a71c5f6effd26478b3d643c970dc97bc 339 Gene3D G3DSA:3.40.50.720 148 242 1.9E-21 T 28-03-2018 DDI_RS03380 a71c5f6effd26478b3d643c970dc97bc 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 95 5.2E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DDI_RS03380 a71c5f6effd26478b3d643c970dc97bc 339 Gene3D G3DSA:3.90.180.10 1 147 1.6E-38 T 28-03-2018 DDI_RS03380 a71c5f6effd26478b3d643c970dc97bc 339 Gene3D G3DSA:3.90.180.10 243 339 3.4E-6 T 28-03-2018 DDI_RS03380 a71c5f6effd26478b3d643c970dc97bc 339 Pfam PF13602 Zinc-binding dehydrogenase 192 335 1.5E-31 T 28-03-2018 DDI_RS03380 a71c5f6effd26478b3d643c970dc97bc 339 SUPERFAMILY SSF50129 3 155 7.15E-35 T 28-03-2018 IPR011032 GroES-like DDI_RS14860 aac312074dc10139a138deb02d40280b 195 Gene3D G3DSA:1.25.40.20 124 191 6.6E-18 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain DDI_RS14860 aac312074dc10139a138deb02d40280b 195 Pfam PF12796 Ankyrin repeats (3 copies) 55 142 3.4E-14 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain DDI_RS14860 aac312074dc10139a138deb02d40280b 195 SUPERFAMILY SSF48403 48 180 6.84E-36 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain DDI_RS14860 aac312074dc10139a138deb02d40280b 195 Gene3D G3DSA:1.25.40.20 29 123 5.4E-25 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain DDI_RS14860 aac312074dc10139a138deb02d40280b 195 SMART SM00248 48 77 1000.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 DDI_RS14860 aac312074dc10139a138deb02d40280b 195 SMART SM00248 114 143 0.12 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 DDI_RS14860 aac312074dc10139a138deb02d40280b 195 SMART SM00248 81 110 3.7E-5 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 DDI_RS14860 aac312074dc10139a138deb02d40280b 195 SMART SM00248 147 176 0.18 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 DDI_RS14860 aac312074dc10139a138deb02d40280b 195 Pfam PF00023 Ankyrin repeat 148 178 0.028 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 DDI_RS06600 5074cdc3b5851522f27b67de34a8cb81 588 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 587 3.5E-200 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like DDI_RS06600 5074cdc3b5851522f27b67de34a8cb81 588 Pfam PF05947 Type VI secretion system, TssF 5 585 1.9E-193 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like DDI_RS06600 5074cdc3b5851522f27b67de34a8cb81 588 PIRSF PIRSF028304 1 588 5.1E-182 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 Gene3D G3DSA:2.60.40.1180 624 682 2.3E-7 T 28-03-2018 DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 Pfam PF08533 Beta-galactosidase C-terminal domain 627 682 8.5E-9 T 28-03-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 PIRSF PIRSF001084 6 683 2.2E-245 T 28-03-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 Gene3D G3DSA:3.20.20.80 13 383 5.8E-86 T 28-03-2018 DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 Gene3D G3DSA:3.40.50.880 400 619 7.3E-62 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 SUPERFAMILY SSF51445 5 372 1.69E-113 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 Pfam PF02449 Beta-galactosidase 19 392 1.5E-155 T 28-03-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 Pfam PF08532 Beta-galactosidase trimerisation domain 403 615 1.7E-73 T 28-03-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDI_RS13245 91bb545292ed1919ff6d38ed5638f5ba 685 SUPERFAMILY SSF52317 400 615 2.52E-61 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS04215 23efac4e3fbb9090823b51c39045de4e 163 Gene3D G3DSA:3.30.70.860 98 162 1.9E-34 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain DDI_RS04215 23efac4e3fbb9090823b51c39045de4e 163 Gene3D G3DSA:3.30.70.990 10 97 1.7E-30 T 28-03-2018 IPR035570 UPF0234 N-terminal domain DDI_RS04215 23efac4e3fbb9090823b51c39045de4e 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.4E-65 T 28-03-2018 IPR007551 Protein of unknown function DUF520 DDI_RS04215 23efac4e3fbb9090823b51c39045de4e 163 SUPERFAMILY SSF89963 2 89 5.75E-30 T 28-03-2018 IPR007551 Protein of unknown function DUF520 DDI_RS04215 23efac4e3fbb9090823b51c39045de4e 163 SUPERFAMILY SSF89963 91 163 2.38E-29 T 28-03-2018 IPR007551 Protein of unknown function DUF520 DDI_RS04215 23efac4e3fbb9090823b51c39045de4e 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 29.783 T 28-03-2018 IPR007551 Protein of unknown function DUF520 DDI_RS11765 7b9b71f90414031ec9a6aaa38d7af7c9 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 4.8E-29 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDI_RS11765 7b9b71f90414031ec9a6aaa38d7af7c9 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 8.9E-37 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDI_RS11765 7b9b71f90414031ec9a6aaa38d7af7c9 316 Gene3D G3DSA:3.40.47.10 2 162 8.8E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS11765 7b9b71f90414031ec9a6aaa38d7af7c9 316 SUPERFAMILY SSF53901 3 316 4.29E-70 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS11765 7b9b71f90414031ec9a6aaa38d7af7c9 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 1.1E-140 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDI_RS11765 7b9b71f90414031ec9a6aaa38d7af7c9 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 69.57 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDI_RS11765 7b9b71f90414031ec9a6aaa38d7af7c9 316 Gene3D G3DSA:3.40.47.10 163 316 3.7E-42 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS04760 682397a105f819e4bc1286570a6a8871 62 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 2.7E-36 T 28-03-2018 IPR020910 Uncharacterised protein family UPF0370 DDI_RS04760 682397a105f819e4bc1286570a6a8871 62 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 62 26.304 T 28-03-2018 IPR020910 Uncharacterised protein family UPF0370 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 SMART SM00283 267 514 3.9E-85 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 Pfam PF02203 Tar ligand binding domain homologue 4 169 6.8E-12 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 482 1.2E-46 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 SUPERFAMILY SSF58104 238 519 1.01E-67 T 28-03-2018 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 SMART SM00304 214 266 0.0016 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 4.0E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 4.0E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 4.0E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 4.0E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 4.0E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 Gene3D G3DSA:1.10.287.950 323 518 2.1E-47 T 28-03-2018 DDI_RS07850 1b5238fcbd074e67c3782123a872dcbc 541 Gene3D G3DSA:1.10.287.950 39 322 8.3E-21 T 28-03-2018 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 SUPERFAMILY SSF46689 4 98 1.05E-26 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 PIRSF PIRSF002097 1 98 8.1E-46 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 Gene3D G3DSA:1.10.10.60 1 98 9.0E-27 T 28-03-2018 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.307 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 1.5E-34 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 1.5E-34 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 1.5E-34 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDI_RS00070 d6db4c6702c997d1a723425e45d306ee 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 1.5E-34 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 SUPERFAMILY SSF46785 4 76 1.57E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 Gene3D G3DSA:1.20.120.530 87 238 2.1E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 Gene3D G3DSA:1.10.10.10 2 74 4.9E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 3.4E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 SUPERFAMILY SSF48008 95 228 7.06E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 SMART SM00345 13 72 2.6E-26 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 Pfam PF07729 FCD domain 97 220 2.8E-19 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 SMART SM00895 97 221 2.5E-16 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 4.9E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS01640 21e316b44f4f61b96f4e26a4691f5538 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 4.9E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS01320 cefdaeaecd0c165955d9fccba7cfd886 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 6.8E-9 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS01320 cefdaeaecd0c165955d9fccba7cfd886 226 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDI_RS01320 cefdaeaecd0c165955d9fccba7cfd886 226 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 9 211 3.2E-78 T 28-03-2018 IPR017694 Phosphonate metabolim protein, transferase hexapeptide repeat family DDI_RS01320 cefdaeaecd0c165955d9fccba7cfd886 226 Gene3D G3DSA:2.160.10.10 13 207 3.1E-41 T 28-03-2018 DDI_RS01320 cefdaeaecd0c165955d9fccba7cfd886 226 SUPERFAMILY SSF51161 5 209 2.22E-41 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 656 4.8E-269 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 6.8E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 6.8E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 6.8E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 6.8E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 6.8E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 Gene3D G3DSA:2.40.37.10 422 604 2.7E-63 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 Gene3D G3DSA:2.40.37.10 22 104 7.4E-13 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 367 9.3E-69 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 Gene3D G3DSA:3.20.20.10 105 367 2.4E-41 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 SUPERFAMILY SSF50621 482 587 1.6E-8 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PIRSF PIRSF001336 15 658 2.4E-252 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 SUPERFAMILY SSF51419 92 369 3.36E-68 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 42.719 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 5.3E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DDI_RS17195 6a6ed9630bb1857b6227e4e64ca0ed2f 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.261 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 Pfam PF01467 Cytidylyltransferase-like 6 134 1.1E-22 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 60 2.1E-17 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 Gene3D G3DSA:3.40.50.620 1 159 1.8E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.4E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.4E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.4E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.4E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.4E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 SUPERFAMILY SSF52374 2 157 4.56E-47 T 28-03-2018 DDI_RS21105 a22a7b5c76a35e436a52d21700458b1b 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 3.3E-60 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDI_RS14475 e81b8543e2b353de385713994bd766e0 260 Gene3D G3DSA:3.40.50.1980 13 133 9.0E-32 T 28-03-2018 DDI_RS14475 e81b8543e2b353de385713994bd766e0 260 Gene3D G3DSA:3.40.50.1980 134 258 3.6E-22 T 28-03-2018 DDI_RS14475 e81b8543e2b353de385713994bd766e0 260 SUPERFAMILY SSF53807 15 255 1.53E-59 T 28-03-2018 DDI_RS14475 e81b8543e2b353de385713994bd766e0 260 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 259 46.888 T 28-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 DDI_RS14475 e81b8543e2b353de385713994bd766e0 260 Pfam PF01497 Periplasmic binding protein 17 213 4.3E-23 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 DDI_RS19180 bd7f0f0824ae0b0f2e6eafb5bbbcd2ec 156 Pfam PF13239 2TM domain 76 153 6.7E-16 T 28-03-2018 IPR025698 2TM domain DDI_RS19180 bd7f0f0824ae0b0f2e6eafb5bbbcd2ec 156 SMART SM00530 3 57 3.6E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS19180 bd7f0f0824ae0b0f2e6eafb5bbbcd2ec 156 Pfam PF01381 Helix-turn-helix 4 55 1.6E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS19180 bd7f0f0824ae0b0f2e6eafb5bbbcd2ec 156 SUPERFAMILY SSF47413 2 63 4.29E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS19180 bd7f0f0824ae0b0f2e6eafb5bbbcd2ec 156 Gene3D G3DSA:1.10.260.40 1 91 4.5E-17 T 28-03-2018 DDI_RS07950 723982796391bdadbe7cd5632a142a86 85 PRINTS PR00160 Glutaredoxin signature 3 21 1.6E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup DDI_RS07950 723982796391bdadbe7cd5632a142a86 85 PRINTS PR00160 Glutaredoxin signature 66 79 1.6E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup DDI_RS07950 723982796391bdadbe7cd5632a142a86 85 PRINTS PR00160 Glutaredoxin signature 52 65 1.6E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup DDI_RS07950 723982796391bdadbe7cd5632a142a86 85 Pfam PF00462 Glutaredoxin 4 69 9.4E-16 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DDI_RS07950 723982796391bdadbe7cd5632a142a86 85 SUPERFAMILY SSF52833 3 82 1.11E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS07950 723982796391bdadbe7cd5632a142a86 85 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 83 5.2E-50 T 28-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 DDI_RS07950 723982796391bdadbe7cd5632a142a86 85 Gene3D G3DSA:3.40.30.10 1 85 1.3E-20 T 28-03-2018 DDI_RS07950 723982796391bdadbe7cd5632a142a86 85 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DDI_RS21440 c0733c9198cc91c66d11cc899a603ae5 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS21440 c0733c9198cc91c66d11cc899a603ae5 234 Gene3D G3DSA:3.40.50.790 68 149 6.2E-35 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DDI_RS21440 c0733c9198cc91c66d11cc899a603ae5 234 Gene3D G3DSA:3.30.190.20 150 228 9.6E-22 T 28-03-2018 DDI_RS21440 c0733c9198cc91c66d11cc899a603ae5 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.3E-51 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DDI_RS21440 c0733c9198cc91c66d11cc899a603ae5 234 PIRSF PIRSF002155 1 227 1.0E-77 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS21440 c0733c9198cc91c66d11cc899a603ae5 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 7.4E-107 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DDI_RS21440 c0733c9198cc91c66d11cc899a603ae5 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.183 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DDI_RS21440 c0733c9198cc91c66d11cc899a603ae5 234 SUPERFAMILY SSF56808 6 225 2.75E-82 T 28-03-2018 IPR023674 Ribosomal protein L1-like DDI_RS18745 623da2e719ac15d378eb76aa64a73fdd 223 Gene3D G3DSA:1.10.3720.10 2 223 8.7E-46 T 28-03-2018 DDI_RS18745 623da2e719ac15d378eb76aa64a73fdd 223 SUPERFAMILY SSF161098 13 209 7.85E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS18745 623da2e719ac15d378eb76aa64a73fdd 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 112 1.9E-26 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS18745 623da2e719ac15d378eb76aa64a73fdd 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 218 6.0E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01170 7e6f76bdcdf9d5a72eba97effbad03a6 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 449 7.8E-85 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS01170 7e6f76bdcdf9d5a72eba97effbad03a6 542 Gene3D G3DSA:3.10.105.10 307 511 2.0E-44 T 28-03-2018 DDI_RS01170 7e6f76bdcdf9d5a72eba97effbad03a6 542 Gene3D G3DSA:3.40.190.10 165 306 1.2E-36 T 28-03-2018 DDI_RS01170 7e6f76bdcdf9d5a72eba97effbad03a6 542 Gene3D G3DSA:3.90.76.10 68 164 1.7E-31 T 28-03-2018 DDI_RS01170 7e6f76bdcdf9d5a72eba97effbad03a6 542 SUPERFAMILY SSF53850 40 541 3.12E-122 T 28-03-2018 DDI_RS01170 7e6f76bdcdf9d5a72eba97effbad03a6 542 PIRSF PIRSF002741 5 542 8.8E-88 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS07995 2cdf7f058ab678e7d08c25cbd3f15105 376 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site DDI_RS07995 2cdf7f058ab678e7d08c25cbd3f15105 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 79.343 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 DDI_RS07995 2cdf7f058ab678e7d08c25cbd3f15105 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 4.9E-197 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 DDI_RS07995 2cdf7f058ab678e7d08c25cbd3f15105 376 Gene3D G3DSA:3.40.50.150 1 373 1.4E-44 T 28-03-2018 DDI_RS07995 2cdf7f058ab678e7d08c25cbd3f15105 376 SUPERFAMILY SSF53335 3 374 1.33E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS07995 2cdf7f058ab678e7d08c25cbd3f15105 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site DDI_RS07995 2cdf7f058ab678e7d08c25cbd3f15105 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 2.6E-13 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 94 110 2.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 79 94 2.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 Pfam PF12833 Helix-turn-helix domain 35 111 1.5E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 Gene3D G3DSA:1.10.10.60 10 63 6.2E-13 T 28-03-2018 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 SMART SM00342 27 110 2.4E-32 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 SUPERFAMILY SSF46689 63 116 2.37E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 Gene3D G3DSA:1.10.10.60 64 125 2.4E-16 T 28-03-2018 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 Gene3D G3DSA:3.20.80.10 132 299 1.1E-7 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 SUPERFAMILY SSF46689 14 61 1.52E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS06785 555bf46dd09319e42dd4f073c99c4279 299 SUPERFAMILY SSF55136 169 295 4.19E-5 T 28-03-2018 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 Gene3D G3DSA:3.40.1500.10 1 302 9.1E-139 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 2.7E-131 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 PRINTS PR00073 Coprogen oxidase signature 90 114 3.2E-86 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 PRINTS PR00073 Coprogen oxidase signature 162 191 3.2E-86 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 PRINTS PR00073 Coprogen oxidase signature 125 147 3.2E-86 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 PRINTS PR00073 Coprogen oxidase signature 31 47 3.2E-86 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 PRINTS PR00073 Coprogen oxidase signature 48 69 3.2E-86 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 PRINTS PR00073 Coprogen oxidase signature 234 261 3.2E-86 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 PRINTS PR00073 Coprogen oxidase signature 262 288 3.2E-86 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 PIRSF PIRSF000166 2 303 1.8E-126 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.452 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 28-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS02970 62b9197ab8219ea569de55e54fa5924e 312 SUPERFAMILY SSF102886 4 302 3.01E-138 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 Gene3D G3DSA:1.10.1140.10 348 458 3.9E-46 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 SUPERFAMILY SSF50615 1 75 1.6E-24 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 Gene3D G3DSA:3.40.50.300 76 347 1.8E-89 T 28-03-2018 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 6.1E-63 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.8E-263 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 SUPERFAMILY SSF47917 345 459 4.19E-56 T 28-03-2018 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 SMART SM00382 142 405 8.1E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 SUPERFAMILY SSF52540 77 348 2.23E-89 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.929 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 Gene3D G3DSA:2.40.10.170 1 75 1.2E-30 T 28-03-2018 DDI_RS20015 94243bac0be586ac040ca0ba33d75e72 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 6.0E-21 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS13580 299956bdc6d32a2a1ec8d92d8ee0200f 215 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 208 7.0E-41 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 DDI_RS13580 299956bdc6d32a2a1ec8d92d8ee0200f 215 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 211 21.979 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 Gene3D G3DSA:3.40.50.1360 78 239 1.2E-30 T 28-03-2018 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 Pfam PF08220 DeoR-like helix-turn-helix domain 11 64 2.5E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 SUPERFAMILY SSF46785 9 64 5.89E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 SUPERFAMILY SSF100950 80 235 1.57E-21 T 28-03-2018 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 Gene3D G3DSA:1.10.10.10 4 77 5.9E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 SMART SM00420 11 63 1.5E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 SMART SM01134 76 237 1.7E-58 T 28-03-2018 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 2.5E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 2.5E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS10455 ed06b4f45f9dc871f09a1fa45f08823b 259 Pfam PF00455 DeoR C terminal sensor domain 79 235 3.1E-41 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain DDI_RS02170 8016b9079822ec5b93ef085707002c5c 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 DDI_RS02170 8016b9079822ec5b93ef085707002c5c 294 SUPERFAMILY SSF48452 27 283 2.98E-71 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS02170 8016b9079822ec5b93ef085707002c5c 294 Gene3D G3DSA:1.25.40.10 20 294 3.7E-48 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS02170 8016b9079822ec5b93ef085707002c5c 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.0066 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS02170 8016b9079822ec5b93ef085707002c5c 294 PIRSF PIRSF004654 1 292 2.9E-115 T 28-03-2018 IPR023605 Lipoprotein NlpI DDI_RS02170 8016b9079822ec5b93ef085707002c5c 294 SMART SM00028 96 129 2.0E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS02170 8016b9079822ec5b93ef085707002c5c 294 SMART SM00028 62 95 0.0037 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS15580 fa66687dbbd5954ffbef31c0cb14509e 118 Pfam PF14282 FlxA-like protein 9 110 2.4E-19 T 28-03-2018 IPR025577 FlxA-like protein DDI_RS15580 fa66687dbbd5954ffbef31c0cb14509e 118 Gene3D G3DSA:1.20.5.340 5 113 1.6E-6 T 28-03-2018 DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 SMART SM00382 31 236 1.6E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 SMART SM00382 348 522 1.3E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 Pfam PF00005 ABC transporter 340 473 6.4E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 Pfam PF00005 ABC transporter 22 191 3.4E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 SUPERFAMILY SSF52540 302 526 2.08E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 SUPERFAMILY SSF52540 11 243 7.52E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 Pfam PF12848 ABC transporter 230 306 2.4E-12 T 28-03-2018 IPR032781 ABC-transporter extension domain DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 5.4E-295 T 28-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 Gene3D G3DSA:3.40.50.300 290 552 2.6E-55 T 28-03-2018 DDI_RS17130 ac67bc179bf248e07acaec05ac7ba9f2 554 Gene3D G3DSA:3.40.50.300 12 289 6.4E-56 T 28-03-2018 DDI_RS14210 a390480e981776e9dac2684afacbc034 167 Gene3D G3DSA:3.40.140.10 2 162 2.5E-52 T 28-03-2018 DDI_RS14210 a390480e981776e9dac2684afacbc034 167 SUPERFAMILY SSF53927 4 154 1.84E-57 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDI_RS14210 a390480e981776e9dac2684afacbc034 167 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DDI_RS14210 a390480e981776e9dac2684afacbc034 167 Pfam PF14437 MafB19-like deaminase 5 152 1.8E-33 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DDI_RS14210 a390480e981776e9dac2684afacbc034 167 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 48.118 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 244 2.1E-61 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 PIRSF PIRSF000398 1 269 2.0E-63 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 Gene3D G3DSA:1.10.1020.10 57 138 3.8E-29 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.7E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.7E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.7E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.7E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 SUPERFAMILY SSF53335 6 267 4.54E-68 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 266 4.3E-83 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDI_RS01830 bcf71d55a38f1bfa185a7ae8ad989233 278 Gene3D G3DSA:3.40.50.150 139 269 9.1E-22 T 28-03-2018 DDI_RS14370 a5b78db152afabef3ea9ef791b17ef0d 202 SUPERFAMILY SSF109604 2 152 4.92E-31 T 28-03-2018 DDI_RS14370 a5b78db152afabef3ea9ef791b17ef0d 202 Pfam PF13328 HD domain 7 93 3.5E-14 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS14370 a5b78db152afabef3ea9ef791b17ef0d 202 SMART SM00471 25 135 3.2E-5 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS04830 2204a7a3c5d0d5f94b1746d2492ad275 636 SUPERFAMILY SSF56519 57 254 1.16E-53 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DDI_RS04830 2204a7a3c5d0d5f94b1746d2492ad275 636 SUPERFAMILY SSF56601 255 615 1.73E-90 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS04830 2204a7a3c5d0d5f94b1746d2492ad275 636 Gene3D G3DSA:3.90.1310.10 34 254 4.6E-56 T 28-03-2018 DDI_RS04830 2204a7a3c5d0d5f94b1746d2492ad275 636 Gene3D G3DSA:3.40.710.10 255 622 1.6E-81 T 28-03-2018 DDI_RS04830 2204a7a3c5d0d5f94b1746d2492ad275 636 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 615 3.2E-237 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 DDI_RS04830 2204a7a3c5d0d5f94b1746d2492ad275 636 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 612 3.7E-89 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DDI_RS04830 2204a7a3c5d0d5f94b1746d2492ad275 636 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 2.8E-47 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DDI_RS04450 3039bdc6dee71c8b9c6a0b402b11790b 330 Gene3D G3DSA:3.40.50.1400 183 310 5.1E-42 T 28-03-2018 DDI_RS04450 3039bdc6dee71c8b9c6a0b402b11790b 330 Pfam PF00762 Ferrochelatase 15 328 3.1E-108 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DDI_RS04450 3039bdc6dee71c8b9c6a0b402b11790b 330 Hamap MF_00323 Ferrochelatase [hemH]. 14 330 37.738 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DDI_RS04450 3039bdc6dee71c8b9c6a0b402b11790b 330 SUPERFAMILY SSF53800 13 328 1.42E-100 T 28-03-2018 DDI_RS04450 3039bdc6dee71c8b9c6a0b402b11790b 330 Gene3D G3DSA:3.40.50.1400 11 182 2.1E-47 T 28-03-2018 DDI_RS04450 3039bdc6dee71c8b9c6a0b402b11790b 330 ProSitePatterns PS00534 Ferrochelatase signature. 199 217 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DDI_RS04450 3039bdc6dee71c8b9c6a0b402b11790b 330 TIGRFAM TIGR00109 hemH: ferrochelatase 11 328 4.3E-108 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DDI_RS18775 58cbe0a50d5a30b8f5b2f73d35aec66b 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 258 3.4E-50 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS18775 58cbe0a50d5a30b8f5b2f73d35aec66b 269 Gene3D G3DSA:3.40.190.10 30 136 3.2E-24 T 28-03-2018 DDI_RS18775 58cbe0a50d5a30b8f5b2f73d35aec66b 269 SUPERFAMILY SSF53850 8 260 1.33E-54 T 28-03-2018 DDI_RS18775 58cbe0a50d5a30b8f5b2f73d35aec66b 269 Gene3D G3DSA:3.40.190.10 137 219 5.7E-17 T 28-03-2018 DDI_RS18775 58cbe0a50d5a30b8f5b2f73d35aec66b 269 SMART SM00062 37 260 2.9E-58 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS09025 a5d8cea0425aa44269cf0127d39b5a71 547 Gene3D G3DSA:3.90.76.10 65 177 3.6E-33 T 28-03-2018 DDI_RS09025 a5d8cea0425aa44269cf0127d39b5a71 547 PIRSF PIRSF002741 3 546 2.0E-110 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS09025 a5d8cea0425aa44269cf0127d39b5a71 547 Gene3D G3DSA:3.10.105.10 314 516 2.0E-53 T 28-03-2018 DDI_RS09025 a5d8cea0425aa44269cf0127d39b5a71 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 466 1.8E-84 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS09025 a5d8cea0425aa44269cf0127d39b5a71 547 Gene3D G3DSA:3.40.190.10 178 313 1.1E-36 T 28-03-2018 DDI_RS09025 a5d8cea0425aa44269cf0127d39b5a71 547 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 110 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site DDI_RS09025 a5d8cea0425aa44269cf0127d39b5a71 547 SUPERFAMILY SSF53850 37 529 3.53E-142 T 28-03-2018 DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 1.3E-223 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 SMART SM00829 13 370 1.9E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 Gene3D G3DSA:3.90.180.10 313 370 0.13 T 28-03-2018 DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 SUPERFAMILY SSF50129 3 190 5.48E-74 T 28-03-2018 IPR011032 GroES-like DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 131 5.8E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 SUPERFAMILY SSF50129 321 372 1.65E-12 T 28-03-2018 IPR011032 GroES-like DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 SUPERFAMILY SSF51735 163 337 2.24E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 Gene3D G3DSA:3.90.180.10 1 191 1.8E-63 T 28-03-2018 DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 Gene3D G3DSA:3.40.50.720 192 312 2.4E-25 T 28-03-2018 DDI_RS07835 07331255d426b76fd2fd81ad00e2dafb 373 Pfam PF00107 Zinc-binding dehydrogenase 200 324 2.5E-24 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 SUPERFAMILY SSF53187 292 373 1.39E-64 T 28-03-2018 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 SUPERFAMILY SSF53187 5 178 1.39E-64 T 28-03-2018 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 SUPERFAMILY SSF55031 179 288 4.78E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.978 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 1.5E-43 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.5E-178 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 Gene3D G3DSA:3.40.630.10 298 373 1.3E-4 T 28-03-2018 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 Gene3D G3DSA:3.40.630.10 1 280 2.9E-63 T 28-03-2018 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDI_RS04770 0ecccd84502c052652790dcc670bdb53 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.0E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS05520 444a26cae08beb3dbcd4a2dd43a0ade3 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 282 1.2E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05520 444a26cae08beb3dbcd4a2dd43a0ade3 284 Gene3D G3DSA:1.10.3720.10 13 274 4.9E-40 T 28-03-2018 DDI_RS05520 444a26cae08beb3dbcd4a2dd43a0ade3 284 SUPERFAMILY SSF161098 80 266 3.14E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05520 444a26cae08beb3dbcd4a2dd43a0ade3 284 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 61 1.3E-6 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS18470 2b12d4a7bed12ac493595fd09ee99cb3 569 Gene3D G3DSA:3.40.630.30 303 480 1.5E-21 T 28-03-2018 DDI_RS18470 2b12d4a7bed12ac493595fd09ee99cb3 569 Pfam PF13444 Acetyltransferase (GNAT) domain 322 422 7.9E-23 T 28-03-2018 DDI_RS18470 2b12d4a7bed12ac493595fd09ee99cb3 569 SUPERFAMILY SSF55729 307 470 9.0E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS18470 2b12d4a7bed12ac493595fd09ee99cb3 569 SMART SM00563 77 194 1.4E-7 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS18470 2b12d4a7bed12ac493595fd09ee99cb3 569 Gene3D G3DSA:3.40.1130.10 24 265 3.9E-36 T 28-03-2018 DDI_RS18470 2b12d4a7bed12ac493595fd09ee99cb3 569 SUPERFAMILY SSF69593 62 259 1.83E-15 T 28-03-2018 DDI_RS18470 2b12d4a7bed12ac493595fd09ee99cb3 569 Pfam PF01553 Acyltransferase 68 192 1.9E-11 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS07710 d6d43545f5d82f0d7dd454d83f39f4ca 603 Gene3D G3DSA:3.10.105.10 323 561 2.5E-39 T 28-03-2018 DDI_RS07710 d6d43545f5d82f0d7dd454d83f39f4ca 603 PIRSF PIRSF002741 1 594 5.7E-130 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS07710 d6d43545f5d82f0d7dd454d83f39f4ca 603 SUPERFAMILY SSF53850 52 591 2.17E-95 T 28-03-2018 DDI_RS07710 d6d43545f5d82f0d7dd454d83f39f4ca 603 Gene3D G3DSA:3.40.190.10 175 322 3.7E-30 T 28-03-2018 DDI_RS07710 d6d43545f5d82f0d7dd454d83f39f4ca 603 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 505 6.8E-65 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS07710 d6d43545f5d82f0d7dd454d83f39f4ca 603 Gene3D G3DSA:3.90.76.10 79 174 2.1E-14 T 28-03-2018 DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 3.0E-27 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 Gene3D G3DSA:1.20.5.710 2 50 1.5E-16 T 28-03-2018 DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 2.2E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 Gene3D G3DSA:3.30.1390.10 51 121 3.1E-31 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 4.9E-31 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 SUPERFAMILY SSF48300 3 57 8.5E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.469 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 SUPERFAMILY SSF54736 50 121 2.96E-25 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DDI_RS21450 4c0866cf4b5db87b49d73dd2cd180121 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 5.1E-48 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15505 b7bd0844e14f685f59d524d2d2c2a6b5 545 SUPERFAMILY SSF52317 289 541 1.99E-88 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS15505 b7bd0844e14f685f59d524d2d2c2a6b5 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 7.2E-63 T 28-03-2018 IPR017926 Glutamine amidotransferase DDI_RS15505 b7bd0844e14f685f59d524d2d2c2a6b5 545 Gene3D G3DSA:3.40.50.300 1 284 6.6E-129 T 28-03-2018 DDI_RS15505 b7bd0844e14f685f59d524d2d2c2a6b5 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.6E-265 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DDI_RS15505 b7bd0844e14f685f59d524d2d2c2a6b5 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.535 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DDI_RS15505 b7bd0844e14f685f59d524d2d2c2a6b5 545 SUPERFAMILY SSF52540 3 269 2.74E-122 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15505 b7bd0844e14f685f59d524d2d2c2a6b5 545 Gene3D G3DSA:3.40.50.880 286 543 3.3E-75 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS15505 b7bd0844e14f685f59d524d2d2c2a6b5 545 Pfam PF06418 CTP synthase N-terminus 5 266 4.8E-126 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DDI_RS17345 c4a2a15e3c854cd5c197cee1d6f143ac 399 SUPERFAMILY SSF53756 3 311 3.3E-13 T 28-03-2018 DDI_RS17345 c4a2a15e3c854cd5c197cee1d6f143ac 399 Gene3D G3DSA:3.40.50.2000 188 378 4.2E-11 T 28-03-2018 DDI_RS15240 c45f814041a7d313543914d26142fdea 600 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 42 594 2.3E-249 T 28-03-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 DDI_RS15240 c45f814041a7d313543914d26142fdea 600 Gene3D G3DSA:3.90.1300.10 6 454 8.7E-109 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS15240 c45f814041a7d313543914d26142fdea 600 Gene3D G3DSA:3.10.490.10 468 600 6.8E-28 T 28-03-2018 DDI_RS15240 c45f814041a7d313543914d26142fdea 600 Pfam PF01425 Amidase 43 437 1.8E-90 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS15240 c45f814041a7d313543914d26142fdea 600 SUPERFAMILY SSF75304 6 448 7.46E-110 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS14890 269f09801aaf276758f176f489d8c039 459 Gene3D G3DSA:3.40.605.10 5 241 1.8E-31 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS14890 269f09801aaf276758f176f489d8c039 459 Pfam PF00171 Aldehyde dehydrogenase family 11 413 3.0E-33 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS14890 269f09801aaf276758f176f489d8c039 459 SUPERFAMILY SSF53720 27 451 1.44E-64 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS14890 269f09801aaf276758f176f489d8c039 459 Gene3D G3DSA:3.40.309.10 242 417 5.9E-29 T 28-03-2018 DDI_RS14890 269f09801aaf276758f176f489d8c039 459 PIRSF PIRSF036410 9 459 2.4E-203 T 28-03-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 Pfam PF00406 Adenylate kinase 5 185 5.9E-61 T 28-03-2018 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 SUPERFAMILY SSF52540 1 214 4.22E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 3.7E-77 T 28-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 Gene3D G3DSA:3.40.50.300 1 215 3.8E-69 T 28-03-2018 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 PRINTS PR00094 Adenylate kinase signature 156 171 1.5E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 PRINTS PR00094 Adenylate kinase signature 173 187 1.5E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 PRINTS PR00094 Adenylate kinase signature 4 17 1.5E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 PRINTS PR00094 Adenylate kinase signature 32 46 1.5E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 PRINTS PR00094 Adenylate kinase signature 81 97 1.5E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 4.7E-16 T 28-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DDI_RS04445 5641fec45838adc47c8f5ee31df2c714 215 Hamap MF_00235 Adenylate kinase [adk]. 1 215 52.822 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 Pfam PF13377 Periplasmic binding protein-like domain 173 331 6.9E-31 T 28-03-2018 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 SMART SM00354 5 75 2.0E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 Gene3D G3DSA:3.40.50.2300 60 180 5.7E-19 T 28-03-2018 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 SUPERFAMILY SSF47413 5 63 3.49E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 7.2E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 Gene3D G3DSA:1.10.260.40 6 59 1.7E-20 T 28-03-2018 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 SUPERFAMILY SSF53822 62 325 9.42E-52 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS13230 b5a452ecb9ed75aba2656bca0706b27b 357 Gene3D G3DSA:3.40.50.2300 181 336 1.2E-38 T 28-03-2018 DDI_RS18705 2cb1713a4ede1fc8149f2d4dd78bafbc 106 Pfam PF01491 Frataxin-like domain 1 102 3.9E-30 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS18705 2cb1713a4ede1fc8149f2d4dd78bafbc 106 Gene3D G3DSA:3.30.920.10 1 106 9.8E-33 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS18705 2cb1713a4ede1fc8149f2d4dd78bafbc 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.236 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS18705 2cb1713a4ede1fc8149f2d4dd78bafbc 106 SUPERFAMILY SSF55387 1 105 4.53E-39 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS18705 2cb1713a4ede1fc8149f2d4dd78bafbc 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 28-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS18705 2cb1713a4ede1fc8149f2d4dd78bafbc 106 SMART SM01219 1 106 1.1E-56 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS18705 2cb1713a4ede1fc8149f2d4dd78bafbc 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 2.4E-43 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 Gene3D G3DSA:3.40.50.720 3 88 7.9E-4 T 28-03-2018 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 SUPERFAMILY SSF51905 312 374 1.41E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 SUPERFAMILY SSF51905 3 260 1.41E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 Pfam PF01266 FAD dependent oxidoreductase 5 358 5.1E-49 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 SUPERFAMILY SSF54373 226 319 1.26E-7 T 28-03-2018 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 481 1.4E-15 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 7.6E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 7.6E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 7.6E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 7.6E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 7.6E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 7.6E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 Gene3D G3DSA:3.30.9.10 89 182 1.3E-15 T 28-03-2018 DDI_RS18520 883c1202e87b2b23825758d6afc36b35 499 Gene3D G3DSA:3.30.9.10 183 320 1.2E-39 T 28-03-2018 DDI_RS20590 483984e5b0b5ceca53b38d2647cf47c0 236 Pfam PF11254 Protein of unknown function (DUF3053) 14 230 8.0E-87 T 28-03-2018 IPR021413 Protein of unknown function DUF3053 DDI_RS09575 dd77e33098be4bbef97dfd36f035567b 321 Gene3D G3DSA:3.40.50.620 157 303 1.7E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS09575 dd77e33098be4bbef97dfd36f035567b 321 SUPERFAMILY SSF52402 4 152 1.84E-25 T 28-03-2018 DDI_RS09575 dd77e33098be4bbef97dfd36f035567b 321 SUPERFAMILY SSF52402 157 307 6.78E-22 T 28-03-2018 DDI_RS09575 dd77e33098be4bbef97dfd36f035567b 321 Gene3D G3DSA:3.40.50.620 1 156 6.2E-19 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS09575 dd77e33098be4bbef97dfd36f035567b 321 Pfam PF00582 Universal stress protein family 180 300 4.3E-11 T 28-03-2018 IPR006016 UspA GO:0006950 DDI_RS09575 dd77e33098be4bbef97dfd36f035567b 321 Pfam PF00582 Universal stress protein family 4 146 2.2E-17 T 28-03-2018 IPR006016 UspA GO:0006950 DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 SMART SM00304 176 228 1.7E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 113 1.3E-7 T 28-03-2018 IPR029095 NarX-like, N-terminal DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 Gene3D G3DSA:3.30.565.10 421 587 6.8E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 PIRSF PIRSF003167 1 601 2.1E-192 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 Pfam PF00672 HAMP domain 176 224 1.5E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 501 586 1.2E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 SUPERFAMILY SSF158472 177 226 2.22E-7 T 28-03-2018 DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 Pfam PF07730 Histidine kinase 394 457 5.3E-18 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 SUPERFAMILY SSF55874 465 587 6.55E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 Gene3D G3DSA:3.30.450.40 211 371 1.3E-6 T 28-03-2018 IPR029016 GAF domain-like DDI_RS10590 837f4f4cabb7638e4debc2e80d75412a 603 SMART SM00387 498 591 1.1E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 SUPERFAMILY SSF54211 307 458 2.09E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 SUPERFAMILY SSF54211 259 273 2.09E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 349 434 1.9E-9 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 Gene3D G3DSA:3.40.50.300 77 287 1.5E-39 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 Gene3D G3DSA:3.30.230.10 290 458 3.3E-30 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 PRINTS PR01874 DNA repair protein radA signature 217 245 2.3E-93 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 PRINTS PR01874 DNA repair protein radA signature 252 278 2.3E-93 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 PRINTS PR01874 DNA repair protein radA signature 87 115 2.3E-93 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 PRINTS PR01874 DNA repair protein radA signature 326 349 2.3E-93 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 PRINTS PR01874 DNA repair protein radA signature 128 145 2.3E-93 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 PRINTS PR01874 DNA repair protein radA signature 11 35 2.3E-93 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 PRINTS PR01874 DNA repair protein radA signature 178 202 2.3E-93 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 Pfam PF13481 AAA domain 89 226 6.3E-14 T 28-03-2018 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 SUPERFAMILY SSF52540 73 291 7.14E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 455 2.8E-233 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 Hamap MF_01498 DNA repair protein RadA [radA]. 22 459 42.916 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DDI_RS01225 041bba7ccace9876b30b51507a8b0580 461 SMART SM00382 95 249 4.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 SUPERFAMILY SSF52540 3 301 6.7E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 Gene3D G3DSA:3.40.50.300 1 80 2.8E-8 T 28-03-2018 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 6.1E-175 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 PIRSF PIRSF006641 1 363 3.1E-157 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 Gene3D G3DSA:3.10.20.30 263 362 6.4E-46 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.6E-39 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.3E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 Gene3D G3DSA:1.10.150.300 110 200 5.2E-27 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.333 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DDI_RS09645 cd8084c774c358d2c49ddce7410df32f 363 SUPERFAMILY SSF81271 279 359 6.1E-36 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DDI_RS10100 1bac67d511fec2311c651c308c43f4c4 73 Pfam PF09012 FeoC like transcriptional regulator 2 71 2.6E-20 T 28-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC DDI_RS10100 1bac67d511fec2311c651c308c43f4c4 73 SUPERFAMILY SSF46785 1 72 4.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10100 1bac67d511fec2311c651c308c43f4c4 73 Gene3D G3DSA:1.10.10.10 1 72 1.7E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06690 542beaae67df95f15a74b311ba05d8ba 76 Pfam PF06906 Protein of unknown function (DUF1272) 2 58 6.7E-30 T 28-03-2018 IPR010696 Protein of unknown function DUF1272 DDI_RS06690 542beaae67df95f15a74b311ba05d8ba 76 Gene3D G3DSA:2.20.28.40 28 60 3.0E-4 T 28-03-2018 DDI_RS09930 23c5a2d6c8ec3fd47ad27cc5144a9b68 296 Gene3D G3DSA:1.10.3720.10 57 285 4.1E-47 T 28-03-2018 DDI_RS09930 23c5a2d6c8ec3fd47ad27cc5144a9b68 296 SUPERFAMILY SSF160964 5 49 2.75E-5 T 28-03-2018 DDI_RS09930 23c5a2d6c8ec3fd47ad27cc5144a9b68 296 Gene3D G3DSA:1.20.58.370 1 39 2.6E-6 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain DDI_RS09930 23c5a2d6c8ec3fd47ad27cc5144a9b68 296 SUPERFAMILY SSF161098 49 275 5.36E-60 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09930 23c5a2d6c8ec3fd47ad27cc5144a9b68 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 275 1.2E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 SUPERFAMILY SSF48452 38 133 2.21E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 Pfam PF13432 Tetratricopeptide repeat 113 168 0.019 T 28-03-2018 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 Gene3D G3DSA:1.25.40.10 29 159 6.2E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 SMART SM00028 69 102 91.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 SMART SM00028 214 247 0.035 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 SMART SM00028 107 140 250.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 SMART SM00028 180 213 210.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 Pfam PF14559 Tetratricopeptide repeat 191 245 2.1E-8 T 28-03-2018 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.417 T 28-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 Gene3D G3DSA:1.25.40.10 160 358 3.0E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS11140 e963d57145c70ad47d6fa34d5f1656b3 389 SUPERFAMILY SSF48452 107 278 8.72E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 ProSitePatterns PS00352 'Cold-shock' domain signature. 27 46 - T 28-03-2018 IPR019844 Cold-shock conserved site DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 SMART SM00357 15 79 2.2E-34 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 Gene3D G3DSA:2.40.50.140 7 79 8.8E-29 T 28-03-2018 DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 SUPERFAMILY SSF50249 10 78 3.21E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 PIRSF PIRSF002599 9 79 4.9E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 PRINTS PR00050 Cold shock protein signature 37 46 1.9E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 PRINTS PR00050 Cold shock protein signature 52 70 1.9E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 PRINTS PR00050 Cold shock protein signature 16 31 1.9E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS04780 e78c9ba6745fd5467592531b7da0ff97 79 Pfam PF00313 'Cold-shock' DNA-binding domain 15 78 1.7E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDI_RS16675 200cff6df6394b5acf67ccc1c13d6ce9 65 Gene3D G3DSA:3.30.50.10 3 61 2.0E-26 T 28-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 DDI_RS16675 200cff6df6394b5acf67ccc1c13d6ce9 65 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 1.2E-25 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DDI_RS16675 200cff6df6394b5acf67ccc1c13d6ce9 65 SUPERFAMILY SSF57716 5 62 9.55E-22 T 28-03-2018 DDI_RS16675 200cff6df6394b5acf67ccc1c13d6ce9 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 19.738 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DDI_RS03520 dad48d92916ecf36b097e8a6904594b3 239 Gene3D G3DSA:3.40.50.150 30 239 1.1E-31 T 28-03-2018 DDI_RS03520 dad48d92916ecf36b097e8a6904594b3 239 SUPERFAMILY SSF53335 18 237 1.03E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS03520 dad48d92916ecf36b097e8a6904594b3 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.64 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DDI_RS03520 dad48d92916ecf36b097e8a6904594b3 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 237 8.4E-70 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DDI_RS03520 dad48d92916ecf36b097e8a6904594b3 239 Pfam PF02390 Putative methyltransferase 64 233 9.3E-61 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DDI_RS01165 0990758525009f72c70f10318ab68b2c 321 Gene3D G3DSA:1.10.3720.10 5 302 1.4E-27 T 28-03-2018 DDI_RS01165 0990758525009f72c70f10318ab68b2c 321 SUPERFAMILY SSF161098 101 296 5.89E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01165 0990758525009f72c70f10318ab68b2c 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 314 7.6E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05175 35701b10a4aaf2f3ae0ba101330d0530 394 Gene3D G3DSA:3.30.1150.10 316 388 3.0E-20 T 28-03-2018 DDI_RS05175 35701b10a4aaf2f3ae0ba101330d0530 394 SUPERFAMILY SSF74653 306 394 3.14E-22 T 28-03-2018 DDI_RS05175 35701b10a4aaf2f3ae0ba101330d0530 394 Pfam PF06519 TolA C-terminal 297 391 1.2E-37 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 DDI_RS05175 35701b10a4aaf2f3ae0ba101330d0530 394 TIGRFAM TIGR02794 tolA_full: protein TolA 12 393 2.6E-93 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 DDI_RS04885 2fe811ae237ed74335d1541c16db64b3 307 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 277 1.6E-44 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS04885 2fe811ae237ed74335d1541c16db64b3 307 SMART SM00062 47 279 6.6E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS04885 2fe811ae237ed74335d1541c16db64b3 307 SUPERFAMILY SSF53850 7 280 2.17E-59 T 28-03-2018 DDI_RS04885 2fe811ae237ed74335d1541c16db64b3 307 Gene3D G3DSA:3.40.190.10 4 176 1.3E-30 T 28-03-2018 DDI_RS04885 2fe811ae237ed74335d1541c16db64b3 307 Gene3D G3DSA:3.40.190.10 177 307 1.5E-15 T 28-03-2018 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SUPERFAMILY SSF88723 7 170 7.61E-57 T 28-03-2018 IPR029060 PIN domain-like DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Gene3D G3DSA:3.30.70.370 770 944 8.9E-50 T 28-03-2018 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Gene3D G3DSA:3.30.70.370 673 763 8.1E-17 T 28-03-2018 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Pfam PF00476 DNA polymerase family A 568 941 1.1E-157 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Gene3D G3DSA:1.20.1060.10 559 672 5.0E-33 T 28-03-2018 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 9.3E-56 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SUPERFAMILY SSF56672 538 944 4.45E-157 T 28-03-2018 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SMART SM00475 7 268 8.2E-138 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SUPERFAMILY SSF47807 171 291 1.64E-30 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Gene3D G3DSA:3.30.420.10 322 558 1.4E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SMART SM00482 702 908 8.8E-116 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 TIGRFAM TIGR00593 pola: DNA polymerase I 10 944 2.0E-285 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SMART SM00279 173 208 2.2E-12 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SMART SM00474 330 533 6.5E-43 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Pfam PF01612 3'-5' exonuclease 330 533 2.9E-37 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 4.2E-30 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 829 840 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 861 877 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 693 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 891 904 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 746 759 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 716 739 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 807 818 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 770 795 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 PRINTS PR00868 DNA-polymerase family A (pol I) signature 694 709 2.8E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 ProSitePatterns PS00447 DNA polymerase family A signature. 770 789 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SUPERFAMILY SSF53098 333 387 3.09E-52 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 SUPERFAMILY SSF53098 415 533 3.09E-52 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Gene3D G3DSA:3.40.50.1010 7 183 6.5E-69 T 28-03-2018 IPR029060 PIN domain-like DDI_RS19845 890a97267c033766eec6d71915b486ea 944 Gene3D G3DSA:1.10.150.20 184 269 2.1E-24 T 28-03-2018 DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 Gene3D G3DSA:1.10.287.130 75 189 8.3E-7 T 28-03-2018 DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 349 3.9E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 SUPERFAMILY SSF55874 194 350 1.96E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 Gene3D G3DSA:3.30.565.10 191 351 1.5E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 1.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 348 1.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 1.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS08805 ba7ddcc5e6ded18d0751436af1a8b603 360 SMART SM00387 234 351 2.8E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS08455 5b648ec080ac69db45df1465ed5a373b 308 Pfam PF00795 Carbon-nitrogen hydrolase 6 277 5.9E-49 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS08455 5b648ec080ac69db45df1465ed5a373b 308 Gene3D G3DSA:3.60.110.10 2 305 1.1E-73 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS08455 5b648ec080ac69db45df1465ed5a373b 308 ProSitePatterns PS00921 Nitrilases / cyanide hydratase active site signature. 161 174 - T 28-03-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 DDI_RS08455 5b648ec080ac69db45df1465ed5a373b 308 SUPERFAMILY SSF56317 3 296 6.8E-68 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS14875 4b8580c9b8b535d9199ffc3d4022e25f 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 325 9.3E-47 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS14875 4b8580c9b8b535d9199ffc3d4022e25f 345 Gene3D G3DSA:1.10.3470.10 19 331 3.7E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS14710 fd332984a0c9d3deef9137baa67ee97b 244 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 8.3E-87 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD DDI_RS14710 fd332984a0c9d3deef9137baa67ee97b 244 Pfam PF13525 Outer membrane lipoprotein 28 236 7.8E-83 T 28-03-2018 DDI_RS14710 fd332984a0c9d3deef9137baa67ee97b 244 SUPERFAMILY SSF48452 27 121 5.4E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS14710 fd332984a0c9d3deef9137baa67ee97b 244 Gene3D G3DSA:1.25.20.10 31 242 9.7E-16 T 28-03-2018 DDI_RS14710 fd332984a0c9d3deef9137baa67ee97b 244 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 38.722 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD DDI_RS00205 8b2bddc70eab8b5015342d1c34833829 136 Pfam PF14760 Rnk N-terminus 4 44 1.4E-13 T 28-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain DDI_RS00205 8b2bddc70eab8b5015342d1c34833829 136 Gene3D G3DSA:3.10.50.30 45 136 1.3E-21 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DDI_RS00205 8b2bddc70eab8b5015342d1c34833829 136 SUPERFAMILY SSF54534 49 126 9.55E-17 T 28-03-2018 DDI_RS00205 8b2bddc70eab8b5015342d1c34833829 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 1.9E-16 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DDI_RS00205 8b2bddc70eab8b5015342d1c34833829 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.131 T 28-03-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 DDI_RS00205 8b2bddc70eab8b5015342d1c34833829 136 PIRSF PIRSF006092 8 128 1.9E-22 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DDI_RS00205 8b2bddc70eab8b5015342d1c34833829 136 Gene3D G3DSA:1.10.286.20 3 44 1.3E-14 T 28-03-2018 DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.946 T 28-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 Gene3D G3DSA:3.40.50.300 235 426 6.6E-44 T 28-03-2018 DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 Gene3D G3DSA:3.40.50.300 3 234 1.2E-50 T 28-03-2018 DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 SMART SM00490 270 351 2.7E-30 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.8E-44 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 SUPERFAMILY SSF52540 84 363 3.62E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 SMART SM00487 28 234 9.4E-52 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS18865 e9a0f11f13ff8c61b6f059962a143b0d 428 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.4E-28 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS16815 4f6c6ce1b5824756f05fbf810f596b6a 200 Gene3D G3DSA:3.20.19.10 1 176 1.9E-50 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DDI_RS16815 4f6c6ce1b5824756f05fbf810f596b6a 200 Pfam PF00694 Aconitase C-terminal domain 1 125 1.8E-40 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 DDI_RS16815 4f6c6ce1b5824756f05fbf810f596b6a 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.3E-98 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DDI_RS16815 4f6c6ce1b5824756f05fbf810f596b6a 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 45.343 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DDI_RS16815 4f6c6ce1b5824756f05fbf810f596b6a 200 SUPERFAMILY SSF52016 1 194 2.55E-61 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 Gene3D G3DSA:1.20.120.30 23 191 2.3E-35 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 SUPERFAMILY SSF58104 237 518 4.45E-76 T 28-03-2018 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 Gene3D G3DSA:1.10.287.950 216 324 2.0E-19 T 28-03-2018 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 Gene3D G3DSA:1.10.287.950 325 521 8.4E-49 T 28-03-2018 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 SMART SM00283 270 517 1.2E-93 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 Pfam PF02203 Tar ligand binding domain homologue 1 173 2.5E-48 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 4.4E-89 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 192 212 4.4E-89 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 4.4E-89 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.4E-89 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 4.4E-89 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 4.4E-89 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 4.4E-89 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 Pfam PF00672 HAMP domain 217 263 1.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 SUPERFAMILY SSF47170 39 180 1.16E-39 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 SMART SM00319 44 183 5.9E-27 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 SMART SM00304 217 269 3.9E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12160 82b63772e1e0052a60d9cc025b6f71a3 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 485 1.2E-58 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS14970 00fd2acb541b99ce07a0236bca6067b2 257 Gene3D G3DSA:3.40.50.1820 23 254 4.1E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS14970 00fd2acb541b99ce07a0236bca6067b2 257 Pfam PF12697 Alpha/beta hydrolase family 36 247 5.6E-16 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS14970 00fd2acb541b99ce07a0236bca6067b2 257 SUPERFAMILY SSF53474 35 250 1.09E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 PIRSF PIRSF002134 1 118 1.9E-40 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 SUPERFAMILY SSF46946 2 114 2.5E-45 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.0E-32 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 Gene3D G3DSA:1.10.8.50 1 66 4.2E-21 T 28-03-2018 DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.622 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 Gene3D G3DSA:4.10.910.10 67 84 1.9E-16 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 Gene3D G3DSA:4.10.910.10 85 118 1.8E-24 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS17985 b3f07dcf7663ae17dc7f050a32696230 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.5E-52 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.1E-33 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.1E-33 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.1E-33 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.1E-33 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 SMART SM01130 1 290 3.2E-143 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 SUPERFAMILY SSF51569 1 292 1.15E-99 T 28-03-2018 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 PIRSF PIRSF001365 1 292 3.6E-93 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 1.3E-116 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.962 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 Gene3D G3DSA:3.20.20.70 1 292 2.0E-92 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS04730 293571d8137fee7c642eae709393c66a 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 2.6E-121 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDI_RS09810 4447251193539ff15605f573ae7c0d80 194 PIRSF PIRSF004982 5 191 8.3E-53 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 DDI_RS09810 4447251193539ff15605f573ae7c0d80 194 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 10 179 1.3E-57 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 DDI_RS09810 4447251193539ff15605f573ae7c0d80 194 Pfam PF03843 Outer membrane lipoprotein Slp family 19 166 3.0E-51 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 SUPERFAMILY SSF56655 1 260 1.83E-87 T 28-03-2018 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 Gene3D G3DSA:3.40.190.80 146 267 4.7E-38 T 28-03-2018 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 Pfam PF00459 Inositol monophosphatase family 2 256 9.8E-73 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 Gene3D G3DSA:3.30.540.10 1 145 7.2E-48 T 28-03-2018 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.7E-37 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.7E-37 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.7E-37 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.7E-37 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 8.1E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 8.1E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 8.1E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 8.1E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 8.1E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS14105 0fb959e5c474e7bfcb78509fe15e8ca8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 8.1E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS19630 986c1d52f5a8048276fc7e2916d12fe3 88 Pfam PF07338 Protein of unknown function (DUF1471) 39 88 7.2E-15 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS19630 986c1d52f5a8048276fc7e2916d12fe3 88 Gene3D G3DSA:3.30.1660.10 32 87 1.9E-15 T 28-03-2018 IPR025543 Dodecin-like DDI_RS19630 986c1d52f5a8048276fc7e2916d12fe3 88 SUPERFAMILY SSF159871 3 88 4.32E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS18620 2abb840ef1aa69073da80c457fc8bae0 449 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 DDI_RS18620 2abb840ef1aa69073da80c457fc8bae0 449 PIRSF PIRSF002808 5 449 1.3E-171 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS18620 2abb840ef1aa69073da80c457fc8bae0 449 Gene3D G3DSA:1.20.1250.20 18 224 3.0E-34 T 28-03-2018 DDI_RS18620 2abb840ef1aa69073da80c457fc8bae0 449 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 7.2E-165 T 28-03-2018 DDI_RS18620 2abb840ef1aa69073da80c457fc8bae0 449 Pfam PF07690 Major Facilitator Superfamily 34 400 4.4E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS18620 2abb840ef1aa69073da80c457fc8bae0 449 SUPERFAMILY SSF103473 13 441 1.15E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS18620 2abb840ef1aa69073da80c457fc8bae0 449 Gene3D G3DSA:1.20.1250.20 240 449 3.9E-30 T 28-03-2018 DDI_RS18620 2abb840ef1aa69073da80c457fc8bae0 449 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 7.6E-259 T 28-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 DDI_RS07720 a1629f487c09216dc9c13bf49951d9e4 325 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 320 2.0E-5 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DDI_RS07720 a1629f487c09216dc9c13bf49951d9e4 325 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 175 4.7E-40 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DDI_RS07720 a1629f487c09216dc9c13bf49951d9e4 325 Gene3D G3DSA:3.40.50.300 2 194 5.4E-27 T 28-03-2018 DDI_RS07720 a1629f487c09216dc9c13bf49951d9e4 325 SUPERFAMILY SSF52540 5 167 1.67E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 SUPERFAMILY SSF55785 45 152 3.66E-23 T 28-03-2018 IPR000014 PAS domain DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 44 156 2.0E-18 T 28-03-2018 IPR000014 PAS domain DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 SMART SM00086 110 152 7.8E-8 T 28-03-2018 IPR001610 PAC motif DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 Gene3D G3DSA:3.40.50.10600 29 154 3.4E-23 T 28-03-2018 DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 337 493 1.5E-46 T 28-03-2018 IPR000160 GGDEF domain DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 SMART SM00267 326 498 1.8E-57 T 28-03-2018 IPR000160 GGDEF domain DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 Pfam PF13426 PAS domain 48 151 9.0E-14 T 28-03-2018 IPR000014 PAS domain DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 SUPERFAMILY SSF55073 342 499 2.16E-48 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 Pfam PF13185 GAF domain 174 318 2.9E-14 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 SUPERFAMILY SSF55781 144 319 2.62E-23 T 28-03-2018 IPR029016 GAF domain-like DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 Gene3D G3DSA:3.30.70.270 331 501 6.3E-56 T 28-03-2018 DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 SMART SM00065 174 327 3.2E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 496 9.6E-41 T 28-03-2018 IPR000160 GGDEF domain DDI_RS14235 e3eb96470bc7939b03e1caed80b89535 505 Gene3D G3DSA:3.30.450.40 155 330 7.7E-18 T 28-03-2018 IPR029016 GAF domain-like DDI_RS07095 8f931a3f8c2d3ff4ae1907d46519d516 131 Gene3D G3DSA:3.10.129.10 8 130 1.9E-31 T 28-03-2018 DDI_RS07095 8f931a3f8c2d3ff4ae1907d46519d516 131 Pfam PF03061 Thioesterase superfamily 31 102 7.3E-16 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDI_RS07095 8f931a3f8c2d3ff4ae1907d46519d516 131 SUPERFAMILY SSF54637 14 130 1.53E-32 T 28-03-2018 IPR029069 HotDog domain DDI_RS07820 a9cd05066abac9cf9a61b3e2fdf50e93 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS07820 a9cd05066abac9cf9a61b3e2fdf50e93 362 SUPERFAMILY SSF56796 11 357 3.27E-56 T 28-03-2018 DDI_RS07820 a9cd05066abac9cf9a61b3e2fdf50e93 362 Gene3D G3DSA:3.40.50.1970 1 162 5.0E-21 T 28-03-2018 DDI_RS07820 a9cd05066abac9cf9a61b3e2fdf50e93 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 6.7E-45 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDI_RS07820 a9cd05066abac9cf9a61b3e2fdf50e93 362 PIRSF PIRSF000112 2 362 3.9E-112 T 28-03-2018 DDI_RS07820 a9cd05066abac9cf9a61b3e2fdf50e93 362 Gene3D G3DSA:1.20.1090.10 163 362 8.2E-28 T 28-03-2018 DDI_RS06900 93440d5d46770c598d6d75d7cb54b0fe 338 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS06900 93440d5d46770c598d6d75d7cb54b0fe 338 SUPERFAMILY SSF52540 16 318 8.21E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06900 93440d5d46770c598d6d75d7cb54b0fe 338 Gene3D G3DSA:3.40.50.300 113 314 7.1E-12 T 28-03-2018 DDI_RS06900 93440d5d46770c598d6d75d7cb54b0fe 338 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 21 325 3.7E-93 T 28-03-2018 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 DDI_RS06900 93440d5d46770c598d6d75d7cb54b0fe 338 Gene3D G3DSA:3.30.450.90 14 112 6.2E-20 T 28-03-2018 DDI_RS06900 93440d5d46770c598d6d75d7cb54b0fe 338 Pfam PF00437 Type II/IV secretion system protein 20 311 4.7E-43 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 Gene3D G3DSA:3.40.50.150 23 505 1.9E-19 T 28-03-2018 DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 SUPERFAMILY SSF48452 585 726 1.04E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 Gene3D G3DSA:1.20.58.280 677 853 3.8E-7 T 28-03-2018 DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 Pfam PF10119 Predicted methyltransferase regulatory domain 231 309 2.4E-15 T 28-03-2018 IPR018773 Methyltransferase regulatory domain, predicted DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 Gene3D G3DSA:1.25.40.10 555 676 2.0E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 Pfam PF13844 Glycosyl transferase family 41 778 923 1.7E-25 T 28-03-2018 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 Pfam PF13844 Glycosyl transferase family 41 943 1104 7.7E-14 T 28-03-2018 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 Gene3D G3DSA:3.40.50.2000 923 1111 3.0E-15 T 28-03-2018 DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 SUPERFAMILY SSF53335 28 177 2.73E-20 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS11960 545916845ba2deb5b5e309290d83dfc8 1148 Pfam PF08242 Methyltransferase domain 57 155 1.8E-11 T 28-03-2018 IPR013217 Methyltransferase type 12 DDI_RS01355 a952a5b48d0118fec8a57b48849721e0 224 Gene3D G3DSA:1.20.120.530 79 224 1.0E-35 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS01355 a952a5b48d0118fec8a57b48849721e0 224 SUPERFAMILY SSF46785 18 86 1.54E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01355 a952a5b48d0118fec8a57b48849721e0 224 Pfam PF07729 FCD domain 92 214 4.2E-31 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS01355 a952a5b48d0118fec8a57b48849721e0 224 SUPERFAMILY SSF48008 88 222 3.14E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS01355 a952a5b48d0118fec8a57b48849721e0 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 82 2.3E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS01355 a952a5b48d0118fec8a57b48849721e0 224 SMART SM00895 92 216 1.0E-19 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS01355 a952a5b48d0118fec8a57b48849721e0 224 SMART SM00345 24 82 6.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS01355 a952a5b48d0118fec8a57b48849721e0 224 Gene3D G3DSA:1.10.10.10 5 78 2.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21255 5a9b54751a9d1e04c271cf8afbb974ff 251 SUPERFAMILY SSF53335 19 248 4.49E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS21255 5a9b54751a9d1e04c271cf8afbb974ff 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 2.5E-86 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DDI_RS21255 5a9b54751a9d1e04c271cf8afbb974ff 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DDI_RS21255 5a9b54751a9d1e04c271cf8afbb974ff 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DDI_RS21255 5a9b54751a9d1e04c271cf8afbb974ff 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 20 250 1.8E-104 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DDI_RS21255 5a9b54751a9d1e04c271cf8afbb974ff 251 Gene3D G3DSA:3.40.50.150 5 250 4.0E-46 T 28-03-2018 DDI_RS21255 5a9b54751a9d1e04c271cf8afbb974ff 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 38.959 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DDI_RS07735 6bab8ba786aa989235bf708c6746b4cf 393 SUPERFAMILY SSF103473 17 391 1.23E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS07735 6bab8ba786aa989235bf708c6746b4cf 393 Gene3D G3DSA:1.20.1250.20 210 392 9.8E-22 T 28-03-2018 DDI_RS07735 6bab8ba786aa989235bf708c6746b4cf 393 Gene3D G3DSA:1.20.1250.20 4 209 7.9E-18 T 28-03-2018 DDI_RS07735 6bab8ba786aa989235bf708c6746b4cf 393 Pfam PF07690 Major Facilitator Superfamily 21 346 1.1E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS07735 6bab8ba786aa989235bf708c6746b4cf 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 1.7E-185 T 28-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 DDI_RS17160 877d563970947caad30b299a5ff47fc9 272 Gene3D G3DSA:3.30.450.40 87 272 1.6E-45 T 28-03-2018 IPR029016 GAF domain-like DDI_RS17160 877d563970947caad30b299a5ff47fc9 272 Gene3D G3DSA:1.10.10.10 1 80 1.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17160 877d563970947caad30b299a5ff47fc9 272 SUPERFAMILY SSF55781 86 268 1.11E-43 T 28-03-2018 IPR029016 GAF domain-like DDI_RS17160 877d563970947caad30b299a5ff47fc9 272 SMART SM00346 19 109 1.7E-39 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS17160 877d563970947caad30b299a5ff47fc9 272 SUPERFAMILY SSF46785 20 93 4.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17160 877d563970947caad30b299a5ff47fc9 272 Pfam PF01614 Bacterial transcriptional regulator 139 264 6.2E-37 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal DDI_RS17160 877d563970947caad30b299a5ff47fc9 272 Pfam PF09339 IclR helix-turn-helix domain 21 69 2.0E-14 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS01755 3f74e60421774c48799e08760ea90353 287 Gene3D G3DSA:3.40.50.720 1 262 4.5E-46 T 28-03-2018 DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.6E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.6E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.6E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.6E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PIRSF PIRSF000126 1 263 5.5E-65 T 28-03-2018 DDI_RS01755 3f74e60421774c48799e08760ea90353 287 Pfam PF00106 short chain dehydrogenase 6 194 9.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.2E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01755 3f74e60421774c48799e08760ea90353 287 SUPERFAMILY SSF51735 6 233 1.31E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS16525 6a3831b08b1ee617321f1b60481e6da9 326 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 326 2.5E-110 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 DDI_RS16525 6a3831b08b1ee617321f1b60481e6da9 326 SUPERFAMILY SSF53659 3 326 1.6E-103 T 28-03-2018 DDI_RS16525 6a3831b08b1ee617321f1b60481e6da9 326 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 326 35.242 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 DDI_RS16525 6a3831b08b1ee617321f1b60481e6da9 326 Gene3D G3DSA:3.40.718.10 1 326 1.1E-123 T 28-03-2018 DDI_RS16525 6a3831b08b1ee617321f1b60481e6da9 326 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 3.3E-101 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 Pfam PF06723 MreB/Mbl protein 11 338 2.8E-150 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 Gene3D G3DSA:3.30.420.40 257 321 2.2E-8 T 28-03-2018 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 Gene3D G3DSA:3.30.420.40 8 163 3.5E-42 T 28-03-2018 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 Gene3D G3DSA:3.90.640.10 199 256 5.7E-27 T 28-03-2018 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 SUPERFAMILY SSF53067 9 152 6.66E-38 T 28-03-2018 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 6.1E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 6.1E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 6.1E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 6.1E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 6.1E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 SUPERFAMILY SSF53067 153 340 2.92E-50 T 28-03-2018 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 3.8E-170 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDI_RS00130 380bc441b1ff176a6e2ac49d44fdd426 347 Gene3D G3DSA:3.30.420.40 164 198 2.9E-4 T 28-03-2018 DDI_RS06980 f8def447759bfc12e7334cac2c98f11f 85 SUPERFAMILY SSF47413 2 70 2.82E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS06980 f8def447759bfc12e7334cac2c98f11f 85 SMART SM00530 5 64 9.4E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS06980 f8def447759bfc12e7334cac2c98f11f 85 Gene3D G3DSA:1.10.3100.10 1 84 1.6E-14 T 28-03-2018 IPR027910 YdiL-like domain DDI_RS06980 f8def447759bfc12e7334cac2c98f11f 85 Pfam PF01381 Helix-turn-helix 6 64 2.0E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 Pfam PF00199 Catalase 35 412 1.6E-166 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 PRINTS PR00067 Catalase signature 48 71 1.2E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 PRINTS PR00067 Catalase signature 345 371 1.2E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 PRINTS PR00067 Catalase signature 131 148 1.2E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 PRINTS PR00067 Catalase signature 313 340 1.2E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 PRINTS PR00067 Catalase signature 150 168 1.2E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 PRINTS PR00067 Catalase signature 110 128 1.2E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 ProSitePatterns PS00438 Catalase proximal active site signature. 71 87 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 PIRSF PIRSF038928 25 505 9.3E-179 T 28-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 Gene3D G3DSA:2.40.180.10 26 382 5.7E-149 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 SMART SM01060 35 416 2.1E-239 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 SUPERFAMILY SSF56634 32 504 4.97E-186 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 Pfam PF06628 Catalase-related immune-responsive 438 496 3.9E-12 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS14855 350367ee3e36f006f2fdc43030277e3f 515 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 358 366 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 DDI_RS07425 717ec83ffd449e2aa3fddfeca38f640b 335 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 35 308 2.2E-85 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS07425 717ec83ffd449e2aa3fddfeca38f640b 335 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 13 334 6.8E-80 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS07425 717ec83ffd449e2aa3fddfeca38f640b 335 SUPERFAMILY SSF50891 198 315 4.17E-11 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS07425 717ec83ffd449e2aa3fddfeca38f640b 335 SMART SM00797 34 326 2.2E-130 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 Pfam PF00664 ABC transporter transmembrane region 26 291 2.7E-42 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 Pfam PF00005 ABC transporter 369 514 1.4E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 Gene3D G3DSA:3.40.50.300 339 587 1.2E-60 T 28-03-2018 DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 SUPERFAMILY SSF90123 8 329 2.22E-52 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 4.4E-194 T 28-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 Gene3D G3DSA:1.20.1560.10 7 336 4.6E-40 T 28-03-2018 DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 SMART SM00382 375 560 1.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 SUPERFAMILY SSF52540 361 582 5.42E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08090 35acf505d1651045ad2a2b815946d334 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS17325 8b93e3922edefdcc32b624563b354cd8 372 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 3.6E-158 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17325 8b93e3922edefdcc32b624563b354cd8 372 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 2.0E-176 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 DDI_RS17325 8b93e3922edefdcc32b624563b354cd8 372 Gene3D G3DSA:3.40.50.720 1 206 2.9E-22 T 28-03-2018 DDI_RS17325 8b93e3922edefdcc32b624563b354cd8 372 Gene3D G3DSA:3.90.25.10 250 371 1.4E-31 T 28-03-2018 DDI_RS17325 8b93e3922edefdcc32b624563b354cd8 372 Gene3D G3DSA:3.90.25.10 207 249 6.9E-22 T 28-03-2018 DDI_RS17325 8b93e3922edefdcc32b624563b354cd8 372 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 55.644 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 DDI_RS17325 8b93e3922edefdcc32b624563b354cd8 372 SUPERFAMILY SSF51735 3 352 1.38E-86 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS15630 a66ca8ac7ea495c1776898f9239dc650 243 SMART SM01207 40 215 3.2E-84 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DDI_RS15630 a66ca8ac7ea495c1776898f9239dc650 243 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 37 223 18.225 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DDI_RS15630 a66ca8ac7ea495c1776898f9239dc650 243 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 31 225 9.3E-81 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DDI_RS15630 a66ca8ac7ea495c1776898f9239dc650 243 Pfam PF02660 Glycerol-3-phosphate acyltransferase 41 214 1.1E-49 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DDI_RS18720 60f15e467559556e2ae73c4b43b7f93c 246 SUPERFAMILY SSF69618 1 245 2.35E-53 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18720 60f15e467559556e2ae73c4b43b7f93c 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.9E-40 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDI_RS18720 60f15e467559556e2ae73c4b43b7f93c 246 Gene3D G3DSA:3.40.50.10090 1 121 4.7E-18 T 28-03-2018 DDI_RS18720 60f15e467559556e2ae73c4b43b7f93c 246 Gene3D G3DSA:3.40.50.10090 122 246 1.8E-22 T 28-03-2018 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 PIRSF PIRSF001423 1 563 6.6E-293 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 Gene3D G3DSA:3.40.1770.10 13 156 9.7E-29 T 28-03-2018 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 Gene3D G3DSA:3.40.1770.10 199 562 1.4E-159 T 28-03-2018 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 Hamap MF_00577 Urocanate hydratase [hutU]. 7 563 49.725 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 SUPERFAMILY SSF111326 12 562 1.2E-255 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 ProSitePatterns PS01233 Urocanase signature. 449 464 - T 28-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 Pfam PF17392 Urocanase C-terminal domain 359 552 1.0E-92 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 Pfam PF01175 Urocanase Rossmann-like domain 144 356 3.6E-83 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 14 561 5.9E-289 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13315 c9702caf3ba381bc79dae09ad7a24528 563 Pfam PF17391 Urocanase N-terminal domain 15 141 1.5E-61 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS10715 b37bcf3d812a6f93968d32b8c3b5a9e5 375 SUPERFAMILY SSF88874 247 374 4.32E-40 T 28-03-2018 DDI_RS10715 b37bcf3d812a6f93968d32b8c3b5a9e5 375 Gene3D G3DSA:4.10.1070.10 294 367 1.3E-20 T 28-03-2018 DDI_RS10715 b37bcf3d812a6f93968d32b8c3b5a9e5 375 Pfam PF12571 Phage tail-collar fibre protein 1 150 4.1E-64 T 28-03-2018 IPR022225 Phage tail fibre protein DDI_RS10715 b37bcf3d812a6f93968d32b8c3b5a9e5 375 Gene3D G3DSA:3.90.1340.10 241 293 7.9E-17 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS10715 b37bcf3d812a6f93968d32b8c3b5a9e5 375 Pfam PF07484 Phage Tail Collar Domain 249 296 3.3E-13 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS16475 20e05310ec4564f56ad8a28f9e66f0b4 367 Gene3D G3DSA:1.50.10.10 13 367 2.5E-59 T 28-03-2018 DDI_RS16475 20e05310ec4564f56ad8a28f9e66f0b4 367 Pfam PF07470 Glycosyl Hydrolase Family 88 48 362 6.1E-80 T 28-03-2018 IPR010905 Glycosyl hydrolase, family 88 DDI_RS16475 20e05310ec4564f56ad8a28f9e66f0b4 367 SUPERFAMILY SSF48208 48 361 5.33E-55 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 DDI_RS06990 eab4004ccd743b0a311eb2ac91639955 95 SUPERFAMILY SSF47413 3 70 4.22E-27 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS06990 eab4004ccd743b0a311eb2ac91639955 95 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 77 2.7E-36 T 28-03-2018 DDI_RS06990 eab4004ccd743b0a311eb2ac91639955 95 Gene3D G3DSA:1.10.260.40 2 71 5.9E-13 T 28-03-2018 DDI_RS00285 5e89e899b0b21fdefabb68b41c629c8e 100 SUPERFAMILY SSF52091 9 97 1.04E-16 T 28-03-2018 IPR002645 STAS domain DDI_RS00285 5e89e899b0b21fdefabb68b41c629c8e 100 Pfam PF13466 STAS domain 14 91 1.3E-18 T 28-03-2018 IPR002645 STAS domain DDI_RS00285 5e89e899b0b21fdefabb68b41c629c8e 100 Gene3D G3DSA:3.30.750.24 12 99 8.2E-8 T 28-03-2018 IPR002645 STAS domain DDI_RS00030 c9fe645b238d7b8ff2f31700aea94e69 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 252 3.8E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS00030 c9fe645b238d7b8ff2f31700aea94e69 256 Gene3D G3DSA:3.40.190.10 17 131 6.1E-31 T 28-03-2018 DDI_RS00030 c9fe645b238d7b8ff2f31700aea94e69 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS00030 c9fe645b238d7b8ff2f31700aea94e69 256 Gene3D G3DSA:3.40.190.10 132 248 6.8E-30 T 28-03-2018 DDI_RS00030 c9fe645b238d7b8ff2f31700aea94e69 256 SMART SM00062 34 253 5.0E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS00030 c9fe645b238d7b8ff2f31700aea94e69 256 SUPERFAMILY SSF53850 1 253 8.39E-67 T 28-03-2018 DDI_RS17860 b99bff05caf6477907f7ff379e34df52 532 Pfam PF01274 Malate synthase 12 531 9.9E-208 T 28-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DDI_RS17860 b99bff05caf6477907f7ff379e34df52 532 PIRSF PIRSF001363 1 532 7.3E-246 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DDI_RS17860 b99bff05caf6477907f7ff379e34df52 532 ProSitePatterns PS00510 Malate synthase signature. 265 280 - T 28-03-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DDI_RS17860 b99bff05caf6477907f7ff379e34df52 532 SUPERFAMILY SSF51645 13 531 1.96E-188 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DDI_RS17860 b99bff05caf6477907f7ff379e34df52 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 2.7E-249 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DDI_RS17860 b99bff05caf6477907f7ff379e34df52 532 Gene3D G3DSA:1.20.1220.12 414 531 1.3E-48 T 28-03-2018 DDI_RS17860 b99bff05caf6477907f7ff379e34df52 532 Gene3D G3DSA:3.20.20.360 79 413 1.6E-108 T 28-03-2018 DDI_RS14540 157d3b37536488e33fe42ea1f351b7af 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.975 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DDI_RS14540 157d3b37536488e33fe42ea1f351b7af 126 SUPERFAMILY SSF50692 1 122 1.37E-47 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS14540 157d3b37536488e33fe42ea1f351b7af 126 PIRSF PIRSF006246 1 124 7.3E-52 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DDI_RS14540 157d3b37536488e33fe42ea1f351b7af 126 Gene3D G3DSA:2.40.40.20 1 117 1.0E-51 T 28-03-2018 DDI_RS14540 157d3b37536488e33fe42ea1f351b7af 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-58 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DDI_RS14540 157d3b37536488e33fe42ea1f351b7af 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 5.7E-60 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DDI_RS14540 157d3b37536488e33fe42ea1f351b7af 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.5E-48 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DDI_RS09925 f759616da0bb30340a61055b293d68a0 543 Pfam PF06917 Periplasmic pectate lyase 22 529 2.0E-113 T 28-03-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 DDI_RS09925 f759616da0bb30340a61055b293d68a0 543 PIRSF PIRSF001432 1 542 5.3E-290 T 28-03-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 DDI_RS09925 f759616da0bb30340a61055b293d68a0 543 Gene3D G3DSA:1.50.10.20 15 374 1.4E-17 T 28-03-2018 DDI_RS09925 f759616da0bb30340a61055b293d68a0 543 Gene3D G3DSA:1.50.10.10 375 499 4.8E-5 T 28-03-2018 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.352 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 SUPERFAMILY SSF103263 4 352 1.83E-146 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 5.9E-138 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 Gene3D G3DSA:3.60.150.10 3 359 1.5E-159 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 Pfam PF01264 Chorismate synthase 10 345 1.6E-140 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 PIRSF PIRSF001456 3 359 2.0E-140 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS12950 650f36a3098bc9ac4d528fd103f9443d 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDI_RS06235 2e56fa157ea8adcd6134c83f36d39c9c 341 Gene3D G3DSA:3.40.50.2300 177 319 1.2E-27 T 28-03-2018 DDI_RS06235 2e56fa157ea8adcd6134c83f36d39c9c 341 Gene3D G3DSA:1.10.260.40 1 53 3.8E-21 T 28-03-2018 DDI_RS06235 2e56fa157ea8adcd6134c83f36d39c9c 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 2.0E-11 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS06235 2e56fa157ea8adcd6134c83f36d39c9c 341 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 310 5.0E-45 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DDI_RS06235 2e56fa157ea8adcd6134c83f36d39c9c 341 SUPERFAMILY SSF53822 60 322 3.43E-41 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS06235 2e56fa157ea8adcd6134c83f36d39c9c 341 SUPERFAMILY SSF47413 2 57 1.31E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS06235 2e56fa157ea8adcd6134c83f36d39c9c 341 Gene3D G3DSA:3.40.50.2300 54 176 7.1E-25 T 28-03-2018 DDI_RS06235 2e56fa157ea8adcd6134c83f36d39c9c 341 SMART SM00354 1 70 1.9E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 5.8E-45 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 SUPERFAMILY SSF52540 10 277 1.15E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 Gene3D G3DSA:3.40.50.300 6 281 2.1E-35 T 28-03-2018 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 SUPERFAMILY SSF54980 393 468 1.47E-16 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 0.0 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 Gene3D G3DSA:2.40.30.10 282 387 1.4E-22 T 28-03-2018 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 163 9.4E-19 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 3.6E-46 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 Gene3D G3DSA:3.30.70.870 394 469 3.3E-9 T 28-03-2018 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 5.7E-11 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.451 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DDI_RS01245 343c3652eb1e277bb3f4b8104ed2c7e7 529 SUPERFAMILY SSF50447 262 393 8.17E-29 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS19535 68fab0509f576e853ef644837f5527ab 240 Pfam PF00072 Response regulator receiver domain 4 117 2.8E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS19535 68fab0509f576e853ef644837f5527ab 240 Gene3D G3DSA:1.10.10.10 160 239 9.7E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19535 68fab0509f576e853ef644837f5527ab 240 PIRSF PIRSF006171 1 231 1.7E-77 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 DDI_RS19535 68fab0509f576e853ef644837f5527ab 240 Gene3D G3DSA:3.40.50.2300 1 141 8.0E-27 T 28-03-2018 DDI_RS19535 68fab0509f576e853ef644837f5527ab 240 SMART SM00448 2 117 1.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS19535 68fab0509f576e853ef644837f5527ab 240 SUPERFAMILY SSF52172 1 138 4.27E-30 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 285 4.5E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 528 553 8.1E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 SUPERFAMILY SSF52540 9 263 9.71E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 SMART SM00382 38 241 2.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 SMART SM00382 334 526 1.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 Pfam PF00005 ABC transporter 325 476 1.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 Pfam PF00005 ABC transporter 30 192 2.5E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 Gene3D G3DSA:3.40.50.300 6 293 5.8E-62 T 28-03-2018 DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 Gene3D G3DSA:3.40.50.300 303 563 4.8E-74 T 28-03-2018 DDI_RS01155 cb594829a62f355b6f385c1a62816743 566 SUPERFAMILY SSF52540 305 548 2.61E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14500 a8ed104624a940bbb1f410ca42dcc748 177 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 21.576 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 DDI_RS14500 a8ed104624a940bbb1f410ca42dcc748 177 SUPERFAMILY SSF55144 6 174 1.39E-42 T 28-03-2018 IPR009097 Cyclic phosphodiesterase DDI_RS14500 a8ed104624a940bbb1f410ca42dcc748 177 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 1.8E-37 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 DDI_RS14500 a8ed104624a940bbb1f410ca42dcc748 177 Gene3D G3DSA:3.90.1140.10 2 177 2.9E-30 T 28-03-2018 DDI_RS14500 a8ed104624a940bbb1f410ca42dcc748 177 Pfam PF02834 LigT like Phosphoesterase 13 89 1.0E-11 T 28-03-2018 IPR014051 Phosphoesterase, HXTX DDI_RS14500 a8ed104624a940bbb1f410ca42dcc748 177 Pfam PF02834 LigT like Phosphoesterase 93 132 4.1E-6 T 28-03-2018 IPR014051 Phosphoesterase, HXTX DDI_RS18585 959fcfb50edd430494362e953d898ada 332 Gene3D G3DSA:3.40.50.2300 173 332 7.1E-35 T 28-03-2018 DDI_RS18585 959fcfb50edd430494362e953d898ada 332 SUPERFAMILY SSF53822 64 318 1.05E-57 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS18585 959fcfb50edd430494362e953d898ada 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 276 9.3E-30 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DDI_RS18585 959fcfb50edd430494362e953d898ada 332 SUPERFAMILY SSF47413 5 64 5.12E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS18585 959fcfb50edd430494362e953d898ada 332 Gene3D G3DSA:3.40.50.2300 62 172 6.3E-27 T 28-03-2018 DDI_RS18585 959fcfb50edd430494362e953d898ada 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 53 7.0E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS18585 959fcfb50edd430494362e953d898ada 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 28-03-2018 DDI_RS18585 959fcfb50edd430494362e953d898ada 332 SMART SM00354 6 76 1.1E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS18585 959fcfb50edd430494362e953d898ada 332 Gene3D G3DSA:1.10.260.40 5 61 2.8E-15 T 28-03-2018 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 Gene3D G3DSA:1.10.287.730 146 172 4.1E-14 T 28-03-2018 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 Gene3D G3DSA:1.10.940.10 1 145 1.8E-33 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 1.5E-173 T 28-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 Gene3D G3DSA:3.30.70.1170 173 230 1.2E-18 T 28-03-2018 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 SUPERFAMILY SSF53335 139 428 3.8E-78 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 1.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 1.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 1.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 1.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 1.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 SUPERFAMILY SSF48013 6 149 1.8E-36 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 Pfam PF01029 NusB family 7 127 6.9E-25 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 Gene3D G3DSA:3.40.50.150 231 431 1.2E-56 T 28-03-2018 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 67.628 T 28-03-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS17940 d4df236480d9dbbc29970f0e1e919b3c 431 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 426 1.3E-74 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS15480 4b3d9bddd624d7cac4aec6c03fcc4a7b 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 9.6E-110 T 28-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DDI_RS15480 4b3d9bddd624d7cac4aec6c03fcc4a7b 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 37.442 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DDI_RS15480 4b3d9bddd624d7cac4aec6c03fcc4a7b 223 Pfam PF13394 4Fe-4S single cluster domain 24 127 1.1E-12 T 28-03-2018 DDI_RS15480 4b3d9bddd624d7cac4aec6c03fcc4a7b 223 PIRSF PIRSF000370 1 223 3.4E-71 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DDI_RS15480 4b3d9bddd624d7cac4aec6c03fcc4a7b 223 Gene3D G3DSA:3.20.20.70 23 220 9.3E-15 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS15480 4b3d9bddd624d7cac4aec6c03fcc4a7b 223 SUPERFAMILY SSF102114 26 118 8.5E-8 T 28-03-2018 DDI_RS15480 4b3d9bddd624d7cac4aec6c03fcc4a7b 223 Pfam PF04055 Radical SAM superfamily 27 123 7.3E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS00260 19906441dce2f60be713ff7baad819e1 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 3.0E-86 T 28-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 DDI_RS00260 19906441dce2f60be713ff7baad819e1 320 Pfam PF01699 Sodium/calcium exchanger protein 4 143 8.1E-28 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DDI_RS00260 19906441dce2f60be713ff7baad819e1 320 Pfam PF01699 Sodium/calcium exchanger protein 175 317 3.7E-27 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 SUPERFAMILY SSF53067 19 196 3.89E-50 T 28-03-2018 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 SUPERFAMILY SSF100934 504 615 1.61E-34 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 1.0E-273 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 SUPERFAMILY SSF100920 384 535 2.09E-52 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 Pfam PF00012 Hsp70 protein 21 600 3.9E-195 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 Gene3D G3DSA:3.30.420.40 19 208 2.7E-56 T 28-03-2018 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 SUPERFAMILY SSF53067 200 377 3.95E-51 T 28-03-2018 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 Gene3D G3DSA:3.30.420.40 209 357 3.0E-39 T 28-03-2018 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 5.1E-58 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 Gene3D G3DSA:1.20.1270.10 521 615 2.0E-10 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.748 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DDI_RS14070 9c64eae600f2a8ac7c52ea5ebf4a72ea 616 Gene3D G3DSA:2.60.34.10 382 520 1.4E-49 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 DDI_RS01645 33dc21bf87fd470b97214a7118d01b06 433 Gene3D G3DSA:1.20.1250.20 3 201 8.5E-41 T 28-03-2018 DDI_RS01645 33dc21bf87fd470b97214a7118d01b06 433 SUPERFAMILY SSF103473 4 413 6.93E-79 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS01645 33dc21bf87fd470b97214a7118d01b06 433 Gene3D G3DSA:1.20.1250.20 214 421 1.9E-22 T 28-03-2018 DDI_RS01645 33dc21bf87fd470b97214a7118d01b06 433 Pfam PF07690 Major Facilitator Superfamily 301 427 3.9E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS01645 33dc21bf87fd470b97214a7118d01b06 433 Pfam PF07690 Major Facilitator Superfamily 16 286 1.7E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS19070 94f64b4b6222e0b0ce890ac117cdaad7 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 4.3E-59 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 DDI_RS19070 94f64b4b6222e0b0ce890ac117cdaad7 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 2.0E-47 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 DDI_RS19070 94f64b4b6222e0b0ce890ac117cdaad7 105 Gene3D G3DSA:1.10.140.10 3 103 1.6E-59 T 28-03-2018 IPR023453 Methionine repressor MetJ domain DDI_RS19070 94f64b4b6222e0b0ce890ac117cdaad7 105 SUPERFAMILY SSF47598 2 105 4.67E-58 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS19070 94f64b4b6222e0b0ce890ac117cdaad7 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.412 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 2.1E-42 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 2.1E-42 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 2.1E-42 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 2.1E-42 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 SUPERFAMILY SSF55785 21 114 9.77E-25 T 28-03-2018 IPR000014 PAS domain DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 Gene3D G3DSA:1.10.287.950 321 517 6.1E-36 T 28-03-2018 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 Gene3D G3DSA:1.10.287.950 121 320 1.5E-10 T 28-03-2018 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 SMART SM00283 267 514 3.3E-63 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 Pfam PF08447 PAS fold 31 113 6.5E-16 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 SMART SM00086 80 121 9.7E-4 T 28-03-2018 IPR001610 PAC motif DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 Gene3D G3DSA:3.40.50.10600 8 120 6.8E-28 T 28-03-2018 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 2.2E-10 T 28-03-2018 IPR000014 PAS domain DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 482 3.6E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS10925 8ab2df14d2f3f974deb89ffbc4b87c9d 517 SUPERFAMILY SSF58104 240 514 7.46E-57 T 28-03-2018 DDI_RS18640 6c935937df06a2e0ff02c4d67a81eb81 207 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 203 1.7E-62 T 28-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 DDI_RS18640 6c935937df06a2e0ff02c4d67a81eb81 207 PIRSF PIRSF006324 1 207 1.8E-42 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS18640 6c935937df06a2e0ff02c4d67a81eb81 207 Pfam PF01810 LysE type translocator 14 206 1.8E-53 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 Pfam PF00005 ABC transporter 21 172 6.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 Pfam PF00005 ABC transporter 282 437 5.8E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 Gene3D G3DSA:3.40.50.300 2 269 3.3E-55 T 28-03-2018 DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 SUPERFAMILY SSF52540 279 495 9.67E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 SUPERFAMILY SSF52540 3 230 3.26E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 SMART SM00382 30 222 4.7E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 SMART SM00382 291 486 1.8E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS02780 fdb153cdfe40a6e8560d25dda07099f6 515 Gene3D G3DSA:3.40.50.300 270 506 5.8E-37 T 28-03-2018 DDI_RS06560 3c6eb560d96b72574fafa374f41025ff 371 Gene3D G3DSA:2.40.50.100 61 117 5.5E-14 T 28-03-2018 DDI_RS06560 3c6eb560d96b72574fafa374f41025ff 371 SUPERFAMILY SSF111369 51 260 2.62E-18 T 28-03-2018 DDI_RS06560 3c6eb560d96b72574fafa374f41025ff 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 261 2.5E-10 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS06560 3c6eb560d96b72574fafa374f41025ff 371 Gene3D G3DSA:1.10.287.470 118 160 3.6E-8 T 28-03-2018 DDI_RS06560 3c6eb560d96b72574fafa374f41025ff 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 357 1.9E-58 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS06560 3c6eb560d96b72574fafa374f41025ff 371 Gene3D G3DSA:2.40.50.100 163 364 9.1E-7 T 28-03-2018 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 SUPERFAMILY SSF51905 2 255 3.66E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 SUPERFAMILY SSF51905 356 446 3.66E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 7.0E-5 T 28-03-2018 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 7.0E-5 T 28-03-2018 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 520 1.5E-217 T 28-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 Pfam PF00890 FAD binding domain 10 392 9.4E-104 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 197 215 1.1E-9 T 28-03-2018 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 33 52 1.1E-9 T 28-03-2018 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.1E-9 T 28-03-2018 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 Gene3D G3DSA:1.20.58.100 438 532 7.9E-29 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 Gene3D G3DSA:3.50.50.60 4 437 7.0E-71 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 PIRSF PIRSF000171 340 531 1.5E-13 T 28-03-2018 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 PIRSF PIRSF000171 2 260 6.3E-24 T 28-03-2018 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 523 6.4E-14 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 SUPERFAMILY SSF56425 238 353 4.04E-40 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS14305 8d83b6db5e97203aa9c55a6b69d8a470 533 SUPERFAMILY SSF46977 425 527 2.88E-31 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS14965 41c18ec6860cbd36aedea0d5476c2713 207 Gene3D G3DSA:3.40.50.360 2 206 1.0E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS14965 41c18ec6860cbd36aedea0d5476c2713 207 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 202 28.609 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DDI_RS14965 41c18ec6860cbd36aedea0d5476c2713 207 Pfam PF02525 Flavodoxin-like fold 2 199 2.8E-41 T 28-03-2018 IPR003680 Flavodoxin-like fold DDI_RS14965 41c18ec6860cbd36aedea0d5476c2713 207 SUPERFAMILY SSF52218 2 203 1.51E-44 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS04655 744576b5b9269f2d12d467f4e44bbcb8 273 SMART SM00062 35 267 2.6E-45 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS04655 744576b5b9269f2d12d467f4e44bbcb8 273 Gene3D G3DSA:3.40.190.10 167 270 1.0E-11 T 28-03-2018 DDI_RS04655 744576b5b9269f2d12d467f4e44bbcb8 273 Gene3D G3DSA:3.40.190.10 6 161 3.5E-35 T 28-03-2018 DDI_RS04655 744576b5b9269f2d12d467f4e44bbcb8 273 SMART SM00079 33 266 0.0049 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DDI_RS04655 744576b5b9269f2d12d467f4e44bbcb8 273 SUPERFAMILY SSF53850 1 268 1.81E-57 T 28-03-2018 DDI_RS04655 744576b5b9269f2d12d467f4e44bbcb8 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 266 1.1E-51 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS04655 744576b5b9269f2d12d467f4e44bbcb8 273 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS02655 7816e96d297ada8005bffe83a6f808d3 508 Pfam PF13347 MFS/sugar transport protein 12 441 5.7E-51 T 28-03-2018 DDI_RS02655 7816e96d297ada8005bffe83a6f808d3 508 Gene3D G3DSA:1.20.1250.20 223 449 1.1E-9 T 28-03-2018 DDI_RS02655 7816e96d297ada8005bffe83a6f808d3 508 SUPERFAMILY SSF103473 10 439 7.5E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS02655 7816e96d297ada8005bffe83a6f808d3 508 Gene3D G3DSA:1.20.1250.20 4 218 8.8E-14 T 28-03-2018 DDI_RS13590 94015e1c4da3a95ec7dcd53b39479413 685 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 1.0E-63 T 28-03-2018 IPR022161 DNA helicase IV, N-terminal domain DDI_RS13590 94015e1c4da3a95ec7dcd53b39479413 685 Gene3D G3DSA:3.40.50.300 196 490 3.2E-45 T 28-03-2018 DDI_RS13590 94015e1c4da3a95ec7dcd53b39479413 685 SUPERFAMILY SSF52540 195 348 1.2E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13590 94015e1c4da3a95ec7dcd53b39479413 685 SUPERFAMILY SSF52540 385 675 1.2E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13590 94015e1c4da3a95ec7dcd53b39479413 685 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 9.5E-41 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DDI_RS13590 94015e1c4da3a95ec7dcd53b39479413 685 Gene3D G3DSA:3.40.50.300 491 683 1.1E-26 T 28-03-2018 DDI_RS13590 94015e1c4da3a95ec7dcd53b39479413 685 Pfam PF13361 UvrD-like helicase C-terminal domain 521 661 4.9E-13 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DDI_RS17670 fb9a699c76c5b4d0844b5c693984e32c 190 SUPERFAMILY SSF47413 14 80 1.07E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS17670 fb9a699c76c5b4d0844b5c693984e32c 190 Gene3D G3DSA:1.10.260.40 1 95 1.3E-19 T 28-03-2018 DDI_RS17670 fb9a699c76c5b4d0844b5c693984e32c 190 SMART SM00530 20 75 3.7E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS17670 fb9a699c76c5b4d0844b5c693984e32c 190 Gene3D G3DSA:2.60.120.10 96 188 4.9E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS17670 fb9a699c76c5b4d0844b5c693984e32c 190 Pfam PF07883 Cupin domain 115 180 4.7E-7 T 28-03-2018 IPR013096 Cupin 2, conserved barrel DDI_RS17670 fb9a699c76c5b4d0844b5c693984e32c 190 Pfam PF01381 Helix-turn-helix 21 75 4.8E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS17670 fb9a699c76c5b4d0844b5c693984e32c 190 SUPERFAMILY SSF51182 104 185 3.61E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS05535 42e48240ccb4f14aa17032a6b4ce13ba 504 Gene3D G3DSA:3.40.190.10 147 282 7.3E-44 T 28-03-2018 DDI_RS05535 42e48240ccb4f14aa17032a6b4ce13ba 504 Gene3D G3DSA:3.90.76.10 52 146 7.1E-29 T 28-03-2018 DDI_RS05535 42e48240ccb4f14aa17032a6b4ce13ba 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 418 3.9E-95 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS05535 42e48240ccb4f14aa17032a6b4ce13ba 504 PIRSF PIRSF002741 11 503 1.1E-113 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS05535 42e48240ccb4f14aa17032a6b4ce13ba 504 Gene3D G3DSA:3.10.105.10 283 474 5.2E-48 T 28-03-2018 DDI_RS05535 42e48240ccb4f14aa17032a6b4ce13ba 504 SUPERFAMILY SSF53850 24 501 5.96E-134 T 28-03-2018 DDI_RS04310 eca2a7edad44d399b8f3d22bf93e745b 231 Gene3D G3DSA:3.40.50.620 1 231 8.0E-53 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS04310 eca2a7edad44d399b8f3d22bf93e745b 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 7.9E-85 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DDI_RS04310 eca2a7edad44d399b8f3d22bf93e745b 231 SUPERFAMILY SSF52402 2 220 4.63E-70 T 28-03-2018 DDI_RS04310 eca2a7edad44d399b8f3d22bf93e745b 231 Pfam PF06508 Queuosine biosynthesis protein QueC 4 213 5.0E-83 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DDI_RS04310 eca2a7edad44d399b8f3d22bf93e745b 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.155 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DDI_RS04310 eca2a7edad44d399b8f3d22bf93e745b 231 PIRSF PIRSF006293 1 225 6.6E-82 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 PRINTS PR00112 Acylphosphatase signature 61 81 2.0E-8 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 PRINTS PR00112 Acylphosphatase signature 5 20 2.0E-8 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 PRINTS PR00112 Acylphosphatase signature 26 51 2.0E-8 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 SUPERFAMILY SSF54975 2 92 8.07E-31 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 28.637 T 28-03-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 Gene3D G3DSA:3.30.70.100 1 92 2.9E-30 T 28-03-2018 DDI_RS13565 0316c27b86efc552020bd520b82e8c36 92 Pfam PF00708 Acylphosphatase 8 90 9.9E-26 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDI_RS19945 f5ed7790c1b7b4baefabf32235e6472b 622 Pfam PF02705 K+ potassium transporter 14 544 1.5E-207 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 DDI_RS19945 f5ed7790c1b7b4baefabf32235e6472b 622 TIGRFAM TIGR00794 kup: potassium uptake protein 95 550 3.0E-185 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 DDI_RS19945 f5ed7790c1b7b4baefabf32235e6472b 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.468 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup DDI_RS04135 0cd336cc2666570be04905ac1428b13d 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.9E-37 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain DDI_RS04135 0cd336cc2666570be04905ac1428b13d 615 Pfam PF02355 Protein export membrane protein 433 601 6.9E-15 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DDI_RS04135 0cd336cc2666570be04905ac1428b13d 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 5.5E-146 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DDI_RS04135 0cd336cc2666570be04905ac1428b13d 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 1.2E-83 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDI_RS04135 0cd336cc2666570be04905ac1428b13d 615 Gene3D G3DSA:1.20.1640.10 378 607 1.8E-30 T 28-03-2018 DDI_RS04135 0cd336cc2666570be04905ac1428b13d 615 Pfam PF07549 SecD/SecF GG Motif 120 140 4.4E-6 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DDI_RS04135 0cd336cc2666570be04905ac1428b13d 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 49.351 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DDI_RS04135 0cd336cc2666570be04905ac1428b13d 615 SUPERFAMILY SSF82866 410 606 4.97E-40 T 28-03-2018 DDI_RS11970 4f3d281995631e28820752d264ed99bc 486 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 26 121 2.0E-16 T 28-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DDI_RS11970 4f3d281995631e28820752d264ed99bc 486 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 232 468 1.1E-58 T 28-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 DDI_RS11970 4f3d281995631e28820752d264ed99bc 486 Pfam PF07196 Flagellin hook IN motif 146 202 1.8E-9 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DDI_RS00340 d509b16a769f2ad51d9e8e582e2d85f0 165 Pfam PF04386 Stringent starvation protein B 9 165 2.9E-44 T 28-03-2018 IPR007481 Stringent starvation protein B DDI_RS00340 d509b16a769f2ad51d9e8e582e2d85f0 165 Gene3D G3DSA:2.30.30.220 10 107 2.5E-42 T 28-03-2018 IPR007481 Stringent starvation protein B DDI_RS00340 d509b16a769f2ad51d9e8e582e2d85f0 165 PIRSF PIRSF005276 3 165 2.4E-61 T 28-03-2018 IPR007481 Stringent starvation protein B DDI_RS00340 d509b16a769f2ad51d9e8e582e2d85f0 165 SUPERFAMILY SSF101738 4 119 2.09E-49 T 28-03-2018 IPR007481 Stringent starvation protein B DDI_RS09480 2cf17f9f900dab0373f1f5bd8f4e1a25 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 262 7.0E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09480 2cf17f9f900dab0373f1f5bd8f4e1a25 277 SUPERFAMILY SSF161098 8 265 8.76E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09480 2cf17f9f900dab0373f1f5bd8f4e1a25 277 Gene3D G3DSA:1.10.3720.10 1 263 4.3E-37 T 28-03-2018 DDI_RS10985 033be1c6179bc0ac8d50960c7ecbb9bd 470 Gene3D G3DSA:1.20.1250.20 7 201 3.3E-28 T 28-03-2018 DDI_RS10985 033be1c6179bc0ac8d50960c7ecbb9bd 470 Gene3D G3DSA:1.20.1250.20 262 462 2.9E-16 T 28-03-2018 DDI_RS10985 033be1c6179bc0ac8d50960c7ecbb9bd 470 Pfam PF07690 Major Facilitator Superfamily 19 416 4.7E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS10985 033be1c6179bc0ac8d50960c7ecbb9bd 470 SUPERFAMILY SSF103473 16 207 3.58E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS10985 033be1c6179bc0ac8d50960c7ecbb9bd 470 SUPERFAMILY SSF103473 252 454 3.58E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.7E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 Gene3D G3DSA:3.50.50.60 129 240 3.3E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 SUPERFAMILY SSF51905 1 313 1.99E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 8.0E-123 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 Gene3D G3DSA:3.50.50.60 256 317 2.3E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 Gene3D G3DSA:3.50.50.60 1 128 4.0E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.0E-40 T 28-03-2018 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.0E-40 T 28-03-2018 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.0E-40 T 28-03-2018 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.0E-40 T 28-03-2018 DDI_RS08095 e2baa46aef27144e67c73b6f3b0dfccd 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.0E-40 T 28-03-2018 DDI_RS17055 45ba2a2b1d7f06d0c25a11fc3dcab7ca 439 Pfam PF07690 Major Facilitator Superfamily 59 363 4.4E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS17055 45ba2a2b1d7f06d0c25a11fc3dcab7ca 439 Gene3D G3DSA:1.20.1250.20 237 435 1.8E-20 T 28-03-2018 DDI_RS17055 45ba2a2b1d7f06d0c25a11fc3dcab7ca 439 SUPERFAMILY SSF103473 13 424 1.44E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS17055 45ba2a2b1d7f06d0c25a11fc3dcab7ca 439 Gene3D G3DSA:1.20.1250.20 14 229 4.7E-25 T 28-03-2018 DDI_RS00975 bc5e1cb3d3f341f524bf7542c6d302fb 263 SMART SM00420 14 66 5.6E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS00975 bc5e1cb3d3f341f524bf7542c6d302fb 263 Gene3D G3DSA:3.40.50.1360 81 249 2.1E-33 T 28-03-2018 DDI_RS00975 bc5e1cb3d3f341f524bf7542c6d302fb 263 Gene3D G3DSA:1.10.10.10 1 68 1.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00975 bc5e1cb3d3f341f524bf7542c6d302fb 263 Pfam PF08220 DeoR-like helix-turn-helix domain 14 68 3.6E-16 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDI_RS00975 bc5e1cb3d3f341f524bf7542c6d302fb 263 SUPERFAMILY SSF100950 82 244 3.14E-23 T 28-03-2018 DDI_RS00975 bc5e1cb3d3f341f524bf7542c6d302fb 263 SMART SM01134 81 243 3.2E-57 T 28-03-2018 DDI_RS00975 bc5e1cb3d3f341f524bf7542c6d302fb 263 Pfam PF00455 DeoR C terminal sensor domain 83 241 1.1E-42 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain DDI_RS00975 bc5e1cb3d3f341f524bf7542c6d302fb 263 SUPERFAMILY SSF46785 11 69 3.15E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Pfam PF16330 MukB hinge domain 645 810 2.0E-76 T 28-03-2018 IPR032520 MukB, hinge domain DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 PIRSF PIRSF005246 1 1479 0.0 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 1.1E-14 T 28-03-2018 DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 SUPERFAMILY SSF52540 22 224 7.83E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 SUPERFAMILY SSF52540 1268 1433 1.53E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 SUPERFAMILY SSF52540 21 55 1.53E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.035 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Gene3D G3DSA:1.20.120.330 713 1051 0.042 T 28-03-2018 DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Gene3D G3DSA:1.20.5.730 1052 1149 0.0023 T 28-03-2018 DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Gene3D G3DSA:3.40.50.300 1150 1436 7.4E-5 T 28-03-2018 DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Gene3D G3DSA:3.40.50.300 5 492 2.6E-12 T 28-03-2018 DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Gene3D G3DSA:1.20.120.570 503 679 1.1E-5 T 28-03-2018 DDI_RS08400 8ea23a4cb3e9e47e8a1632d41bf4a822 1479 Pfam PF04310 MukB N-terminal 2 227 2.2E-123 T 28-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DDI_RS13720 66b98e8023b17f061240388bb47da1ba 241 Gene3D G3DSA:3.40.50.300 1 234 1.2E-69 T 28-03-2018 DDI_RS13720 66b98e8023b17f061240388bb47da1ba 241 Pfam PF00005 ABC transporter 19 167 2.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS13720 66b98e8023b17f061240388bb47da1ba 241 SMART SM00382 28 228 5.4E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS13720 66b98e8023b17f061240388bb47da1ba 241 SUPERFAMILY SSF52540 3 227 9.38E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13720 66b98e8023b17f061240388bb47da1ba 241 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS15355 7dd563aafc6ecb5d42adf5beca034cdb 188 PIRSF PIRSF004682 1 188 3.5E-68 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DDI_RS15355 7dd563aafc6ecb5d42adf5beca034cdb 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 156 1.3E-42 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DDI_RS15355 7dd563aafc6ecb5d42adf5beca034cdb 188 SUPERFAMILY SSF56784 3 185 1.24E-53 T 28-03-2018 IPR023214 HAD-like domain DDI_RS15355 7dd563aafc6ecb5d42adf5beca034cdb 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 155 1.2E-40 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DDI_RS15355 7dd563aafc6ecb5d42adf5beca034cdb 188 Pfam PF13242 HAD-hyrolase-like 109 178 1.6E-13 T 28-03-2018 DDI_RS15355 7dd563aafc6ecb5d42adf5beca034cdb 188 Gene3D G3DSA:3.40.50.1000 5 187 9.1E-34 T 28-03-2018 IPR023214 HAD-like domain DDI_RS15355 7dd563aafc6ecb5d42adf5beca034cdb 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 3.4E-92 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 Pfam PF08448 PAS fold 150 261 4.0E-17 T 28-03-2018 IPR013656 PAS fold-4 DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 SMART SM00387 394 487 8.5E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 SUPERFAMILY SSF55785 129 260 5.06E-19 T 28-03-2018 IPR000014 PAS domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 Pfam PF07730 Histidine kinase 290 356 4.5E-17 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 Pfam PF13426 PAS domain 31 131 4.4E-6 T 28-03-2018 IPR000014 PAS domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 SMART SM00091 20 89 14.0 T 28-03-2018 IPR000014 PAS domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 SMART SM00091 144 211 4.2E-9 T 28-03-2018 IPR000014 PAS domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 SUPERFAMILY SSF55785 25 132 6.28E-14 T 28-03-2018 IPR000014 PAS domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 Gene3D G3DSA:3.30.450.20 127 293 1.3E-24 T 28-03-2018 DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 SUPERFAMILY SSF55874 371 484 1.7E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 Gene3D G3DSA:3.30.565.10 350 488 8.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 137 7.7E-10 T 28-03-2018 IPR000014 PAS domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 269 6.2E-9 T 28-03-2018 IPR000014 PAS domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 486 1.2E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10325 36cb40c7e4a2fc7e6ca308749d5b0983 488 Gene3D G3DSA:3.30.450.20 20 126 1.7E-10 T 28-03-2018 DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 Gene3D G3DSA:2.40.50.100 240 288 4.0E-10 T 28-03-2018 DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 Pfam PF00005 ABC transporter 21 162 6.3E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 SMART SM00382 29 212 2.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 Pfam PF08402 TOBE domain 278 348 3.7E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 SUPERFAMILY SSF52540 4 242 4.88E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 Gene3D G3DSA:3.40.50.300 1 238 4.4E-70 T 28-03-2018 DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 Gene3D G3DSA:2.40.50.140 289 341 7.2E-14 T 28-03-2018 DDI_RS19255 a107bde8c5d78a4228a722b180809c87 358 SUPERFAMILY SSF50331 237 356 1.73E-27 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS13540 4259eef7ad3ed04676f85f3b9ac9881b 120 Pfam PF13811 Domain of unknown function (DUF4186) 5 113 9.5E-52 T 28-03-2018 IPR020378 Protein of unknown function DUF4186 DDI_RS13540 4259eef7ad3ed04676f85f3b9ac9881b 120 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 22 112 1.0E-35 T 28-03-2018 IPR020378 Protein of unknown function DUF4186 DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 321 2.4E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 SMART SM00387 368 480 7.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 Gene3D G3DSA:3.30.565.10 330 482 1.5E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 478 1.1E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 SMART SM00388 257 325 2.7E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 5.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 5.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 5.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 Gene3D G3DSA:1.10.287.130 262 321 1.0E-12 T 28-03-2018 DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 SUPERFAMILY SSF55874 330 478 3.67E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 Gene3D G3DSA:3.30.450.20 199 261 6.4E-4 T 28-03-2018 DDI_RS14195 340371af6b21e4d2e0c5ec0da96f22e0 482 SUPERFAMILY SSF47384 240 321 6.08E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS09360 ecf2e0d6a44cda8f1e6084042e499e17 334 Pfam PF01757 Acyltransferase family 3 321 2.5E-31 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 DDI_RS15195 73baaac83f61c5c2edc84a667c905168 279 SUPERFAMILY SSF46689 2 79 7.53E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS15195 73baaac83f61c5c2edc84a667c905168 279 Gene3D G3DSA:3.40.50.10490 120 258 9.2E-14 T 28-03-2018 DDI_RS15195 73baaac83f61c5c2edc84a667c905168 279 Pfam PF01380 SIS domain 124 244 4.3E-8 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS15195 73baaac83f61c5c2edc84a667c905168 279 Gene3D G3DSA:1.10.10.10 1 119 1.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15195 73baaac83f61c5c2edc84a667c905168 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 72 6.8E-14 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DDI_RS15195 73baaac83f61c5c2edc84a667c905168 279 SUPERFAMILY SSF53697 94 254 4.0E-13 T 28-03-2018 DDI_RS11955 56479b44019efcba77831ae80582b261 374 PIRSF PIRSF000390 1 372 2.7E-106 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DDI_RS11955 56479b44019efcba77831ae80582b261 374 Gene3D G3DSA:3.90.1150.10 236 374 8.5E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS11955 56479b44019efcba77831ae80582b261 374 Gene3D G3DSA:3.40.640.10 15 235 4.2E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS11955 56479b44019efcba77831ae80582b261 374 SUPERFAMILY SSF53383 4 369 3.75E-101 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS11955 56479b44019efcba77831ae80582b261 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 365 9.0E-99 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 PIRSF PIRSF000102 1 312 1.6E-57 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 58.813 T 28-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.1E-49 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 5.1E-44 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 SUPERFAMILY SSF51735 1 145 2.51E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.0E-134 T 28-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 SUPERFAMILY SSF56327 146 311 4.79E-40 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 Gene3D G3DSA:3.40.50.720 2 147 6.7E-38 T 28-03-2018 DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 Gene3D G3DSA:3.90.110.10 148 313 1.6E-41 T 28-03-2018 DDI_RS02040 ecaafbfd8d8aa70274efe1c2ed3d01d1 313 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 28-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 DDI_RS19530 5ac5dd499c76095ac8ca2df85bd63163 447 PIRSF PIRSF005348 11 447 5.7E-160 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 DDI_RS19530 5ac5dd499c76095ac8ca2df85bd63163 447 Pfam PF03390 2-hydroxycarboxylate transporter family 31 440 3.5E-148 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 DDI_RS18125 8946683905823d032674c7d2b6db9995 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.341 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DDI_RS18125 8946683905823d032674c7d2b6db9995 156 PIRSF PIRSF002122 3 156 3.7E-63 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DDI_RS18125 8946683905823d032674c7d2b6db9995 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.9E-65 T 28-03-2018 IPR023798 Ribosomal protein S7 domain DDI_RS18125 8946683905823d032674c7d2b6db9995 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.0E-71 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DDI_RS18125 8946683905823d032674c7d2b6db9995 156 Gene3D G3DSA:1.10.455.10 6 156 1.8E-61 T 28-03-2018 IPR023798 Ribosomal protein S7 domain DDI_RS18125 8946683905823d032674c7d2b6db9995 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18125 8946683905823d032674c7d2b6db9995 156 SUPERFAMILY SSF47973 6 149 6.8E-60 T 28-03-2018 IPR023798 Ribosomal protein S7 domain DDI_RS00715 7192136f0f81363d5aa16be648351580 142 Pfam PF06877 Regulator of ribonuclease activity B 12 113 9.2E-34 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain DDI_RS00715 7192136f0f81363d5aa16be648351580 142 PIRSF PIRSF018193 1 142 7.0E-66 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B DDI_RS00715 7192136f0f81363d5aa16be648351580 142 SUPERFAMILY SSF89946 3 123 4.05E-40 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain DDI_RS00715 7192136f0f81363d5aa16be648351580 142 Gene3D G3DSA:3.30.70.970 3 116 1.5E-40 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain DDI_RS00715 7192136f0f81363d5aa16be648351580 142 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.887 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B DDI_RS11810 50eff5cba4155971e3d8a033e6f554a2 80 Gene3D G3DSA:3.30.910.10 1 76 1.2E-31 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like DDI_RS11810 50eff5cba4155971e3d8a033e6f554a2 80 Pfam PF06183 DinI-like family 14 76 5.4E-28 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like DDI_RS11810 50eff5cba4155971e3d8a033e6f554a2 80 SUPERFAMILY SSF54857 1 77 2.22E-27 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like DDI_RS15305 8f4b076618f32ce692e241e253d602c1 451 Gene3D G3DSA:3.30.870.10 246 414 2.2E-17 T 28-03-2018 DDI_RS15305 8f4b076618f32ce692e241e253d602c1 451 Pfam PF13091 PLD-like domain 262 402 2.3E-20 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DDI_RS15305 8f4b076618f32ce692e241e253d602c1 451 SUPERFAMILY SSF56024 252 404 3.77E-18 T 28-03-2018 DDI_RS15305 8f4b076618f32ce692e241e253d602c1 451 PIRSF PIRSF000850 1 451 4.7E-234 T 28-03-2018 DDI_RS15305 8f4b076618f32ce692e241e253d602c1 451 SMART SM00155 352 379 0.025 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DDI_RS15305 8f4b076618f32ce692e241e253d602c1 451 SMART SM00155 133 159 0.0053 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DDI_RS15305 8f4b076618f32ce692e241e253d602c1 451 Gene3D G3DSA:3.30.870.10 15 220 1.4E-16 T 28-03-2018 DDI_RS15305 8f4b076618f32ce692e241e253d602c1 451 SUPERFAMILY SSF56024 10 204 1.88E-25 T 28-03-2018 DDI_RS03215 ec11920ef0640195871849730de9c56c 361 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 5 359 1.1E-168 T 28-03-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 DDI_RS03215 ec11920ef0640195871849730de9c56c 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DDI_RS03215 ec11920ef0640195871849730de9c56c 361 SMART SM01329 7 355 1.2E-176 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DDI_RS03215 ec11920ef0640195871849730de9c56c 361 Gene3D G3DSA:3.40.718.10 214 360 1.9E-52 T 28-03-2018 DDI_RS03215 ec11920ef0640195871849730de9c56c 361 Gene3D G3DSA:3.40.718.10 1 213 7.9E-63 T 28-03-2018 DDI_RS03215 ec11920ef0640195871849730de9c56c 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 8 355 8.0E-86 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DDI_RS03215 ec11920ef0640195871849730de9c56c 361 SUPERFAMILY SSF53659 5 358 7.87E-115 T 28-03-2018 DDI_RS14640 47374defa8aadb6f968ec191f88a0361 251 PIRSF PIRSF005457 1 251 1.1E-88 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DDI_RS14640 47374defa8aadb6f968ec191f88a0361 251 SUPERFAMILY SSF56281 1 251 6.16E-66 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS14640 47374defa8aadb6f968ec191f88a0361 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 1.8E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS14640 47374defa8aadb6f968ec191f88a0361 251 SMART SM00849 11 165 9.8E-34 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS14640 47374defa8aadb6f968ec191f88a0361 251 Gene3D G3DSA:3.60.15.10 1 251 1.1E-64 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS14640 47374defa8aadb6f968ec191f88a0361 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 2.1E-102 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DDI_RS14640 47374defa8aadb6f968ec191f88a0361 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.586 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DDI_RS14640 47374defa8aadb6f968ec191f88a0361 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 3.4E-23 T 28-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DDI_RS01050 ed21d9c9770886936201c6e0e3bbff14 308 Gene3D G3DSA:1.10.3720.10 26 296 1.7E-39 T 28-03-2018 DDI_RS01050 ed21d9c9770886936201c6e0e3bbff14 308 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 77 1.3E-7 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS01050 ed21d9c9770886936201c6e0e3bbff14 308 SUPERFAMILY SSF161098 101 290 3.01E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01050 ed21d9c9770886936201c6e0e3bbff14 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 300 3.6E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09455 adbaea4b10ec442e7f4221d9399048e6 612 SUPERFAMILY SSF51905 259 376 1.54E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS09455 adbaea4b10ec442e7f4221d9399048e6 612 SUPERFAMILY SSF51905 12 213 1.54E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS09455 adbaea4b10ec442e7f4221d9399048e6 612 SUPERFAMILY SSF51905 541 605 1.54E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS09455 adbaea4b10ec442e7f4221d9399048e6 612 Pfam PF05199 GMC oxidoreductase 462 593 6.6E-15 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DDI_RS09455 adbaea4b10ec442e7f4221d9399048e6 612 Pfam PF13450 NAD(P)-binding Rossmann-like domain 18 47 4.7E-5 T 28-03-2018 DDI_RS09455 adbaea4b10ec442e7f4221d9399048e6 612 Gene3D G3DSA:3.50.50.60 7 607 5.1E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS13105 28944a71dba60a6e4fa3326b5bff67d6 190 SUPERFAMILY SSF53474 18 182 7.45E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS13105 28944a71dba60a6e4fa3326b5bff67d6 190 Gene3D G3DSA:3.40.50.1820 8 187 1.4E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS13105 28944a71dba60a6e4fa3326b5bff67d6 190 Pfam PF06821 Serine hydrolase 19 180 1.9E-57 T 28-03-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 Gene3D G3DSA:3.30.70.20 19 64 1.9E-9 T 28-03-2018 DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 Gene3D G3DSA:3.30.70.20 1 18 0.0096 T 28-03-2018 DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 Gene3D G3DSA:3.30.70.20 155 189 0.033 T 28-03-2018 DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 Pfam PF12798 4Fe-4S binding domain 147 167 0.06 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 Gene3D G3DSA:3.30.70.20 65 91 6.3E-17 T 28-03-2018 DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 Pfam PF12800 4Fe-4S binding domain 10 23 0.047 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 SUPERFAMILY SSF54862 1 101 3.6E-41 T 28-03-2018 DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 SUPERFAMILY SSF54862 140 188 3.6E-41 T 28-03-2018 DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 Pfam PF13247 4Fe-4S dicluster domain 48 97 7.2E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS05915 39736f9be144e2d52d68cc2e6d0b3760 208 Gene3D G3DSA:3.30.70.20 92 154 4.6E-12 T 28-03-2018 DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 SUPERFAMILY SSF47823 5 100 4.51E-36 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 SUPERFAMILY SSF56349 107 297 1.24E-58 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 Gene3D G3DSA:1.10.443.10 114 292 5.9E-51 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 Pfam PF00589 Phage integrase family 113 285 4.3E-56 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 8.1E-119 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 Gene3D G3DSA:1.10.150.130 5 113 2.6E-23 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 64.604 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 299 58.612 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD DDI_RS02385 8f690804f5330e117a5e789545943bd8 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 1.3E-26 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 Pfam PF00575 S1 RNA binding domain 36 118 3.0E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 SUPERFAMILY SSF50249 40 124 1.61E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1014 1049 3.7E-17 T 28-03-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 Pfam PF10150 Ribonuclease E/G family 121 391 1.5E-91 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 Gene3D G3DSA:2.40.50.140 33 124 1.7E-31 T 28-03-2018 DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 SMART SM00316 37 119 4.0E-12 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 Hamap MF_00970 Ribonuclease E [rne]. 1 1039 37.16 T 28-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 Gene3D G3DSA:2.10.110.10 394 642 0.21 T 28-03-2018 DDI_RS11795 3b399a4a7078f910d0fd312b76b46bcc 1051 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 2.9E-169 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DDI_RS07480 d09f783174193e10de0af8d126bb411c 519 PIRSF PIRSF002741 2 518 7.9E-112 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS07480 d09f783174193e10de0af8d126bb411c 519 Gene3D G3DSA:3.90.76.10 43 188 1.3E-33 T 28-03-2018 DDI_RS07480 d09f783174193e10de0af8d126bb411c 519 SUPERFAMILY SSF53850 29 514 6.52E-120 T 28-03-2018 DDI_RS07480 d09f783174193e10de0af8d126bb411c 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 436 1.1E-83 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS07480 d09f783174193e10de0af8d126bb411c 519 Gene3D G3DSA:3.10.105.10 283 489 3.2E-46 T 28-03-2018 DDI_RS07480 d09f783174193e10de0af8d126bb411c 519 Gene3D G3DSA:3.40.190.10 189 282 7.4E-24 T 28-03-2018 DDI_RS04975 f546392527188b14238c6a56afaed181 488 Pfam PF00367 phosphotransferase system, EIIB 416 447 6.3E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS04975 f546392527188b14238c6a56afaed181 488 SUPERFAMILY SSF55604 412 485 8.5E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS04975 f546392527188b14238c6a56afaed181 488 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 425 442 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS04975 f546392527188b14238c6a56afaed181 488 Pfam PF02378 Phosphotransferase system, EIIC 12 324 3.2E-77 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS04975 f546392527188b14238c6a56afaed181 488 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 472 4.1E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS04975 f546392527188b14238c6a56afaed181 488 Gene3D G3DSA:3.30.1360.60 410 485 4.1E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS04975 f546392527188b14238c6a56afaed181 488 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 4 483 1.2E-202 T 28-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 SUPERFAMILY SSF58104 249 517 7.06E-69 T 28-03-2018 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 SMART SM00283 269 516 1.5E-91 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 6.1E-21 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 Gene3D G3DSA:1.10.287.950 330 520 4.9E-46 T 28-03-2018 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 Gene3D G3DSA:1.20.120.30 25 185 9.0E-16 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 9.2E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 9.2E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 9.2E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 9.2E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 Gene3D G3DSA:1.10.287.1060 244 329 0.015 T 28-03-2018 DDI_RS19285 43a36fbbf8fa331bff706226e053ed1a 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 6.1E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15425 817ecb5510a3e6ec1032646f65516036 117 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 117 7.0E-21 T 28-03-2018 IPR022721 Protein of unknown function DUF3561 DDI_RS15425 817ecb5510a3e6ec1032646f65516036 117 Pfam PF12084 Protein of unknown function (DUF3561) 31 116 2.6E-30 T 28-03-2018 IPR022721 Protein of unknown function DUF3561 DDI_RS07075 b6b326882b13f5ac8160260f829670dc 739 Gene3D G3DSA:2.60.120.260 360 497 4.9E-22 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS07075 b6b326882b13f5ac8160260f829670dc 739 SUPERFAMILY SSF49785 360 486 9.92E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS07075 b6b326882b13f5ac8160260f829670dc 739 Pfam PF00754 F5/8 type C domain 364 490 5.9E-13 T 28-03-2018 IPR000421 Coagulation factor 5/8 C-terminal domain DDI_RS13965 a68c28ea4dba55fc84fc38068f986870 273 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 6 97 1.1E-25 T 28-03-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain DDI_RS13965 a68c28ea4dba55fc84fc38068f986870 273 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 102 265 2.2E-37 T 28-03-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system DDI_RS00160 af1f68bf72e3cc946e852e569f076ecc 481 SUPERFAMILY SSF111283 18 480 2.88E-131 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DDI_RS00160 af1f68bf72e3cc946e852e569f076ecc 481 Gene3D G3DSA:3.30.2290.10 12 240 1.7E-57 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain DDI_RS00160 af1f68bf72e3cc946e852e569f076ecc 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 7.8E-69 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DDI_RS00160 af1f68bf72e3cc946e852e569f076ecc 481 PIRSF PIRSF004919 14 481 1.0E-145 T 28-03-2018 IPR025502 TldD DDI_RS16790 38c91f5c59244c978253086852fc3347 572 Gene3D G3DSA:3.40.50.970 355 556 9.2E-51 T 28-03-2018 DDI_RS16790 38c91f5c59244c978253086852fc3347 572 Gene3D G3DSA:3.40.50.1220 200 354 2.2E-55 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS16790 38c91f5c59244c978253086852fc3347 572 Gene3D G3DSA:3.40.50.970 1 199 5.1E-67 T 28-03-2018 DDI_RS16790 38c91f5c59244c978253086852fc3347 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 329 4.9E-47 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DDI_RS16790 38c91f5c59244c978253086852fc3347 572 SUPERFAMILY SSF52467 188 362 4.58E-64 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS16790 38c91f5c59244c978253086852fc3347 572 SUPERFAMILY SSF52518 371 565 2.21E-67 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS16790 38c91f5c59244c978253086852fc3347 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DDI_RS16790 38c91f5c59244c978253086852fc3347 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 543 3.6E-50 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDI_RS16790 38c91f5c59244c978253086852fc3347 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 567 4.9E-279 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDI_RS16790 38c91f5c59244c978253086852fc3347 572 SUPERFAMILY SSF52518 2 176 7.02E-66 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS16790 38c91f5c59244c978253086852fc3347 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 5.2E-60 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDI_RS09770 a86680e5222ae2fcbd526c29c64712ff 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 40.848 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 DDI_RS09770 a86680e5222ae2fcbd526c29c64712ff 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 1.5E-7 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DDI_RS09770 a86680e5222ae2fcbd526c29c64712ff 148 PIRSF PIRSF006173 1 145 1.6E-64 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 DDI_RS07460 51713c46d29d25cca301e32b8fd04859 422 Gene3D G3DSA:1.20.1600.10 84 198 2.0E-4 T 28-03-2018 DDI_RS07460 51713c46d29d25cca301e32b8fd04859 422 SUPERFAMILY SSF111369 56 148 5.23E-6 T 28-03-2018 DDI_RS07460 51713c46d29d25cca301e32b8fd04859 422 Gene3D G3DSA:2.40.50.100 23 83 2.4E-5 T 28-03-2018 DDI_RS07460 51713c46d29d25cca301e32b8fd04859 422 Gene3D G3DSA:1.20.1600.10 199 332 3.7E-9 T 28-03-2018 DDI_RS07460 51713c46d29d25cca301e32b8fd04859 422 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 176 315 2.2E-8 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS07460 51713c46d29d25cca301e32b8fd04859 422 Pfam PF13533 Biotin-lipoyl like 67 111 1.6E-7 T 28-03-2018 DDI_RS11245 536776976ab9fad147c5137b7ed89089 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 4.5E-97 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS11245 536776976ab9fad147c5137b7ed89089 383 Gene3D G3DSA:3.40.50.150 105 372 1.1E-61 T 28-03-2018 DDI_RS11245 536776976ab9fad147c5137b7ed89089 383 PIRSF PIRSF003085 2 378 2.0E-122 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 DDI_RS11245 536776976ab9fad147c5137b7ed89089 383 SUPERFAMILY SSF53335 31 327 4.49E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 Pfam PF01938 TRAM domain 11 66 1.3E-10 T 28-03-2018 IPR002792 TRAM domain DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 268 433 1.6E-21 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 Gene3D G3DSA:3.40.50.150 83 436 1.8E-53 T 28-03-2018 DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 430 1.4E-136 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 369 399 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 SUPERFAMILY SSF50249 2 66 1.6E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 420 430 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 Gene3D G3DSA:2.40.50.140 1 82 6.9E-28 T 28-03-2018 DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 438 63.542 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 DDI_RS15520 616868295e8ee78a7059c2346f27b246 444 SUPERFAMILY SSF53335 75 435 1.21E-80 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS00985 988756e1026bc7608a32f9dc97e5d27c 306 SUPERFAMILY SSF52518 4 169 1.46E-39 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS00985 988756e1026bc7608a32f9dc97e5d27c 306 SUPERFAMILY SSF52922 173 298 2.36E-17 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS00985 988756e1026bc7608a32f9dc97e5d27c 306 SMART SM00861 2 167 1.5E-32 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDI_RS00985 988756e1026bc7608a32f9dc97e5d27c 306 Pfam PF02779 Transketolase, pyrimidine binding domain 3 165 2.0E-25 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDI_RS00985 988756e1026bc7608a32f9dc97e5d27c 306 Gene3D G3DSA:3.40.50.970 1 176 2.8E-34 T 28-03-2018 DDI_RS00985 988756e1026bc7608a32f9dc97e5d27c 306 Gene3D G3DSA:3.40.50.920 178 302 3.1E-20 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS00985 988756e1026bc7608a32f9dc97e5d27c 306 Pfam PF02780 Transketolase, C-terminal domain 181 291 6.5E-14 T 28-03-2018 IPR033248 Transketolase, C-terminal domain DDI_RS03945 b8702d83911c895c1da768ed6d1d420e 228 Gene3D G3DSA:1.10.150.240 20 75 3.2E-5 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 DDI_RS03945 b8702d83911c895c1da768ed6d1d420e 228 SUPERFAMILY SSF56784 5 217 6.67E-49 T 28-03-2018 IPR023214 HAD-like domain DDI_RS03945 b8702d83911c895c1da768ed6d1d420e 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.3E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS03945 b8702d83911c895c1da768ed6d1d420e 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 3.3E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS03945 b8702d83911c895c1da768ed6d1d420e 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 3.3E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS03945 b8702d83911c895c1da768ed6d1d420e 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 89 180 3.5E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS03945 b8702d83911c895c1da768ed6d1d420e 228 Gene3D G3DSA:3.40.50.1000 76 224 2.3E-28 T 28-03-2018 IPR023214 HAD-like domain DDI_RS03945 b8702d83911c895c1da768ed6d1d420e 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 185 1.7E-29 T 28-03-2018 IPR023214 HAD-like domain DDI_RS10440 14289560d795fe65ae3227586acffe60 528 Gene3D G3DSA:3.10.105.10 287 498 6.6E-48 T 28-03-2018 DDI_RS10440 14289560d795fe65ae3227586acffe60 528 Gene3D G3DSA:3.40.190.10 186 286 4.7E-27 T 28-03-2018 DDI_RS10440 14289560d795fe65ae3227586acffe60 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 432 9.9E-91 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS10440 14289560d795fe65ae3227586acffe60 528 PIRSF PIRSF002741 1 528 9.3E-143 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS10440 14289560d795fe65ae3227586acffe60 528 SUPERFAMILY SSF53850 28 526 5.43E-136 T 28-03-2018 DDI_RS10440 14289560d795fe65ae3227586acffe60 528 Gene3D G3DSA:3.90.76.10 45 185 8.4E-38 T 28-03-2018 DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 PRINTS PR01032 Gene IV protein signature 245 268 4.3E-10 T 28-03-2018 DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 PRINTS PR01032 Gene IV protein signature 353 381 4.3E-10 T 28-03-2018 DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 PRINTS PR01032 Gene IV protein signature 286 309 4.3E-10 T 28-03-2018 DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 PRINTS PR01032 Gene IV protein signature 406 428 4.3E-10 T 28-03-2018 DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 Pfam PF03958 Bacterial type II/III secretion system short domain 133 195 5.1E-12 T 28-03-2018 IPR005644 NolW-like DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 SMART SM00965 57 105 2.4E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 32 425 1.9E-126 T 28-03-2018 IPR013355 Type IV pilus secretin PilQ DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 Pfam PF07660 Secretin and TonB N terminus short domain 58 104 2.6E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DDI_RS18385 4d80d16ff3e208d173be0afe45c06711 434 Pfam PF00263 Bacterial type II and III secretion system protein 265 425 1.7E-45 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 DDI_RS16825 bdc60078cb14d7995532f544d8a00994 299 SUPERFAMILY SSF63380 7 132 6.09E-12 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS16825 bdc60078cb14d7995532f544d8a00994 299 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 130 1.0E-33 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting DDI_RS16825 bdc60078cb14d7995532f544d8a00994 299 Gene3D G3DSA:2.40.30.10 3 130 3.8E-27 T 28-03-2018 DDI_RS16825 bdc60078cb14d7995532f544d8a00994 299 Pfam PF04954 Siderophore-interacting protein 147 295 3.5E-34 T 28-03-2018 IPR007037 Siderophore-interacting protein DDI_RS16825 bdc60078cb14d7995532f544d8a00994 299 Gene3D G3DSA:3.40.50.80 140 299 2.6E-36 T 28-03-2018 DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 Pfam PF07719 Tetratricopeptide repeat 199 227 7.4E-6 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 SUPERFAMILY SSF48452 184 335 1.71E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 Gene3D G3DSA:3.90.550.10 1 239 1.7E-23 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 SUPERFAMILY SSF53448 1 134 7.5E-23 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 Pfam PF00535 Glycosyl transferase family 2 3 114 1.0E-17 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 SMART SM00028 198 231 2.7E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 SMART SM00028 269 302 18.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 SMART SM00028 309 342 78.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS07090 68e9640db3386aa7cec4c365016a219d 350 Gene3D G3DSA:1.25.40.10 242 348 1.7E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS15815 90ee5530f19d798c29ad1fa2c3897806 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.278 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 DDI_RS15815 90ee5530f19d798c29ad1fa2c3897806 197 Pfam PF01725 Ham1 family 4 192 7.5E-58 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 DDI_RS15815 90ee5530f19d798c29ad1fa2c3897806 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 2.3E-66 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 DDI_RS15815 90ee5530f19d798c29ad1fa2c3897806 197 SUPERFAMILY SSF52972 1 195 1.83E-74 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDI_RS15815 90ee5530f19d798c29ad1fa2c3897806 197 Gene3D G3DSA:3.90.950.10 1 197 1.3E-80 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 9.4E-39 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 PIRSF PIRSF000077 2 108 2.2E-44 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 SUPERFAMILY SSF52833 2 108 4.93E-41 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 Gene3D G3DSA:3.40.30.10 1 108 3.5E-36 T 28-03-2018 DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 PRINTS PR00421 Thioredoxin family signature 24 32 8.6E-10 T 28-03-2018 DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 PRINTS PR00421 Thioredoxin family signature 72 83 8.6E-10 T 28-03-2018 DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 PRINTS PR00421 Thioredoxin family signature 32 41 8.6E-10 T 28-03-2018 DDI_RS18860 d0f844c77fe4237509f9986c0d72b183 108 Pfam PF00085 Thioredoxin 5 106 1.7E-33 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 DDI_RS20555 42da55a6cfc96e5564b779dbabdd5f4d 256 SUPERFAMILY SSF53474 22 250 9.95E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS20555 42da55a6cfc96e5564b779dbabdd5f4d 256 Gene3D G3DSA:3.40.50.1820 17 256 1.1E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS20555 42da55a6cfc96e5564b779dbabdd5f4d 256 Pfam PF12697 Alpha/beta hydrolase family 25 248 3.0E-13 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS07680 51903337c4d0dcac2dba6cb2d8691200 393 Pfam PF07690 Major Facilitator Superfamily 16 358 2.2E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS07680 51903337c4d0dcac2dba6cb2d8691200 393 Gene3D G3DSA:1.20.1250.20 199 393 7.8E-12 T 28-03-2018 DDI_RS07680 51903337c4d0dcac2dba6cb2d8691200 393 SUPERFAMILY SSF103473 3 389 3.92E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS07680 51903337c4d0dcac2dba6cb2d8691200 393 Gene3D G3DSA:1.20.1250.20 5 198 5.9E-36 T 28-03-2018 DDI_RS07680 51903337c4d0dcac2dba6cb2d8691200 393 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 382 4.2E-133 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 DDI_RS01870 c33f28725bb8b6b037b07baf077132ab 588 Pfam PF03237 Terminase-like family 162 382 9.7E-60 T 28-03-2018 DDI_RS01870 c33f28725bb8b6b037b07baf077132ab 588 Gene3D G3DSA:1.10.10.10 3 93 3.0E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01870 c33f28725bb8b6b037b07baf077132ab 588 Pfam PF17289 Terminase RNaseH-like domain 410 571 1.1E-43 T 28-03-2018 IPR035421 Terminase, large subunit gp17-like DDI_RS01870 c33f28725bb8b6b037b07baf077132ab 588 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 7.2E-23 T 28-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 SUPERFAMILY SSF82689 1004 1104 1.96E-25 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 SUPERFAMILY SSF50182 937 1002 3.27E-16 T 28-03-2018 IPR010920 LSM domain DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 Gene3D G3DSA:1.20.5.50 39 201 4.9E-5 T 28-03-2018 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 Gene3D G3DSA:2.30.30.60 953 1003 1.7E-12 T 28-03-2018 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 SUPERFAMILY SSF82861 852 935 2.48E-7 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 Pfam PF00924 Mechanosensitive ion channel 894 1093 1.5E-57 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 966 1000 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 515 833 1.2E-93 T 28-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 Gene3D G3DSA:3.30.70.100 1004 1098 8.0E-19 T 28-03-2018 DDI_RS04400 095de8e6d0d13b37519ecb6132b06e34 1126 Pfam PF12795 Mechanosensitive ion channel porin domain 60 295 8.0E-63 T 28-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.4E-38 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 SMART SM00861 319 484 2.0E-64 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 Gene3D G3DSA:3.40.50.970 3 297 1.0E-76 T 28-03-2018 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 SUPERFAMILY SSF52922 492 619 5.23E-32 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.0E-25 T 28-03-2018 IPR033248 Transketolase, C-terminal domain DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 Gene3D G3DSA:3.40.50.920 495 620 6.7E-35 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 7.2E-118 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 Gene3D G3DSA:3.40.50.970 298 487 4.4E-63 T 28-03-2018 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 SUPERFAMILY SSF52518 243 381 5.48E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 SUPERFAMILY SSF52518 9 199 5.48E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.968 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 620 0.0 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS04185 291ad7e4360d78234c6f2825989abaa0 620 SUPERFAMILY SSF52518 317 504 1.33E-55 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS17680 d22f32f2cd41b357717877682435a549 306 SUPERFAMILY SSF103481 200 295 1.44E-10 T 28-03-2018 DDI_RS17680 d22f32f2cd41b357717877682435a549 306 Pfam PF00892 EamA-like transporter family 158 295 4.6E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS17680 d22f32f2cd41b357717877682435a549 306 Pfam PF00892 EamA-like transporter family 19 147 1.1E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS17680 d22f32f2cd41b357717877682435a549 306 SUPERFAMILY SSF103481 51 149 2.75E-6 T 28-03-2018 DDI_RS07395 c7837b1630fa76880195435a8a002b9c 393 Gene3D G3DSA:1.20.1250.20 2 197 3.1E-20 T 28-03-2018 DDI_RS07395 c7837b1630fa76880195435a8a002b9c 393 SUPERFAMILY SSF103473 11 387 1.83E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS07395 c7837b1630fa76880195435a8a002b9c 393 Pfam PF07690 Major Facilitator Superfamily 31 249 2.1E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS07395 c7837b1630fa76880195435a8a002b9c 393 Gene3D G3DSA:1.20.1250.20 198 388 2.9E-24 T 28-03-2018 DDI_RS19430 7c7f67a46b9650bea6fba70711dc51fe 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 259 272 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS19430 7c7f67a46b9650bea6fba70711dc51fe 310 SUPERFAMILY SSF53613 1 304 1.56E-73 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS19430 7c7f67a46b9650bea6fba70711dc51fe 310 Pfam PF00294 pfkB family carbohydrate kinase 4 307 1.6E-72 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB DDI_RS19430 7c7f67a46b9650bea6fba70711dc51fe 310 Gene3D G3DSA:3.40.1190.20 1 309 1.5E-55 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 38 428 1.9E-159 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 Gene3D G3DSA:3.40.50.1980 228 373 5.1E-70 T 28-03-2018 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 Gene3D G3DSA:3.40.50.1980 31 227 8.2E-84 T 28-03-2018 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PIRSF PIRSF000099 2 432 7.7E-167 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 9 429 40.738 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PRINTS PR00083 Histidinol dehydrogenase signature 232 253 5.5E-100 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 5.5E-100 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 5.5E-100 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PRINTS PR00083 Histidinol dehydrogenase signature 170 196 5.5E-100 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PRINTS PR00083 Histidinol dehydrogenase signature 200 225 5.5E-100 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PRINTS PR00083 Histidinol dehydrogenase signature 254 273 5.5E-100 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PRINTS PR00083 Histidinol dehydrogenase signature 38 62 5.5E-100 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 PRINTS PR00083 Histidinol dehydrogenase signature 111 138 5.5E-100 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 SUPERFAMILY SSF53720 9 431 6.28E-90 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 Pfam PF00815 Histidinol dehydrogenase 30 429 1.6E-163 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS08240 e4187dde13bd8b4c4a2657c176c0f6fe 436 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 232 264 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 DDI_RS06910 65b20cf2b2e72a27e057b4190a2f76f0 296 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 6 276 6.8E-72 T 28-03-2018 IPR014148 P-type conjugative transfer protein VirB9 DDI_RS06910 65b20cf2b2e72a27e057b4190a2f76f0 296 Pfam PF03524 Conjugal transfer protein 30 274 5.8E-55 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX DDI_RS04045 dd7f2d3edd528f5bfe1c8d7b0bf7fe47 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 25.102 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase DDI_RS04045 dd7f2d3edd528f5bfe1c8d7b0bf7fe47 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 9.4E-34 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase DDI_RS04045 dd7f2d3edd528f5bfe1c8d7b0bf7fe47 94 SUPERFAMILY SSF51182 1 94 1.38E-31 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS04045 dd7f2d3edd528f5bfe1c8d7b0bf7fe47 94 Gene3D G3DSA:2.60.120.10 3 93 3.5E-34 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS19965 a37368e08aff04addd76c004b5177017 147 PRINTS PR00369 Flavodoxin signature 106 125 1.8E-10 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS19965 a37368e08aff04addd76c004b5177017 147 PRINTS PR00369 Flavodoxin signature 82 92 1.8E-10 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS19965 a37368e08aff04addd76c004b5177017 147 PRINTS PR00369 Flavodoxin signature 5 18 1.8E-10 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS19965 a37368e08aff04addd76c004b5177017 147 PRINTS PR00369 Flavodoxin signature 51 62 1.8E-10 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS19965 a37368e08aff04addd76c004b5177017 147 Gene3D G3DSA:3.40.50.360 1 147 2.8E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS19965 a37368e08aff04addd76c004b5177017 147 SUPERFAMILY SSF52218 1 146 2.51E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS19965 a37368e08aff04addd76c004b5177017 147 Pfam PF00258 Flavodoxin 7 138 8.9E-27 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 SUPERFAMILY SSF49313 1284 1383 7.46E-27 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 SMART SM00736 1488 1588 2.8E-39 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 SMART SM00736 1286 1386 3.0E-44 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 SMART SM00736 1387 1487 5.5E-47 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 SUPERFAMILY SSF49313 1385 1485 7.46E-27 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 SUPERFAMILY SSF49313 1486 1583 1.47E-25 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Gene3D G3DSA:2.60.120.640 1021 1135 9.3E-13 T 28-03-2018 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Pfam PF05345 Putative Ig domain 1321 1367 3.6E-9 T 28-03-2018 IPR008009 Putative Ig DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Pfam PF05345 Putative Ig domain 1422 1468 5.2E-9 T 28-03-2018 IPR008009 Putative Ig DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Pfam PF05345 Putative Ig domain 1523 1569 2.7E-8 T 28-03-2018 IPR008009 Putative Ig DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Pfam PF14252 Domain of unknown function (DUF4347) 131 285 1.6E-50 T 28-03-2018 IPR025592 Domain of unknown function DUF4347 DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Gene3D G3DSA:2.60.40.10 852 1006 0.0022 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Gene3D G3DSA:2.60.40.10 1136 1252 0.27 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Gene3D G3DSA:2.60.40.10 1273 1381 3.3E-14 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Gene3D G3DSA:2.60.40.10 1482 1583 8.9E-15 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS17640 cbdfa00dd4a9ef3c1f1ead5955e52e4f 1802 Gene3D G3DSA:2.60.40.10 1384 1481 3.9E-15 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 Gene3D G3DSA:3.30.300.130 102 187 5.2E-25 T 28-03-2018 IPR034904 Fe-S cluster assembly domain DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 SUPERFAMILY SSF89360 1 97 1.67E-21 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 3.2E-13 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 SUPERFAMILY SSF117916 95 184 3.49E-24 T 28-03-2018 IPR034904 Fe-S cluster assembly domain DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 Gene3D G3DSA:2.60.300.12 1 101 1.7E-17 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 Pfam PF01106 NifU-like domain 111 177 4.1E-20 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.672 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-25 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DDI_RS18490 b1d47acc2868ba571c5a549e4205af7d 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.8E-101 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 DDI_RS07240 205b37f98da4be8e0f052b1a70509125 334 SUPERFAMILY SSF111369 179 291 9.02E-11 T 28-03-2018 DDI_RS07240 205b37f98da4be8e0f052b1a70509125 334 Gene3D G3DSA:1.20.1600.10 179 327 4.6E-15 T 28-03-2018 DDI_RS07240 205b37f98da4be8e0f052b1a70509125 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 287 2.9E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS07240 205b37f98da4be8e0f052b1a70509125 334 SUPERFAMILY SSF111369 42 108 1.44E-8 T 28-03-2018 DDI_RS07240 205b37f98da4be8e0f052b1a70509125 334 Gene3D G3DSA:1.10.287.470 111 170 6.2E-6 T 28-03-2018 DDI_RS07240 205b37f98da4be8e0f052b1a70509125 334 Gene3D G3DSA:2.40.50.100 43 107 1.1E-16 T 28-03-2018 DDI_RS05985 900f4582de876e2e122afbc3257c3fbe 472 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 9 449 1.4E-268 T 28-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 DDI_RS05985 900f4582de876e2e122afbc3257c3fbe 472 SUPERFAMILY SSF53383 66 451 1.32E-121 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS05985 900f4582de876e2e122afbc3257c3fbe 472 PIRSF PIRSF000521 52 452 9.4E-46 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS05985 900f4582de876e2e122afbc3257c3fbe 472 Gene3D G3DSA:3.40.640.10 90 339 3.7E-84 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS05985 900f4582de876e2e122afbc3257c3fbe 472 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 268 305 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS05985 900f4582de876e2e122afbc3257c3fbe 472 Pfam PF00202 Aminotransferase class-III 74 449 7.4E-107 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS05985 900f4582de876e2e122afbc3257c3fbe 472 Gene3D G3DSA:3.90.1150.10 340 460 4.0E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS06605 d4506287c1e93c18e5eb612a150378ea 337 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 323 1.1E-104 T 28-03-2018 IPR010732 Type VI secretion, TssG-like DDI_RS06605 d4506287c1e93c18e5eb612a150378ea 337 Pfam PF06996 Type VI secretion, TssG 23 323 4.5E-94 T 28-03-2018 IPR010732 Type VI secretion, TssG-like DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 SUPERFAMILY SSF52540 12 400 9.43E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 Gene3D G3DSA:3.40.50.300 134 395 9.0E-52 T 28-03-2018 DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 13 680 2.3E-174 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 SUPERFAMILY SSF52540 387 418 3.01E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 SUPERFAMILY SSF52540 320 359 3.01E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 SUPERFAMILY SSF52540 501 661 3.01E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 22 681 48.843 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 Gene3D G3DSA:3.40.50.300 537 663 2.5E-17 T 28-03-2018 DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 Gene3D G3DSA:3.40.50.300 405 536 5.5E-11 T 28-03-2018 DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 Pfam PF13604 AAA domain 184 357 1.1E-28 T 28-03-2018 DDI_RS09685 cde2dc0db72320107ec24238205fa668 681 Pfam PF13538 UvrD-like helicase C-terminal domain 609 652 9.6E-14 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain DDI_RS13250 91847957d78411ed97ef8e1e2e458d1e 399 Pfam PF07745 Glycosyl hydrolase family 53 39 398 1.9E-116 T 28-03-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 DDI_RS13250 91847957d78411ed97ef8e1e2e458d1e 399 SUPERFAMILY SSF51445 36 399 2.94E-96 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS13250 91847957d78411ed97ef8e1e2e458d1e 399 Gene3D G3DSA:3.20.20.80 36 399 4.6E-72 T 28-03-2018 DDI_RS01825 5a24681338e6ba5a58bb566566ab31ed 74 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DDI_RS01825 5a24681338e6ba5a58bb566566ab31ed 74 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 2 64 1.2E-19 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type DDI_RS01825 5a24681338e6ba5a58bb566566ab31ed 74 SUPERFAMILY SSF57716 34 71 9.27E-9 T 28-03-2018 DDI_RS01825 5a24681338e6ba5a58bb566566ab31ed 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 64 7.2E-12 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 Pfam PF00365 Phosphofructokinase 4 276 2.3E-105 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 SUPERFAMILY SSF53784 3 310 3.4E-110 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 Gene3D G3DSA:3.40.50.450 212 307 2.9E-7 T 28-03-2018 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 6.0E-124 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 Gene3D G3DSA:3.40.50.450 1 211 4.9E-82 T 28-03-2018 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 45.866 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 PIRSF PIRSF000532 1 320 1.7E-129 T 28-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DDI_RS19170 0abe1e9ffce075ab799acf5a84af40ce 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 28-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDI_RS05980 2d9de4ba623c9b63ebe8e96a0b01b66d 478 Gene3D G3DSA:3.40.605.10 1 263 5.5E-97 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS05980 2d9de4ba623c9b63ebe8e96a0b01b66d 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 DDI_RS05980 2d9de4ba623c9b63ebe8e96a0b01b66d 478 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 8 477 3.9E-286 T 28-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 DDI_RS05980 2d9de4ba623c9b63ebe8e96a0b01b66d 478 SUPERFAMILY SSF53720 6 477 1.11E-159 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS05980 2d9de4ba623c9b63ebe8e96a0b01b66d 478 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 5 478 71.393 T 28-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 DDI_RS05980 2d9de4ba623c9b63ebe8e96a0b01b66d 478 Pfam PF00171 Aldehyde dehydrogenase family 21 474 2.7E-166 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS05980 2d9de4ba623c9b63ebe8e96a0b01b66d 478 Gene3D G3DSA:3.40.309.10 264 460 8.3E-68 T 28-03-2018 DDI_RS19650 94e6d4817145123182bafe28fc1023d8 305 SUPERFAMILY SSF160964 12 77 2.75E-6 T 28-03-2018 DDI_RS19650 94e6d4817145123182bafe28fc1023d8 305 Gene3D G3DSA:1.10.3720.10 63 294 7.3E-34 T 28-03-2018 DDI_RS19650 94e6d4817145123182bafe28fc1023d8 305 Gene3D G3DSA:1.20.58.370 3 45 1.6E-4 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain DDI_RS19650 94e6d4817145123182bafe28fc1023d8 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 286 1.8E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19650 94e6d4817145123182bafe28fc1023d8 305 SUPERFAMILY SSF161098 62 285 1.11E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00945 ef5f507743185eee2d3fdb7ed9737afe 208 Pfam PF01810 LysE type translocator 16 201 2.1E-40 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS02590 b615a3a34e28ede4b50fe23d7fda587d 552 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 65 471 5.7E-65 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS02590 b615a3a34e28ede4b50fe23d7fda587d 552 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 180 205 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 DDI_RS02590 b615a3a34e28ede4b50fe23d7fda587d 552 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 5 552 0.0 T 28-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 DDI_RS02590 b615a3a34e28ede4b50fe23d7fda587d 552 Pfam PF00474 Sodium:solute symporter family 65 471 1.3E-131 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS02590 b615a3a34e28ede4b50fe23d7fda587d 552 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 3 552 51.616 T 28-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 DDI_RS02590 b615a3a34e28ede4b50fe23d7fda587d 552 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 453 473 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 Gene3D G3DSA:3.30.1330.30 1 75 1.1E-17 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 Gene3D G3DSA:3.40.1280.10 76 244 6.1E-49 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 1.3E-89 T 28-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 SMART SM00967 4 80 3.7E-21 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 5.6E-20 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.046 T 28-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 Pfam PF00588 SpoU rRNA Methylase family 96 236 3.7E-40 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 SUPERFAMILY SSF75217 69 243 3.07E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS15760 782fe2a4457d31ab6e755031568c35cb 244 SUPERFAMILY SSF55315 2 75 6.83E-20 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 502 2.6E-136 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 SUPERFAMILY SSF81442 43 558 7.19E-177 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 8.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 28-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 Gene3D G3DSA:1.10.287.70 573 640 4.0E-18 T 28-03-2018 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS04250 70c72b0060e2df1ba267f35c8a41105b 663 Gene3D G3DSA:1.20.210.10 43 561 2.0E-183 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS11150 f1b5d86609d703046003f5911a4e795c 280 SUPERFAMILY SSF48317 145 233 1.57E-26 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS11150 f1b5d86609d703046003f5911a4e795c 280 SUPERFAMILY SSF48317 14 113 1.57E-26 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS11150 f1b5d86609d703046003f5911a4e795c 280 Gene3D G3DSA:1.20.144.10 19 250 3.9E-22 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS11150 f1b5d86609d703046003f5911a4e795c 280 Pfam PF01569 PAP2 superfamily 80 232 1.7E-27 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS11150 f1b5d86609d703046003f5911a4e795c 280 SMART SM00014 77 227 9.8E-27 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS04705 2914b6e69a6f637bd04bd08e4f00d146 235 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 7 235 59.064 T 28-03-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae DDI_RS04705 2914b6e69a6f637bd04bd08e4f00d146 235 Gene3D G3DSA:1.10.8.60 169 235 1.7E-12 T 28-03-2018 DDI_RS04705 2914b6e69a6f637bd04bd08e4f00d146 235 SUPERFAMILY SSF52540 19 213 4.51E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04705 2914b6e69a6f637bd04bd08e4f00d146 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 133 160 9.6E-7 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDI_RS04705 2914b6e69a6f637bd04bd08e4f00d146 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 45 65 9.6E-7 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDI_RS04705 2914b6e69a6f637bd04bd08e4f00d146 235 Pfam PF00308 Bacterial dnaA protein 18 214 1.7E-16 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA DDI_RS04705 2914b6e69a6f637bd04bd08e4f00d146 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 8 233 2.0E-84 T 28-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 DDI_RS04705 2914b6e69a6f637bd04bd08e4f00d146 235 Gene3D G3DSA:3.40.50.300 15 166 2.3E-8 T 28-03-2018 DDI_RS13710 9037b7635827412c1c3d406f3a8c4e2d 252 SMART SM00062 29 247 3.8E-28 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS13710 9037b7635827412c1c3d406f3a8c4e2d 252 SUPERFAMILY SSF53850 4 251 7.25E-49 T 28-03-2018 DDI_RS13710 9037b7635827412c1c3d406f3a8c4e2d 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 251 2.7E-39 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS13710 9037b7635827412c1c3d406f3a8c4e2d 252 Gene3D G3DSA:3.40.190.10 153 252 1.8E-9 T 28-03-2018 DDI_RS13710 9037b7635827412c1c3d406f3a8c4e2d 252 SMART SM00079 29 252 0.0062 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DDI_RS13710 9037b7635827412c1c3d406f3a8c4e2d 252 Gene3D G3DSA:3.40.190.10 25 152 2.3E-30 T 28-03-2018 DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 SMART SM00490 281 360 1.3E-8 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 SUPERFAMILY SSF52540 50 169 2.24E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 SUPERFAMILY SSF52540 252 375 2.24E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 Gene3D G3DSA:3.40.50.300 1 164 2.5E-28 T 28-03-2018 DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 Gene3D G3DSA:3.40.50.300 238 374 4.5E-19 T 28-03-2018 DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 Gene3D G3DSA:2.20.28.20 448 479 0.0017 T 28-03-2018 DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 Pfam PF00271 Helicase conserved C-terminal domain 262 358 2.6E-12 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 SUPERFAMILY SSF57829 438 481 3.3E-6 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 SMART SM00487 1 192 3.5E-16 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS07665 7035bff1578e7e59ee83a3bb70b27c5d 601 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 6.2E-24 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DDI_RS15395 33f9f7737052aaaf9071b9cee2956f61 408 SUPERFAMILY SSF51261 270 405 3.4E-48 T 28-03-2018 IPR011055 Duplicated hybrid motif DDI_RS15395 33f9f7737052aaaf9071b9cee2956f61 408 SUPERFAMILY SSF54106 110 154 6.8E-8 T 28-03-2018 IPR018392 LysM domain DDI_RS15395 33f9f7737052aaaf9071b9cee2956f61 408 Pfam PF01476 LysM domain 112 153 1.9E-9 T 28-03-2018 IPR018392 LysM domain DDI_RS15395 33f9f7737052aaaf9071b9cee2956f61 408 Pfam PF01551 Peptidase family M23 308 401 6.3E-31 T 28-03-2018 IPR016047 Peptidase M23 DDI_RS15395 33f9f7737052aaaf9071b9cee2956f61 408 SMART SM00257 111 155 9.1E-8 T 28-03-2018 IPR018392 LysM domain DDI_RS15395 33f9f7737052aaaf9071b9cee2956f61 408 Gene3D G3DSA:3.10.350.10 105 190 8.5E-10 T 28-03-2018 DDI_RS15395 33f9f7737052aaaf9071b9cee2956f61 408 Gene3D G3DSA:2.70.70.10 218 408 2.6E-39 T 28-03-2018 DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 Gene3D G3DSA:3.40.50.300 350 579 2.4E-10 T 28-03-2018 DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 Pfam PF08273 Zinc-binding domain of primase-helicase 31 67 1.6E-18 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 Pfam PF13481 AAA domain 346 517 2.7E-43 T 28-03-2018 DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 Pfam PF13362 Toprim domain 204 301 3.6E-11 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 SUPERFAMILY SSF52540 352 557 2.44E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 Gene3D G3DSA:3.40.1360.10 182 313 1.1E-12 T 28-03-2018 DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 SMART SM00493 202 282 1.8E-4 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 Gene3D G3DSA:3.90.580.10 12 96 1.9E-13 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 SUPERFAMILY SSF57783 11 89 1.7E-10 T 28-03-2018 DDI_RS00830 b8c277058847c4a758429d6ebd8575ef 681 SMART SM00778 31 67 8.8E-20 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 DDI_RS01615 e6097cc50e7f76de7196acd9bd5608e5 101 Pfam PF13997 YqjK-like protein 14 86 5.0E-24 T 28-03-2018 IPR025612 YqjK-like protein DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 SUPERFAMILY SSF46785 3 87 3.55E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 Gene3D G3DSA:3.40.190.10 178 263 8.0E-22 T 28-03-2018 DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 SUPERFAMILY SSF53850 93 296 6.15E-40 T 28-03-2018 DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 Pfam PF03466 LysR substrate binding domain 91 292 6.8E-39 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 Gene3D G3DSA:3.40.190.10 92 177 3.2E-16 T 28-03-2018 DDI_RS03660 5fef54f49cad823991aa2ca8992be264 308 Gene3D G3DSA:1.10.10.10 4 91 1.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20765 59c8fa6fadf53746ad8b005df0824b3c 256 Gene3D G3DSA:3.90.470.20 129 227 1.0E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS20765 59c8fa6fadf53746ad8b005df0824b3c 256 SUPERFAMILY SSF56214 118 216 2.09E-21 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS20765 59c8fa6fadf53746ad8b005df0824b3c 256 SUPERFAMILY SSF56214 59 110 9.42E-11 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS20765 59c8fa6fadf53746ad8b005df0824b3c 256 Gene3D G3DSA:3.90.470.20 42 128 3.4E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS20765 59c8fa6fadf53746ad8b005df0824b3c 256 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 118 219 1.2E-16 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 SMART SM01228 546 617 6.1E-45 T 28-03-2018 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 5.1E-296 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.6 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 SUPERFAMILY SSF51905 97 261 2.89E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 SUPERFAMILY SSF51905 7 66 2.89E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 Pfam PF13932 GidA associated domain 403 616 7.8E-77 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 Pfam PF01134 Glucose inhibited division protein A 8 395 2.2E-168 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DDI_RS19970 bc7275ddf07862f483896fda383945ec 629 Gene3D G3DSA:3.50.50.60 5 264 1.1E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01065 0341728c72dcc335d4b43993809e2da1 472 Gene3D G3DSA:3.40.630.10 11 208 5.0E-21 T 28-03-2018 DDI_RS01065 0341728c72dcc335d4b43993809e2da1 472 Gene3D G3DSA:3.30.70.360 209 365 3.1E-28 T 28-03-2018 DDI_RS01065 0341728c72dcc335d4b43993809e2da1 472 Pfam PF01546 Peptidase family M20/M25/M40 89 451 2.0E-19 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS01065 0341728c72dcc335d4b43993809e2da1 472 SUPERFAMILY SSF53187 370 457 2.96E-46 T 28-03-2018 DDI_RS01065 0341728c72dcc335d4b43993809e2da1 472 SUPERFAMILY SSF53187 15 205 2.96E-46 T 28-03-2018 DDI_RS04325 ab60b4e4c520e6afbd7a1306360cd584 588 SMART SM00382 361 547 1.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS04325 ab60b4e4c520e6afbd7a1306360cd584 588 Gene3D G3DSA:1.20.1560.10 1 323 7.3E-61 T 28-03-2018 DDI_RS04325 ab60b4e4c520e6afbd7a1306360cd584 588 Pfam PF00005 ABC transporter 352 500 3.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS04325 ab60b4e4c520e6afbd7a1306360cd584 588 Gene3D G3DSA:3.40.50.300 324 577 1.7E-64 T 28-03-2018 DDI_RS04325 ab60b4e4c520e6afbd7a1306360cd584 588 SUPERFAMILY SSF52540 328 572 2.66E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04325 ab60b4e4c520e6afbd7a1306360cd584 588 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS04325 ab60b4e4c520e6afbd7a1306360cd584 588 SUPERFAMILY SSF90123 7 327 4.84E-73 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS04325 ab60b4e4c520e6afbd7a1306360cd584 588 Pfam PF00664 ABC transporter transmembrane region 21 291 1.3E-40 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 Gene3D G3DSA:1.20.1250.20 255 466 5.6E-20 T 28-03-2018 DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 SUPERFAMILY SSF103473 244 454 7.59E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 SUPERFAMILY SSF103473 8 194 7.59E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 Gene3D G3DSA:1.20.1250.20 7 195 4.6E-31 T 28-03-2018 DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 41.604 T 28-03-2018 IPR023721 Multidrug resistance protein MdtD, putative DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.9E-6 T 28-03-2018 DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.9E-6 T 28-03-2018 DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 2.9E-6 T 28-03-2018 DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.9E-6 T 28-03-2018 DDI_RS13645 53b73f7ea0cb7fac73da1d0abbd19671 467 Pfam PF07690 Major Facilitator Superfamily 15 405 7.8E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS10065 38e720c4bf0aff3f63b11b438f52c5a5 370 Gene3D G3DSA:2.40.30.10 284 370 9.3E-29 T 28-03-2018 DDI_RS10065 38e720c4bf0aff3f63b11b438f52c5a5 370 Gene3D G3DSA:3.40.50.620 1 213 1.3E-66 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS10065 38e720c4bf0aff3f63b11b438f52c5a5 370 SUPERFAMILY SSF52402 5 297 6.17E-59 T 28-03-2018 DDI_RS10065 38e720c4bf0aff3f63b11b438f52c5a5 370 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 363 40.815 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 DDI_RS10065 38e720c4bf0aff3f63b11b438f52c5a5 370 Pfam PF03054 tRNA methyl transferase 7 362 8.7E-144 T 28-03-2018 DDI_RS10065 38e720c4bf0aff3f63b11b438f52c5a5 370 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 362 3.2E-155 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 DDI_RS10065 38e720c4bf0aff3f63b11b438f52c5a5 370 Gene3D G3DSA:2.30.30.280 214 282 1.3E-28 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 DDI_RS12345 2d38bfaab26f3792cd21ad1b7593677d 418 SMART SM00825 Beta-ketoacyl synthase 5 418 2.4E-11 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS12345 2d38bfaab26f3792cd21ad1b7593677d 418 SUPERFAMILY SSF53901 3 258 3.26E-35 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12345 2d38bfaab26f3792cd21ad1b7593677d 418 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 254 7.8E-24 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12345 2d38bfaab26f3792cd21ad1b7593677d 418 SUPERFAMILY SSF53901 222 416 5.12E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12345 2d38bfaab26f3792cd21ad1b7593677d 418 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 276 374 9.5E-27 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12345 2d38bfaab26f3792cd21ad1b7593677d 418 Gene3D G3DSA:3.40.47.10 273 418 1.7E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12345 2d38bfaab26f3792cd21ad1b7593677d 418 Gene3D G3DSA:3.40.47.10 1 266 4.0E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS15750 f2798d63edf061548a5dbe7c7cbebe66 122 SUPERFAMILY SSF159871 17 114 6.41E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS15750 f2798d63edf061548a5dbe7c7cbebe66 122 Pfam PF07338 Protein of unknown function (DUF1471) 57 114 3.2E-15 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS15750 f2798d63edf061548a5dbe7c7cbebe66 122 Gene3D G3DSA:3.30.1660.10 52 113 2.0E-16 T 28-03-2018 IPR025543 Dodecin-like DDI_RS07905 535c13dafed2a9fedd2353ea3e275aeb 281 Gene3D G3DSA:3.40.190.10 121 220 4.1E-36 T 28-03-2018 DDI_RS07905 535c13dafed2a9fedd2353ea3e275aeb 281 Pfam PF03180 NLPA lipoprotein 32 259 5.9E-74 T 28-03-2018 IPR004872 Lipoprotein NlpA family DDI_RS07905 535c13dafed2a9fedd2353ea3e275aeb 281 SUPERFAMILY SSF53850 31 259 7.84E-64 T 28-03-2018 DDI_RS07905 535c13dafed2a9fedd2353ea3e275aeb 281 Gene3D G3DSA:3.40.190.10 30 120 4.6E-19 T 28-03-2018 DDI_RS10290 90e9c072dcc299d28d50d6bba6c1df54 200 Pfam PF06188 HrpE/YscL/FliH and V-type ATPase subunit E 1 191 5.8E-85 T 28-03-2018 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E DDI_RS10290 90e9c072dcc299d28d50d6bba6c1df54 200 Gene3D G3DSA:1.20.5.620 33 94 4.4E-5 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain DDI_RS10290 90e9c072dcc299d28d50d6bba6c1df54 200 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 182 1.5E-48 T 28-03-2018 IPR012842 Type III secretion system HrpE/YscL DDI_RS15150 fc6ac3dcac6468b99f2afb1ebbbbfb86 204 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 122.504 T 28-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 DDI_RS15150 fc6ac3dcac6468b99f2afb1ebbbbfb86 204 SUPERFAMILY SSF53639 6 200 7.46E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS15150 fc6ac3dcac6468b99f2afb1ebbbbfb86 204 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 195 9.1E-45 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS15150 fc6ac3dcac6468b99f2afb1ebbbbfb86 204 SMART SM01007 8 196 4.8E-54 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS15150 fc6ac3dcac6468b99f2afb1ebbbbfb86 204 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 10 199 5.2E-73 T 28-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 DDI_RS15150 fc6ac3dcac6468b99f2afb1ebbbbfb86 204 Gene3D G3DSA:3.40.225.10 2 203 7.4E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 Gene3D G3DSA:3.50.30.20 2 151 2.9E-63 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 SUPERFAMILY SSF52317 153 377 1.99E-63 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 SUPERFAMILY SSF52021 3 143 5.62E-57 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.3E-52 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 3.0E-150 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.642 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.6E-49 T 28-03-2018 IPR017926 Glutamine amidotransferase DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 8.9E-41 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 8.9E-41 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 8.9E-41 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 8.9E-41 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 8.9E-41 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 Gene3D G3DSA:3.40.50.880 152 379 1.7E-67 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 SMART SM01097 3 133 6.9E-92 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 28-03-2018 DDI_RS16985 1050878544bc1a6ae47f2e89bbd043af 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 28-03-2018 DDI_RS17865 3e34eab841e02ffd76dea04ebf3338f4 309 Gene3D G3DSA:3.40.50.880 34 301 2.1E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS17865 3e34eab841e02ffd76dea04ebf3338f4 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.8E-157 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 DDI_RS17865 3e34eab841e02ffd76dea04ebf3338f4 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.167 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 DDI_RS17865 3e34eab841e02ffd76dea04ebf3338f4 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.4E-132 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 DDI_RS17865 3e34eab841e02ffd76dea04ebf3338f4 309 PIRSF PIRSF000450 1 308 5.4E-145 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 DDI_RS17865 3e34eab841e02ffd76dea04ebf3338f4 309 SUPERFAMILY SSF52317 17 297 2.87E-102 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS17865 3e34eab841e02ffd76dea04ebf3338f4 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-132 T 28-03-2018 DDI_RS08255 1ab861fd440e69eb099810335e958674 654 Gene3D G3DSA:1.10.287.950 33 413 7.7E-17 T 28-03-2018 DDI_RS08255 1ab861fd440e69eb099810335e958674 654 Gene3D G3DSA:1.10.287.950 414 610 1.4E-48 T 28-03-2018 DDI_RS08255 1ab861fd440e69eb099810335e958674 654 SMART SM00283 359 606 1.5E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS08255 1ab861fd440e69eb099810335e958674 654 SUPERFAMILY SSF58104 326 607 2.09E-72 T 28-03-2018 DDI_RS08255 1ab861fd440e69eb099810335e958674 654 SMART SM01358 35 284 2.3E-44 T 28-03-2018 IPR032255 Helical bimodular sensor domain DDI_RS08255 1ab861fd440e69eb099810335e958674 654 SMART SM00304 306 358 4.1E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS08255 1ab861fd440e69eb099810335e958674 654 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 573 4.3E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS16500 457dcd5774413cedea1b3a806eddf445 302 SMART SM00382 89 270 4.9E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS16500 457dcd5774413cedea1b3a806eddf445 302 Gene3D G3DSA:3.40.50.300 58 280 9.1E-45 T 28-03-2018 DDI_RS16500 457dcd5774413cedea1b3a806eddf445 302 SUPERFAMILY SSF52540 56 268 4.84E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16500 457dcd5774413cedea1b3a806eddf445 302 Pfam PF00005 ABC transporter 86 221 2.3E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS16500 457dcd5774413cedea1b3a806eddf445 302 ProSitePatterns PS00211 ABC transporters family signature. 194 208 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 SUPERFAMILY SSF53850 6 224 2.67E-70 T 28-03-2018 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 SUPERFAMILY SSF54913 226 298 2.22E-20 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 Gene3D G3DSA:3.40.190.10 129 223 2.0E-23 T 28-03-2018 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 Gene3D G3DSA:3.40.190.10 1 128 1.2E-35 T 28-03-2018 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 Gene3D G3DSA:3.30.70.120 227 298 9.2E-23 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.1E-22 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.397 T 28-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.6E-56 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 7.1E-48 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 28-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 DDI_RS08245 8211067eff03b022b6aa4a46c721a5de 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 203 298 2.2E-31 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DDI_RS13460 2977f153beaef47d8990930492681380 140 Pfam PF07681 DoxX 16 95 5.1E-15 T 28-03-2018 IPR032808 DoxX family DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 ProSitePatterns PS00455 Putative AMP-binding domain signature. 617 628 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1014 1029 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SMART SM00824 Thioesterase 2612 2833 6.6E-4 T 28-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.30.300.30 2400 2523 2.9E-35 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.30.300.30 874 995 9.8E-32 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 490 903 8.8E-114 T 28-03-2018 IPR010071 Amino acid adenylation domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2016 2429 2.3E-130 T 28-03-2018 IPR010071 Amino acid adenylation domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.40.50.980 1987 2146 1.0E-43 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.40.50.980 460 623 2.1E-43 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF52777 1729 1960 8.67E-43 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2141 2152 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1375 1503 1.4E-22 T 28-03-2018 IPR010060 Non-ribosomal peptide synthase DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2544 2559 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF00550 Phosphopantetheine attachment site 2522 2585 3.7E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF00550 Phosphopantetheine attachment site 992 1053 1.8E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:2.30.38.10 790 872 3.1E-25 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:1.10.1200.10 2524 2594 6.5E-19 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF52777 1249 1504 7.67E-24 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:2.30.38.10 2315 2395 1.2E-22 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF52777 7 187 2.78E-27 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.30.559.10 1053 1287 7.2E-20 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF56801 1961 2531 1.83E-151 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF00501 AMP-binding enzyme 469 879 2.4E-89 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF00501 AMP-binding enzyme 1996 2405 1.9E-99 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF00668 Condensation domain 1545 1976 7.5E-57 T 28-03-2018 IPR001242 Condensation domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF00668 Condensation domain 2 445 1.4E-59 T 28-03-2018 IPR001242 Condensation domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF00668 Condensation domain 1091 1503 2.4E-29 T 28-03-2018 IPR001242 Condensation domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF56801 425 1002 1.7E-139 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF53474 2591 2837 1.42E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF47336 2513 2585 2.09E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:1.10.1200.10 996 1052 9.4E-15 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF52777 1542 1743 4.34E-27 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF52777 1076 1260 8.45E-23 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF47336 984 1053 4.45E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SUPERFAMILY SSF52777 195 431 2.67E-34 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.40.50.980 624 788 1.6E-27 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.40.50.980 2147 2310 4.2E-41 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF00975 Thioesterase domain 2611 2822 3.1E-30 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.40.50.1820 2595 2838 8.9E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.30.559.10 1536 1737 9.1E-25 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Gene3D G3DSA:3.30.559.10 2 192 1.1E-17 T 28-03-2018 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF13193 AMP-binding enzyme C-terminal domain 887 965 4.1E-8 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 Pfam PF13193 AMP-binding enzyme C-terminal domain 2413 2496 8.6E-7 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SMART SM00823 Phosphopantetheine attachment site 990 1058 0.045 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS13055 5eee819ca71dc3d53d8a7db18e3859d6 2844 SMART SM00823 Phosphopantetheine attachment site 2517 2589 0.0021 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDI_RS05990 0eb7dbe7ec49d50ffc2592cb32ca4f47 214 Pfam PF01810 LysE type translocator 15 209 5.1E-28 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS05990 0eb7dbe7ec49d50ffc2592cb32ca4f47 214 PIRSF PIRSF006324 1 211 6.5E-42 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS05320 ea2f3f511ac2a043e1338d831d7611b8 143 Pfam PF06903 VirK protein 26 120 2.7E-39 T 28-03-2018 IPR010694 Uncharacterised protein family VirK DDI_RS17000 34b880f3b385e76277675aec4dd76061 316 Gene3D G3DSA:3.40.50.2300 1 286 1.4E-4 T 28-03-2018 DDI_RS17000 34b880f3b385e76277675aec4dd76061 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.921 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DDI_RS17000 34b880f3b385e76277675aec4dd76061 316 Pfam PF02401 LytB protein 3 282 1.5E-92 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DDI_RS17000 34b880f3b385e76277675aec4dd76061 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 1.1E-101 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DDI_RS12705 363dc37fa72b35bfc58ae5c61e8af0c5 176 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 133 151 - T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12705 363dc37fa72b35bfc58ae5c61e8af0c5 176 SUPERFAMILY SSF52833 25 175 6.6E-49 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS12705 363dc37fa72b35bfc58ae5c61e8af0c5 176 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 34 176 7.9E-50 T 28-03-2018 DDI_RS12705 363dc37fa72b35bfc58ae5c61e8af0c5 176 PIRSF PIRSF000216 3 176 2.5E-51 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12705 363dc37fa72b35bfc58ae5c61e8af0c5 176 Gene3D G3DSA:3.40.30.10 94 176 2.5E-13 T 28-03-2018 DDI_RS12705 363dc37fa72b35bfc58ae5c61e8af0c5 176 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 32 176 2.8E-52 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 Gene3D G3DSA:3.40.50.620 3 121 2.4E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 Gene3D G3DSA:1.10.10.350 366 471 1.2E-23 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 SUPERFAMILY SSF48163 299 461 9.68E-45 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 SUPERFAMILY SSF52374 3 298 1.31E-114 T 28-03-2018 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 Gene3D G3DSA:1.10.1160.10 232 314 1.2E-33 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 Gene3D G3DSA:1.10.8.70 317 361 6.4E-13 T 28-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.343 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 Gene3D G3DSA:3.40.50.620 122 231 2.5E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 2.5E-201 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DDI_RS14345 f1ba84d1b7016721d8a1e0e208f90add 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 6.5E-118 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 DDI_RS20325 5e8bbd87e5f34d5522dd2c69c1c3de89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 7.0E-15 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS20325 5e8bbd87e5f34d5522dd2c69c1c3de89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 8.9E-27 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS20325 5e8bbd87e5f34d5522dd2c69c1c3de89 46 Pfam PF00468 Ribosomal protein L34 1 44 2.8E-24 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS20325 5e8bbd87e5f34d5522dd2c69c1c3de89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.121 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS20325 5e8bbd87e5f34d5522dd2c69c1c3de89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 28-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS16705 a2b340180607f720db303e4600214737 383 SUPERFAMILY SSF52490 12 207 1.96E-69 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDI_RS16705 a2b340180607f720db303e4600214737 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DDI_RS16705 a2b340180607f720db303e4600214737 383 Gene3D G3DSA:3.40.50.1440 8 213 2.4E-42 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDI_RS16705 a2b340180607f720db303e4600214737 383 SMART SM00865 206 324 6.9E-56 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 DDI_RS16705 a2b340180607f720db303e4600214737 383 Gene3D G3DSA:3.30.1330.20 214 324 2.0E-44 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 DDI_RS16705 a2b340180607f720db303e4600214737 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 344 38.164 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 DDI_RS16705 a2b340180607f720db303e4600214737 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DDI_RS16705 a2b340180607f720db303e4600214737 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.6E-37 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal DDI_RS16705 a2b340180607f720db303e4600214737 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 8.3E-42 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDI_RS16705 a2b340180607f720db303e4600214737 383 SMART SM00864 12 204 1.6E-111 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDI_RS16705 a2b340180607f720db303e4600214737 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 336 9.3E-142 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 DDI_RS16705 a2b340180607f720db303e4600214737 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 6.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDI_RS16705 a2b340180607f720db303e4600214737 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 6.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDI_RS16705 a2b340180607f720db303e4600214737 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 6.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDI_RS16705 a2b340180607f720db303e4600214737 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 6.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDI_RS16705 a2b340180607f720db303e4600214737 383 SUPERFAMILY SSF55307 203 319 8.93E-43 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DDI_RS20025 949df7763458434059b4e10d7b93ad35 734 SUPERFAMILY SSF51126 385 714 1.38E-46 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS20025 949df7763458434059b4e10d7b93ad35 734 Gene3D G3DSA:2.160.20.10 379 730 8.9E-34 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 SUPERFAMILY SSF53706 219 687 6.68E-82 T 28-03-2018 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 SUPERFAMILY SSF54862 81 213 3.18E-34 T 28-03-2018 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 SUPERFAMILY SSF54292 1 77 8.89E-19 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 3.1E-11 T 28-03-2018 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 2.9E-10 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 Gene3D G3DSA:3.10.20.30 1 165 3.4E-11 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 Gene3D G3DSA:2.20.25.90 214 280 5.1E-10 T 28-03-2018 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 SMART SM00926 221 275 3.5E-10 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 2.5E-16 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 7.9E-203 T 28-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 SMART SM00929 88 128 2.5E-20 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 Gene3D G3DSA:2.40.40.20 824 905 1.1E-9 T 28-03-2018 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 SUPERFAMILY SSF50692 814 891 4.75E-9 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 Gene3D G3DSA:3.40.50.740 475 656 2.9E-20 T 28-03-2018 DDI_RS12695 d63edc0d9dc0d13fed4b56f28a380976 908 Gene3D G3DSA:3.40.50.740 281 455 3.0E-13 T 28-03-2018 DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 SUPERFAMILY SSF159871 240 316 4.19E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 Gene3D G3DSA:3.30.1660.10 249 316 7.9E-20 T 28-03-2018 IPR025543 Dodecin-like DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 Gene3D G3DSA:3.30.1660.10 106 175 6.9E-14 T 28-03-2018 IPR025543 Dodecin-like DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 SUPERFAMILY SSF159871 3 93 4.97E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 SUPERFAMILY SSF159871 106 179 1.96E-14 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 Gene3D G3DSA:3.30.1660.10 22 89 1.5E-16 T 28-03-2018 IPR025543 Dodecin-like DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 Pfam PF07338 Protein of unknown function (DUF1471) 262 316 7.3E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 Pfam PF07338 Protein of unknown function (DUF1471) 118 175 1.7E-14 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS09590 c216eb23e4bfdbbfb291b11beeddd605 316 Pfam PF07338 Protein of unknown function (DUF1471) 34 89 3.8E-15 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS02120 8291a4f1c75b987de521a1f6801b2967 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.0E-42 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDI_RS02120 8291a4f1c75b987de521a1f6801b2967 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.0E-42 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDI_RS02120 8291a4f1c75b987de521a1f6801b2967 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.0E-42 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDI_RS02120 8291a4f1c75b987de521a1f6801b2967 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.0E-42 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDI_RS02120 8291a4f1c75b987de521a1f6801b2967 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 1.5E-21 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDI_RS02120 8291a4f1c75b987de521a1f6801b2967 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 6.2E-26 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDI_RS00565 4bb0cb1f0afcf26617fb1a0eca6ceb7e 457 Pfam PF02378 Phosphotransferase system, EIIC 110 394 8.0E-48 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS00565 4bb0cb1f0afcf26617fb1a0eca6ceb7e 457 Gene3D G3DSA:3.30.1360.60 4 81 1.4E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS00565 4bb0cb1f0afcf26617fb1a0eca6ceb7e 457 Pfam PF00367 phosphotransferase system, EIIB 10 41 4.5E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS00565 4bb0cb1f0afcf26617fb1a0eca6ceb7e 457 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 6.2E-90 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 DDI_RS00565 4bb0cb1f0afcf26617fb1a0eca6ceb7e 457 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 4 448 1.2E-190 T 28-03-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 DDI_RS00565 4bb0cb1f0afcf26617fb1a0eca6ceb7e 457 SUPERFAMILY SSF55604 7 82 8.37E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS00565 4bb0cb1f0afcf26617fb1a0eca6ceb7e 457 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDI_RS00565 4bb0cb1f0afcf26617fb1a0eca6ceb7e 457 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 6.4E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDI_RS17365 c5178a90856abeb74fcd8d563ee40e4f 245 SUPERFAMILY SSF52540 5 238 1.14E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17365 c5178a90856abeb74fcd8d563ee40e4f 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS17365 c5178a90856abeb74fcd8d563ee40e4f 245 SMART SM00382 29 216 1.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS17365 c5178a90856abeb74fcd8d563ee40e4f 245 Pfam PF00005 ABC transporter 20 168 2.2E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS17365 c5178a90856abeb74fcd8d563ee40e4f 245 PIRSF PIRSF039085 1 244 2.1E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS17365 c5178a90856abeb74fcd8d563ee40e4f 245 Gene3D G3DSA:3.40.50.300 1 243 4.3E-75 T 28-03-2018 DDI_RS13555 7de30dcd34c281caa6a82a479f5a21ca 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 28-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 DDI_RS13555 7de30dcd34c281caa6a82a479f5a21ca 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 4.4E-40 T 28-03-2018 IPR006214 Bax inhibitor 1-related DDI_RS16805 1ba7cda2213ea320a43451ac9f23cf09 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 3.7E-166 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DDI_RS16805 1ba7cda2213ea320a43451ac9f23cf09 363 SUPERFAMILY SSF53659 2 359 9.0E-122 T 28-03-2018 DDI_RS16805 1ba7cda2213ea320a43451ac9f23cf09 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.608 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DDI_RS16805 1ba7cda2213ea320a43451ac9f23cf09 363 SMART SM01329 6 355 1.3E-199 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DDI_RS16805 1ba7cda2213ea320a43451ac9f23cf09 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.9E-135 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DDI_RS16805 1ba7cda2213ea320a43451ac9f23cf09 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DDI_RS16805 1ba7cda2213ea320a43451ac9f23cf09 363 Gene3D G3DSA:3.40.718.10 1 362 5.1E-129 T 28-03-2018 DDI_RS03095 611052be6490bbac50b1a16093b1452c 287 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 48 285 3.1E-108 T 28-03-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 DDI_RS03095 611052be6490bbac50b1a16093b1452c 287 PIRSF PIRSF005215 1 287 3.4E-135 T 28-03-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 DDI_RS03095 611052be6490bbac50b1a16093b1452c 287 Gene3D G3DSA:2.60.120.10 1 95 7.0E-37 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS03095 611052be6490bbac50b1a16093b1452c 287 Pfam PF03848 Tellurite resistance protein TehB 90 282 1.2E-97 T 28-03-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain DDI_RS03095 611052be6490bbac50b1a16093b1452c 287 SUPERFAMILY SSF51197 1 101 1.15E-35 T 28-03-2018 DDI_RS03095 611052be6490bbac50b1a16093b1452c 287 Pfam PF09313 Domain of unknown function (DUF1971) 8 88 3.7E-30 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 DDI_RS03095 611052be6490bbac50b1a16093b1452c 287 Gene3D G3DSA:3.40.50.150 96 286 5.8E-25 T 28-03-2018 DDI_RS03095 611052be6490bbac50b1a16093b1452c 287 SUPERFAMILY SSF53335 67 275 1.02E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 SUPERFAMILY SSF52317 1035 1292 6.98E-100 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Pfam PF02769 AIR synthase related protein, C-terminal domain 832 963 1.4E-10 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 586 1.6E-27 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1038 1291 2.7E-106 T 28-03-2018 DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Gene3D G3DSA:3.90.650.10 424 612 3.0E-30 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Gene3D G3DSA:3.90.650.10 819 993 4.2E-26 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 SUPERFAMILY SSF55326 220 425 5.58E-62 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 SUPERFAMILY SSF82697 1 150 2.35E-53 T 28-03-2018 DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Gene3D G3DSA:3.40.50.880 1037 1293 5.6E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 SMART SM01211 1038 1293 4.9E-160 T 28-03-2018 DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1294 21.365 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Gene3D G3DSA:3.30.1330.10 218 423 2.1E-49 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Gene3D G3DSA:3.30.1330.10 182 217 5.7E-4 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 Gene3D G3DSA:3.30.1330.10 613 811 1.1E-20 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1292 0.0 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 SUPERFAMILY SSF55326 619 814 9.68E-68 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 SUPERFAMILY SSF56042 820 1031 2.99E-55 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 SUPERFAMILY SSF109736 157 219 1.2E-20 T 28-03-2018 DDI_RS14200 e2a073c3246864164444ecf2db15cef0 1294 SUPERFAMILY SSF56042 430 613 3.44E-54 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS20525 d54cb98bce6b87cae0a0d9cf9a47faec 320 Gene3D G3DSA:3.40.50.720 104 285 5.0E-57 T 28-03-2018 DDI_RS20525 d54cb98bce6b87cae0a0d9cf9a47faec 320 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 320 66.811 T 28-03-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 DDI_RS20525 d54cb98bce6b87cae0a0d9cf9a47faec 320 Gene3D G3DSA:3.40.50.720 1 103 8.1E-25 T 28-03-2018 DDI_RS20525 d54cb98bce6b87cae0a0d9cf9a47faec 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDI_RS20525 d54cb98bce6b87cae0a0d9cf9a47faec 320 SUPERFAMILY SSF51735 96 284 1.19E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS20525 d54cb98bce6b87cae0a0d9cf9a47faec 320 SUPERFAMILY SSF52283 1 129 5.67E-26 T 28-03-2018 DDI_RS20525 d54cb98bce6b87cae0a0d9cf9a47faec 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 315 2.4E-28 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 DDI_RS20525 d54cb98bce6b87cae0a0d9cf9a47faec 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 283 3.1E-62 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DDI_RS20800 6c29c87dd673d52af403184e155b8123 377 SUPERFAMILY SSF56645 76 232 1.7E-31 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 DDI_RS20800 6c29c87dd673d52af403184e155b8123 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 222 2.9E-18 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DDI_RS20800 6c29c87dd673d52af403184e155b8123 377 Gene3D G3DSA:1.20.140.10 224 375 1.0E-15 T 28-03-2018 DDI_RS20800 6c29c87dd673d52af403184e155b8123 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 369 8.1E-10 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DDI_RS20800 6c29c87dd673d52af403184e155b8123 377 Gene3D G3DSA:2.40.110.10 129 223 1.6E-23 T 28-03-2018 DDI_RS20800 6c29c87dd673d52af403184e155b8123 377 SUPERFAMILY SSF47203 244 371 7.73E-12 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 SUPERFAMILY SSF51735 10 243 6.63E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 Gene3D G3DSA:3.40.50.720 10 173 7.7E-42 T 28-03-2018 DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 Gene3D G3DSA:3.40.50.720 174 248 3.0E-13 T 28-03-2018 DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 4.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 Pfam PF00106 short chain dehydrogenase 14 210 1.4E-50 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 211 2.8E-4 T 28-03-2018 DDI_RS09160 e7c5db100f64705f7cc5bbd3010ab0ac 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS18035 eaa59e809a82d60255552fe9d5a13937 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.741 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18035 eaa59e809a82d60255552fe9d5a13937 179 Gene3D G3DSA:3.30.1440.10 1 179 2.4E-80 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18035 eaa59e809a82d60255552fe9d5a13937 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.7E-41 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18035 eaa59e809a82d60255552fe9d5a13937 179 Pfam PF00281 Ribosomal protein L5 24 80 9.9E-29 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18035 eaa59e809a82d60255552fe9d5a13937 179 SUPERFAMILY SSF55282 4 179 1.46E-78 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18035 eaa59e809a82d60255552fe9d5a13937 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18035 eaa59e809a82d60255552fe9d5a13937 179 PIRSF PIRSF002161 1 179 3.2E-66 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 Gene3D G3DSA:3.40.190.10 90 180 3.8E-20 T 28-03-2018 DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 Gene3D G3DSA:3.40.190.10 181 267 5.6E-21 T 28-03-2018 DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 Gene3D G3DSA:1.10.10.10 1 84 3.6E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.6E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 SUPERFAMILY SSF53850 91 297 2.06E-41 T 28-03-2018 DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 SUPERFAMILY SSF46785 18 113 4.55E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05925 10fc06128d359f798adbb6d6a7d7631f 317 Pfam PF03466 LysR substrate binding domain 90 292 9.8E-42 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 479 2.3E-47 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 SUPERFAMILY SSF58104 232 517 1.7E-69 T 28-03-2018 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 SMART SM00283 265 512 5.1E-82 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 174 2.5E-12 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 12 37 3.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 3.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 3.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 3.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 3.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 Gene3D G3DSA:1.10.287.950 319 516 2.4E-45 T 28-03-2018 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 Gene3D G3DSA:1.10.287.950 79 318 8.1E-18 T 28-03-2018 DDI_RS11865 2b4c366d55e7471b26650fb6e9aa2eb4 554 SMART SM00304 212 264 0.0029 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS00015 07f5a108a5717ddcbb34577579a9d8b6 392 SUPERFAMILY SSF161098 83 196 8.18E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00015 07f5a108a5717ddcbb34577579a9d8b6 392 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 82 146 9.6E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS00015 07f5a108a5717ddcbb34577579a9d8b6 392 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 260 385 4.9E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00015 07f5a108a5717ddcbb34577579a9d8b6 392 SUPERFAMILY SSF161098 181 373 1.85E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00015 07f5a108a5717ddcbb34577579a9d8b6 392 Gene3D G3DSA:1.10.3720.10 191 392 1.8E-35 T 28-03-2018 DDI_RS00015 07f5a108a5717ddcbb34577579a9d8b6 392 Gene3D G3DSA:1.10.3720.10 18 190 6.7E-14 T 28-03-2018 DDI_RS11690 90581115cff0e04e473ec4516c668b66 287 Hamap MF_01604 Thiamine kinase [thiK]. 3 283 40.093 T 28-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 DDI_RS11690 90581115cff0e04e473ec4516c668b66 287 Pfam PF01636 Phosphotransferase enzyme family 32 237 2.4E-15 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase DDI_RS11690 90581115cff0e04e473ec4516c668b66 287 Gene3D G3DSA:3.90.1200.10 55 276 1.9E-24 T 28-03-2018 DDI_RS11690 90581115cff0e04e473ec4516c668b66 287 SUPERFAMILY SSF56112 7 274 2.33E-31 T 28-03-2018 IPR011009 Protein kinase-like domain DDI_RS14095 a65af8ea9b6e6842aaa86a31394d7438 164 SUPERFAMILY SSF46785 2 133 2.09E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14095 a65af8ea9b6e6842aaa86a31394d7438 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.0E-67 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 DDI_RS14095 a65af8ea9b6e6842aaa86a31394d7438 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 49.085 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 DDI_RS14095 a65af8ea9b6e6842aaa86a31394d7438 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DDI_RS14095 a65af8ea9b6e6842aaa86a31394d7438 164 Pfam PF02082 Transcriptional regulator 1 83 2.3E-27 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type DDI_RS14095 a65af8ea9b6e6842aaa86a31394d7438 164 Gene3D G3DSA:1.10.10.10 1 137 3.8E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14095 a65af8ea9b6e6842aaa86a31394d7438 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.8E-47 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type DDI_RS19580 a207fc561a9ca8fda0b4bb43d0b9d5c0 85 Gene3D G3DSA:3.30.1660.10 22 85 2.8E-19 T 28-03-2018 IPR025543 Dodecin-like DDI_RS19580 a207fc561a9ca8fda0b4bb43d0b9d5c0 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 1.3E-14 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS19580 a207fc561a9ca8fda0b4bb43d0b9d5c0 85 SUPERFAMILY SSF159871 3 85 1.57E-22 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS07200 17eda04a0baee7ba05c245e56f4e084b 530 SUPERFAMILY SSF161098 31 256 4.58E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07200 17eda04a0baee7ba05c245e56f4e084b 530 SUPERFAMILY SSF161098 289 521 7.85E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07200 17eda04a0baee7ba05c245e56f4e084b 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 261 1.3E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07200 17eda04a0baee7ba05c245e56f4e084b 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 349 527 2.6E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07200 17eda04a0baee7ba05c245e56f4e084b 530 Gene3D G3DSA:1.10.3720.10 282 528 1.5E-30 T 28-03-2018 DDI_RS07200 17eda04a0baee7ba05c245e56f4e084b 530 Gene3D G3DSA:1.10.3720.10 30 270 1.3E-29 T 28-03-2018 DDI_RS13620 85a7e4ee35956fd27cad579988897cde 320 Gene3D G3DSA:3.20.20.100 6 320 6.3E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS13620 85a7e4ee35956fd27cad579988897cde 320 SUPERFAMILY SSF51430 8 318 6.02E-94 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS13620 85a7e4ee35956fd27cad579988897cde 320 Pfam PF00248 Aldo/keto reductase family 20 318 5.7E-70 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 Gene3D G3DSA:3.40.50.300 1 238 5.3E-69 T 28-03-2018 DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 Gene3D G3DSA:2.40.50.140 295 346 9.8E-11 T 28-03-2018 DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 SMART SM00382 28 211 9.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 SUPERFAMILY SSF50331 236 360 2.16E-22 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 Pfam PF00005 ABC transporter 20 161 2.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 SUPERFAMILY SSF52540 4 242 6.01E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 Pfam PF08402 TOBE domain 282 353 2.9E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS01400 976e62cdca0929a86918c7a68221d6df 361 Gene3D G3DSA:2.40.50.100 240 294 1.6E-8 T 28-03-2018 DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 Pfam PF05175 Methyltransferase small domain 127 215 1.4E-18 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.808 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 Gene3D G3DSA:3.40.50.150 102 274 5.2E-38 T 28-03-2018 DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 2.4E-101 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 Gene3D G3DSA:1.10.8.10 14 101 1.9E-11 T 28-03-2018 DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 SUPERFAMILY SSF53335 15 292 1.96E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.2E-137 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DDI_RS12955 8343ea70b6f46b5b8de629a9ca7102f5 310 PIRSF PIRSF037167 2 307 5.6E-148 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DDI_RS19950 d4353bc7ae1eeb838c442e2205ca4f16 498 SUPERFAMILY SSF52540 18 288 1.12E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19950 d4353bc7ae1eeb838c442e2205ca4f16 498 Gene3D G3DSA:3.40.50.300 5 242 5.6E-19 T 28-03-2018 DDI_RS19950 d4353bc7ae1eeb838c442e2205ca4f16 498 Pfam PF12592 Protein of unknown function (DUF3763) 443 496 2.3E-22 T 28-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 DDI_RS19950 d4353bc7ae1eeb838c442e2205ca4f16 498 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 8.9E-25 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 DDI_RS19950 d4353bc7ae1eeb838c442e2205ca4f16 498 SMART SM00382 38 187 8.8E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 PRINTS PR01035 Tetracycline resistance protein signature 279 300 1.7E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 PRINTS PR01035 Tetracycline resistance protein signature 340 363 1.7E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 PRINTS PR01035 Tetracycline resistance protein signature 79 103 1.7E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 PRINTS PR01035 Tetracycline resistance protein signature 17 33 1.7E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 PRINTS PR01035 Tetracycline resistance protein signature 106 127 1.7E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.7E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 Pfam PF07690 Major Facilitator Superfamily 12 296 5.8E-36 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 Gene3D G3DSA:1.20.1250.20 3 197 1.9E-34 T 28-03-2018 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 SUPERFAMILY SSF103473 209 395 4.05E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 Gene3D G3DSA:1.20.1250.20 198 396 8.7E-24 T 28-03-2018 DDI_RS03210 e830186f5b395b20b1ad89b547900db2 397 SUPERFAMILY SSF103473 6 196 2.62E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS02180 1d948109f2698f339d8724b72d4f9b3a 339 Gene3D G3DSA:3.20.20.30 11 330 4.2E-74 T 28-03-2018 DDI_RS02180 1d948109f2698f339d8724b72d4f9b3a 339 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 327 3.4E-139 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 DDI_RS02180 1d948109f2698f339d8724b72d4f9b3a 339 Pfam PF00296 Luciferase-like monooxygenase 19 304 3.2E-33 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS02180 1d948109f2698f339d8724b72d4f9b3a 339 SUPERFAMILY SSF51679 6 327 9.16E-88 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS02285 f12f2f46353d74d90f3d62cdd8debc65 342 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 5.8E-56 T 28-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS02285 f12f2f46353d74d90f3d62cdd8debc65 342 SUPERFAMILY SSF53335 156 313 1.96E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS02285 f12f2f46353d74d90f3d62cdd8debc65 342 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 43.927 T 28-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 DDI_RS02285 f12f2f46353d74d90f3d62cdd8debc65 342 Gene3D G3DSA:3.40.50.150 159 342 4.6E-29 T 28-03-2018 DDI_RS02285 f12f2f46353d74d90f3d62cdd8debc65 342 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS02285 f12f2f46353d74d90f3d62cdd8debc65 342 Pfam PF05175 Methyltransferase small domain 168 333 8.7E-57 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 DDI_RS18235 bfb25403e7a681504c79a364faa207f6 601 SUPERFAMILY SSF51735 402 530 1.83E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS18235 bfb25403e7a681504c79a364faa207f6 601 Gene3D G3DSA:3.40.50.720 398 561 7.0E-20 T 28-03-2018 DDI_RS18235 bfb25403e7a681504c79a364faa207f6 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 599 46.896 T 28-03-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 DDI_RS18235 bfb25403e7a681504c79a364faa207f6 601 Pfam PF00999 Sodium/hydrogen exchanger family 13 373 1.1E-67 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DDI_RS18235 bfb25403e7a681504c79a364faa207f6 601 Pfam PF02254 TrkA-N domain 403 514 2.6E-25 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DDI_RS18235 bfb25403e7a681504c79a364faa207f6 601 Gene3D G3DSA:1.20.91.10 228 308 1.1E-11 T 28-03-2018 DDI_RS18235 bfb25403e7a681504c79a364faa207f6 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 3.1E-90 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 DDI_RS19840 ff6dc09029912a9246d8851f932603c6 214 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.3E-75 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DDI_RS19840 ff6dc09029912a9246d8851f932603c6 214 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 28.816 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DDI_RS19840 ff6dc09029912a9246d8851f932603c6 214 SUPERFAMILY SSF52540 16 199 3.9E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19840 ff6dc09029912a9246d8851f932603c6 214 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.2E-20 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS19840 ff6dc09029912a9246d8851f932603c6 214 Gene3D G3DSA:3.40.50.300 76 207 1.8E-14 T 28-03-2018 DDI_RS19840 ff6dc09029912a9246d8851f932603c6 214 Gene3D G3DSA:3.40.50.300 15 75 2.8E-12 T 28-03-2018 DDI_RS21285 c9ce9bcf04dd3c57057c02695d18f21e 264 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 260 62.724 T 28-03-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 DDI_RS21285 c9ce9bcf04dd3c57057c02695d18f21e 264 SUPERFAMILY SSF51556 1 258 3.03E-77 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS21285 c9ce9bcf04dd3c57057c02695d18f21e 264 Gene3D G3DSA:3.20.20.140 1 264 2.4E-79 T 28-03-2018 DDI_RS21285 c9ce9bcf04dd3c57057c02695d18f21e 264 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDI_RS21285 c9ce9bcf04dd3c57057c02695d18f21e 264 PIRSF PIRSF005902 1 262 7.2E-69 T 28-03-2018 IPR001130 TatD family GO:0016788 DDI_RS21285 c9ce9bcf04dd3c57057c02695d18f21e 264 Pfam PF01026 TatD related DNase 2 257 1.8E-64 T 28-03-2018 IPR001130 TatD family GO:0016788 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 5.9E-9 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 257 278 5.9E-9 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 289 313 5.9E-9 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 5.9E-9 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 Gene3D G3DSA:1.20.1600.10 205 375 8.1E-14 T 28-03-2018 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 Pfam PF13533 Biotin-lipoyl like 57 106 1.0E-5 T 28-03-2018 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 Pfam PF13437 HlyD family secretion protein 246 367 1.1E-19 T 28-03-2018 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 Gene3D G3DSA:2.40.50.100 57 128 6.2E-11 T 28-03-2018 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 SUPERFAMILY SSF111369 57 151 2.62E-8 T 28-03-2018 DDI_RS02675 bfc683f87098e464e87d70d7492d8f3e 385 SUPERFAMILY SSF111369 188 375 7.85E-8 T 28-03-2018 DDI_RS20705 16f2fbea44a6c4843c9f5ad922ef9334 230 Gene3D G3DSA:3.40.50.1000 73 225 5.8E-33 T 28-03-2018 IPR023214 HAD-like domain DDI_RS20705 16f2fbea44a6c4843c9f5ad922ef9334 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 181 6.6E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS20705 16f2fbea44a6c4843c9f5ad922ef9334 230 Gene3D G3DSA:1.10.150.240 29 72 1.7E-11 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 DDI_RS20705 16f2fbea44a6c4843c9f5ad922ef9334 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 113 187 4.4E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS20705 16f2fbea44a6c4843c9f5ad922ef9334 230 SUPERFAMILY SSF56784 2 214 5.6E-60 T 28-03-2018 IPR023214 HAD-like domain DDI_RS20705 16f2fbea44a6c4843c9f5ad922ef9334 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 187 2.1E-35 T 28-03-2018 IPR023214 HAD-like domain DDI_RS20705 16f2fbea44a6c4843c9f5ad922ef9334 230 Gene3D G3DSA:3.40.50.1000 3 28 0.31 T 28-03-2018 IPR023214 HAD-like domain DDI_RS05670 af8c5ea93632fcb282eaf4fa6f071ea4 316 SUPERFAMILY SSF51215 46 152 1.83E-13 T 28-03-2018 DDI_RS05670 af8c5ea93632fcb282eaf4fa6f071ea4 316 Gene3D G3DSA:1.10.10.60 265 314 4.9E-10 T 28-03-2018 DDI_RS05670 af8c5ea93632fcb282eaf4fa6f071ea4 316 Gene3D G3DSA:2.60.120.280 33 204 2.3E-13 T 28-03-2018 DDI_RS05670 af8c5ea93632fcb282eaf4fa6f071ea4 316 Pfam PF02311 AraC-like ligand binding domain 46 109 4.5E-11 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DDI_RS05670 af8c5ea93632fcb282eaf4fa6f071ea4 316 Pfam PF12833 Helix-turn-helix domain 233 311 6.1E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS05670 af8c5ea93632fcb282eaf4fa6f071ea4 316 Gene3D G3DSA:1.10.10.60 205 264 0.011 T 28-03-2018 DDI_RS05670 af8c5ea93632fcb282eaf4fa6f071ea4 316 SUPERFAMILY SSF46689 267 313 9.41E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS05670 af8c5ea93632fcb282eaf4fa6f071ea4 316 SMART SM00342 226 310 1.2E-13 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 Pfam PF09312 SurA N-terminal domain 25 142 4.2E-42 T 28-03-2018 IPR015391 SurA N-terminal DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 Gene3D G3DSA:3.10.50.40 280 386 1.2E-31 T 28-03-2018 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 SUPERFAMILY SSF54534 173 276 4.71E-27 T 28-03-2018 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 SUPERFAMILY SSF54534 283 385 4.78E-32 T 28-03-2018 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 SUPERFAMILY SSF109998 25 201 3.24E-43 T 28-03-2018 IPR027304 Trigger factor/SurA domain DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 212 232 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 Pfam PF00639 PPIC-type PPIASE domain 289 380 4.1E-26 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 Pfam PF00639 PPIC-type PPIASE domain 179 272 3.9E-17 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 Gene3D G3DSA:1.10.4030.10 21 149 3.3E-26 T 28-03-2018 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 Hamap MF_01183 Chaperone SurA [surA]. 9 428 33.678 T 28-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 DDI_RS16930 e849a7d639ee4b9e0d3e584997f888f3 430 Gene3D G3DSA:3.10.50.40 163 279 8.1E-22 T 28-03-2018 DDI_RS05325 085f8688ce8237469de998063a92457f 676 SUPERFAMILY SSF57770 142 176 1.44E-12 T 28-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDI_RS05325 085f8688ce8237469de998063a92457f 676 Pfam PF09334 tRNA synthetases class I (M) 8 396 5.3E-163 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS05325 085f8688ce8237469de998063a92457f 676 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 545 676 3.2E-44 T 28-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDI_RS05325 085f8688ce8237469de998063a92457f 676 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDI_RS05325 085f8688ce8237469de998063a92457f 676 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDI_RS05325 085f8688ce8237469de998063a92457f 676 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDI_RS05325 085f8688ce8237469de998063a92457f 676 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDI_RS05325 085f8688ce8237469de998063a92457f 676 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDI_RS05325 085f8688ce8237469de998063a92457f 676 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDI_RS05325 085f8688ce8237469de998063a92457f 676 Gene3D G3DSA:2.20.28.20 142 175 2.6E-15 T 28-03-2018 DDI_RS05325 085f8688ce8237469de998063a92457f 676 Gene3D G3DSA:2.40.50.140 566 676 9.3E-25 T 28-03-2018 DDI_RS05325 085f8688ce8237469de998063a92457f 676 SUPERFAMILY SSF52374 176 387 1.55E-101 T 28-03-2018 DDI_RS05325 085f8688ce8237469de998063a92457f 676 SUPERFAMILY SSF52374 6 141 1.55E-101 T 28-03-2018 DDI_RS05325 085f8688ce8237469de998063a92457f 676 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 2.4E-199 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDI_RS05325 085f8688ce8237469de998063a92457f 676 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.129 T 28-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDI_RS05325 085f8688ce8237469de998063a92457f 676 SUPERFAMILY SSF47323 390 545 3.92E-43 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS05325 085f8688ce8237469de998063a92457f 676 Pfam PF01588 Putative tRNA binding domain 580 673 2.5E-21 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DDI_RS05325 085f8688ce8237469de998063a92457f 676 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS05325 085f8688ce8237469de998063a92457f 676 Gene3D G3DSA:3.40.50.620 250 370 9.9E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS05325 085f8688ce8237469de998063a92457f 676 Gene3D G3DSA:2.170.220.10 181 249 2.5E-14 T 28-03-2018 DDI_RS05325 085f8688ce8237469de998063a92457f 676 Gene3D G3DSA:3.40.50.620 5 136 3.3E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS05325 085f8688ce8237469de998063a92457f 676 Gene3D G3DSA:1.10.730.10 373 536 7.7E-36 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS05325 085f8688ce8237469de998063a92457f 676 SUPERFAMILY SSF50249 569 675 1.08E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 Pfam PF00361 Proton-conducting membrane transporter 137 429 1.3E-96 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 62 86 3.3E-7 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 362 384 3.3E-7 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 421 443 3.3E-7 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 88 108 3.3E-7 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 229 250 5.0E-54 T 28-03-2018 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 422 441 5.0E-54 T 28-03-2018 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 114 134 5.0E-54 T 28-03-2018 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 161 182 5.0E-54 T 28-03-2018 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 251 277 5.0E-54 T 28-03-2018 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 86 111 5.0E-54 T 28-03-2018 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 319 331 5.0E-54 T 28-03-2018 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 613 5.2E-228 T 28-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12670 db788bc7388e9ca71d4196a4df390a74 616 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 68 125 1.1E-20 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS06935 42a93709191cc07e2b243b14fd1b724d 915 SUPERFAMILY SSF52540 477 854 1.95E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06935 42a93709191cc07e2b243b14fd1b724d 915 Gene3D G3DSA:3.40.50.300 425 839 3.6E-21 T 28-03-2018 DDI_RS06935 42a93709191cc07e2b243b14fd1b724d 915 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 3 81 5.3E-15 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB DDI_RS06935 42a93709191cc07e2b243b14fd1b724d 915 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 271 472 3.0E-37 T 28-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 DDI_RS00290 c03e849ba13bfe3e8da31b41d918bce6 84 Pfam PF01722 BolA-like protein 18 74 4.9E-16 T 28-03-2018 IPR002634 BolA protein DDI_RS00290 c03e849ba13bfe3e8da31b41d918bce6 84 PIRSF PIRSF003113 1 83 5.4E-24 T 28-03-2018 IPR002634 BolA protein DDI_RS00290 c03e849ba13bfe3e8da31b41d918bce6 84 SUPERFAMILY SSF82657 2 81 2.75E-30 T 28-03-2018 IPR002634 BolA protein DDI_RS00290 c03e849ba13bfe3e8da31b41d918bce6 84 Gene3D G3DSA:3.30.300.90 1 83 4.7E-27 T 28-03-2018 DDI_RS14625 da4337a537d82dd25e6d25fac0462783 244 SMART SM00479 7 184 2.5E-49 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDI_RS14625 da4337a537d82dd25e6d25fac0462783 244 SUPERFAMILY SSF53098 7 185 2.86E-54 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS14625 da4337a537d82dd25e6d25fac0462783 244 Pfam PF00929 Exonuclease 9 175 1.6E-39 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDI_RS14625 da4337a537d82dd25e6d25fac0462783 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 226 3.2E-88 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS14625 da4337a537d82dd25e6d25fac0462783 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 243 1.1E-93 T 28-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDI_RS14625 da4337a537d82dd25e6d25fac0462783 244 Gene3D G3DSA:3.30.420.10 2 191 1.8E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS05610 78551d96a7f94e1f8e436e4065c99433 325 SUPERFAMILY SSF53098 134 286 6.07E-30 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS05610 78551d96a7f94e1f8e436e4065c99433 325 Gene3D G3DSA:1.10.10.60 5 107 2.2E-7 T 28-03-2018 DDI_RS05610 78551d96a7f94e1f8e436e4065c99433 325 Gene3D G3DSA:3.30.420.10 128 324 3.0E-31 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS05610 78551d96a7f94e1f8e436e4065c99433 325 Pfam PF13565 Homeodomain-like domain 34 110 3.5E-8 T 28-03-2018 DDI_RS05610 78551d96a7f94e1f8e436e4065c99433 325 Pfam PF00665 Integrase core domain 135 242 5.9E-16 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 DDI_RS05610 78551d96a7f94e1f8e436e4065c99433 325 SUPERFAMILY SSF46689 7 112 1.43E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS13585 a4bd86b1a67d309eeb4d95913c2b34b0 152 Pfam PF02142 MGS-like domain 32 118 7.0E-19 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS13585 a4bd86b1a67d309eeb4d95913c2b34b0 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.3E-66 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DDI_RS13585 a4bd86b1a67d309eeb4d95913c2b34b0 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 28-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DDI_RS13585 a4bd86b1a67d309eeb4d95913c2b34b0 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 37.649 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DDI_RS13585 a4bd86b1a67d309eeb4d95913c2b34b0 152 SUPERFAMILY SSF52335 6 151 8.5E-57 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS13585 a4bd86b1a67d309eeb4d95913c2b34b0 152 PIRSF PIRSF006614 8 151 6.1E-65 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DDI_RS13585 a4bd86b1a67d309eeb4d95913c2b34b0 152 SMART SM00851 25 118 1.4E-25 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS13585 a4bd86b1a67d309eeb4d95913c2b34b0 152 Gene3D G3DSA:3.40.50.1380 1 152 1.2E-42 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 SMART SM01004 9 333 5.0E-237 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.6E-137 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 Gene3D G3DSA:3.20.20.70 2 337 5.7E-149 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 7.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 7.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 7.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 7.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 7.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 7.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 SUPERFAMILY SSF51569 7 335 2.78E-141 T 28-03-2018 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 PIRSF PIRSF001415 3 336 1.2E-150 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS21290 a0842b7f187582501f35301bb46755a2 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 SUPERFAMILY SSF52540 301 543 2.02E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 Pfam PF00005 ABC transporter 22 177 4.9E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 Pfam PF00005 ABC transporter 321 472 2.0E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 SMART SM00382 29 227 4.0E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 SMART SM00382 330 522 7.6E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 257 1.7E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 524 550 6.9E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 Gene3D G3DSA:3.40.50.300 298 556 4.7E-74 T 28-03-2018 DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 Gene3D G3DSA:3.40.50.300 1 277 5.4E-70 T 28-03-2018 DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 SUPERFAMILY SSF52540 4 248 1.89E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10425 b2e5b05c5fc36a9d0206ca175eb263c1 565 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 SMART SM00283 269 516 4.8E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 SUPERFAMILY SSF58104 246 520 8.11E-69 T 28-03-2018 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 1.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.3E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 Gene3D G3DSA:1.10.287.950 330 520 8.5E-47 T 28-03-2018 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 185 6.7E-23 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 Gene3D G3DSA:1.10.287.1060 247 329 0.067 T 28-03-2018 DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 Gene3D G3DSA:1.20.120.30 25 185 1.6E-12 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS19290 acddcb22baa04712c08baffda352d40f 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 1.6E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS08290 6de769148ff4f973a031a7e93e78102e 296 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 9 294 5.0E-141 T 28-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 DDI_RS08290 6de769148ff4f973a031a7e93e78102e 296 PIRSF PIRSF015582 1 296 5.4E-75 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like DDI_RS08290 6de769148ff4f973a031a7e93e78102e 296 Gene3D G3DSA:3.20.20.60 1 241 4.9E-46 T 28-03-2018 DDI_RS08290 6de769148ff4f973a031a7e93e78102e 296 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 229 3.6E-76 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DDI_RS08290 6de769148ff4f973a031a7e93e78102e 296 SUPERFAMILY SSF51621 8 239 3.21E-58 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS12090 96c87e5a1b1865dc7eea9dbe7f0b2181 399 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 381 2.1E-92 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G DDI_RS12090 96c87e5a1b1865dc7eea9dbe7f0b2181 399 Gene3D G3DSA:2.60.98.20 146 281 1.3E-26 T 28-03-2018 IPR011491 Flagellar hook protein FlgE DDI_RS12090 96c87e5a1b1865dc7eea9dbe7f0b2181 399 SUPERFAMILY SSF117143 72 360 5.36E-75 T 28-03-2018 DDI_RS12090 96c87e5a1b1865dc7eea9dbe7f0b2181 399 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 321 398 2.5E-18 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DDI_RS12090 96c87e5a1b1865dc7eea9dbe7f0b2181 399 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site DDI_RS12090 96c87e5a1b1865dc7eea9dbe7f0b2181 399 Pfam PF00460 Flagella basal body rod protein 4 33 2.3E-11 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DDI_RS12090 96c87e5a1b1865dc7eea9dbe7f0b2181 399 Pfam PF07559 Flagellar basal body protein FlaE 173 280 3.3E-17 T 28-03-2018 IPR011491 Flagellar hook protein FlgE DDI_RS04230 239706e9c8cbe2a3fea085ef7cec4c2c 454 Gene3D G3DSA:1.20.1250.20 207 404 3.0E-16 T 28-03-2018 DDI_RS04230 239706e9c8cbe2a3fea085ef7cec4c2c 454 SUPERFAMILY SSF103473 1 391 1.96E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS04230 239706e9c8cbe2a3fea085ef7cec4c2c 454 Gene3D G3DSA:1.20.1250.20 4 199 2.0E-32 T 28-03-2018 DDI_RS04230 239706e9c8cbe2a3fea085ef7cec4c2c 454 Pfam PF07690 Major Facilitator Superfamily 18 355 4.4E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS11515 d7d5906b2aa39b75a5c035bb9c7ebcc3 263 Pfam PF00005 ABC transporter 32 165 3.0E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS11515 d7d5906b2aa39b75a5c035bb9c7ebcc3 263 SUPERFAMILY SSF52540 17 217 4.99E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11515 d7d5906b2aa39b75a5c035bb9c7ebcc3 263 Gene3D G3DSA:3.40.50.300 16 219 8.7E-57 T 28-03-2018 DDI_RS11515 d7d5906b2aa39b75a5c035bb9c7ebcc3 263 SMART SM00382 41 215 9.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11515 d7d5906b2aa39b75a5c035bb9c7ebcc3 263 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS17445 0447fc5935b5b062bafd3a92b3fe43f3 315 Gene3D G3DSA:3.40.190.10 163 249 1.3E-12 T 28-03-2018 DDI_RS17445 0447fc5935b5b062bafd3a92b3fe43f3 315 SUPERFAMILY SSF53850 62 294 4.87E-43 T 28-03-2018 DDI_RS17445 0447fc5935b5b062bafd3a92b3fe43f3 315 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 67 294 9.7E-37 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS17445 0447fc5935b5b062bafd3a92b3fe43f3 315 SMART SM00062 63 297 2.5E-25 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS17445 0447fc5935b5b062bafd3a92b3fe43f3 315 Gene3D G3DSA:3.40.190.10 57 162 5.2E-19 T 28-03-2018 DDI_RS14145 d24c728680f7302a3edcfeb65d34f229 417 Gene3D G3DSA:3.90.1150.10 276 416 1.6E-60 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS14145 d24c728680f7302a3edcfeb65d34f229 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DDI_RS14145 d24c728680f7302a3edcfeb65d34f229 417 Gene3D G3DSA:3.40.640.10 37 275 1.3E-54 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS14145 d24c728680f7302a3edcfeb65d34f229 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.62 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DDI_RS14145 d24c728680f7302a3edcfeb65d34f229 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 4.1E-188 T 28-03-2018 DDI_RS14145 d24c728680f7302a3edcfeb65d34f229 417 PIRSF PIRSF000412 1 417 3.9E-175 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DDI_RS14145 d24c728680f7302a3edcfeb65d34f229 417 SUPERFAMILY SSF53383 6 416 1.77E-186 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS09110 9f2f4d5f609166485b4368d694170e8b 269 Gene3D G3DSA:3.20.20.70 2 269 1.2E-73 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS09110 9f2f4d5f609166485b4368d694170e8b 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.5E-102 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDI_RS09110 9f2f4d5f609166485b4368d694170e8b 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.958 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDI_RS09110 9f2f4d5f609166485b4368d694170e8b 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDI_RS09110 9f2f4d5f609166485b4368d694170e8b 269 SUPERFAMILY SSF51366 1 266 1.13E-90 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 DDI_RS09110 9f2f4d5f609166485b4368d694170e8b 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 6.3E-96 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDI_RS15185 4096f93721b806a9d45df58aa2e59d6a 221 Gene3D G3DSA:1.10.3720.10 2 217 1.6E-36 T 28-03-2018 DDI_RS15185 4096f93721b806a9d45df58aa2e59d6a 221 SUPERFAMILY SSF161098 14 202 1.01E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15185 4096f93721b806a9d45df58aa2e59d6a 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 4.8E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS15185 4096f93721b806a9d45df58aa2e59d6a 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 214 1.1E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12875 0a281595470bd7e9a0a1e6465c8865d9 224 SUPERFAMILY SSF46894 140 218 1.79E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS12875 0a281595470bd7e9a0a1e6465c8865d9 224 Gene3D G3DSA:1.10.10.10 124 224 1.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12875 0a281595470bd7e9a0a1e6465c8865d9 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 3.3E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS12875 0a281595470bd7e9a0a1e6465c8865d9 224 SMART SM00862 144 217 6.1E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS12875 0a281595470bd7e9a0a1e6465c8865d9 224 Pfam PF00072 Response regulator receiver domain 4 112 4.3E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS12875 0a281595470bd7e9a0a1e6465c8865d9 224 Gene3D G3DSA:3.40.50.2300 1 123 1.1E-38 T 28-03-2018 DDI_RS12875 0a281595470bd7e9a0a1e6465c8865d9 224 SMART SM00448 1 112 7.1E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS12875 0a281595470bd7e9a0a1e6465c8865d9 224 SUPERFAMILY SSF52172 1 132 5.98E-40 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS18560 e73010d90d026dfaab00df38fd10bca6 145 Gene3D G3DSA:3.30.70.1150 37 128 3.5E-34 T 28-03-2018 DDI_RS18560 e73010d90d026dfaab00df38fd10bca6 145 SUPERFAMILY SSF47598 1 40 5.78E-9 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS18560 e73010d90d026dfaab00df38fd10bca6 145 Gene3D G3DSA:1.10.1220.10 2 36 1.7E-10 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS18560 e73010d90d026dfaab00df38fd10bca6 145 SUPERFAMILY SSF55021 53 133 1.05E-25 T 28-03-2018 DDI_RS18560 e73010d90d026dfaab00df38fd10bca6 145 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 40 5.9E-9 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 DDI_RS18560 e73010d90d026dfaab00df38fd10bca6 145 Pfam PF08753 NikR C terminal nickel binding domain 54 130 3.6E-30 T 28-03-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal DDI_RS18560 e73010d90d026dfaab00df38fd10bca6 145 Hamap MF_00476 Nickel-responsive regulator [nikR]. 1 132 26.284 T 28-03-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 DDI_RS12665 4b6158dd487124d43917ed136820133d 511 Pfam PF00361 Proton-conducting membrane transporter 134 430 5.0E-69 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12665 4b6158dd487124d43917ed136820133d 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 2.8E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12665 4b6158dd487124d43917ed136820133d 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 2.8E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12665 4b6158dd487124d43917ed136820133d 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 2.8E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12665 4b6158dd487124d43917ed136820133d 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 2.8E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12665 4b6158dd487124d43917ed136820133d 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 2.8E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12665 4b6158dd487124d43917ed136820133d 511 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 1.5E-177 T 28-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS08350 ebee62926e10d52f58f3f5b71a84c491 337 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 326 41.438 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 DDI_RS08350 ebee62926e10d52f58f3f5b71a84c491 337 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 319 3.7E-104 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 DDI_RS08350 ebee62926e10d52f58f3f5b71a84c491 337 Gene3D G3DSA:3.40.50.300 46 285 2.6E-9 T 28-03-2018 DDI_RS08350 ebee62926e10d52f58f3f5b71a84c491 337 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 8.2E-117 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 DDI_RS08350 ebee62926e10d52f58f3f5b71a84c491 337 SUPERFAMILY SSF52540 46 183 9.3E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20100 2ca21a4d30eed97f439066a19b7e48f5 772 SUPERFAMILY SSF82866 610 767 4.71E-16 T 28-03-2018 DDI_RS20100 2ca21a4d30eed97f439066a19b7e48f5 772 SUPERFAMILY SSF82866 221 405 4.58E-17 T 28-03-2018 DDI_RS20100 2ca21a4d30eed97f439066a19b7e48f5 772 Gene3D G3DSA:1.20.1640.10 604 710 1.8E-10 T 28-03-2018 DDI_RS20100 2ca21a4d30eed97f439066a19b7e48f5 772 Gene3D G3DSA:1.20.1640.10 716 767 0.009 T 28-03-2018 DDI_RS20100 2ca21a4d30eed97f439066a19b7e48f5 772 Gene3D G3DSA:1.20.1640.10 212 413 1.3E-17 T 28-03-2018 DDI_RS19665 bf6efcbc5e5dcdc9889e60ef42c86ec3 41 Gene3D G3DSA:3.30.1660.10 4 40 6.0E-9 T 28-03-2018 IPR025543 Dodecin-like DDI_RS19665 bf6efcbc5e5dcdc9889e60ef42c86ec3 41 SUPERFAMILY SSF159871 9 41 2.88E-8 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS19665 bf6efcbc5e5dcdc9889e60ef42c86ec3 41 Pfam PF07338 Protein of unknown function (DUF1471) 10 41 3.1E-9 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS04570 6d37147457f2892453f5dd67a86a0ab2 263 SUPERFAMILY SSF53474 4 251 3.19E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS04570 6d37147457f2892453f5dd67a86a0ab2 263 Gene3D G3DSA:3.40.50.1820 5 252 9.0E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS04570 6d37147457f2892453f5dd67a86a0ab2 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 12 251 34.313 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 DDI_RS04570 6d37147457f2892453f5dd67a86a0ab2 263 Pfam PF12697 Alpha/beta hydrolase family 16 244 2.3E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS04570 6d37147457f2892453f5dd67a86a0ab2 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 13 250 1.2E-78 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 DDI_RS20270 342f779213fadf40b207086443dd4e81 325 Gene3D G3DSA:3.40.50.880 3 210 1.1E-51 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS20270 342f779213fadf40b207086443dd4e81 325 SUPERFAMILY SSF46689 266 315 2.2E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20270 342f779213fadf40b207086443dd4e81 325 SUPERFAMILY SSF46689 212 263 6.27E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20270 342f779213fadf40b207086443dd4e81 325 Pfam PF01965 DJ-1/PfpI family 8 173 3.3E-10 T 28-03-2018 IPR002818 DJ-1/PfpI DDI_RS20270 342f779213fadf40b207086443dd4e81 325 SUPERFAMILY SSF52317 7 194 6.78E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS20270 342f779213fadf40b207086443dd4e81 325 SMART SM00342 229 312 1.4E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS20270 342f779213fadf40b207086443dd4e81 325 Gene3D G3DSA:1.10.10.60 211 267 8.6E-13 T 28-03-2018 DDI_RS20270 342f779213fadf40b207086443dd4e81 325 Gene3D G3DSA:1.10.10.60 268 315 5.8E-12 T 28-03-2018 DDI_RS20270 342f779213fadf40b207086443dd4e81 325 Pfam PF12833 Helix-turn-helix domain 235 313 3.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS14110 46fce082591893b152d70aeca767ee1d 374 Gene3D G3DSA:3.40.50.1980 168 347 4.7E-36 T 28-03-2018 DDI_RS14110 46fce082591893b152d70aeca767ee1d 374 Pfam PF01497 Periplasmic binding protein 99 317 9.3E-22 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 DDI_RS14110 46fce082591893b152d70aeca767ee1d 374 Gene3D G3DSA:3.40.50.1980 26 167 3.3E-16 T 28-03-2018 DDI_RS14110 46fce082591893b152d70aeca767ee1d 374 SUPERFAMILY SSF53807 31 362 1.81E-49 T 28-03-2018 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.304 T 28-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 2.1E-80 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 SUPERFAMILY SSF51735 271 562 3.64E-94 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 Gene3D G3DSA:3.40.50.10380 15 268 2.0E-116 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 PIRSF PIRSF000106 3 563 1.6E-229 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 SMART SM01274 81 261 4.7E-112 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 Gene3D G3DSA:3.40.50.720 269 564 1.3E-106 T 28-03-2018 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 SMART SM00919 271 531 2.8E-135 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 4.4E-103 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 SUPERFAMILY SSF53223 6 270 1.51E-111 T 28-03-2018 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 PRINTS PR00072 Malic enzyme signature 267 283 6.6E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 PRINTS PR00072 Malic enzyme signature 87 111 6.6E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 PRINTS PR00072 Malic enzyme signature 242 260 6.6E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 PRINTS PR00072 Malic enzyme signature 183 205 6.6E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 PRINTS PR00072 Malic enzyme signature 408 424 6.6E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 PRINTS PR00072 Malic enzyme signature 147 176 6.6E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DDI_RS07110 a9e3ecc45c941e552ae0c696c4af7c0e 565 PRINTS PR00072 Malic enzyme signature 298 314 6.6E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 181 5.2E-20 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 SUPERFAMILY SSF56784 4 203 1.25E-43 T 28-03-2018 IPR023214 HAD-like domain DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 Gene3D G3DSA:3.40.50.1000 70 209 4.2E-26 T 28-03-2018 IPR023214 HAD-like domain DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 Gene3D G3DSA:3.40.50.1000 1 32 0.082 T 28-03-2018 IPR023214 HAD-like domain DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 Gene3D G3DSA:1.10.150.240 33 69 2.4E-16 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 2.6E-23 T 28-03-2018 IPR023214 HAD-like domain DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 3.6E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 3.6E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.6E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS12745 b07b52d0da05a0297f40756052c4e85b 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 3.6E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS16725 036530d5487a584f45d430f2f9a400b9 363 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.463 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS16725 036530d5487a584f45d430f2f9a400b9 363 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 346 8.1E-113 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS16725 036530d5487a584f45d430f2f9a400b9 363 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 341 1.3E-37 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 DDI_RS16725 036530d5487a584f45d430f2f9a400b9 363 Gene3D G3DSA:3.40.50.2000 175 337 3.1E-32 T 28-03-2018 DDI_RS16725 036530d5487a584f45d430f2f9a400b9 363 SUPERFAMILY SSF53756 6 351 2.3E-129 T 28-03-2018 DDI_RS16725 036530d5487a584f45d430f2f9a400b9 363 Gene3D G3DSA:3.40.50.2000 1 174 9.9E-46 T 28-03-2018 DDI_RS16725 036530d5487a584f45d430f2f9a400b9 363 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 6.7E-48 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDI_RS00950 9d451feed5010b499a07539644ac632e 160 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 5.4E-30 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 DDI_RS00950 9d451feed5010b499a07539644ac632e 160 PIRSF PIRSF018267 1 149 2.4E-49 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 DDI_RS00950 9d451feed5010b499a07539644ac632e 160 SUPERFAMILY SSF52980 2 151 6.43E-51 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDI_RS00950 9d451feed5010b499a07539644ac632e 160 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 1.1E-46 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 DDI_RS00950 9d451feed5010b499a07539644ac632e 160 Gene3D G3DSA:3.40.960.10 21 156 1.3E-30 T 28-03-2018 DDI_RS07960 52ba34f24a03f27bf483ad1183d2b329 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.516 T 28-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK DDI_RS07960 52ba34f24a03f27bf483ad1183d2b329 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 7.2E-73 T 28-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 DDI_RS07960 52ba34f24a03f27bf483ad1183d2b329 300 Gene3D G3DSA:3.30.1490.20 115 170 7.2E-12 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS07960 52ba34f24a03f27bf483ad1183d2b329 300 Gene3D G3DSA:3.30.470.20 171 277 2.6E-35 T 28-03-2018 DDI_RS07960 52ba34f24a03f27bf483ad1183d2b329 300 Gene3D G3DSA:3.40.50.20 1 114 7.1E-36 T 28-03-2018 DDI_RS07960 52ba34f24a03f27bf483ad1183d2b329 300 SUPERFAMILY SSF56059 98 288 7.26E-49 T 28-03-2018 DDI_RS07960 52ba34f24a03f27bf483ad1183d2b329 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 9.4E-92 T 28-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 DDI_RS06310 5fd7726eb288bbf363128cdfefe6fe7b 527 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 350 522 4.0E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06310 5fd7726eb288bbf363128cdfefe6fe7b 527 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 260 1.4E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06310 5fd7726eb288bbf363128cdfefe6fe7b 527 Gene3D G3DSA:1.10.3720.10 20 264 6.9E-24 T 28-03-2018 DDI_RS06310 5fd7726eb288bbf363128cdfefe6fe7b 527 SUPERFAMILY SSF161098 327 513 3.27E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06310 5fd7726eb288bbf363128cdfefe6fe7b 527 SUPERFAMILY SSF161098 69 257 1.11E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06310 5fd7726eb288bbf363128cdfefe6fe7b 527 Gene3D G3DSA:1.10.3720.10 325 524 7.7E-26 T 28-03-2018 DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 407 455 1.0E-10 T 28-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 28-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 SUPERFAMILY SSF75005 23 336 1.57E-107 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 Gene3D G3DSA:2.115.10.20 36 345 3.1E-100 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 20 443 3.1E-162 T 28-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 SMART SM00640 31 433 1.1E-141 T 28-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 SUPERFAMILY SSF49899 338 467 1.74E-18 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 8.6E-104 T 28-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DDI_RS00560 6af415e80f46c19dc8d7b463d01e6ea7 470 Gene3D G3DSA:2.60.120.560 346 464 1.4E-11 T 28-03-2018 DDI_RS10070 5e95ed2fe6b3d0801ed93ec1653b7365 210 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 1.0E-77 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 DDI_RS10070 5e95ed2fe6b3d0801ed93ec1653b7365 210 SUPERFAMILY SSF101322 2 208 1.18E-78 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 DDI_RS10070 5e95ed2fe6b3d0801ed93ec1653b7365 210 Gene3D G3DSA:1.10.3890.10 4 206 1.1E-78 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 DDI_RS10070 5e95ed2fe6b3d0801ed93ec1653b7365 210 Pfam PF04356 Protein of unknown function (DUF489) 7 198 4.2E-76 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 DDI_RS10070 5e95ed2fe6b3d0801ed93ec1653b7365 210 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 35.997 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 DDI_RS09775 ccbad520de1554bda6ad81b45ef75c6f 218 Gene3D G3DSA:3.90.850.10 10 217 1.0E-70 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 DDI_RS09775 ccbad520de1554bda6ad81b45ef75c6f 218 SUPERFAMILY SSF56529 11 211 1.19E-67 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 DDI_RS09775 ccbad520de1554bda6ad81b45ef75c6f 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 208 7.5E-55 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 DDI_RS09215 992a64f8468f425766026dccd720e46a 647 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.3E-28 T 28-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain DDI_RS09215 992a64f8468f425766026dccd720e46a 647 SUPERFAMILY SSF46548 337 444 4.88E-22 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS09215 992a64f8468f425766026dccd720e46a 647 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 647 228.568 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 DDI_RS09215 992a64f8468f425766026dccd720e46a 647 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 446 6.2E-180 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 DDI_RS09215 992a64f8468f425766026dccd720e46a 647 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS09215 992a64f8468f425766026dccd720e46a 647 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS09215 992a64f8468f425766026dccd720e46a 647 Gene3D G3DSA:3.30.70.20 312 383 5.1E-5 T 28-03-2018 DDI_RS09215 992a64f8468f425766026dccd720e46a 647 Pfam PF10531 SLBB domain 296 345 3.3E-10 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS09215 992a64f8468f425766026dccd720e46a 647 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.0E-44 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS09215 992a64f8468f425766026dccd720e46a 647 Gene3D G3DSA:3.30.70.20 384 486 8.9E-18 T 28-03-2018 DDI_RS09215 992a64f8468f425766026dccd720e46a 647 Pfam PF12838 4Fe-4S dicluster domain 377 431 2.4E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS09215 992a64f8468f425766026dccd720e46a 647 SUPERFAMILY SSF142019 95 303 5.62E-57 T 28-03-2018 DDI_RS07330 3f0d62d4cdd709dc526a908f48fca62d 322 Gene3D G3DSA:3.40.1030.10 81 321 1.0E-42 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS07330 3f0d62d4cdd709dc526a908f48fca62d 322 Gene3D G3DSA:1.20.970.10 1 71 1.6E-14 T 28-03-2018 DDI_RS07330 3f0d62d4cdd709dc526a908f48fca62d 322 SUPERFAMILY SSF52418 74 320 2.35E-47 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS07330 3f0d62d4cdd709dc526a908f48fca62d 322 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.4E-9 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS07330 3f0d62d4cdd709dc526a908f48fca62d 322 SUPERFAMILY SSF47648 7 72 8.77E-14 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 9.2E-70 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 120 132 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 287 304 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 266 281 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 249 264 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 192 219 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 339 352 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 60 78 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 26 42 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 PRINTS PR00992 Alanine racemase signature 155 166 2.6E-67 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 SUPERFAMILY SSF50621 227 357 1.12E-41 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 Gene3D G3DSA:3.20.20.10 1 216 3.6E-43 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 SMART SM01005 233 357 8.7E-58 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 Hamap MF_01201 Alanine racemase. 1 357 33.735 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 TIGRFAM TIGR00492 alr: alanine racemase 3 357 2.4E-129 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 SUPERFAMILY SSF51419 8 234 7.71E-69 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 Gene3D G3DSA:2.40.37.10 217 358 1.1E-49 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS16015 a4648daa38f8194adf8ece9a9e6829ea 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 354 5.1E-37 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS10330 e1f784ee7103dc55998f1c4d38e429af 184 SUPERFAMILY SSF88659 125 182 1.64E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS10330 e1f784ee7103dc55998f1c4d38e429af 184 Pfam PF04542 Sigma-70 region 2 27 92 2.5E-10 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS10330 e1f784ee7103dc55998f1c4d38e429af 184 Gene3D G3DSA:1.10.1740.10 17 89 3.8E-17 T 28-03-2018 DDI_RS10330 e1f784ee7103dc55998f1c4d38e429af 184 Gene3D G3DSA:1.10.10.10 90 184 3.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10330 e1f784ee7103dc55998f1c4d38e429af 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 181 7.6E-26 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS10330 e1f784ee7103dc55998f1c4d38e429af 184 SUPERFAMILY SSF88946 22 107 3.69E-17 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS10330 e1f784ee7103dc55998f1c4d38e429af 184 Pfam PF08281 Sigma-70, region 4 128 175 4.6E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS07320 d8722dc2666bed7ad86cdde7f8ae287b 35 Hamap MF_01362 UPF0387 membrane protein YohO [yohO]. 1 35 15.262 T 28-03-2018 IPR020870 Uncharacterised protein family UPF0387, membrane GO:0005886 DDI_RS07360 04e344786069d53ec8dacca96253c8b8 240 Gene3D G3DSA:3.40.50.300 1 240 4.8E-76 T 28-03-2018 DDI_RS07360 04e344786069d53ec8dacca96253c8b8 240 Pfam PF00005 ABC transporter 17 165 2.8E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07360 04e344786069d53ec8dacca96253c8b8 240 PIRSF PIRSF039085 1 240 1.6E-109 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS07360 04e344786069d53ec8dacca96253c8b8 240 SUPERFAMILY SSF52540 1 235 2.53E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07360 04e344786069d53ec8dacca96253c8b8 240 SMART SM00382 26 213 1.9E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07360 04e344786069d53ec8dacca96253c8b8 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS18300 76a55b073a6180d369f741dbf06a97f2 208 SUPERFAMILY SSF53955 21 208 3.37E-48 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS18300 76a55b073a6180d369f741dbf06a97f2 208 Gene3D G3DSA:3.30.20.10 93 152 8.8E-22 T 28-03-2018 DDI_RS18300 76a55b073a6180d369f741dbf06a97f2 208 Pfam PF00182 Chitinase class I 114 167 5.7E-16 T 28-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DDI_RS04530 d7534fd731f2fcb9ca039add7f83767f 239 Gene3D G3DSA:3.40.50.150 7 237 6.8E-45 T 28-03-2018 DDI_RS04530 d7534fd731f2fcb9ca039add7f83767f 239 SUPERFAMILY SSF53335 9 216 2.43E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS04530 d7534fd731f2fcb9ca039add7f83767f 239 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 14 232 2.6E-84 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DDI_RS04530 d7534fd731f2fcb9ca039add7f83767f 239 Pfam PF13489 Methyltransferase domain 55 200 6.5E-23 T 28-03-2018 DDI_RS04530 d7534fd731f2fcb9ca039add7f83767f 239 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 12 238 36.761 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DDI_RS15555 d746373540ec61e504acd400e6528534 450 SUPERFAMILY SSF103473 14 444 4.71E-81 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS15555 d746373540ec61e504acd400e6528534 450 Gene3D G3DSA:1.20.1250.20 10 217 4.4E-35 T 28-03-2018 DDI_RS15555 d746373540ec61e504acd400e6528534 450 Gene3D G3DSA:1.20.1250.20 239 446 4.2E-27 T 28-03-2018 DDI_RS15555 d746373540ec61e504acd400e6528534 450 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 1.4E-155 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS15555 d746373540ec61e504acd400e6528534 450 PIRSF PIRSF002808 2 447 1.6E-45 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS15555 d746373540ec61e504acd400e6528534 450 Pfam PF07690 Major Facilitator Superfamily 25 320 5.6E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS03540 122d8b8b614aafe08c686ba698d119a1 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.8E-73 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS03540 122d8b8b614aafe08c686ba698d119a1 346 Gene3D G3DSA:3.20.20.100 1 346 3.7E-94 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS03540 122d8b8b614aafe08c686ba698d119a1 346 SUPERFAMILY SSF51430 1 344 1.02E-106 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS00475 a1372fa1f6ca3760a44e5823c25b76c7 245 SMART SM00563 67 182 1.1E-37 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS00475 a1372fa1f6ca3760a44e5823c25b76c7 245 Pfam PF01553 Acyltransferase 56 180 3.3E-31 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS00475 a1372fa1f6ca3760a44e5823c25b76c7 245 Gene3D G3DSA:3.40.1130.10 31 245 1.4E-41 T 28-03-2018 DDI_RS00475 a1372fa1f6ca3760a44e5823c25b76c7 245 SUPERFAMILY SSF69593 2 241 1.83E-61 T 28-03-2018 DDI_RS00475 a1372fa1f6ca3760a44e5823c25b76c7 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.8E-46 T 28-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 DDI_RS13120 6bc3a15d2eeb865fa3a3f20235926e40 162 Gene3D G3DSA:3.30.1360.100 84 159 4.0E-18 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain DDI_RS13120 6bc3a15d2eeb865fa3a3f20235926e40 162 PIRSF PIRSF006291 1 160 1.2E-31 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 DDI_RS13120 6bc3a15d2eeb865fa3a3f20235926e40 162 Pfam PF04612 Type II secretion system (T2SS), protein M 1 159 2.3E-37 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 DDI_RS13120 6bc3a15d2eeb865fa3a3f20235926e40 162 SUPERFAMILY SSF103054 83 159 4.45E-18 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain DDI_RS02915 98be27ddb676029799225ea4cdcaf503 144 Gene3D G3DSA:3.30.530.20 1 144 7.8E-31 T 28-03-2018 IPR023393 START-like domain DDI_RS02915 98be27ddb676029799225ea4cdcaf503 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 3.0E-30 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 DDI_RS02915 98be27ddb676029799225ea4cdcaf503 144 SUPERFAMILY SSF55961 1 142 4.58E-34 T 28-03-2018 DDI_RS11750 f885c2d1e99307e2cd4b3bcacef89517 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.317 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DDI_RS11750 f885c2d1e99307e2cd4b3bcacef89517 78 Gene3D G3DSA:1.10.1200.10 1 78 1.2E-27 T 28-03-2018 DDI_RS11750 f885c2d1e99307e2cd4b3bcacef89517 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 4.7E-37 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DDI_RS11750 f885c2d1e99307e2cd4b3bcacef89517 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.004 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DDI_RS11750 f885c2d1e99307e2cd4b3bcacef89517 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.8E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS11750 f885c2d1e99307e2cd4b3bcacef89517 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site DDI_RS11750 f885c2d1e99307e2cd4b3bcacef89517 78 SUPERFAMILY SSF47336 2 76 1.7E-23 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS11265 138be69f0424a4c29c9226ebce2df6df 153 SMART SM00347 28 127 9.9E-4 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS11265 138be69f0424a4c29c9226ebce2df6df 153 Pfam PF12802 MarR family 33 89 1.7E-8 T 28-03-2018 DDI_RS11265 138be69f0424a4c29c9226ebce2df6df 153 SUPERFAMILY SSF46785 10 144 2.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS11265 138be69f0424a4c29c9226ebce2df6df 153 Gene3D G3DSA:1.10.10.10 8 146 2.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21470 8477fef80674d5c972c8f1d00c87e5dd 365 Pfam PF06674 Protein of unknown function (DUF1176) 34 359 2.9E-80 T 28-03-2018 IPR009560 Protein of unknown function DUF1176 DDI_RS15640 955b63f1acfec04a83dc6420c8425ed5 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDI_RS15640 955b63f1acfec04a83dc6420c8425ed5 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 8.1E-55 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDI_RS15640 955b63f1acfec04a83dc6420c8425ed5 176 Gene3D G3DSA:3.90.80.10 2 176 5.8E-53 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDI_RS15640 955b63f1acfec04a83dc6420c8425ed5 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.113 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDI_RS15640 955b63f1acfec04a83dc6420c8425ed5 176 SUPERFAMILY SSF50324 4 174 4.19E-67 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDI_RS08710 5226eac58937210d6f8d29b2f6385878 340 Gene3D G3DSA:3.40.50.1980 30 220 6.4E-45 T 28-03-2018 DDI_RS08710 5226eac58937210d6f8d29b2f6385878 340 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 324 7.3E-58 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DDI_RS08710 5226eac58937210d6f8d29b2f6385878 340 SUPERFAMILY SSF53807 32 337 2.99E-75 T 28-03-2018 DDI_RS08710 5226eac58937210d6f8d29b2f6385878 340 Gene3D G3DSA:3.40.50.1980 221 338 4.7E-24 T 28-03-2018 DDI_RS08310 98db2a0e6d34c2309d2bd0858f58a8e9 250 Gene3D G3DSA:2.40.10.220 117 250 6.8E-14 T 28-03-2018 DDI_RS08310 98db2a0e6d34c2309d2bd0858f58a8e9 250 Gene3D G3DSA:2.30.110.10 14 116 5.4E-26 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS08310 98db2a0e6d34c2309d2bd0858f58a8e9 250 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 7 246 28.354 T 28-03-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 DDI_RS08310 98db2a0e6d34c2309d2bd0858f58a8e9 250 Pfam PF07238 PilZ domain 118 236 9.4E-7 T 28-03-2018 IPR009875 PilZ domain GO:0035438 DDI_RS08310 98db2a0e6d34c2309d2bd0858f58a8e9 250 Pfam PF07317 Flagellar regulator YcgR 12 115 4.3E-29 T 28-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DDI_RS03565 c64e406423bb8250ef630c7f83d252c5 175 SUPERFAMILY SSF55811 6 154 4.87E-32 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS03565 c64e406423bb8250ef630c7f83d252c5 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.1E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDI_RS03565 c64e406423bb8250ef630c7f83d252c5 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.1E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDI_RS03565 c64e406423bb8250ef630c7f83d252c5 175 Pfam PF00293 NUDIX domain 7 145 3.7E-27 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS03565 c64e406423bb8250ef630c7f83d252c5 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDI_RS03565 c64e406423bb8250ef630c7f83d252c5 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.417 T 28-03-2018 IPR022927 RNA pyrophosphohydrolase RppH DDI_RS03565 c64e406423bb8250ef630c7f83d252c5 175 Gene3D G3DSA:3.90.79.10 1 164 1.6E-34 T 28-03-2018 DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 Gene3D G3DSA:3.20.20.80 1 464 2.4E-150 T 28-03-2018 DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 Pfam PF00232 Glycosyl hydrolase family 1 2 460 2.7E-167 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 358 366 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 SUPERFAMILY SSF51445 3 456 1.59E-158 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 400 417 8.2E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 358 366 8.2E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 379 390 8.2E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 8.2E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS11355 b8b59d90a3fbf047ca324bf590c992f2 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 425 437 8.2E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS13660 886aa7b6ca81cd02c344ea823be3333d 320 Pfam PF13409 Glutathione S-transferase, N-terminal domain 51 144 6.6E-18 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS13660 886aa7b6ca81cd02c344ea823be3333d 320 Gene3D G3DSA:3.40.30.10 24 174 8.0E-30 T 28-03-2018 DDI_RS13660 886aa7b6ca81cd02c344ea823be3333d 320 Pfam PF13410 Glutathione S-transferase, C-terminal domain 189 261 4.5E-16 T 28-03-2018 DDI_RS13660 886aa7b6ca81cd02c344ea823be3333d 320 SUPERFAMILY SSF52833 35 148 1.57E-10 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS13660 886aa7b6ca81cd02c344ea823be3333d 320 PIRSF PIRSF015753 8 309 5.3E-119 T 28-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 DDI_RS13660 886aa7b6ca81cd02c344ea823be3333d 320 SUPERFAMILY SSF47616 164 310 1.13E-32 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS13660 886aa7b6ca81cd02c344ea823be3333d 320 Gene3D G3DSA:1.20.1050.10 175 312 5.7E-41 T 28-03-2018 DDI_RS07190 bf7c40bcd7b4c300a60873294319ceae 149 Gene3D G3DSA:3.90.1170.40 1 148 1.6E-56 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDI_RS07190 bf7c40bcd7b4c300a60873294319ceae 149 Pfam PF02391 MoaE protein 9 120 5.5E-36 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDI_RS07190 bf7c40bcd7b4c300a60873294319ceae 149 SUPERFAMILY SSF54690 4 149 5.36E-54 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.3E-14 T 28-03-2018 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.3E-14 T 28-03-2018 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 3.3E-14 T 28-03-2018 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.3E-14 T 28-03-2018 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 SUPERFAMILY SSF51905 265 382 1.94E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 SUPERFAMILY SSF51905 2 175 1.94E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 1.4E-144 T 28-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 Gene3D G3DSA:3.50.50.60 2 352 1.2E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 388 7.7E-129 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DDI_RS01190 b942d3fb686b4223ee6275264133936e 392 Pfam PF01494 FAD binding domain 2 342 1.3E-24 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.3E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 SMART SM00862 146 221 1.1E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 Gene3D G3DSA:1.10.10.10 122 226 1.7E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 SMART SM00448 1 112 1.1E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 SUPERFAMILY SSF52172 1 118 4.84E-38 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 SUPERFAMILY SSF46894 123 222 2.27E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 Gene3D G3DSA:3.40.50.2300 1 121 1.9E-31 T 28-03-2018 DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 Pfam PF00072 Response regulator receiver domain 3 113 7.9E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS02500 597ae3addd432b82936bcc62993f1b98 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.2E-95 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 DDI_RS06415 2fe1c4e770364caece12a56a00d138a4 299 Gene3D G3DSA:1.10.10.10 1 90 1.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06415 2fe1c4e770364caece12a56a00d138a4 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 60 1.4E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06415 2fe1c4e770364caece12a56a00d138a4 299 Gene3D G3DSA:3.40.190.10 180 265 2.3E-14 T 28-03-2018 DDI_RS06415 2fe1c4e770364caece12a56a00d138a4 299 Pfam PF03466 LysR substrate binding domain 93 290 5.7E-31 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS06415 2fe1c4e770364caece12a56a00d138a4 299 Gene3D G3DSA:3.40.190.10 92 179 1.6E-16 T 28-03-2018 DDI_RS06415 2fe1c4e770364caece12a56a00d138a4 299 SUPERFAMILY SSF46785 2 85 1.9E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06415 2fe1c4e770364caece12a56a00d138a4 299 SUPERFAMILY SSF53850 95 295 1.85E-30 T 28-03-2018 DDI_RS21145 c1b010c1f9dac4d896e8126a2f4300e7 326 SUPERFAMILY SSF53756 1 322 1.76E-76 T 28-03-2018 DDI_RS21145 c1b010c1f9dac4d896e8126a2f4300e7 326 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 316 9.7E-128 T 28-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 DDI_RS21145 c1b010c1f9dac4d896e8126a2f4300e7 326 Gene3D G3DSA:3.40.50.2000 1 163 5.7E-40 T 28-03-2018 DDI_RS21145 c1b010c1f9dac4d896e8126a2f4300e7 326 Gene3D G3DSA:3.40.50.2000 164 325 7.0E-35 T 28-03-2018 DDI_RS21145 c1b010c1f9dac4d896e8126a2f4300e7 326 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 299 2.3E-74 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 DDI_RS14840 ae791846cb7905fcd2df5c0f357bde8d 177 Pfam PF01292 Prokaryotic cytochrome b561 5 174 3.8E-21 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DDI_RS14840 ae791846cb7905fcd2df5c0f357bde8d 177 Gene3D G3DSA:1.20.950.20 1 177 8.8E-23 T 28-03-2018 DDI_RS14840 ae791846cb7905fcd2df5c0f357bde8d 177 SUPERFAMILY SSF81342 3 174 2.12E-25 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DDI_RS07520 8611d1a7bfba5dca978ce1e4c814e9ca 336 Gene3D G3DSA:1.10.10.60 283 332 4.3E-9 T 28-03-2018 DDI_RS07520 8611d1a7bfba5dca978ce1e4c814e9ca 336 Pfam PF12833 Helix-turn-helix domain 257 332 4.0E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS07520 8611d1a7bfba5dca978ce1e4c814e9ca 336 SMART SM00342 250 332 2.9E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS07520 8611d1a7bfba5dca978ce1e4c814e9ca 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 18 205 2.1E-18 T 28-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DDI_RS07520 8611d1a7bfba5dca978ce1e4c814e9ca 336 SUPERFAMILY SSF46689 286 332 1.11E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS07520 8611d1a7bfba5dca978ce1e4c814e9ca 336 Gene3D G3DSA:1.10.10.60 97 282 0.013 T 28-03-2018 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 Gene3D G3DSA:4.10.520.10 1 94 3.1E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.0E-29 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 SMART SM00411 1 91 5.4E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 SUPERFAMILY SSF47729 1 91 6.33E-30 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 3.0E-51 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DDI_RS08195 2239f8322ca8451360e3c7c0c689f78c 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.445 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DDI_RS00575 8f9300ea7d572e6d29478f52c984fa6a 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS00575 8f9300ea7d572e6d29478f52c984fa6a 307 PRINTS PR00990 Ribokinase signature 176 191 1.0E-7 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS00575 8f9300ea7d572e6d29478f52c984fa6a 307 PRINTS PR00990 Ribokinase signature 216 227 1.0E-7 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS00575 8f9300ea7d572e6d29478f52c984fa6a 307 PRINTS PR00990 Ribokinase signature 23 42 1.0E-7 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS00575 8f9300ea7d572e6d29478f52c984fa6a 307 Pfam PF00294 pfkB family carbohydrate kinase 3 298 2.9E-66 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB DDI_RS00575 8f9300ea7d572e6d29478f52c984fa6a 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS00575 8f9300ea7d572e6d29478f52c984fa6a 307 Gene3D G3DSA:3.40.1190.20 3 307 3.4E-73 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS00575 8f9300ea7d572e6d29478f52c984fa6a 307 SUPERFAMILY SSF53613 2 304 5.77E-81 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS06065 cf791d485b47d92527aec385d84cddfb 287 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 282 1.8E-82 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DDI_RS06065 cf791d485b47d92527aec385d84cddfb 287 SUPERFAMILY SSF161098 89 275 3.4E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06065 cf791d485b47d92527aec385d84cddfb 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 282 3.1E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06065 cf791d485b47d92527aec385d84cddfb 287 Gene3D G3DSA:1.10.3720.10 3 286 8.6E-24 T 28-03-2018 DDI_RS16625 e2ef2d666f0d0ad294056101a72899e4 186 SMART SM00644 16 166 7.0E-50 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDI_RS16625 e2ef2d666f0d0ad294056101a72899e4 186 Gene3D G3DSA:3.40.80.10 1 186 1.1E-51 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDI_RS16625 e2ef2d666f0d0ad294056101a72899e4 186 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 167 2.3E-26 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDI_RS16625 e2ef2d666f0d0ad294056101a72899e4 186 SUPERFAMILY SSF55846 3 180 1.19E-65 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDI_RS04965 f94c13011e6c18cc20c49d319b2cbe54 383 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 376 3.9E-152 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DDI_RS04965 f94c13011e6c18cc20c49d319b2cbe54 383 PIRSF PIRSF038994 1 383 1.1E-115 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DDI_RS04965 f94c13011e6c18cc20c49d319b2cbe54 383 SUPERFAMILY SSF51338 1 53 1.92E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS04965 f94c13011e6c18cc20c49d319b2cbe54 383 Gene3D G3DSA:2.30.40.10 2 66 1.1E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS04965 f94c13011e6c18cc20c49d319b2cbe54 383 Pfam PF01979 Amidohydrolase family 51 379 2.1E-40 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 DDI_RS04965 f94c13011e6c18cc20c49d319b2cbe54 383 Gene3D G3DSA:3.20.20.140 67 350 2.8E-94 T 28-03-2018 DDI_RS04965 f94c13011e6c18cc20c49d319b2cbe54 383 SUPERFAMILY SSF51556 54 350 2.83E-102 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS15220 4e524eab5c04e0946db2cc94bb70c794 315 SUPERFAMILY SSF88713 12 313 7.51E-85 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DDI_RS15220 4e524eab5c04e0946db2cc94bb70c794 315 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 13 313 3.1E-160 T 28-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 DDI_RS15220 4e524eab5c04e0946db2cc94bb70c794 315 Gene3D G3DSA:3.20.20.370 9 315 6.7E-57 T 28-03-2018 DDI_RS15220 4e524eab5c04e0946db2cc94bb70c794 315 Pfam PF01522 Polysaccharide deacetylase 83 170 7.1E-6 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DDI_RS18190 67e143a708a2a1d655a4a0b2cd883ecd 320 SUPERFAMILY SSF53850 160 290 1.66E-12 T 28-03-2018 DDI_RS18190 67e143a708a2a1d655a4a0b2cd883ecd 320 SUPERFAMILY SSF53850 3 130 1.66E-12 T 28-03-2018 DDI_RS18190 67e143a708a2a1d655a4a0b2cd883ecd 320 Gene3D G3DSA:3.40.190.10 80 209 1.6E-16 T 28-03-2018 DDI_RS00590 4246da8d3429a7e7662f49ee469f41a9 150 Gene3D G3DSA:2.30.110.10 4 149 3.5E-13 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS00590 4246da8d3429a7e7662f49ee469f41a9 150 PIRSF PIRSF009554 3 148 4.7E-59 T 28-03-2018 IPR011194 Uncharacterised protein family UPF0306 DDI_RS00590 4246da8d3429a7e7662f49ee469f41a9 150 SUPERFAMILY SSF50475 10 145 2.04E-17 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS00590 4246da8d3429a7e7662f49ee469f41a9 150 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 33.621 T 28-03-2018 IPR011194 Uncharacterised protein family UPF0306 DDI_RS12830 ee0907b29361f755c2acc80dddb81c52 293 SUPERFAMILY SSF110997 214 288 1.31E-13 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS12830 ee0907b29361f755c2acc80dddb81c52 293 Gene3D G3DSA:3.30.70.1070 210 290 2.2E-9 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS12830 ee0907b29361f755c2acc80dddb81c52 293 Pfam PF05036 Sporulation related domain 214 288 1.9E-9 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS12830 ee0907b29361f755c2acc80dddb81c52 293 Hamap MF_02022 Cell division protein DedD [dedD]. 10 292 26.909 T 28-03-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 DDI_RS02240 e51e96897ed0eab5606a0cc1287592ab 219 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 17 217 2.5E-48 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein DDI_RS02240 e51e96897ed0eab5606a0cc1287592ab 219 Pfam PF01168 Alanine racemase, N-terminal domain 7 217 1.0E-25 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDI_RS02240 e51e96897ed0eab5606a0cc1287592ab 219 Gene3D G3DSA:3.20.20.10 1 219 1.4E-48 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS02240 e51e96897ed0eab5606a0cc1287592ab 219 PIRSF PIRSF004848 1 219 2.7E-58 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein DDI_RS02240 e51e96897ed0eab5606a0cc1287592ab 219 SUPERFAMILY SSF51419 5 215 8.78E-62 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS07175 ed0fa863672db9c3b59a410cf20cd5b6 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DDI_RS07175 ed0fa863672db9c3b59a410cf20cd5b6 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 11 152 1.3E-35 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS07175 ed0fa863672db9c3b59a410cf20cd5b6 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 1.1E-76 T 28-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 DDI_RS07175 ed0fa863672db9c3b59a410cf20cd5b6 170 Gene3D G3DSA:3.40.980.10 3 170 2.4E-32 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS07175 ed0fa863672db9c3b59a410cf20cd5b6 170 PIRSF PIRSF006443 1 165 6.1E-60 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 DDI_RS07175 ed0fa863672db9c3b59a410cf20cd5b6 170 SUPERFAMILY SSF53218 7 168 1.02E-42 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS07175 ed0fa863672db9c3b59a410cf20cd5b6 170 SMART SM00852 14 158 1.4E-25 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS07175 ed0fa863672db9c3b59a410cf20cd5b6 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 3.8E-31 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 80 3.1E-19 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 SUPERFAMILY SSF47757 19 94 9.68E-25 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 1.8E-45 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 1.8E-45 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 1.8E-45 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 1.8E-45 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 1.8E-45 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 PRINTS PR00996 Glutamate methyltransferase family signature 121 141 1.8E-45 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 SMART SM00138 27 287 5.2E-111 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 PIRSF PIRSF000410 10 288 3.3E-98 T 28-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 Gene3D G3DSA:1.10.155.10 19 93 6.6E-27 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 282 1.3E-57 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 Gene3D G3DSA:3.40.50.150 94 287 2.1E-46 T 28-03-2018 DDI_RS12155 a866acf4824326e24742ef662d3223bc 290 SUPERFAMILY SSF53335 95 284 6.16E-59 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 Pfam PF01037 Lrp/AsnC ligand binding domain 78 145 2.3E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 SUPERFAMILY SSF54909 69 154 5.77E-20 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 Gene3D G3DSA:3.30.70.920 61 154 1.1E-21 T 28-03-2018 DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 SUPERFAMILY SSF46785 6 68 3.88E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 2.9E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 Gene3D G3DSA:1.10.10.10 8 59 7.1E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.4E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.4E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.4E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS19960 a463373cd46f0c4d9bf6d6092a899741 154 SMART SM00344 8 115 1.9E-46 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DDI_RS09040 c874ab42982559cf64c7945819331d31 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 322 6.6E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS09040 c874ab42982559cf64c7945819331d31 329 SUPERFAMILY SSF52540 41 307 1.11E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09040 c874ab42982559cf64c7945819331d31 329 SMART SM00382 40 246 6.9E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09040 c874ab42982559cf64c7945819331d31 329 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS09040 c874ab42982559cf64c7945819331d31 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 304 1.1E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS09040 c874ab42982559cf64c7945819331d31 329 Gene3D G3DSA:3.40.50.300 8 324 1.4E-73 T 28-03-2018 DDI_RS09040 c874ab42982559cf64c7945819331d31 329 Pfam PF00005 ABC transporter 32 188 2.1E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14400 fa4317aa9eff73e16fd5eb139e8d3629 320 Gene3D G3DSA:3.40.50.1820 225 315 2.4E-10 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS14400 fa4317aa9eff73e16fd5eb139e8d3629 320 Gene3D G3DSA:3.40.50.1820 34 224 1.4E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS14400 fa4317aa9eff73e16fd5eb139e8d3629 320 Pfam PF07859 alpha/beta hydrolase fold 76 295 4.2E-20 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 DDI_RS14400 fa4317aa9eff73e16fd5eb139e8d3629 320 SUPERFAMILY SSF53474 54 316 1.33E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS12400 1d5457dccc9fc439abc66634b38da294 467 PIRSF PIRSF006060 8 466 1.6E-66 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS12400 1d5457dccc9fc439abc66634b38da294 467 Pfam PF00324 Amino acid permease 25 463 4.4E-112 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 DDI_RS12400 1d5457dccc9fc439abc66634b38da294 467 ProSitePatterns PS00218 Amino acid permeases signature. 50 80 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DDI_RS01055 3eea374d01dd20bfb476126854e9c850 349 Pfam PF00005 ABC transporter 47 204 4.0E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS01055 3eea374d01dd20bfb476126854e9c850 349 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 256 322 1.2E-15 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS01055 3eea374d01dd20bfb476126854e9c850 349 Gene3D G3DSA:3.40.50.300 23 346 1.1E-72 T 28-03-2018 DDI_RS01055 3eea374d01dd20bfb476126854e9c850 349 SUPERFAMILY SSF52540 54 337 2.49E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01055 3eea374d01dd20bfb476126854e9c850 349 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 254 340 4.2E-22 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS01055 3eea374d01dd20bfb476126854e9c850 349 SMART SM00382 55 254 1.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 Pfam PF03958 Bacterial type II/III secretion system short domain 129 189 6.3E-11 T 28-03-2018 IPR005644 NolW-like DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 Pfam PF03958 Bacterial type II/III secretion system short domain 196 262 8.1E-14 T 28-03-2018 IPR005644 NolW-like DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 Pfam PF03958 Bacterial type II/III secretion system short domain 269 401 2.2E-13 T 28-03-2018 IPR005644 NolW-like DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 33 659 3.8E-172 T 28-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 505 1.2E-42 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 639 653 1.2E-42 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 616 634 1.2E-42 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 401 411 1.2E-42 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 516 526 1.2E-42 T 28-03-2018 IPR001775 GspD/PilQ family DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 Pfam PF00263 Bacterial type II and III secretion system protein 485 652 1.1E-50 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 DDI_RS13165 bb604303ae553678ba09fa6f6f2c6be1 714 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 597 630 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.456 T 28-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 2.9E-27 T 28-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 240 2.2E-30 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 Gene3D G3DSA:3.40.50.720 1 103 1.2E-21 T 28-03-2018 DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 Gene3D G3DSA:3.40.50.720 104 257 1.4E-28 T 28-03-2018 DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 279 7.0E-18 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 SUPERFAMILY SSF51735 91 241 6.63E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 SUPERFAMILY SSF52283 4 110 3.83E-18 T 28-03-2018 DDI_RS12865 0064836fdad7b9cbefe8572fcf42e445 377 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DDI_RS00495 e303041649d04db863fcd446a39497e5 304 Pfam PF12833 Helix-turn-helix domain 214 289 1.6E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS00495 e303041649d04db863fcd446a39497e5 304 SUPERFAMILY SSF46689 191 242 8.48E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS00495 e303041649d04db863fcd446a39497e5 304 Gene3D G3DSA:1.10.10.60 185 245 5.0E-15 T 28-03-2018 DDI_RS00495 e303041649d04db863fcd446a39497e5 304 SMART SM00342 208 291 1.4E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS00495 e303041649d04db863fcd446a39497e5 304 SUPERFAMILY SSF46689 244 291 2.51E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS00495 e303041649d04db863fcd446a39497e5 304 Gene3D G3DSA:1.10.10.60 246 297 6.4E-11 T 28-03-2018 DDI_RS00495 e303041649d04db863fcd446a39497e5 304 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 179 5.1E-41 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DDI_RS03910 7a9cea068cf26bd44e3d9d161ea7ae18 1005 Pfam PF02543 Carbamoyltransferase N-terminus 446 679 1.3E-22 T 28-03-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 DDI_RS03910 7a9cea068cf26bd44e3d9d161ea7ae18 1005 Pfam PF02543 Carbamoyltransferase N-terminus 354 419 1.4E-8 T 28-03-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 DDI_RS03910 7a9cea068cf26bd44e3d9d161ea7ae18 1005 SUPERFAMILY SSF53067 354 535 2.85E-10 T 28-03-2018 DDI_RS03910 7a9cea068cf26bd44e3d9d161ea7ae18 1005 SUPERFAMILY SSF53067 587 685 2.85E-10 T 28-03-2018 DDI_RS03910 7a9cea068cf26bd44e3d9d161ea7ae18 1005 Gene3D G3DSA:3.30.420.40 348 472 5.5E-16 T 28-03-2018 DDI_RS03910 7a9cea068cf26bd44e3d9d161ea7ae18 1005 Pfam PF16861 Carbamoyltransferase C-terminus 732 901 1.2E-60 T 28-03-2018 IPR031730 Carbamoyltransferase, C-terminal DDI_RS15830 e55d0601e7b74f2a4d7a64005065a253 151 SUPERFAMILY SSF55729 5 148 1.12E-36 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS15830 e55d0601e7b74f2a4d7a64005065a253 151 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 1.6E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS15830 e55d0601e7b74f2a4d7a64005065a253 151 Gene3D G3DSA:3.40.630.30 3 150 1.5E-32 T 28-03-2018 DDI_RS03955 c5631bc5b723db676b475b9dab36b633 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 365 388 3.8E-6 T 28-03-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DDI_RS03955 c5631bc5b723db676b475b9dab36b633 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 143 164 3.8E-6 T 28-03-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DDI_RS03955 c5631bc5b723db676b475b9dab36b633 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 300 323 3.8E-6 T 28-03-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DDI_RS03955 c5631bc5b723db676b475b9dab36b633 406 SUPERFAMILY SSF103473 8 398 3.92E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS03955 c5631bc5b723db676b475b9dab36b633 406 Pfam PF05977 Transmembrane secretion effector 3 389 5.4E-43 T 28-03-2018 IPR010290 Transmembrane secretion effector DDI_RS03955 c5631bc5b723db676b475b9dab36b633 406 Gene3D G3DSA:1.20.1250.20 1 198 1.9E-19 T 28-03-2018 DDI_RS03955 c5631bc5b723db676b475b9dab36b633 406 Gene3D G3DSA:1.20.1250.20 209 406 3.1E-10 T 28-03-2018 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 Gene3D G3DSA:2.60.120.260 97 283 2.8E-6 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS20310 735fa5e446739f195be6616eda10d043 543 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 530 2.0E-68 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 65 86 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 157 177 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 216 234 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 2 23 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 496 519 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 412 435 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 321 341 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 459 481 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR00701 60kDa inner membrane protein signature 248 263 5.2E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 2.8E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 2.8E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 2.8E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 Pfam PF02096 60Kd inner membrane protein 351 530 1.0E-59 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 Pfam PF14849 YidC periplasmic domain 60 340 2.0E-88 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal DDI_RS20310 735fa5e446739f195be6616eda10d043 543 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 26.584 T 28-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 DDI_RS20310 735fa5e446739f195be6616eda10d043 543 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 3.7E-116 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 46.21 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 2.0E-204 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 Gene3D G3DSA:3.90.1150.10 290 407 1.2E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 Gene3D G3DSA:3.40.640.10 60 289 3.9E-76 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 Pfam PF00202 Aminotransferase class-III 25 399 1.7E-133 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 399 1.4E-154 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 SUPERFAMILY SSF53383 18 400 2.31E-128 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 PIRSF PIRSF000521 25 156 5.4E-8 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS18275 23529e1729326ff15c4ed821a0ff6401 407 PIRSF PIRSF000521 173 403 3.1E-31 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS13225 cf7e625cc28cd8a465835b4edc195557 62 Pfam PF14070 Putative motility protein 6 61 9.5E-18 T 28-03-2018 IPR025906 Putative motility protein DDI_RS05110 4b9f22e1fa31040d042aada8e64ee2eb 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 9.3E-31 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05110 4b9f22e1fa31040d042aada8e64ee2eb 238 Gene3D G3DSA:3.10.20.30 1 106 1.5E-32 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS05110 4b9f22e1fa31040d042aada8e64ee2eb 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 4.5E-10 T 28-03-2018 DDI_RS05110 4b9f22e1fa31040d042aada8e64ee2eb 238 Gene3D G3DSA:1.10.1060.10 107 238 6.5E-31 T 28-03-2018 DDI_RS05110 4b9f22e1fa31040d042aada8e64ee2eb 238 SUPERFAMILY SSF54292 1 106 1.73E-30 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS05110 4b9f22e1fa31040d042aada8e64ee2eb 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 4.6E-90 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05110 4b9f22e1fa31040d042aada8e64ee2eb 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS05110 4b9f22e1fa31040d042aada8e64ee2eb 238 SUPERFAMILY SSF46548 107 236 2.27E-40 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS03555 095b257c963a3957d4822f40723723bc 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 150.507 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 DDI_RS03555 095b257c963a3957d4822f40723723bc 228 SUPERFAMILY SSF52980 7 227 1.39E-79 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDI_RS03555 095b257c963a3957d4822f40723723bc 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 1.2E-32 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 DDI_RS03555 095b257c963a3957d4822f40723723bc 228 SMART SM00927 59 157 1.4E-63 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 DDI_RS03555 095b257c963a3957d4822f40723723bc 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 1.6E-106 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 DDI_RS03555 095b257c963a3957d4822f40723723bc 228 Gene3D G3DSA:3.40.600.10 3 228 5.6E-57 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 DDI_RS10285 8c53e7b6ef44eca74bdc912786ea8959 437 SUPERFAMILY SSF47090 366 435 2.04E-15 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS10285 8c53e7b6ef44eca74bdc912786ea8959 437 Gene3D G3DSA:1.10.530.10 240 361 9.4E-31 T 28-03-2018 DDI_RS10285 8c53e7b6ef44eca74bdc912786ea8959 437 SUPERFAMILY SSF53955 58 362 4.31E-86 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS10285 8c53e7b6ef44eca74bdc912786ea8959 437 Gene3D G3DSA:1.10.8.350 132 234 1.8E-29 T 28-03-2018 DDI_RS10285 8c53e7b6ef44eca74bdc912786ea8959 437 Pfam PF01471 Putative peptidoglycan binding domain 380 434 1.9E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS10285 8c53e7b6ef44eca74bdc912786ea8959 437 Pfam PF13406 Transglycosylase SLT domain 66 358 1.4E-100 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 DDI_RS10285 8c53e7b6ef44eca74bdc912786ea8959 437 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 67 361 1.1E-99 T 28-03-2018 IPR011970 Lytic murein transglycosylase DDI_RS10285 8c53e7b6ef44eca74bdc912786ea8959 437 Gene3D G3DSA:1.10.101.10 362 436 7.8E-13 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS19105 b92d87b58287b3b5f5f08223ea9e7e9f 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 4.5E-126 T 28-03-2018 DDI_RS19105 b92d87b58287b3b5f5f08223ea9e7e9f 305 Pfam PF01040 UbiA prenyltransferase family 28 265 3.9E-38 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DDI_RS19105 b92d87b58287b3b5f5f08223ea9e7e9f 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 20.87 T 28-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DDI_RS19105 b92d87b58287b3b5f5f08223ea9e7e9f 305 PIRSF PIRSF005355 1 305 8.9E-89 T 28-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 DDI_RS21210 dd368d8c2466a2f0adefae162717f186 275 Pfam PF01738 Dienelactone hydrolase family 50 272 4.6E-74 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 DDI_RS21210 dd368d8c2466a2f0adefae162717f186 275 SUPERFAMILY SSF53474 40 271 3.56E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS21210 dd368d8c2466a2f0adefae162717f186 275 Gene3D G3DSA:3.40.50.1820 33 272 1.8E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS11620 4d3b181b44992a7dfcaf84cce0d58dfe 235 SUPERFAMILY SSF52540 6 227 1.77E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11620 4d3b181b44992a7dfcaf84cce0d58dfe 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 9.4E-108 T 28-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 DDI_RS11620 4d3b181b44992a7dfcaf84cce0d58dfe 235 Pfam PF00005 ABC transporter 26 174 8.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS11620 4d3b181b44992a7dfcaf84cce0d58dfe 235 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS11620 4d3b181b44992a7dfcaf84cce0d58dfe 235 Gene3D G3DSA:3.40.50.300 2 233 3.7E-62 T 28-03-2018 DDI_RS11620 4d3b181b44992a7dfcaf84cce0d58dfe 235 SMART SM00382 35 223 1.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07250 747885021f1285cb5bbc820836aff83d 298 SUPERFAMILY SSF103481 35 138 1.96E-13 T 28-03-2018 DDI_RS07250 747885021f1285cb5bbc820836aff83d 298 Pfam PF00892 EamA-like transporter family 4 134 3.1E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS07250 747885021f1285cb5bbc820836aff83d 298 Pfam PF00892 EamA-like transporter family 148 285 1.3E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS07250 747885021f1285cb5bbc820836aff83d 298 SUPERFAMILY SSF103481 191 290 2.88E-10 T 28-03-2018 DDI_RS03410 4e66ea3edd0730d668a9dfef5cd7b930 72 Pfam PF07362 Post-segregation antitoxin CcdA 2 72 3.1E-26 T 28-03-2018 IPR009956 Post-segregation antitoxin CcdA DDI_RS20235 abeed168ca01d9900e6f8a1e917c2a99 299 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 63.901 T 28-03-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 DDI_RS20235 abeed168ca01d9900e6f8a1e917c2a99 299 Pfam PF01522 Polysaccharide deacetylase 15 167 3.8E-7 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DDI_RS20235 abeed168ca01d9900e6f8a1e917c2a99 299 Gene3D G3DSA:3.20.20.370 2 274 1.3E-24 T 28-03-2018 DDI_RS20235 abeed168ca01d9900e6f8a1e917c2a99 299 SUPERFAMILY SSF88713 4 38 7.23E-25 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DDI_RS20235 abeed168ca01d9900e6f8a1e917c2a99 299 SUPERFAMILY SSF88713 82 280 7.23E-25 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 3.8E-21 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 SMART SM00344 2 111 1.1E-36 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 SUPERFAMILY SSF46785 2 92 3.91E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 SUPERFAMILY SSF54909 62 151 4.69E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.8E-17 T 28-03-2018 DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 Gene3D G3DSA:3.30.70.920 55 148 4.1E-27 T 28-03-2018 DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 Gene3D G3DSA:1.10.10.10 3 54 1.0E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 5.3E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 5.3E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS04320 b957d1cf2984f0f20c70cdeecb7a3baf 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 5.3E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS01325 d380283c0cea0a37e0107fa4eea48ceb 110 SUPERFAMILY SSF49472 1 110 1.44E-31 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DDI_RS01325 d380283c0cea0a37e0107fa4eea48ceb 110 Pfam PF00576 HIUase/Transthyretin family 4 109 2.3E-28 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DDI_RS01325 d380283c0cea0a37e0107fa4eea48ceb 110 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 110 4.0E-31 T 28-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DDI_RS01325 d380283c0cea0a37e0107fa4eea48ceb 110 PRINTS PR00189 Transthyretin signature 3 23 2.0E-5 T 28-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DDI_RS01325 d380283c0cea0a37e0107fa4eea48ceb 110 PRINTS PR00189 Transthyretin signature 88 110 2.0E-5 T 28-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DDI_RS01325 d380283c0cea0a37e0107fa4eea48ceb 110 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 28-03-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DDI_RS01325 d380283c0cea0a37e0107fa4eea48ceb 110 Gene3D G3DSA:2.60.40.180 1 110 2.0E-32 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 Pfam PF00210 Ferritin-like domain 23 160 4.7E-28 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 ProSitePatterns PS00818 Dps protein family signature 1. 43 59 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 43 59 3.1E-14 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 67 83 3.1E-14 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 138 156 3.1E-14 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 SUPERFAMILY SSF47240 7 160 3.48E-46 T 28-03-2018 IPR009078 Ferritin-like superfamily DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 ProSitePatterns PS00819 Dps protein family signature 2. 69 83 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 Gene3D G3DSA:1.20.1260.10 4 161 6.9E-45 T 28-03-2018 IPR012347 Ferritin-related DDI_RS05495 b3818800cd284e97eb3c79570e540f63 161 PIRSF PIRSF005900 2 161 5.4E-46 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 2.0E-51 T 28-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 SUPERFAMILY SSF48557 10 454 1.23E-103 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 Gene3D G3DSA:1.10.275.10 1 117 3.6E-43 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.9E-17 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.9E-17 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.9E-17 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.9E-17 T 28-03-2018 IPR000362 Fumarate lyase family DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 Gene3D G3DSA:1.20.200.10 118 390 5.9E-81 T 28-03-2018 DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 7.2E-149 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 Pfam PF00206 Lyase 14 312 1.7E-76 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 Gene3D G3DSA:1.10.40.30 391 445 3.6E-32 T 28-03-2018 DDI_RS10075 c686b8334ea23c657a9e6dae6366bec9 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 SUPERFAMILY SSF53067 8 221 2.65E-62 T 28-03-2018 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 Pfam PF14450 Cell division protein FtsA 207 381 2.5E-24 T 28-03-2018 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 SUPERFAMILY SSF53067 198 384 3.89E-47 T 28-03-2018 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.558 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 Gene3D G3DSA:3.90.640.10 248 300 1.0E-19 T 28-03-2018 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 3.1E-162 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 Gene3D G3DSA:3.30.420.40 2 186 7.8E-35 T 28-03-2018 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 PIRSF PIRSF003101 1 418 5.7E-155 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 SMART SM00842 10 196 5.6E-97 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 Gene3D G3DSA:3.30.420.40 197 247 4.4E-6 T 28-03-2018 DDI_RS16710 22176eff29b749517909973c9f7e4e12 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 9.2E-30 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 SUPERFAMILY SSF82866 806 1032 1.7E-44 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 SUPERFAMILY SSF82866 296 497 8.63E-49 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 Gene3D G3DSA:3.30.2090.10 180 273 3.7E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 Gene3D G3DSA:3.30.70.1440 671 768 8.8E-19 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 3.7E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 SUPERFAMILY SSF82693 38 133 3.4E-26 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 SUPERFAMILY SSF82693 564 668 8.37E-31 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 Gene3D G3DSA:3.30.70.1430 38 140 6.6E-28 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 SUPERFAMILY SSF82714 182 271 5.62E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 SUPERFAMILY SSF82693 135 182 4.19E-27 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 SUPERFAMILY SSF82693 274 330 4.19E-27 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 Gene3D G3DSA:1.20.1640.10 274 500 4.4E-45 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 Gene3D G3DSA:1.20.1640.10 824 1030 7.3E-37 T 28-03-2018 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 SUPERFAMILY SSF82714 722 809 4.84E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1046 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 DDI_RS04385 211272fc5044423a9462041bd31982f3 1049 Gene3D G3DSA:3.30.70.1430 566 667 1.8E-19 T 28-03-2018 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 Gene3D G3DSA:3.40.50.300 96 291 1.4E-43 T 28-03-2018 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 Pfam PF12848 ABC transporter 224 298 4.2E-9 T 28-03-2018 IPR032781 ABC-transporter extension domain DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 Pfam PF16326 ABC transporter C-terminal domain 571 639 3.1E-23 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 Gene3D G3DSA:3.40.50.300 292 550 1.8E-57 T 28-03-2018 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 Gene3D G3DSA:1.20.58.410 572 642 3.4E-6 T 28-03-2018 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 Gene3D G3DSA:3.40.50.300 7 95 4.2E-9 T 28-03-2018 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 SMART SM00382 344 514 5.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 SMART SM00382 28 230 4.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 Pfam PF00005 ABC transporter 338 469 1.4E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 Pfam PF00005 ABC transporter 19 185 2.1E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 SUPERFAMILY SSF52540 126 239 3.42E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 SUPERFAMILY SSF52540 3 94 3.42E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 SUPERFAMILY SSF52540 311 516 1.41E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11470 6560a6daf25f9a1c57142718cc7d5a23 644 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07355 85e6951f9adec6bd48f589b6fb80c01c 170 Pfam PF12680 SnoaL-like domain 9 114 4.7E-14 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain DDI_RS07355 85e6951f9adec6bd48f589b6fb80c01c 170 SUPERFAMILY SSF54427 1 117 2.85E-31 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS07355 85e6951f9adec6bd48f589b6fb80c01c 170 Gene3D G3DSA:3.10.450.50 1 119 6.3E-18 T 28-03-2018 DDI_RS15510 95433d0cfe32d714f85059081c4dde87 265 SUPERFAMILY SSF101386 138 239 3.74E-22 T 28-03-2018 DDI_RS15510 95433d0cfe32d714f85059081c4dde87 265 SUPERFAMILY SSF101386 6 105 9.6E-26 T 28-03-2018 DDI_RS15510 95433d0cfe32d714f85059081c4dde87 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 29 102 3.8E-28 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DDI_RS15510 95433d0cfe32d714f85059081c4dde87 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 231 3.8E-6 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DDI_RS15510 95433d0cfe32d714f85059081c4dde87 265 Gene3D G3DSA:1.10.287.1080 139 265 2.6E-26 T 28-03-2018 DDI_RS15510 95433d0cfe32d714f85059081c4dde87 265 Gene3D G3DSA:1.10.287.1080 5 124 1.3E-43 T 28-03-2018 DDI_RS15510 95433d0cfe32d714f85059081c4dde87 265 TIGRFAM TIGR00444 mazG: MazG family protein 12 259 5.1E-111 T 28-03-2018 IPR011551 NTP pyrophosphohydrolase MazG DDI_RS19165 f7323c6d8464f3e5bd3f8dcbef3ee5bc 294 Pfam PF00795 Carbon-nitrogen hydrolase 5 268 8.0E-54 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS19165 f7323c6d8464f3e5bd3f8dcbef3ee5bc 294 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 284 1.2E-143 T 28-03-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 DDI_RS19165 f7323c6d8464f3e5bd3f8dcbef3ee5bc 294 Gene3D G3DSA:3.60.110.10 3 284 9.8E-76 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS19165 f7323c6d8464f3e5bd3f8dcbef3ee5bc 294 SUPERFAMILY SSF56317 1 284 4.19E-81 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 DDI_RS08330 c7671d8d83bfeb73992873131b04bff6 112 Pfam PF04363 Protein of unknown function (DUF496) 10 102 1.9E-46 T 28-03-2018 IPR007458 Protein of unknown function DUF496 DDI_RS08330 c7671d8d83bfeb73992873131b04bff6 112 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 10 104 25.967 T 28-03-2018 IPR007458 Protein of unknown function DUF496 DDI_RS08330 c7671d8d83bfeb73992873131b04bff6 112 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 13 100 1.0E-39 T 28-03-2018 IPR007458 Protein of unknown function DUF496 DDI_RS08330 c7671d8d83bfeb73992873131b04bff6 112 PIRSF PIRSF028773 1 111 1.4E-51 T 28-03-2018 IPR007458 Protein of unknown function DUF496 DDI_RS08405 2bd2d3db7cb26c8013711341c51bc6ca 436 Gene3D G3DSA:3.30.9.10 110 353 1.7E-19 T 28-03-2018 DDI_RS08405 2bd2d3db7cb26c8013711341c51bc6ca 436 Pfam PF01266 FAD dependent oxidoreductase 35 391 1.4E-36 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDI_RS08405 2bd2d3db7cb26c8013711341c51bc6ca 436 Gene3D G3DSA:3.40.50.720 21 109 0.0011 T 28-03-2018 DDI_RS08405 2bd2d3db7cb26c8013711341c51bc6ca 436 SUPERFAMILY SSF51905 35 254 5.61E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS08405 2bd2d3db7cb26c8013711341c51bc6ca 436 SUPERFAMILY SSF51905 364 400 5.61E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS08405 2bd2d3db7cb26c8013711341c51bc6ca 436 SUPERFAMILY SSF51905 296 307 5.61E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS15090 0a059d42afbde7806e91de202885358a 152 SUPERFAMILY SSF53271 4 143 1.44E-30 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS15090 0a059d42afbde7806e91de202885358a 152 Pfam PF00156 Phosphoribosyl transferase domain 11 144 9.0E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDI_RS15090 0a059d42afbde7806e91de202885358a 152 Gene3D G3DSA:3.40.50.2020 1 151 9.9E-26 T 28-03-2018 DDI_RS15090 0a059d42afbde7806e91de202885358a 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.533 T 28-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 DDI_RS16160 893d337e4f829b20ba4df1f8c1936379 438 Pfam PF17289 Terminase RNaseH-like domain 259 413 3.2E-21 T 28-03-2018 IPR035421 Terminase, large subunit gp17-like DDI_RS16160 893d337e4f829b20ba4df1f8c1936379 438 Pfam PF03237 Terminase-like family 24 236 3.9E-19 T 28-03-2018 DDI_RS09090 298f0fdc90b676b8dde0449d5980eaac 250 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 249 21.804 T 28-03-2018 IPR009627 Uncharacterised protein family UPF0259 DDI_RS09090 298f0fdc90b676b8dde0449d5980eaac 250 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 6.3E-81 T 28-03-2018 IPR009627 Uncharacterised protein family UPF0259 DDI_RS21160 7924bff513b867375e37bfeeaab5e36f 334 Pfam PF04748 Divergent polysaccharide deacetylase 52 262 2.6E-75 T 28-03-2018 IPR006837 Divergent polysaccharide deacetylase DDI_RS21160 7924bff513b867375e37bfeeaab5e36f 334 Gene3D G3DSA:3.20.20.370 42 265 5.8E-80 T 28-03-2018 DDI_RS21160 7924bff513b867375e37bfeeaab5e36f 334 SUPERFAMILY SSF88713 48 262 1.09E-70 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 PRINTS PR00095 Anthranilate synthase component I signature 384 398 9.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 PRINTS PR00095 Anthranilate synthase component I signature 304 317 9.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 PRINTS PR00095 Anthranilate synthase component I signature 399 413 9.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 PRINTS PR00095 Anthranilate synthase component I signature 290 303 9.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 SUPERFAMILY SSF56322 4 450 3.27E-146 T 28-03-2018 IPR005801 ADC synthase GO:0009058 DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 106 443 2.8E-129 T 28-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 Pfam PF00425 chorismate binding enzyme 188 442 4.4E-92 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 Gene3D G3DSA:3.60.120.10 2 452 1.4E-153 T 28-03-2018 IPR005801 ADC synthase GO:0009058 DDI_RS09835 14e9573cacd29220ba15a7ef16e1d633 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 153 2.0E-28 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS02930 820502567b696b46f54c3482c836350b 553 Gene3D G3DSA:3.40.50.300 1 232 2.7E-26 T 28-03-2018 DDI_RS02930 820502567b696b46f54c3482c836350b 553 Gene3D G3DSA:3.40.50.300 233 531 4.7E-16 T 28-03-2018 DDI_RS02930 820502567b696b46f54c3482c836350b 553 SUPERFAMILY SSF52540 284 507 1.55E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02930 820502567b696b46f54c3482c836350b 553 SUPERFAMILY SSF52540 4 50 1.55E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02930 820502567b696b46f54c3482c836350b 553 PIRSF PIRSF003128 1 553 1.0E-158 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DDI_RS02930 820502567b696b46f54c3482c836350b 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.8E-168 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DDI_RS02930 820502567b696b46f54c3482c836350b 553 SUPERFAMILY SSF52540 1 217 7.09E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02930 820502567b696b46f54c3482c836350b 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 508 8.9E-18 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal DDI_RS17370 8178af88282d5f7f530f940986f8ac41 253 SUPERFAMILY SSF161098 24 214 1.44E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17370 8178af88282d5f7f530f940986f8ac41 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 225 1.0E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17370 8178af88282d5f7f530f940986f8ac41 253 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 119 1.7E-25 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS17370 8178af88282d5f7f530f940986f8ac41 253 Gene3D G3DSA:1.10.3720.10 3 231 2.6E-37 T 28-03-2018 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 Gene3D G3DSA:2.40.50.140 375 436 5.7E-23 T 28-03-2018 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 Gene3D G3DSA:3.80.30.20 132 374 2.3E-47 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 SMART SM00729 135 360 1.3E-52 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 139 159 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 433 7.4E-111 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 SUPERFAMILY SSF102114 118 366 1.57E-53 T 28-03-2018 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 433 5.2E-195 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 Pfam PF04055 Radical SAM superfamily 141 318 6.3E-30 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 Pfam PF00919 Uncharacterized protein family UPF0004 4 88 1.8E-21 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DDI_RS07890 4acb87740c5e69c8aefa187b3954f4ce 436 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 435 63.445 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 DDI_RS15060 83b003da48026adea29239886acdec4f 417 SUPERFAMILY SSF53720 2 412 2.75E-114 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS15060 83b003da48026adea29239886acdec4f 417 Pfam PF00171 Aldehyde dehydrogenase family 4 282 1.4E-16 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS15060 83b003da48026adea29239886acdec4f 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 28-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDI_RS15060 83b003da48026adea29239886acdec4f 417 PIRSF PIRSF000151 1 417 4.8E-172 T 28-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DDI_RS15060 83b003da48026adea29239886acdec4f 417 Gene3D G3DSA:3.40.605.10 238 417 9.6E-33 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS15060 83b003da48026adea29239886acdec4f 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.058 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDI_RS15060 83b003da48026adea29239886acdec4f 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 2.6E-184 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDI_RS15060 83b003da48026adea29239886acdec4f 417 Gene3D G3DSA:3.40.605.10 1 237 5.2E-44 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS07500 9c3622fc390374ae78975759cb57d236 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 323 5.5E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS07500 9c3622fc390374ae78975759cb57d236 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 304 2.6E-14 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS07500 9c3622fc390374ae78975759cb57d236 326 SUPERFAMILY SSF52540 14 262 5.08E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07500 9c3622fc390374ae78975759cb57d236 326 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07500 9c3622fc390374ae78975759cb57d236 326 Pfam PF00005 ABC transporter 40 190 1.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07500 9c3622fc390374ae78975759cb57d236 326 SMART SM00382 49 240 2.4E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07500 9c3622fc390374ae78975759cb57d236 326 Gene3D G3DSA:3.40.50.300 11 326 1.1E-82 T 28-03-2018 DDI_RS17140 114c595e091ff273204ff4179354741e 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 2.4E-36 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 DDI_RS17140 114c595e091ff273204ff4179354741e 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.4E-51 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DDI_RS17140 114c595e091ff273204ff4179354741e 410 SUPERFAMILY SSF52283 7 137 9.99E-50 T 28-03-2018 DDI_RS17140 114c595e091ff273204ff4179354741e 410 Gene3D G3DSA:3.40.50.720 136 295 2.2E-41 T 28-03-2018 DDI_RS17140 114c595e091ff273204ff4179354741e 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDI_RS17140 114c595e091ff273204ff4179354741e 410 Gene3D G3DSA:3.40.50.720 1 135 8.6E-42 T 28-03-2018 DDI_RS17140 114c595e091ff273204ff4179354741e 410 SUPERFAMILY SSF51735 108 295 1.97E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17140 114c595e091ff273204ff4179354741e 410 SUPERFAMILY SSF55021 339 409 3.12E-15 T 28-03-2018 DDI_RS17140 114c595e091ff273204ff4179354741e 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDI_RS17140 114c595e091ff273204ff4179354741e 410 Gene3D G3DSA:3.30.70.260 328 409 9.9E-13 T 28-03-2018 DDI_RS17140 114c595e091ff273204ff4179354741e 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DDI_RS07410 66d219683a4915850bba2d10db2d413d 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 8 21 5.3E-7 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDI_RS07410 66d219683a4915850bba2d10db2d413d 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 40 53 5.3E-7 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDI_RS07410 66d219683a4915850bba2d10db2d413d 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 25 39 5.3E-7 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDI_RS07410 66d219683a4915850bba2d10db2d413d 82 SUPERFAMILY SSF51230 4 78 2.75E-15 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS07410 66d219683a4915850bba2d10db2d413d 82 Pfam PF00364 Biotin-requiring enzyme 5 78 4.4E-10 T 28-03-2018 IPR000089 Biotin/lipoyl attachment DDI_RS07410 66d219683a4915850bba2d10db2d413d 82 Gene3D G3DSA:2.40.50.100 2 80 2.2E-8 T 28-03-2018 DDI_RS02720 fb1b47753c6446916a881749cfcd0f74 522 Gene3D G3DSA:2.115.10.20 13 308 2.3E-59 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain DDI_RS02720 fb1b47753c6446916a881749cfcd0f74 522 Gene3D G3DSA:2.60.120.200 318 520 2.9E-40 T 28-03-2018 DDI_RS02720 fb1b47753c6446916a881749cfcd0f74 522 SUPERFAMILY SSF75005 19 295 2.86E-77 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain DDI_RS02720 fb1b47753c6446916a881749cfcd0f74 522 SUPERFAMILY SSF49899 321 521 1.38E-27 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain DDI_RS02720 fb1b47753c6446916a881749cfcd0f74 522 Pfam PF04616 Glycosyl hydrolases family 43 19 288 5.2E-67 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DDI_RS21265 1d50f39d2ada406dbc9c41c9bfae42c2 545 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 4.6E-181 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 DDI_RS21265 1d50f39d2ada406dbc9c41c9bfae42c2 545 SUPERFAMILY SSF56112 94 158 2.19E-48 T 28-03-2018 IPR011009 Protein kinase-like domain DDI_RS21265 1d50f39d2ada406dbc9c41c9bfae42c2 545 SUPERFAMILY SSF56112 193 436 2.19E-48 T 28-03-2018 IPR011009 Protein kinase-like domain DDI_RS21265 1d50f39d2ada406dbc9c41c9bfae42c2 545 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 541 57.188 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 DDI_RS21265 1d50f39d2ada406dbc9c41c9bfae42c2 545 Gene3D G3DSA:3.30.200.20 103 244 5.0E-20 T 28-03-2018 DDI_RS21265 1d50f39d2ada406dbc9c41c9bfae42c2 545 Pfam PF03109 ABC1 family 113 231 8.3E-34 T 28-03-2018 IPR004147 UbiB domain DDI_RS17335 7e9e7011ddfdd31d4c990684235d22e1 243 Pfam PF00005 ABC transporter 49 180 1.2E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS17335 7e9e7011ddfdd31d4c990684235d22e1 243 Gene3D G3DSA:3.40.50.300 1 236 3.9E-41 T 28-03-2018 DDI_RS17335 7e9e7011ddfdd31d4c990684235d22e1 243 SUPERFAMILY SSF52540 42 233 1.11E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17335 7e9e7011ddfdd31d4c990684235d22e1 243 SMART SM00382 58 229 8.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 1.7E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 SMART SM00387 233 349 2.5E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 Pfam PF00989 PAS fold 11 99 9.0E-7 T 28-03-2018 IPR013767 PAS fold GO:0006355 DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 Gene3D G3DSA:1.10.287.130 118 187 3.8E-14 T 28-03-2018 DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 SUPERFAMILY SSF55785 11 100 7.85E-6 T 28-03-2018 IPR000014 PAS domain DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 Gene3D G3DSA:3.30.450.20 9 103 4.3E-10 T 28-03-2018 DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 SUPERFAMILY SSF47384 125 186 1.1E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.6E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 Gene3D G3DSA:3.30.565.10 194 349 4.1E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 SUPERFAMILY SSF55874 198 346 3.01E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 SMART SM00091 7 75 1.9E-6 T 28-03-2018 IPR000014 PAS domain DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 SMART SM00388 129 194 1.8E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 4.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 4.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19815 0b064a82c24f7b28abcc1c23d7f88360 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 4.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 12 478 2.6E-256 T 28-03-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 SUPERFAMILY SSF53807 8 478 4.85E-162 T 28-03-2018 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 Gene3D G3DSA:3.40.50.1980 207 310 1.0E-28 T 28-03-2018 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 Gene3D G3DSA:3.40.50.1980 48 206 2.2E-38 T 28-03-2018 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 81 88 - T 28-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 62 466 3.5E-108 T 28-03-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 152 166 - T 28-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 27 472 2.2E-187 T 28-03-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 Gene3D G3DSA:3.40.50.1980 311 387 3.3E-24 T 28-03-2018 DDI_RS17615 a043ed17be9f4b3f0facfe20fa19a0c9 482 Gene3D G3DSA:3.40.50.1980 388 478 3.6E-29 T 28-03-2018 DDI_RS15120 473b2af0fabd69175d1206e756b16d7d 193 SUPERFAMILY SSF53697 1 189 7.48E-50 T 28-03-2018 DDI_RS15120 473b2af0fabd69175d1206e756b16d7d 193 Pfam PF13580 SIS domain 25 146 3.5E-28 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS15120 473b2af0fabd69175d1206e756b16d7d 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.363 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DDI_RS15120 473b2af0fabd69175d1206e756b16d7d 193 Gene3D G3DSA:3.40.50.10490 1 193 1.4E-39 T 28-03-2018 DDI_RS15120 473b2af0fabd69175d1206e756b16d7d 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 5.9E-80 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DDI_RS11985 772c93f9aa2eba95701ce0d1ac31b259 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 104 3.5E-29 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DDI_RS11985 772c93f9aa2eba95701ce0d1ac31b259 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 104 18.353 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DDI_RS11985 772c93f9aa2eba95701ce0d1ac31b259 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 104 6.2E-28 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DDI_RS11985 772c93f9aa2eba95701ce0d1ac31b259 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 9.0E-18 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DDI_RS11985 772c93f9aa2eba95701ce0d1ac31b259 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 9.0E-18 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DDI_RS11985 772c93f9aa2eba95701ce0d1ac31b259 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 9.0E-18 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DDI_RS02635 54b773a0731e51c1d030b8eb6ce0d8c8 301 SUPERFAMILY SSF161098 95 282 3.92E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS02635 54b773a0731e51c1d030b8eb6ce0d8c8 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 34 77 1.9E-8 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS02635 54b773a0731e51c1d030b8eb6ce0d8c8 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 300 9.6E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS02635 54b773a0731e51c1d030b8eb6ce0d8c8 301 Gene3D G3DSA:1.10.3720.10 18 290 3.7E-41 T 28-03-2018 DDI_RS05525 415fb38fd71a589eec958258087daf82 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 328 1.7E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS05525 415fb38fd71a589eec958258087daf82 339 Pfam PF00005 ABC transporter 33 191 7.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS05525 415fb38fd71a589eec958258087daf82 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 307 8.8E-16 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS05525 415fb38fd71a589eec958258087daf82 339 Gene3D G3DSA:3.40.50.300 12 337 9.2E-74 T 28-03-2018 DDI_RS05525 415fb38fd71a589eec958258087daf82 339 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS05525 415fb38fd71a589eec958258087daf82 339 SMART SM00382 41 249 2.1E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05525 415fb38fd71a589eec958258087daf82 339 SUPERFAMILY SSF52540 16 263 1.09E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03930 dfb8fa72af8a4a18b7a7e5765c469412 361 Gene3D G3DSA:3.40.50.720 124 361 2.0E-67 T 28-03-2018 DDI_RS03930 dfb8fa72af8a4a18b7a7e5765c469412 361 Gene3D G3DSA:3.40.250.10 6 123 3.3E-21 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS03930 dfb8fa72af8a4a18b7a7e5765c469412 361 Pfam PF00899 ThiF family 123 358 2.4E-62 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDI_RS03930 dfb8fa72af8a4a18b7a7e5765c469412 361 SUPERFAMILY SSF69572 115 361 2.75E-86 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDI_RS03930 dfb8fa72af8a4a18b7a7e5765c469412 361 SUPERFAMILY SSF52821 11 110 5.24E-25 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS03930 dfb8fa72af8a4a18b7a7e5765c469412 361 Pfam PF00581 Rhodanese-like domain 20 104 1.6E-13 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS03930 dfb8fa72af8a4a18b7a7e5765c469412 361 SMART SM00450 10 108 1.2E-12 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS01750 20e52f0d55cd03ac99afeaa54c7c6640 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDI_RS01750 20e52f0d55cd03ac99afeaa54c7c6640 193 SUPERFAMILY SSF48498 81 189 4.0E-22 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS01750 20e52f0d55cd03ac99afeaa54c7c6640 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 3.0E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS01750 20e52f0d55cd03ac99afeaa54c7c6640 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS01750 20e52f0d55cd03ac99afeaa54c7c6640 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS01750 20e52f0d55cd03ac99afeaa54c7c6640 193 Gene3D G3DSA:1.10.10.60 2 55 7.5E-15 T 28-03-2018 DDI_RS01750 20e52f0d55cd03ac99afeaa54c7c6640 193 SUPERFAMILY SSF46689 2 77 8.72E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS01750 20e52f0d55cd03ac99afeaa54c7c6640 193 Gene3D G3DSA:1.10.357.10 56 190 1.5E-16 T 28-03-2018 DDI_RS00295 978f064b8e83e69ae4265b165582e35e 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 9.3E-126 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DDI_RS00295 978f064b8e83e69ae4265b165582e35e 420 SUPERFAMILY SSF55205 1 417 3.11E-146 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DDI_RS00295 978f064b8e83e69ae4265b165582e35e 420 Gene3D G3DSA:3.65.10.10 21 219 1.8E-51 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DDI_RS00295 978f064b8e83e69ae4265b165582e35e 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.281 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS00295 978f064b8e83e69ae4265b165582e35e 420 Gene3D G3DSA:3.65.10.10 220 418 2.8E-47 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DDI_RS00295 978f064b8e83e69ae4265b165582e35e 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 3.9E-183 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 SUPERFAMILY SSF52540 5 243 1.23E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 Pfam PF08402 TOBE domain 280 358 9.3E-17 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 Gene3D G3DSA:2.40.50.100 244 292 0.27 T 28-03-2018 DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 SUPERFAMILY SSF50331 238 358 4.68E-14 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 354 2.6E-111 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 Gene3D G3DSA:3.40.50.300 1 243 4.5E-73 T 28-03-2018 DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 SMART SM00382 30 212 3.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS10490 87f877de604c6fe5077479ffb771cc95 364 Pfam PF00005 ABC transporter 21 163 1.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS18345 8c37a019b2be87ab57561d2f3dd6f7b9 384 SUPERFAMILY SSF51604 113 380 2.49E-61 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS18345 8c37a019b2be87ab57561d2f3dd6f7b9 384 Pfam PF13378 Enolase C-terminal domain-like 154 372 8.5E-46 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS18345 8c37a019b2be87ab57561d2f3dd6f7b9 384 SUPERFAMILY SSF54826 2 127 5.22E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS18345 8c37a019b2be87ab57561d2f3dd6f7b9 384 Gene3D G3DSA:3.30.390.10 1 131 7.2E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS18345 8c37a019b2be87ab57561d2f3dd6f7b9 384 SMART SM00922 150 253 8.8E-17 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS18345 8c37a019b2be87ab57561d2f3dd6f7b9 384 Gene3D G3DSA:3.20.20.120 132 372 6.3E-48 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS18345 8c37a019b2be87ab57561d2f3dd6f7b9 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 30 125 1.2E-8 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DDI_RS12140 1772ea75332149f92603b28dd4755f17 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 214 7.3E-78 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DDI_RS12140 1772ea75332149f92603b28dd4755f17 214 PIRSF PIRSF002884 6 214 3.3E-87 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DDI_RS12140 1772ea75332149f92603b28dd4755f17 214 Gene3D G3DSA:1.10.287.500 36 168 4.0E-21 T 28-03-2018 DDI_RS12140 1772ea75332149f92603b28dd4755f17 214 SUPERFAMILY SSF75708 14 213 6.15E-65 T 28-03-2018 DDI_RS12140 1772ea75332149f92603b28dd4755f17 214 Gene3D G3DSA:1.20.5.590 5 34 5.4E-14 T 28-03-2018 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 Gene3D G3DSA:3.90.170.10 267 432 1.2E-68 T 28-03-2018 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 1.6E-205 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 SUPERFAMILY SSF52540 3 431 5.2E-181 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 SMART SM00788 4 425 0.0 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 220.697 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 Gene3D G3DSA:3.40.440.10 152 266 6.7E-27 T 28-03-2018 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 Gene3D G3DSA:3.40.440.10 1 151 6.8E-54 T 28-03-2018 DDI_RS17250 3058568124c54f13deeefbc34857c7c6 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 3.3E-181 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDI_RS06650 12591165a4019332b9eb66a0b8a6ee3f 1164 Gene3D G3DSA:3.40.50.300 74 296 5.6E-5 T 28-03-2018 DDI_RS06650 12591165a4019332b9eb66a0b8a6ee3f 1164 Pfam PF06761 Intracellular multiplication and human macrophage-killing 506 819 6.7E-78 T 28-03-2018 IPR009612 ImcF-related DDI_RS06650 12591165a4019332b9eb66a0b8a6ee3f 1164 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 24 1161 0.0 T 28-03-2018 IPR017731 Type VI secretion system, IcmF DDI_RS06650 12591165a4019332b9eb66a0b8a6ee3f 1164 SUPERFAMILY SSF52540 126 275 1.15E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06650 12591165a4019332b9eb66a0b8a6ee3f 1164 Pfam PF06744 Type VI secretion protein IcmF C-terminal 918 1112 1.4E-53 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal DDI_RS06650 12591165a4019332b9eb66a0b8a6ee3f 1164 Pfam PF14331 ImcF-related N-terminal domain 201 455 1.3E-67 T 28-03-2018 IPR025743 ImcF-related, N-terminal domain DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 Gene3D G3DSA:3.40.50.300 3 279 9.1E-53 T 28-03-2018 DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 SUPERFAMILY SSF52540 295 515 5.33E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 Pfam PF12848 ABC transporter 217 298 4.4E-28 T 28-03-2018 IPR032781 ABC-transporter extension domain DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 SUPERFAMILY SSF52540 3 92 1.86E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 SUPERFAMILY SSF52540 119 257 1.86E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 Gene3D G3DSA:3.40.50.300 308 623 1.7E-49 T 28-03-2018 DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 SMART SM00382 337 506 1.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 SMART SM00382 26 223 3.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 Pfam PF00005 ABC transporter 17 178 4.6E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 Pfam PF00005 ABC transporter 328 459 3.9E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS18245 cde92aad42cbbf204096fcc8b9ac39ea 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS05160 3174e8c6ed0a1ba10625b0e3e2c80807 134 PIRSF PIRSF003230 1 134 4.2E-46 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DDI_RS05160 3174e8c6ed0a1ba10625b0e3e2c80807 134 Gene3D G3DSA:3.10.129.10 1 134 4.5E-33 T 28-03-2018 DDI_RS05160 3174e8c6ed0a1ba10625b0e3e2c80807 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 5.0E-40 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DDI_RS05160 3174e8c6ed0a1ba10625b0e3e2c80807 134 SUPERFAMILY SSF54637 3 133 1.05E-36 T 28-03-2018 IPR029069 HotDog domain DDI_RS05160 3174e8c6ed0a1ba10625b0e3e2c80807 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 6.1E-48 T 28-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 DDI_RS05160 3174e8c6ed0a1ba10625b0e3e2c80807 134 Pfam PF03061 Thioesterase superfamily 20 103 9.5E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDI_RS19600 943e40dc9516553691f49e3336981288 144 Pfam PF00582 Universal stress protein family 3 138 1.7E-21 T 28-03-2018 IPR006016 UspA GO:0006950 DDI_RS19600 943e40dc9516553691f49e3336981288 144 SUPERFAMILY SSF52402 3 138 5.78E-32 T 28-03-2018 DDI_RS19600 943e40dc9516553691f49e3336981288 144 PIRSF PIRSF006276 1 141 1.4E-53 T 28-03-2018 IPR006015 Universal stress protein A DDI_RS19600 943e40dc9516553691f49e3336981288 144 Gene3D G3DSA:3.40.50.620 2 142 1.3E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS14170 94fd6c5a4bab33524d1cd8474f5c2718 551 SUPERFAMILY SSF52266 276 534 1.68E-42 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS14170 94fd6c5a4bab33524d1cd8474f5c2718 551 Gene3D G3DSA:3.40.50.1110 276 541 3.4E-23 T 28-03-2018 DDI_RS14170 94fd6c5a4bab33524d1cd8474f5c2718 551 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 283 524 1.7E-11 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS09030 9981cef2674bda427452ca84929fc0b0 306 SUPERFAMILY SSF161098 88 290 2.62E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09030 9981cef2674bda427452ca84929fc0b0 306 Gene3D G3DSA:1.10.3720.10 2 294 3.3E-41 T 28-03-2018 DDI_RS09030 9981cef2674bda427452ca84929fc0b0 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 3.3E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06670 520eea8a19f56840c8d65cc7795c0243 519 Pfam PF02743 Cache domain 86 284 2.7E-17 T 28-03-2018 IPR033479 Double Cache domain 1 DDI_RS06670 520eea8a19f56840c8d65cc7795c0243 519 Gene3D G3DSA:3.30.450.20 69 181 1.6E-12 T 28-03-2018 DDI_RS06670 520eea8a19f56840c8d65cc7795c0243 519 SUPERFAMILY SSF55073 358 517 1.8E-38 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS06670 520eea8a19f56840c8d65cc7795c0243 519 SMART SM00267 342 518 8.9E-45 T 28-03-2018 IPR000160 GGDEF domain DDI_RS06670 520eea8a19f56840c8d65cc7795c0243 519 Gene3D G3DSA:3.30.70.270 346 519 2.6E-42 T 28-03-2018 DDI_RS06670 520eea8a19f56840c8d65cc7795c0243 519 Gene3D G3DSA:3.30.450.20 182 298 6.8E-11 T 28-03-2018 DDI_RS06670 520eea8a19f56840c8d65cc7795c0243 519 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 514 5.8E-39 T 28-03-2018 IPR000160 GGDEF domain DDI_RS06670 520eea8a19f56840c8d65cc7795c0243 519 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 349 515 1.1E-38 T 28-03-2018 IPR000160 GGDEF domain DDI_RS15025 daccfa0532dbf0d1106b58188b4054e0 238 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 6 233 1.0E-54 T 28-03-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 DDI_RS15025 daccfa0532dbf0d1106b58188b4054e0 238 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 8 232 1.4E-37 T 28-03-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 DDI_RS15025 daccfa0532dbf0d1106b58188b4054e0 238 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 9 48 9.6E-13 T 28-03-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal DDI_RS04025 6abef8a8cfd9a9f05a1974d65920f41a 399 Gene3D G3DSA:3.40.50.1820 53 329 2.9E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS04025 6abef8a8cfd9a9f05a1974d65920f41a 399 Pfam PF12146 Serine aminopeptidase, S33 84 218 4.2E-18 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 DDI_RS04025 6abef8a8cfd9a9f05a1974d65920f41a 399 SUPERFAMILY SSF53474 81 290 5.54E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS10260 bfa7badd3d7e03f7fb376204bb3fe687 144 SUPERFAMILY SSF69635 17 130 1.26E-8 T 28-03-2018 DDI_RS10260 bfa7badd3d7e03f7fb376204bb3fe687 144 Gene3D G3DSA:3.30.1460.10 7 128 1.6E-11 T 28-03-2018 DDI_RS10260 bfa7badd3d7e03f7fb376204bb3fe687 144 Pfam PF05932 Tir chaperone protein (CesT) family 18 114 1.2E-4 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 DDI_RS05300 7555fea15cc11c07fad156ef54333995 416 Gene3D G3DSA:2.130.10.10 29 415 8.0E-6 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS05300 7555fea15cc11c07fad156ef54333995 416 Pfam PF08309 LVIVD repeat 32 60 1.3 T 28-03-2018 IPR013211 LVIVD DDI_RS05300 7555fea15cc11c07fad156ef54333995 416 Pfam PF08309 LVIVD repeat 220 248 0.013 T 28-03-2018 IPR013211 LVIVD DDI_RS05300 7555fea15cc11c07fad156ef54333995 416 SUPERFAMILY SSF51004 16 92 2.07E-7 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain DDI_RS05300 7555fea15cc11c07fad156ef54333995 416 SUPERFAMILY SSF51004 136 315 2.07E-7 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 SUPERFAMILY SSF46689 285 333 1.43E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 354 369 5.0E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 369 385 5.0E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 Gene3D G3DSA:1.10.10.60 342 393 9.3E-12 T 28-03-2018 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 Gene3D G3DSA:1.10.10.60 282 341 2.5E-8 T 28-03-2018 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 Gene3D G3DSA:3.40.50.2300 1 108 7.4E-8 T 28-03-2018 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 SUPERFAMILY SSF53822 10 300 4.24E-45 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 SUPERFAMILY SSF46689 339 389 2.01E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 339 381 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 Pfam PF13377 Periplasmic binding protein-like domain 113 278 1.7E-34 T 28-03-2018 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 Pfam PF12833 Helix-turn-helix domain 310 387 1.4E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 Gene3D G3DSA:3.40.50.2300 109 281 5.5E-28 T 28-03-2018 DDI_RS20660 f2195fc3643432bf24e2706cde987efc 407 SMART SM00342 302 385 1.1E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 SMART SM00382 371 555 1.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 SUPERFAMILY SSF90123 11 328 2.49E-35 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 Pfam PF00005 ABC transporter 362 508 1.1E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 Pfam PF00664 ABC transporter transmembrane region 101 293 6.7E-7 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 Gene3D G3DSA:3.40.50.300 332 582 6.0E-69 T 28-03-2018 DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 SUPERFAMILY SSF52540 342 578 1.23E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 12 539 6.6E-154 T 28-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 DDI_RS08085 97d5350dad325a4833535face32dfb7e 584 Gene3D G3DSA:1.20.1560.10 2 329 2.7E-24 T 28-03-2018 DDI_RS12920 f17371e750808ea790992675780527c4 472 PIRSF PIRSF036492 2 471 2.4E-152 T 28-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 DDI_RS12920 f17371e750808ea790992675780527c4 472 SUPERFAMILY SSF53720 6 445 1.11E-117 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS12920 f17371e750808ea790992675780527c4 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 214 221 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 DDI_RS12920 f17371e750808ea790992675780527c4 472 Gene3D G3DSA:3.40.309.10 234 422 1.1E-56 T 28-03-2018 DDI_RS12920 f17371e750808ea790992675780527c4 472 Gene3D G3DSA:3.40.605.10 3 233 3.2E-65 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS12920 f17371e750808ea790992675780527c4 472 Pfam PF00171 Aldehyde dehydrogenase family 5 440 1.1E-93 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS14470 86bd8c41068603c9dbeeef804e30b0af 233 Gene3D G3DSA:3.40.50.1580 1 231 2.7E-54 T 28-03-2018 DDI_RS14470 86bd8c41068603c9dbeeef804e30b0af 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 7.8E-113 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14470 86bd8c41068603c9dbeeef804e30b0af 233 SUPERFAMILY SSF53167 1 229 1.83E-72 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDI_RS14470 86bd8c41068603c9dbeeef804e30b0af 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.561 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDI_RS14470 86bd8c41068603c9dbeeef804e30b0af 233 Pfam PF01048 Phosphorylase superfamily 2 226 2.8E-49 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDI_RS11350 9870a309b813e760ce399cb9e824685f 510 Pfam PF02264 LamB porin 99 510 4.3E-76 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS11350 9870a309b813e760ce399cb9e824685f 510 SUPERFAMILY SSF56935 97 510 5.55E-86 T 28-03-2018 DDI_RS11350 9870a309b813e760ce399cb9e824685f 510 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 104 505 3.0E-150 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS11350 9870a309b813e760ce399cb9e824685f 510 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 55 1.3E-20 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain DDI_RS11350 9870a309b813e760ce399cb9e824685f 510 Gene3D G3DSA:2.40.170.10 97 510 2.0E-88 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS11230 d3d4da97422747afc4a8659eda9e8cc4 328 Gene3D G3DSA:3.90.1720.10 194 328 1.2E-34 T 28-03-2018 DDI_RS11230 d3d4da97422747afc4a8659eda9e8cc4 328 Pfam PF00877 NlpC/P60 family 210 320 1.6E-29 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain DDI_RS11230 d3d4da97422747afc4a8659eda9e8cc4 328 SUPERFAMILY SSF54001 201 322 1.23E-38 T 28-03-2018 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 Gene3D G3DSA:2.60.260.20 113 171 3.5E-15 T 28-03-2018 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 Pfam PF00226 DnaJ domain 5 67 2.3E-28 T 28-03-2018 IPR001623 DnaJ domain DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 28-03-2018 IPR018253 DnaJ domain, conserved site DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 SUPERFAMILY SSF49493 114 168 1.7E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 SUPERFAMILY SSF49493 212 266 1.7E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-34 T 28-03-2018 IPR001623 DnaJ domain DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-34 T 28-03-2018 IPR001623 DnaJ domain DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-34 T 28-03-2018 IPR001623 DnaJ domain DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-34 T 28-03-2018 IPR001623 DnaJ domain DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 SUPERFAMILY SSF57938 133 210 3.53E-24 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 SUPERFAMILY SSF46565 1 108 4.84E-36 T 28-03-2018 IPR001623 DnaJ domain DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 42.846 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 Pfam PF00684 DnaJ central domain 146 206 4.4E-16 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 Gene3D G3DSA:2.60.260.20 254 364 9.2E-28 T 28-03-2018 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 SMART SM00271 4 62 8.0E-31 T 28-03-2018 IPR001623 DnaJ domain DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 Pfam PF01556 DnaJ C terminal domain 120 332 1.8E-44 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 Gene3D G3DSA:2.60.260.20 172 253 2.2E-18 T 28-03-2018 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 SUPERFAMILY SSF49493 258 343 1.14E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 9.7E-144 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DDI_RS17040 1cfb0003182065200609319e5aa8d221 378 Gene3D G3DSA:1.10.287.110 1 112 5.3E-39 T 28-03-2018 IPR001623 DnaJ domain DDI_RS05815 56314af7d96affd19c34f7bb84d3023f 269 Gene3D G3DSA:3.40.30.10 17 95 1.3E-7 T 28-03-2018 DDI_RS05815 56314af7d96affd19c34f7bb84d3023f 269 SUPERFAMILY SSF52833 39 101 1.84E-8 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS05815 56314af7d96affd19c34f7bb84d3023f 269 Pfam PF17172 Glutathione S-transferase N-terminal domain 43 137 1.4E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS05815 56314af7d96affd19c34f7bb84d3023f 269 Gene3D G3DSA:1.20.1050.10 96 256 5.4E-11 T 28-03-2018 DDI_RS05815 56314af7d96affd19c34f7bb84d3023f 269 Pfam PF17171 Glutathione S-transferase, C-terminal domain 190 253 6.4E-11 T 28-03-2018 IPR033468 Metaxin, glutathione S-transferase domain DDI_RS17800 7f112480f640c1ebb5a38a1c2bb12e90 345 SUPERFAMILY SSF102114 102 320 8.76E-29 T 28-03-2018 DDI_RS17800 7f112480f640c1ebb5a38a1c2bb12e90 345 Pfam PF13394 4Fe-4S single cluster domain 117 195 4.2E-6 T 28-03-2018 DDI_RS17800 7f112480f640c1ebb5a38a1c2bb12e90 345 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 2.0E-135 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DDI_RS17800 7f112480f640c1ebb5a38a1c2bb12e90 345 PIRSF PIRSF004911 1 345 3.3E-118 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DDI_RS17800 7f112480f640c1ebb5a38a1c2bb12e90 345 Gene3D G3DSA:3.20.20.70 101 330 4.7E-21 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS17800 7f112480f640c1ebb5a38a1c2bb12e90 345 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 334 1.4E-158 T 28-03-2018 IPR022462 Lysine-2,3-aminomutase-like DDI_RS17800 7f112480f640c1ebb5a38a1c2bb12e90 345 Pfam PF04055 Radical SAM superfamily 118 263 7.0E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS01680 bc569c4291980be06fa2ceed7d61753c 182 Pfam PF10688 Bacterial inner membrane protein 6 163 3.0E-53 T 28-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV DDI_RS01680 bc569c4291980be06fa2ceed7d61753c 182 PIRSF PIRSF011443 1 180 3.9E-57 T 28-03-2018 IPR026267 Inner membrane protein YgjV DDI_RS13430 68973229b312d9772b981df6d057bf2a 266 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 5 261 5.2E-105 T 28-03-2018 IPR010247 N-formylglutamate deformylase DDI_RS13430 68973229b312d9772b981df6d057bf2a 266 Gene3D G3DSA:3.40.630.40 1 264 1.8E-73 T 28-03-2018 DDI_RS13430 68973229b312d9772b981df6d057bf2a 266 Pfam PF05013 N-formylglutamate amidohydrolase 11 229 8.9E-62 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase DDI_RS13430 68973229b312d9772b981df6d057bf2a 266 SUPERFAMILY SSF53187 3 260 1.23E-75 T 28-03-2018 DDI_RS13000 bafdb23ded455cce11cc61c9f3de14af 253 Pfam PF04333 MlaA lipoprotein 30 223 2.3E-65 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 DDI_RS13000 bafdb23ded455cce11cc61c9f3de14af 253 PRINTS PR01805 VacJ lipoprotein signature 31 44 5.5E-32 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 DDI_RS13000 bafdb23ded455cce11cc61c9f3de14af 253 PRINTS PR01805 VacJ lipoprotein signature 100 117 5.5E-32 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 DDI_RS13000 bafdb23ded455cce11cc61c9f3de14af 253 PRINTS PR01805 VacJ lipoprotein signature 139 156 5.5E-32 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 DDI_RS13000 bafdb23ded455cce11cc61c9f3de14af 253 PRINTS PR01805 VacJ lipoprotein signature 49 65 5.5E-32 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 DDI_RS01590 6a71c7684852c3291396b36728708b0e 169 Pfam PF01475 Ferric uptake regulator family 20 138 2.1E-15 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DDI_RS01590 6a71c7684852c3291396b36728708b0e 169 SUPERFAMILY SSF46785 13 144 5.19E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01590 6a71c7684852c3291396b36728708b0e 169 Gene3D G3DSA:1.10.10.10 1 92 4.0E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17710 bc1c64762fa4eb62244530b2a08f6a1d 513 ProSitePatterns PS00523 Sulfatases signature 1. 52 64 - T 28-03-2018 IPR024607 Sulfatase, conserved site DDI_RS17710 bc1c64762fa4eb62244530b2a08f6a1d 513 Gene3D G3DSA:3.30.1120.10 379 476 4.3E-14 T 28-03-2018 DDI_RS17710 bc1c64762fa4eb62244530b2a08f6a1d 513 SUPERFAMILY SSF53649 5 445 4.19E-117 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS17710 bc1c64762fa4eb62244530b2a08f6a1d 513 Gene3D G3DSA:3.40.720.10 6 372 9.0E-81 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 DDI_RS17710 bc1c64762fa4eb62244530b2a08f6a1d 513 Pfam PF12411 Choline sulfatase enzyme C terminal 451 503 1.9E-17 T 28-03-2018 IPR025863 Choline sulfatase enzyme C-terminal domain DDI_RS17710 bc1c64762fa4eb62244530b2a08f6a1d 513 Pfam PF00884 Sulfatase 6 346 6.7E-61 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 DDI_RS17710 bc1c64762fa4eb62244530b2a08f6a1d 513 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 5 504 7.3E-217 T 28-03-2018 IPR017785 Choline-sulfatase DDI_RS17710 bc1c64762fa4eb62244530b2a08f6a1d 513 ProSitePatterns PS00149 Sulfatases signature 2. 94 104 - T 28-03-2018 IPR024607 Sulfatase, conserved site DDI_RS15225 2dc6c5d7b1cb2a064b3d2ef322a19e87 245 Gene3D G3DSA:3.40.50.1860 6 107 4.3E-4 T 28-03-2018 DDI_RS15225 2dc6c5d7b1cb2a064b3d2ef322a19e87 245 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 211 7.3E-10 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS15225 2dc6c5d7b1cb2a064b3d2ef322a19e87 245 Gene3D G3DSA:3.40.50.1860 108 205 2.5E-13 T 28-03-2018 DDI_RS18940 f57fb32ea68bb35ac7711717853804d9 85 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 70 0.002 T 28-03-2018 DDI_RS18940 f57fb32ea68bb35ac7711717853804d9 85 Gene3D G3DSA:3.30.70.260 1 77 1.0E-7 T 28-03-2018 DDI_RS18940 f57fb32ea68bb35ac7711717853804d9 85 SUPERFAMILY SSF55021 4 75 7.91E-12 T 28-03-2018 DDI_RS18940 f57fb32ea68bb35ac7711717853804d9 85 Pfam PF13710 ACT domain 13 73 2.3E-27 T 28-03-2018 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 Gene3D G3DSA:2.40.160.20 9 214 1.9E-41 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 PRINTS PR01022 Outer membrane protein A signature 248 267 3.0E-48 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 PRINTS PR01022 Outer membrane protein A signature 219 234 3.0E-48 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 PRINTS PR01022 Outer membrane protein A signature 109 125 3.0E-48 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 PRINTS PR01022 Outer membrane protein A signature 287 306 3.0E-48 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 PRINTS PR01022 Outer membrane protein A signature 321 334 3.0E-48 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 PRINTS PR01021 OMPA domain signature 231 253 4.4E-22 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 PRINTS PR01021 OMPA domain signature 278 294 4.4E-22 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 PRINTS PR01021 OMPA domain signature 263 278 4.4E-22 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 Gene3D G3DSA:3.30.1330.60 215 353 1.9E-36 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 SUPERFAMILY SSF56925 22 197 1.52E-41 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 Pfam PF00691 OmpA family 230 318 2.4E-21 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 SUPERFAMILY SSF103088 217 342 9.42E-33 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS13615 aebe947e7771ddfc966ed08c529d2c9e 354 Pfam PF01389 OmpA-like transmembrane domain 23 196 1.7E-66 T 28-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 DDI_RS02540 1a9511f4e2c8baceed3cd33ea1f3a3dc 183 Pfam PF02397 Bacterial sugar transferase 4 174 2.8E-50 T 28-03-2018 IPR003362 Bacterial sugar transferase DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 Gene3D G3DSA:3.20.20.150 1 284 2.3E-61 T 28-03-2018 DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 Pfam PF01261 Xylose isomerase-like TIM barrel 19 239 1.8E-39 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 SMART SM00518 3 279 2.8E-120 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 SUPERFAMILY SSF51658 1 278 1.24E-99 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.073 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DDI_RS07755 9187b3a34c559aae56707e2579c32ecf 291 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 2.4E-105 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DDI_RS03680 62d52c1ca917f538560011cd04be7aa4 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 2.1E-58 T 28-03-2018 IPR021826 Domain of unknown function DUF3412 DDI_RS03680 62d52c1ca917f538560011cd04be7aa4 454 SUPERFAMILY SSF102405 118 330 7.33E-41 T 28-03-2018 DDI_RS03680 62d52c1ca917f538560011cd04be7aa4 454 Gene3D G3DSA:3.30.1850.10 3 111 2.5E-49 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 DDI_RS03680 62d52c1ca917f538560011cd04be7aa4 454 Pfam PF03641 Possible lysine decarboxylase 190 329 4.3E-33 T 28-03-2018 IPR031100 LOG family DDI_RS03680 62d52c1ca917f538560011cd04be7aa4 454 Gene3D G3DSA:3.40.50.450 124 452 6.5E-101 T 28-03-2018 DDI_RS03680 62d52c1ca917f538560011cd04be7aa4 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 9.4E-48 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 DDI_RS05635 e43d2a0df18199a91c54c0bbfc1ca579 227 Gene3D G3DSA:1.20.1050.10 98 223 8.7E-23 T 28-03-2018 DDI_RS05635 e43d2a0df18199a91c54c0bbfc1ca579 227 SUPERFAMILY SSF47616 81 205 2.37E-27 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS05635 e43d2a0df18199a91c54c0bbfc1ca579 227 Gene3D G3DSA:3.40.30.10 2 97 5.3E-28 T 28-03-2018 DDI_RS05635 e43d2a0df18199a91c54c0bbfc1ca579 227 SUPERFAMILY SSF52833 5 105 7.35E-25 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS05635 e43d2a0df18199a91c54c0bbfc1ca579 227 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 83 4.3E-18 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS05635 e43d2a0df18199a91c54c0bbfc1ca579 227 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 191 1.0E-10 T 28-03-2018 DDI_RS00805 c6138556171cecf3653e0282cceb883c 422 SUPERFAMILY SSF56349 97 392 7.36E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS00805 c6138556171cecf3653e0282cceb883c 422 Pfam PF00589 Phage integrase family 210 385 2.0E-17 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS00805 c6138556171cecf3653e0282cceb883c 422 Pfam PF13356 Arm DNA-binding domain 3 87 8.2E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain DDI_RS00805 c6138556171cecf3653e0282cceb883c 422 Gene3D G3DSA:1.10.443.10 206 394 1.9E-19 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS00805 c6138556171cecf3653e0282cceb883c 422 Gene3D G3DSA:1.10.150.130 87 205 3.8E-17 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS07295 404617d07e8d70ca3ff23d026a540a13 228 SUPERFAMILY SSF47616 81 197 1.78E-13 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS07295 404617d07e8d70ca3ff23d026a540a13 228 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 176 6.0E-6 T 28-03-2018 DDI_RS07295 404617d07e8d70ca3ff23d026a540a13 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 79 5.6E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS07295 404617d07e8d70ca3ff23d026a540a13 228 SUPERFAMILY SSF52833 3 79 3.8E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS07295 404617d07e8d70ca3ff23d026a540a13 228 Gene3D G3DSA:1.20.1050.10 96 204 1.0E-16 T 28-03-2018 DDI_RS07295 404617d07e8d70ca3ff23d026a540a13 228 Gene3D G3DSA:3.40.30.10 1 95 1.2E-22 T 28-03-2018 DDI_RS03070 fcb212efc3164a8da4279a0de9ddb233 256 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 29.199 T 28-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 DDI_RS03070 fcb212efc3164a8da4279a0de9ddb233 256 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 16 232 1.2E-41 T 28-03-2018 DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 Gene3D G3DSA:1.10.10.10 1 91 2.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 SUPERFAMILY SSF53850 89 291 2.35E-36 T 28-03-2018 DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 Pfam PF03466 LysR substrate binding domain 88 288 1.2E-36 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 SUPERFAMILY SSF46785 1 110 3.54E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 Gene3D G3DSA:3.40.190.10 174 260 8.4E-14 T 28-03-2018 DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS20905 99db11d20dfaa610a9b728407b31f562 302 Gene3D G3DSA:3.40.190.10 92 173 2.8E-18 T 28-03-2018 DDI_RS05685 d7f686a535129ef5348b6a55e5eba81c 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 9.9E-41 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 DDI_RS05685 d7f686a535129ef5348b6a55e5eba81c 141 SUPERFAMILY SSF52833 3 136 1.6E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS05685 d7f686a535129ef5348b6a55e5eba81c 141 Gene3D G3DSA:3.40.30.10 1 141 6.1E-45 T 28-03-2018 DDI_RS05685 d7f686a535129ef5348b6a55e5eba81c 141 Pfam PF03960 ArsC family 7 114 4.6E-20 T 28-03-2018 IPR006660 Arsenate reductase-like DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 SUPERFAMILY SSF53067 2 242 2.67E-76 T 28-03-2018 DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 SUPERFAMILY SSF53067 242 484 1.5E-62 T 28-03-2018 DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 Gene3D G3DSA:3.30.420.40 1 237 8.2E-81 T 28-03-2018 DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 TIGRFAM TIGR01312 XylB: xylulokinase 3 479 1.7E-184 T 28-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 6.0E-82 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 PIRSF PIRSF000538 1 486 3.9E-139 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 437 2.8E-33 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDI_RS20630 8667d6f07e2ad72cf47137bb27fc07f7 486 Gene3D G3DSA:3.30.420.40 238 484 8.1E-59 T 28-03-2018 DDI_RS12205 33a8f6bd11efd055aaf4a989aa6821c0 66 Pfam PF10781 Dextransucrase DSRB 1 59 3.4E-36 T 28-03-2018 IPR019717 Dextransucrase DSRB DDI_RS09935 35f0d209d750fc57dc73ec6ff0c4ba7e 300 SUPERFAMILY SSF161098 23 300 2.15E-71 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09935 35f0d209d750fc57dc73ec6ff0c4ba7e 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 294 4.4E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09935 35f0d209d750fc57dc73ec6ff0c4ba7e 300 Gene3D G3DSA:1.10.3720.10 17 287 6.5E-43 T 28-03-2018 DDI_RS01045 bc56b75ee55f1e9ed63782cc8bef9445 305 SUPERFAMILY SSF161098 92 291 5.49E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01045 bc56b75ee55f1e9ed63782cc8bef9445 305 Gene3D G3DSA:1.10.3720.10 2 292 3.5E-43 T 28-03-2018 DDI_RS01045 bc56b75ee55f1e9ed63782cc8bef9445 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 3.9E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06075 57877a01732ae768f4f108a02c421872 97 Gene3D G3DSA:3.30.70.240 1 96 5.9E-27 T 28-03-2018 DDI_RS06075 57877a01732ae768f4f108a02c421872 97 SUPERFAMILY SSF143430 1 89 3.14E-26 T 28-03-2018 DDI_RS06075 57877a01732ae768f4f108a02c421872 97 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 91 14.315 T 28-03-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 DDI_RS06075 57877a01732ae768f4f108a02c421872 97 PIRSF PIRSF032582 1 97 1.2E-35 T 28-03-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 DDI_RS06075 57877a01732ae768f4f108a02c421872 97 Pfam PF09827 CRISPR associated protein Cas2 1 78 9.3E-23 T 28-03-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 DDI_RS06075 57877a01732ae768f4f108a02c421872 97 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 87 3.2E-14 T 28-03-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 DDI_RS12490 d93404b2a29d001879b53d53b4925de4 265 SMART SM00382 35 219 1.0E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS12490 d93404b2a29d001879b53d53b4925de4 265 Gene3D G3DSA:3.40.50.300 2 253 3.9E-59 T 28-03-2018 DDI_RS12490 d93404b2a29d001879b53d53b4925de4 265 SUPERFAMILY SSF52540 6 235 1.39E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS12490 d93404b2a29d001879b53d53b4925de4 265 Pfam PF00005 ABC transporter 26 169 3.2E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS12490 d93404b2a29d001879b53d53b4925de4 265 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS12490 d93404b2a29d001879b53d53b4925de4 265 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 26 257 3.6E-99 T 28-03-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 DDI_RS20065 f4ce5e7c32a6d875fb2bf7e771578ab0 84 SUPERFAMILY SSF47336 1 80 6.94E-19 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS20065 f4ce5e7c32a6d875fb2bf7e771578ab0 84 Gene3D G3DSA:1.10.1200.10 4 81 1.1E-18 T 28-03-2018 DDI_RS20065 f4ce5e7c32a6d875fb2bf7e771578ab0 84 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 14.413 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DDI_RS20065 f4ce5e7c32a6d875fb2bf7e771578ab0 84 Pfam PF00550 Phosphopantetheine attachment site 9 75 1.7E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 287 2.8E-78 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 SUPERFAMILY SSF111364 30 287 2.48E-82 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 Gene3D G3DSA:2.40.230.20 24 287 1.2E-71 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 149 174 1.0E-101 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 263 286 1.0E-101 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 114 134 1.0E-101 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 181 204 1.0E-101 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 26 48 1.0E-101 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 53 77 1.0E-101 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 233 252 1.0E-101 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 DDI_RS16635 723dbaf97dddc91592406e0119b52f84 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 88 109 1.0E-101 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 DDI_RS07485 bb1715754378a3862e5ba14945fe7cb4 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 314 8.0E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07485 bb1715754378a3862e5ba14945fe7cb4 317 Gene3D G3DSA:1.10.3720.10 1 303 2.9E-40 T 28-03-2018 DDI_RS07485 bb1715754378a3862e5ba14945fe7cb4 317 SUPERFAMILY SSF161098 91 297 1.44E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14175 c689daf60278c4dacb4d27db0376d0cb 365 SUPERFAMILY SSF51126 25 363 1.4E-69 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS14175 c689daf60278c4dacb4d27db0376d0cb 365 ProSitePatterns PS00503 Pectinesterase signature 2. 193 202 - T 28-03-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 DDI_RS14175 c689daf60278c4dacb4d27db0376d0cb 365 Gene3D G3DSA:2.160.20.10 25 365 7.8E-77 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS14175 c689daf60278c4dacb4d27db0376d0cb 365 Pfam PF01095 Pectinesterase 30 354 6.2E-42 T 28-03-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 DDI_RS19595 b853150394de077aeee7efb7a271eb5a 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 DDI_RS19595 b853150394de077aeee7efb7a271eb5a 271 SUPERFAMILY SSF56784 1 269 6.55E-77 T 28-03-2018 IPR023214 HAD-like domain DDI_RS19595 b853150394de077aeee7efb7a271eb5a 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.5E-29 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DDI_RS19595 b853150394de077aeee7efb7a271eb5a 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 28-03-2018 DDI_RS19595 b853150394de077aeee7efb7a271eb5a 271 Gene3D G3DSA:3.40.50.1000 1 271 6.3E-49 T 28-03-2018 IPR023214 HAD-like domain DDI_RS19595 b853150394de077aeee7efb7a271eb5a 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 3.8E-67 T 28-03-2018 IPR000150 Cof family GO:0016787 DDI_RS19595 b853150394de077aeee7efb7a271eb5a 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 5.6E-67 T 28-03-2018 IPR023214 HAD-like domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 Gene3D G3DSA:3.30.450.20 323 455 1.2E-20 T 28-03-2018 DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 Gene3D G3DSA:3.30.450.40 8 181 3.4E-21 T 28-03-2018 IPR029016 GAF domain-like DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 Pfam PF08448 PAS fold 331 434 5.0E-8 T 28-03-2018 IPR013656 PAS fold-4 DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 Gene3D G3DSA:3.30.450.20 182 322 7.4E-28 T 28-03-2018 DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 Gene3D G3DSA:3.30.70.270 456 602 2.5E-49 T 28-03-2018 DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SUPERFAMILY SSF55073 451 599 2.2E-38 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 Pfam PF00990 Diguanylate cyclase, GGDEF domain 446 599 6.7E-43 T 28-03-2018 IPR000160 GGDEF domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SUPERFAMILY SSF55785 184 295 1.48E-18 T 28-03-2018 IPR000014 PAS domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 Pfam PF01590 GAF domain 31 151 3.1E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 183 301 5.2E-16 T 28-03-2018 IPR000014 PAS domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 321 434 1.6E-7 T 28-03-2018 IPR000014 PAS domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SUPERFAMILY SSF55785 313 433 9.99E-15 T 28-03-2018 IPR000014 PAS domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SUPERFAMILY SSF55781 29 166 1.98E-22 T 28-03-2018 IPR029016 GAF domain-like DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SMART SM00267 435 607 1.8E-45 T 28-03-2018 IPR000160 GGDEF domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SMART SM00091 179 245 8.9E-8 T 28-03-2018 IPR000014 PAS domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SMART SM00091 324 390 9.1E-5 T 28-03-2018 IPR000014 PAS domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 443 599 1.2E-39 T 28-03-2018 IPR000160 GGDEF domain DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SMART SM00065 26 168 1.3E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 Pfam PF08447 PAS fold 203 280 4.1E-11 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 DDI_RS10800 de367af31832a0ac432ace2e92b3e6c8 608 SMART SM00086 252 294 3.0E-5 T 28-03-2018 IPR001610 PAC motif DDI_RS14440 51e2a23bc0d5a86e5b95db52fc5c3f54 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 279 6.5E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14440 51e2a23bc0d5a86e5b95db52fc5c3f54 294 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 24 273 5.9E-93 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DDI_RS14440 51e2a23bc0d5a86e5b95db52fc5c3f54 294 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 23 277 4.1E-113 T 28-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 DDI_RS14440 51e2a23bc0d5a86e5b95db52fc5c3f54 294 Gene3D G3DSA:1.10.3720.10 21 285 7.7E-41 T 28-03-2018 DDI_RS14440 51e2a23bc0d5a86e5b95db52fc5c3f54 294 SUPERFAMILY SSF161098 20 274 3.4E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15210 bb9090e1093a6eba76a02fc10d33b4c9 470 Gene3D G3DSA:3.90.1300.10 2 468 1.9E-125 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS15210 bb9090e1093a6eba76a02fc10d33b4c9 470 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 11 456 1.1E-205 T 28-03-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 DDI_RS15210 bb9090e1093a6eba76a02fc10d33b4c9 470 SUPERFAMILY SSF75304 3 452 2.22E-122 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS15210 bb9090e1093a6eba76a02fc10d33b4c9 470 Pfam PF01425 Amidase 26 440 8.1E-94 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS20045 b41da272a28cec994aee4cdf28603092 355 Gene3D G3DSA:3.40.50.150 97 342 1.9E-21 T 28-03-2018 DDI_RS20045 b41da272a28cec994aee4cdf28603092 355 Pfam PF00891 O-methyltransferase 181 334 1.6E-14 T 28-03-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 DDI_RS20045 b41da272a28cec994aee4cdf28603092 355 SUPERFAMILY SSF53335 100 341 6.62E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 SUPERFAMILY SSF52540 197 441 2.73E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 Pfam PF00158 Sigma-54 interaction domain 198 362 1.7E-65 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 Gene3D G3DSA:1.10.8.60 371 429 3.1E-19 T 28-03-2018 DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 SMART SM00382 218 361 1.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 Gene3D G3DSA:3.30.450.40 1 184 3.1E-7 T 28-03-2018 IPR029016 GAF domain-like DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 411 420 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 222 235 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 284 299 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 Gene3D G3DSA:3.40.50.300 193 370 3.5E-27 T 28-03-2018 DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 Gene3D G3DSA:1.10.10.60 430 512 4.0E-9 T 28-03-2018 DDI_RS06635 fc39c3caee4da5f2456bd62942bac152 512 SUPERFAMILY SSF46689 412 511 5.38E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 88.273 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 Pfam PF01565 FAD binding domain 24 152 5.3E-23 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 332 2.5E-109 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 SUPERFAMILY SSF56194 205 342 4.58E-53 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 Gene3D G3DSA:3.30.43.10 6 71 3.4E-17 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 208 332 1.7E-37 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 SUPERFAMILY SSF56176 7 200 8.41E-45 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 Gene3D G3DSA:3.30.465.10 72 221 2.0E-49 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 DDI_RS21385 65d8d19551e17e9c8c77e8308abeba9a 345 Gene3D G3DSA:3.90.78.10 224 337 2.2E-42 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS17595 3d783dbbd621b13721213c9cd2d26e4a 85 Pfam PF01381 Helix-turn-helix 11 63 6.7E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS17595 3d783dbbd621b13721213c9cd2d26e4a 85 SMART SM00530 10 65 3.6E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS17595 3d783dbbd621b13721213c9cd2d26e4a 85 SUPERFAMILY SSF47413 3 68 1.02E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS17595 3d783dbbd621b13721213c9cd2d26e4a 85 Gene3D G3DSA:1.10.260.40 1 80 9.8E-17 T 28-03-2018 DDI_RS18770 875715488501ffe9d51a99a7d41d5b1e 357 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 332 1.3E-40 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDI_RS18770 875715488501ffe9d51a99a7d41d5b1e 357 Gene3D G3DSA:3.40.50.1970 1 159 1.2E-23 T 28-03-2018 DDI_RS18770 875715488501ffe9d51a99a7d41d5b1e 357 SUPERFAMILY SSF56796 2 352 6.93E-55 T 28-03-2018 DDI_RS18770 875715488501ffe9d51a99a7d41d5b1e 357 PIRSF PIRSF000112 2 357 1.3E-87 T 28-03-2018 DDI_RS18770 875715488501ffe9d51a99a7d41d5b1e 357 Gene3D G3DSA:1.20.1090.10 162 357 7.5E-22 T 28-03-2018 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 SUPERFAMILY SSF56037 328 436 2.88E-28 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 SUPERFAMILY SSF52402 19 235 4.63E-60 T 28-03-2018 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 SMART SM00977 366 436 8.0E-20 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 Pfam PF11734 TilS substrate C-terminal domain 366 435 1.3E-24 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 SUPERFAMILY SSF82829 236 321 3.66E-26 T 28-03-2018 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 23.191 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 Pfam PF01171 PP-loop family 25 201 1.4E-53 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 205 8.7E-50 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 Pfam PF09179 TilS substrate binding domain 250 317 3.0E-21 T 28-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 Gene3D G3DSA:3.40.50.620 17 229 1.0E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS03815 bc873329d7dc924a9b07865a3de14a62 442 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 367 411 6.4E-13 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDI_RS13290 f73beb48a26c0197e42c80f7a274d679 346 Pfam PF03211 Pectate lyase 113 318 1.5E-58 T 28-03-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 DDI_RS13290 f73beb48a26c0197e42c80f7a274d679 346 SUPERFAMILY SSF51126 118 300 1.05E-35 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS13290 f73beb48a26c0197e42c80f7a274d679 346 Gene3D G3DSA:2.160.20.10 120 345 6.6E-65 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS13290 f73beb48a26c0197e42c80f7a274d679 346 Gene3D G3DSA:2.60.40.10 20 107 6.8E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS11720 beb3ca258de97a0ce30ea9c6ef900fb2 264 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 4.7E-91 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DDI_RS11720 beb3ca258de97a0ce30ea9c6ef900fb2 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDI_RS11720 beb3ca258de97a0ce30ea9c6ef900fb2 264 PIRSF PIRSF005902 1 259 3.8E-73 T 28-03-2018 IPR001130 TatD family GO:0016788 DDI_RS11720 beb3ca258de97a0ce30ea9c6ef900fb2 264 SUPERFAMILY SSF51556 1 257 4.42E-86 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS11720 beb3ca258de97a0ce30ea9c6ef900fb2 264 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDI_RS11720 beb3ca258de97a0ce30ea9c6ef900fb2 264 Pfam PF01026 TatD related DNase 4 255 1.5E-76 T 28-03-2018 IPR001130 TatD family GO:0016788 DDI_RS11720 beb3ca258de97a0ce30ea9c6ef900fb2 264 Gene3D G3DSA:3.20.20.140 1 263 1.0E-80 T 28-03-2018 DDI_RS11720 beb3ca258de97a0ce30ea9c6ef900fb2 264 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDI_RS03185 47e486b0f340c293450e4d793b17e39f 255 Pfam PF12706 Beta-lactamase superfamily domain 30 201 3.8E-15 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS03185 47e486b0f340c293450e4d793b17e39f 255 Gene3D G3DSA:3.60.15.10 1 241 3.3E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS03185 47e486b0f340c293450e4d793b17e39f 255 SUPERFAMILY SSF56281 1 205 3.01E-33 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS14295 2a06c27a1668074842c8e91e138a9231 221 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 136 190 5.5E-21 T 28-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal DDI_RS14295 2a06c27a1668074842c8e91e138a9231 221 PIRSF PIRSF016938 1 210 8.7E-32 T 28-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 DDI_RS14295 2a06c27a1668074842c8e91e138a9231 221 SUPERFAMILY SSF89069 1 67 1.83E-19 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 DDI_RS14295 2a06c27a1668074842c8e91e138a9231 221 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 2.7E-35 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 DDI_RS00175 d804c9f4588c3214f88f3f99c1c514ad 315 Pfam PF13533 Biotin-lipoyl like 52 100 2.6E-18 T 28-03-2018 DDI_RS00175 d804c9f4588c3214f88f3f99c1c514ad 315 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 6 315 56.892 T 28-03-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA DDI_RS00175 d804c9f4588c3214f88f3f99c1c514ad 315 Gene3D G3DSA:2.40.50.100 150 268 9.9E-5 T 28-03-2018 DDI_RS00175 d804c9f4588c3214f88f3f99c1c514ad 315 Gene3D G3DSA:2.40.50.100 51 142 6.1E-14 T 28-03-2018 DDI_RS00175 d804c9f4588c3214f88f3f99c1c514ad 315 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 248 4.8E-32 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS00175 d804c9f4588c3214f88f3f99c1c514ad 315 Pfam PF13437 HlyD family secretion protein 161 243 1.0E-7 T 28-03-2018 DDI_RS00175 d804c9f4588c3214f88f3f99c1c514ad 315 SUPERFAMILY SSF111369 51 215 6.67E-24 T 28-03-2018 DDI_RS04435 3d649c3714307168d6882ff75a5748b6 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.725 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DDI_RS04435 3d649c3714307168d6882ff75a5748b6 201 Pfam PF02132 RecR protein 41 77 3.0E-15 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DDI_RS04435 3d649c3714307168d6882ff75a5748b6 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.9E-80 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DDI_RS04435 3d649c3714307168d6882ff75a5748b6 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 28-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 DDI_RS04435 3d649c3714307168d6882ff75a5748b6 201 SUPERFAMILY SSF111304 2 199 3.27E-71 T 28-03-2018 IPR023627 Recombination protein RecR DDI_RS04435 3d649c3714307168d6882ff75a5748b6 201 Gene3D G3DSA:3.40.1360.10 77 171 3.8E-34 T 28-03-2018 DDI_RS04435 3d649c3714307168d6882ff75a5748b6 201 SMART SM00493 81 166 5.1E-14 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS04435 3d649c3714307168d6882ff75a5748b6 201 Pfam PF13662 Toprim domain 82 172 1.1E-22 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS09640 c6bde501fa908cdf6e4a34f32bbec361 195 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 1.1E-53 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DDI_RS09640 c6bde501fa908cdf6e4a34f32bbec361 195 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DDI_RS09640 c6bde501fa908cdf6e4a34f32bbec361 195 Gene3D G3DSA:3.40.50.1470 1 195 9.1E-68 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DDI_RS09640 c6bde501fa908cdf6e4a34f32bbec361 195 SUPERFAMILY SSF53178 4 193 8.63E-70 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DDI_RS09640 c6bde501fa908cdf6e4a34f32bbec361 195 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 36.034 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DDI_RS09640 c6bde501fa908cdf6e4a34f32bbec361 195 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 1.1E-70 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DDI_RS09640 c6bde501fa908cdf6e4a34f32bbec361 195 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DDI_RS00390 d20e0f3b4915492d57d80f8912e99bac 196 Pfam PF13580 SIS domain 9 144 5.6E-33 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS00390 d20e0f3b4915492d57d80f8912e99bac 196 SUPERFAMILY SSF53697 4 191 4.85E-51 T 28-03-2018 DDI_RS00390 d20e0f3b4915492d57d80f8912e99bac 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 60.366 T 28-03-2018 IPR023070 DnaA initiator-associating protein DDI_RS00390 d20e0f3b4915492d57d80f8912e99bac 196 Gene3D G3DSA:3.40.50.10490 1 196 1.1E-36 T 28-03-2018 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 28-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.6E-61 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 8.9E-50 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 8.5E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 8.5E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 8.5E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.5E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 8.5E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.419 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 Gene3D G3DSA:1.10.520.20 2 106 4.8E-28 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20000 4adb5db323d82aed1b839530df61677c 177 SUPERFAMILY SSF47928 3 105 5.89E-27 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS05100 a31a3eef27a7c04441b3ceef90080e6c 115 PIRSF PIRSF000169 1 115 9.8E-41 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 DDI_RS05100 a31a3eef27a7c04441b3ceef90080e6c 115 SUPERFAMILY SSF81343 4 114 1.18E-28 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05100 a31a3eef27a7c04441b3ceef90080e6c 115 Gene3D G3DSA:1.20.1300.10 8 115 6.8E-17 T 28-03-2018 DDI_RS05100 a31a3eef27a7c04441b3ceef90080e6c 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.1E-36 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 7.1E-44 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.9E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.9E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.9E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-17 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 SUPERFAMILY SSF110324 2 82 1.43E-34 T 28-03-2018 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 Pfam PF01016 Ribosomal L27 protein 2 82 3.2E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02070 ded567dd8a72434be2d1a6d49ba7069c 85 Gene3D G3DSA:2.40.50.100 20 84 5.2E-31 T 28-03-2018 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 691 5.4E-280 T 28-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 Pfam PF00771 FHIPEP family 31 682 1.6E-268 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 28-03-2018 IPR025505 FHIPEP conserved site DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 7.0E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 7.0E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 7.0E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 7.0E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 7.0E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 7.0E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS12130 2a18c1393e9781de695dc683ed9e1b6f 695 PIRSF PIRSF005419 14 694 1.0E-244 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 Gene3D G3DSA:3.40.50.300 242 450 2.1E-20 T 28-03-2018 DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 21 700 1.8E-164 T 28-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 SMART SM00487 246 459 1.1E-8 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 198 7.1E-33 T 28-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 SUPERFAMILY SSF52540 210 428 3.74E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 SUPERFAMILY SSF52540 525 550 3.68E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 SUPERFAMILY SSF52540 388 455 3.68E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 SUPERFAMILY SSF52540 602 685 3.68E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03430 eda84f419f2868e03e170d0640c4cbdf 1031 Pfam PF04851 Type III restriction enzyme, res subunit 254 422 5.9E-17 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DDI_RS08890 2c1674fb312e00fc7a424712c30af5dd 424 Pfam PF04285 Protein of unknown function (DUF444) 4 420 4.2E-183 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 DDI_RS08890 2c1674fb312e00fc7a424712c30af5dd 424 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.047 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 DDI_RS05190 8bb7d523d93a757ad83a538ac9db6c6d 274 Pfam PF13432 Tetratricopeptide repeat 161 225 1.1E-9 T 28-03-2018 DDI_RS05190 8bb7d523d93a757ad83a538ac9db6c6d 274 Pfam PF13174 Tetratricopeptide repeat 229 261 1.8E-8 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDI_RS05190 8bb7d523d93a757ad83a538ac9db6c6d 274 Gene3D G3DSA:1.20.5.50 25 113 1.2E-5 T 28-03-2018 DDI_RS05190 8bb7d523d93a757ad83a538ac9db6c6d 274 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 155 271 2.0E-44 T 28-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal DDI_RS05190 8bb7d523d93a757ad83a538ac9db6c6d 274 Gene3D G3DSA:1.25.40.10 153 274 1.7E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS05190 8bb7d523d93a757ad83a538ac9db6c6d 274 SUPERFAMILY SSF48452 156 265 5.31E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS05190 8bb7d523d93a757ad83a538ac9db6c6d 274 Pfam PF16331 TolA binding protein trimerisation 37 110 1.2E-24 T 28-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 DDI_RS05190 8bb7d523d93a757ad83a538ac9db6c6d 274 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 274 20.238 T 28-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 DDI_RS21395 62f2d2a71c783ffc46d2883b623923ec 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 1.7E-168 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DDI_RS21395 62f2d2a71c783ffc46d2883b623923ec 316 PIRSF PIRSF000545 1 316 5.9E-145 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DDI_RS21395 62f2d2a71c783ffc46d2883b623923ec 316 Gene3D G3DSA:3.40.50.300 9 316 8.8E-52 T 28-03-2018 DDI_RS21395 62f2d2a71c783ffc46d2883b623923ec 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 1.1E-15 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 DDI_RS21395 62f2d2a71c783ffc46d2883b623923ec 316 SUPERFAMILY SSF52540 10 315 1.45E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS21395 62f2d2a71c783ffc46d2883b623923ec 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 186.459 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DDI_RS03655 c911f77087c3d2dfc5d1098d3423e497 401 SUPERFAMILY SSF53383 6 396 1.48E-110 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS03655 c911f77087c3d2dfc5d1098d3423e497 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DDI_RS03655 c911f77087c3d2dfc5d1098d3423e497 401 Pfam PF00266 Aminotransferase class-V 21 388 9.3E-136 T 28-03-2018 IPR000192 Aminotransferase class V domain DDI_RS03655 c911f77087c3d2dfc5d1098d3423e497 401 Gene3D G3DSA:3.40.640.10 31 278 3.0E-56 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS03655 c911f77087c3d2dfc5d1098d3423e497 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 1.2E-210 T 28-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 DDI_RS03655 c911f77087c3d2dfc5d1098d3423e497 401 Gene3D G3DSA:3.90.1150.10 279 395 4.7E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS15145 a6c7fc7301c5fa2b125042543d8e8105 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 8.7E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS15145 a6c7fc7301c5fa2b125042543d8e8105 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 8.7E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS15145 a6c7fc7301c5fa2b125042543d8e8105 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 8.7E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS15145 a6c7fc7301c5fa2b125042543d8e8105 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 8.7E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS15145 a6c7fc7301c5fa2b125042543d8e8105 230 SUPERFAMILY SSF56784 1 221 1.97E-54 T 28-03-2018 IPR023214 HAD-like domain DDI_RS15145 a6c7fc7301c5fa2b125042543d8e8105 230 Gene3D G3DSA:3.40.50.1000 2 223 8.4E-13 T 28-03-2018 IPR023214 HAD-like domain DDI_RS15145 a6c7fc7301c5fa2b125042543d8e8105 230 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 40.516 T 28-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 DDI_RS15145 a6c7fc7301c5fa2b125042543d8e8105 230 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 222 7.5E-83 T 28-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.492 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 4.2E-228 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 99 1.6E-6 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 SUPERFAMILY SSF52540 3 441 5.6E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 SMART SM01086 335 434 9.8E-23 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 Gene3D G3DSA:1.10.8.10 124 200 7.6E-30 T 28-03-2018 DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 SMART SM00382 49 332 4.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 185 329 3.8E-41 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 Gene3D G3DSA:1.10.8.60 335 431 1.1E-28 T 28-03-2018 DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 2.8E-6 T 28-03-2018 IPR019489 Clp ATPase, C-terminal DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 Gene3D G3DSA:1.10.8.10 201 242 2.2E-15 T 28-03-2018 DDI_RS19100 ee4b3b2b331fcad458cfe88d2a0cf239 443 Gene3D G3DSA:3.40.50.300 43 123 1.3E-9 T 28-03-2018 DDI_RS01700 c6cf978591aaa145cf854bf7e90c155d 315 Gene3D G3DSA:2.160.20.10 3 60 1.1E-7 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS01700 c6cf978591aaa145cf854bf7e90c155d 315 Pfam PF00544 Pectate lyase 57 242 1.5E-51 T 28-03-2018 IPR002022 Pectate lyase DDI_RS01700 c6cf978591aaa145cf854bf7e90c155d 315 SMART SM00656 24 248 1.4E-65 T 28-03-2018 IPR002022 Pectate lyase DDI_RS01700 c6cf978591aaa145cf854bf7e90c155d 315 SUPERFAMILY SSF51126 10 308 1.66E-55 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS01700 c6cf978591aaa145cf854bf7e90c155d 315 Gene3D G3DSA:2.160.20.10 61 310 2.5E-34 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 110 1.4E-33 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 SUPERFAMILY SSF54826 2 112 1.39E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 Gene3D G3DSA:3.20.20.120 101 377 1.1E-60 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 Gene3D G3DSA:3.30.390.10 6 100 1.9E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 Pfam PF13378 Enolase C-terminal domain-like 141 379 3.1E-42 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 SMART SM00922 128 259 2.1E-15 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DDI_RS13295 02f2d07a3917cccb92faf6b50d679b82 404 SUPERFAMILY SSF51604 98 387 2.88E-79 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS15155 a59f98d671049c8eac96b0c45f8b2b8f 385 Gene3D G3DSA:3.40.640.10 44 270 1.5E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS15155 a59f98d671049c8eac96b0c45f8b2b8f 385 Pfam PF00155 Aminotransferase class I and II 32 382 7.3E-57 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS15155 a59f98d671049c8eac96b0c45f8b2b8f 385 Gene3D G3DSA:3.90.1150.10 271 385 1.3E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS15155 a59f98d671049c8eac96b0c45f8b2b8f 385 SUPERFAMILY SSF53383 8 384 5.98E-98 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS17400 4abd2759dfa893a82f55bd51b002ad69 256 Pfam PF03746 LamB/YcsF family 3 240 4.3E-87 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF DDI_RS17400 4abd2759dfa893a82f55bd51b002ad69 256 Gene3D G3DSA:3.20.20.370 2 249 1.9E-89 T 28-03-2018 DDI_RS17400 4abd2759dfa893a82f55bd51b002ad69 256 SUPERFAMILY SSF88713 1 249 3.48E-83 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DDI_RS11625 7ac50f08a80dea89f3cc1b83bd2fd31d 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 2.0E-138 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DDI_RS11625 7ac50f08a80dea89f3cc1b83bd2fd31d 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 3.5E-14 T 28-03-2018 IPR025857 MacB-like periplasmic core domain DDI_RS11625 7ac50f08a80dea89f3cc1b83bd2fd31d 400 Pfam PF02687 FtsX-like permease family 297 393 1.0E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 2.5E-58 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 SUPERFAMILY SSF48179 210 343 2.21E-39 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.3E-133 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 SUPERFAMILY SSF51735 30 209 3.06E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 Gene3D G3DSA:3.40.50.720 1 42 3.7E-4 T 28-03-2018 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 Gene3D G3DSA:3.40.50.720 56 208 2.7E-51 T 28-03-2018 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.2E-25 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 350 483 7.3E-21 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 SUPERFAMILY SSF48179 348 485 1.22E-40 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 486 38.969 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDI_RS18905 c87e7ccfe05d499670f6ea2cf853eb8a 492 Gene3D G3DSA:1.10.1040.10 210 488 7.5E-85 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 Gene3D G3DSA:3.30.450.20 29 162 7.2E-17 T 28-03-2018 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 SUPERFAMILY SSF55890 321 370 5.75E-6 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 SUPERFAMILY SSF103190 36 165 4.32E-28 T 28-03-2018 IPR029151 Periplasmic sensor domain-like DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 529 7.1E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 SMART SM00091 211 281 8.5E-4 T 28-03-2018 IPR000014 PAS domain DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 SUPERFAMILY SSF55874 394 528 2.88E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 Gene3D G3DSA:3.30.565.10 391 531 1.8E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 Pfam PF17203 Single cache domain 3 36 162 8.8E-15 T 28-03-2018 IPR033463 Single cache domain 3 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 508 3.2E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 3.2E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 527 3.2E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 Gene3D G3DSA:3.30.450.20 210 312 2.7E-7 T 28-03-2018 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 SUPERFAMILY SSF55785 208 312 3.14E-6 T 28-03-2018 IPR000014 PAS domain DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 Gene3D G3DSA:1.10.287.130 313 376 5.3E-12 T 28-03-2018 DDI_RS08265 d1666dff33b6d0ff385388c64f57c61d 531 SMART SM00387 419 530 1.5E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 535 551 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 Gene3D G3DSA:3.40.50.2300 364 468 6.4E-18 T 28-03-2018 DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 492 630 1.6E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 Pfam PF02378 Phosphotransferase system, EIIC 18 278 9.7E-19 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 SUPERFAMILY SSF55804 491 631 1.44E-41 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 377 453 2.9E-10 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 347 6.2E-182 T 28-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 SUPERFAMILY SSF52794 376 463 1.74E-23 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS20595 f12c635c44b8f7f01b1a0557319aafc1 635 Gene3D G3DSA:3.40.930.10 490 633 1.1E-35 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 DDI_RS04970 35daf022f7061f14dc1d016a30edbd9c 266 SUPERFAMILY SSF100950 1 264 5.13E-103 T 28-03-2018 DDI_RS04970 35daf022f7061f14dc1d016a30edbd9c 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 3.2E-133 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 DDI_RS04970 35daf022f7061f14dc1d016a30edbd9c 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 39.686 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 DDI_RS04970 35daf022f7061f14dc1d016a30edbd9c 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 28-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 DDI_RS04970 35daf022f7061f14dc1d016a30edbd9c 266 Gene3D G3DSA:3.40.50.1360 1 266 1.2E-86 T 28-03-2018 DDI_RS04970 35daf022f7061f14dc1d016a30edbd9c 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 1.5E-20 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DDI_RS02290 c0eb6166753f20aa1ba2e4452158252a 331 Gene3D G3DSA:3.20.20.100 1 330 6.9E-110 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS02290 c0eb6166753f20aa1ba2e4452158252a 331 SUPERFAMILY SSF51430 1 311 1.28E-101 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS02290 c0eb6166753f20aa1ba2e4452158252a 331 Pfam PF00248 Aldo/keto reductase family 16 309 6.9E-75 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS07030 b62633f1b2124fa5e991173580b6e1a0 143 SMART SM00860 25 137 4.3E-7 T 28-03-2018 IPR018958 Knr4/Smi1-like domain DDI_RS07030 b62633f1b2124fa5e991173580b6e1a0 143 Gene3D G3DSA:3.40.1580.10 6 141 1.7E-15 T 28-03-2018 DDI_RS07030 b62633f1b2124fa5e991173580b6e1a0 143 SUPERFAMILY SSF160631 2 139 4.05E-29 T 28-03-2018 DDI_RS07030 b62633f1b2124fa5e991173580b6e1a0 143 Pfam PF14568 SMI1-KNR4 cell-wall 29 135 2.1E-16 T 28-03-2018 DDI_RS14260 52539a95dec89f1b8778b7e056d9b44c 244 Pfam PF02565 Recombination protein O C terminal 85 226 1.2E-22 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DDI_RS14260 52539a95dec89f1b8778b7e056d9b44c 244 SUPERFAMILY SSF50249 4 75 3.43E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS14260 52539a95dec89f1b8778b7e056d9b44c 244 SUPERFAMILY SSF57863 85 174 7.85E-9 T 28-03-2018 DDI_RS14260 52539a95dec89f1b8778b7e056d9b44c 244 Pfam PF11967 Recombination protein O N terminal 4 76 9.7E-23 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DDI_RS14260 52539a95dec89f1b8778b7e056d9b44c 244 Gene3D G3DSA:2.40.50.140 1 76 3.7E-24 T 28-03-2018 DDI_RS14260 52539a95dec89f1b8778b7e056d9b44c 244 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.309 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DDI_RS14260 52539a95dec89f1b8778b7e056d9b44c 244 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.2E-40 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DDI_RS05910 9bfe88c602db43e37f7282994c7dc5eb 673 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 2.3E-10 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05910 9bfe88c602db43e37f7282994c7dc5eb 673 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 2.3E-10 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05910 9bfe88c602db43e37f7282994c7dc5eb 673 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 2.3E-10 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05910 9bfe88c602db43e37f7282994c7dc5eb 673 Pfam PF00361 Proton-conducting membrane transporter 138 423 1.4E-55 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS02640 20eb4a2dead6af07d1a7e94f752eeddc 274 SMART SM00382 28 227 1.6E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS02640 20eb4a2dead6af07d1a7e94f752eeddc 274 Gene3D G3DSA:3.40.50.300 1 270 1.0E-52 T 28-03-2018 DDI_RS02640 20eb4a2dead6af07d1a7e94f752eeddc 274 Pfam PF00005 ABC transporter 24 178 1.1E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS02640 20eb4a2dead6af07d1a7e94f752eeddc 274 SUPERFAMILY SSF52540 1 245 6.41E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20320 876663c0e03515e9d998bbcd8e501e69 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 2.3E-37 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DDI_RS20320 876663c0e03515e9d998bbcd8e501e69 119 Pfam PF00825 Ribonuclease P 6 111 3.3E-33 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DDI_RS20320 876663c0e03515e9d998bbcd8e501e69 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 3.0E-41 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DDI_RS20320 876663c0e03515e9d998bbcd8e501e69 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.962 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DDI_RS20320 876663c0e03515e9d998bbcd8e501e69 119 SUPERFAMILY SSF54211 5 116 1.31E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS20320 876663c0e03515e9d998bbcd8e501e69 119 Gene3D G3DSA:3.30.230.10 1 119 7.6E-33 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS20320 876663c0e03515e9d998bbcd8e501e69 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 28-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 DDI_RS18575 eadece9066c12d5097e6f084fc20c618 438 Pfam PF02447 GntP family permease 1 436 3.3E-180 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DDI_RS18575 eadece9066c12d5097e6f084fc20c618 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 6.9E-194 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DDI_RS18575 eadece9066c12d5097e6f084fc20c618 438 PIRSF PIRSF002746 1 438 4.6E-158 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 SMART SM00347 46 148 4.7E-29 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 Pfam PF01047 MarR family 53 112 2.3E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 SUPERFAMILY SSF46785 19 165 1.23E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 Gene3D G3DSA:1.10.10.10 13 168 1.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.3E-20 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.3E-20 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.3E-20 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS15270 d98840965eed45cdc363ffd930426a8e 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.3E-20 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS03360 85e5b216b783bf6cb6a15a61f4fff327 363 SUPERFAMILY SSF51395 3 360 3.02E-121 T 28-03-2018 DDI_RS03360 85e5b216b783bf6cb6a15a61f4fff327 363 Gene3D G3DSA:3.20.20.70 5 363 3.6E-127 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS03360 85e5b216b783bf6cb6a15a61f4fff327 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 335 1.8E-86 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 PRINTS PR00069 Aldo-keto reductase signature 157 186 7.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 PRINTS PR00069 Aldo-keto reductase signature 196 220 7.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 PRINTS PR00069 Aldo-keto reductase signature 123 140 7.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 PRINTS PR00069 Aldo-keto reductase signature 37 61 7.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 PRINTS PR00069 Aldo-keto reductase signature 91 109 7.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 Pfam PF00248 Aldo/keto reductase family 18 192 1.5E-35 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 Pfam PF00248 Aldo/keto reductase family 202 258 2.0E-8 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 PIRSF PIRSF000097 1 115 8.7E-43 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 PIRSF PIRSF000097 110 272 4.3E-49 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 SUPERFAMILY SSF51430 3 267 5.76E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS00485 4a405b1731526afcf1a69d1f73d7e358 281 Gene3D G3DSA:3.20.20.100 1 278 2.0E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS14880 d88ed0b210032e31ee0c40dbdc82c298 330 Gene3D G3DSA:1.10.3470.10 30 310 5.5E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS14880 d88ed0b210032e31ee0c40dbdc82c298 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 5.0E-40 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 439 4.7E-206 T 28-03-2018 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.1E-153 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 SUPERFAMILY SSF102114 127 375 8.37E-64 T 28-03-2018 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 Pfam PF04055 Radical SAM superfamily 151 325 5.7E-27 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 4.8E-29 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.782 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 SMART SM00729 147 367 4.4E-62 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 Gene3D G3DSA:3.20.20.70 9 423 1.8E-53 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS04910 51c560dda2bb64d3db299b7a4c3e72be 474 Pfam PF01938 TRAM domain 378 439 7.9E-19 T 28-03-2018 IPR002792 TRAM domain DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.3E-53 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 28-03-2018 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.159 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 Pfam PF00453 Ribosomal protein L20 3 109 3.0E-49 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 Gene3D G3DSA:1.10.1900.20 55 116 1.9E-29 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS10005 5f2bc728605bb36fccc1b8ac37a3ecd0 118 SUPERFAMILY SSF74731 3 117 1.1E-50 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS02770 a273b28197e9ebebd08773f0385a8db8 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 4.6E-22 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDI_RS02770 a273b28197e9ebebd08773f0385a8db8 328 SUPERFAMILY SSF55347 124 289 6.21E-36 T 28-03-2018 DDI_RS02770 a273b28197e9ebebd08773f0385a8db8 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 235 3.5E-8 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 DDI_RS02770 a273b28197e9ebebd08773f0385a8db8 328 Gene3D G3DSA:3.30.360.10 131 328 1.7E-45 T 28-03-2018 DDI_RS02770 a273b28197e9ebebd08773f0385a8db8 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 326 8.3E-137 T 28-03-2018 IPR030827 Inositol 2-dehydrogenase DDI_RS02770 a273b28197e9ebebd08773f0385a8db8 328 SUPERFAMILY SSF51735 2 144 5.58E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02770 a273b28197e9ebebd08773f0385a8db8 328 Gene3D G3DSA:3.40.50.720 1 130 4.7E-35 T 28-03-2018 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 Gene3D G3DSA:1.50.10.10 17 332 9.1E-78 T 28-03-2018 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 Pfam PF01270 Glycosyl hydrolases family 8 1 331 2.4E-148 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 SUPERFAMILY SSF48208 21 331 4.16E-87 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 317 331 1.0E-31 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 50 63 1.0E-31 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 108 126 1.0E-31 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 212 223 1.0E-31 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 172 189 1.0E-31 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 237 246 1.0E-31 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS19460 e35b6332cde3037e94fc9001404cfc39 332 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 108 126 - T 28-03-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DDI_RS07655 f80cee7f1fbfb16d9b9138f56a008d12 405 SUPERFAMILY SSF103473 1 392 5.23E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS07655 f80cee7f1fbfb16d9b9138f56a008d12 405 Pfam PF07690 Major Facilitator Superfamily 17 319 1.0E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS07655 f80cee7f1fbfb16d9b9138f56a008d12 405 Gene3D G3DSA:1.20.1250.20 203 396 6.3E-23 T 28-03-2018 DDI_RS07655 f80cee7f1fbfb16d9b9138f56a008d12 405 Gene3D G3DSA:1.20.1250.20 4 198 6.1E-18 T 28-03-2018 DDI_RS18665 5064c817666f6fd904684257d39355d3 352 Pfam PF05145 Transition state regulatory protein AbrB 33 343 1.0E-93 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 DDI_RS18665 5064c817666f6fd904684257d39355d3 352 PIRSF PIRSF038991 1 349 1.1E-81 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 DDI_RS18665 5064c817666f6fd904684257d39355d3 352 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 10 163 9.6E-41 T 28-03-2018 IPR017516 AbrB duplication DDI_RS18665 5064c817666f6fd904684257d39355d3 352 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 190 343 1.5E-40 T 28-03-2018 IPR017516 AbrB duplication DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 Gene3D G3DSA:3.40.190.10 84 218 1.8E-14 T 28-03-2018 DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 Gene3D G3DSA:1.10.10.10 1 83 2.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 Pfam PF03466 LysR substrate binding domain 86 266 1.9E-18 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 SUPERFAMILY SSF46785 1 84 5.84E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 271 50.082 T 28-03-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 DDI_RS18970 0e6c624fc995c04b64f099509c64952b 274 SUPERFAMILY SSF53850 88 267 4.71E-18 T 28-03-2018 DDI_RS17965 b167d93bd0e2cfe154407c29a2d63a2b 130 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-34 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17965 b167d93bd0e2cfe154407c29a2d63a2b 130 Gene3D G3DSA:3.90.1030.10 1 117 3.4E-50 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17965 b167d93bd0e2cfe154407c29a2d63a2b 130 SUPERFAMILY SSF64263 1 118 3.79E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17965 b167d93bd0e2cfe154407c29a2d63a2b 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17965 b167d93bd0e2cfe154407c29a2d63a2b 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17965 b167d93bd0e2cfe154407c29a2d63a2b 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.3E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15045 38f78af067e297f95af556f0a5424494 340 Pfam PF00665 Integrase core domain 118 243 1.5E-26 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 DDI_RS15045 38f78af067e297f95af556f0a5424494 340 SUPERFAMILY SSF53098 118 290 9.48E-16 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS15045 38f78af067e297f95af556f0a5424494 340 SUPERFAMILY SSF46689 4 86 2.15E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS15045 38f78af067e297f95af556f0a5424494 340 Gene3D G3DSA:1.10.10.60 2 43 2.0E-14 T 28-03-2018 DDI_RS15045 38f78af067e297f95af556f0a5424494 340 Gene3D G3DSA:3.30.420.10 114 326 1.4E-24 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS15045 38f78af067e297f95af556f0a5424494 340 Pfam PF13936 Helix-turn-helix domain 3 37 6.3E-9 T 28-03-2018 IPR025246 Transposase IS30-like HTH domain DDI_RS15250 9a1284eabe585f1ea13a37ecf6a26289 402 Gene3D G3DSA:1.10.3720.10 119 382 1.2E-36 T 28-03-2018 DDI_RS15250 9a1284eabe585f1ea13a37ecf6a26289 402 SUPERFAMILY SSF161098 187 369 8.76E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15250 9a1284eabe585f1ea13a37ecf6a26289 402 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 208 365 8.3E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.4E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 1.4E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 1.4E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.4E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 1.4E-54 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 Gene3D G3DSA:1.10.287.950 320 522 1.6E-48 T 28-03-2018 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 SUPERFAMILY SSF58104 249 521 3.14E-68 T 28-03-2018 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 186 2.9E-22 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 486 2.5E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 Gene3D G3DSA:1.20.120.30 25 189 1.5E-14 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS01130 f50398d02a8fa6b21706c2270b74cb12 529 SMART SM00283 271 518 9.4E-85 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS09805 b517f81cd3290d88213d1002687ed314 567 Gene3D G3DSA:3.30.300.30 465 566 2.2E-26 T 28-03-2018 DDI_RS09805 b517f81cd3290d88213d1002687ed314 567 Gene3D G3DSA:3.40.50.980 31 227 4.6E-42 T 28-03-2018 DDI_RS09805 b517f81cd3290d88213d1002687ed314 567 Pfam PF00501 AMP-binding enzyme 40 471 2.5E-106 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS09805 b517f81cd3290d88213d1002687ed314 567 SUPERFAMILY SSF56801 21 562 6.67E-149 T 28-03-2018 DDI_RS09805 b517f81cd3290d88213d1002687ed314 567 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 554 6.2E-18 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS09805 b517f81cd3290d88213d1002687ed314 567 Gene3D G3DSA:2.30.38.10 384 464 1.1E-27 T 28-03-2018 DDI_RS09805 b517f81cd3290d88213d1002687ed314 567 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS09805 b517f81cd3290d88213d1002687ed314 567 Gene3D G3DSA:3.40.50.980 228 383 9.9E-38 T 28-03-2018 DDI_RS13340 4f2117328527549fbcc4487508f1495a 528 Pfam PF00221 Aromatic amino acid lyase 14 468 7.7E-162 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 DDI_RS13340 4f2117328527549fbcc4487508f1495a 528 Gene3D G3DSA:1.10.275.10 3 195 1.1E-59 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal DDI_RS13340 4f2117328527549fbcc4487508f1495a 528 Gene3D G3DSA:1.20.200.10 197 509 9.8E-108 T 28-03-2018 DDI_RS13340 4f2117328527549fbcc4487508f1495a 528 SUPERFAMILY SSF48557 2 498 1.57E-162 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 DDI_RS04350 d0cfed9fdca3c847af30885698c107a0 185 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 47 150 2.5E-34 T 28-03-2018 DDI_RS07980 c3b1c7d56b57bef69614bd721cbe4b57 319 Gene3D G3DSA:1.10.3720.10 32 318 1.9E-41 T 28-03-2018 DDI_RS07980 c3b1c7d56b57bef69614bd721cbe4b57 319 SUPERFAMILY SSF161098 31 310 4.21E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07980 c3b1c7d56b57bef69614bd721cbe4b57 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 305 1.6E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05500 a83925c99bae8bf8873327fb7466edc0 303 PIRSF PIRSF005539 6 302 7.4E-133 T 28-03-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DDI_RS05500 a83925c99bae8bf8873327fb7466edc0 303 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 64 75 5.7E-11 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DDI_RS05500 a83925c99bae8bf8873327fb7466edc0 303 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 110 124 5.7E-11 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DDI_RS05500 a83925c99bae8bf8873327fb7466edc0 303 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 5.7E-11 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DDI_RS05500 a83925c99bae8bf8873327fb7466edc0 303 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 11 299 2.8E-81 T 28-03-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DDI_RS05500 a83925c99bae8bf8873327fb7466edc0 303 Gene3D G3DSA:3.40.50.1820 11 303 2.0E-59 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05500 a83925c99bae8bf8873327fb7466edc0 303 SUPERFAMILY SSF53474 17 299 9.83E-57 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05500 a83925c99bae8bf8873327fb7466edc0 303 Pfam PF00561 alpha/beta hydrolase fold 36 287 4.3E-26 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS15230 164df1523cad98016362a67ae6d74433 251 SMART SM00345 20 78 6.5E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15230 164df1523cad98016362a67ae6d74433 251 Pfam PF07729 FCD domain 88 210 1.3E-16 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS15230 164df1523cad98016362a67ae6d74433 251 SMART SM00895 88 211 3.0E-13 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS15230 164df1523cad98016362a67ae6d74433 251 SUPERFAMILY SSF46785 18 82 8.06E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15230 164df1523cad98016362a67ae6d74433 251 SUPERFAMILY SSF48008 83 215 2.88E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS15230 164df1523cad98016362a67ae6d74433 251 Gene3D G3DSA:1.10.10.10 4 79 3.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15230 164df1523cad98016362a67ae6d74433 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 78 2.8E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS15230 164df1523cad98016362a67ae6d74433 251 Gene3D G3DSA:1.20.120.530 80 217 1.0E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS21080 35ba338fabd4edec4f450e01adb9de7e 399 Pfam PF02441 Flavoprotein 1 168 7.6E-41 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DDI_RS21080 35ba338fabd4edec4f450e01adb9de7e 399 SUPERFAMILY SSF102645 177 392 6.41E-78 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DDI_RS21080 35ba338fabd4edec4f450e01adb9de7e 399 SUPERFAMILY SSF52507 1 169 5.49E-57 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DDI_RS21080 35ba338fabd4edec4f450e01adb9de7e 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 180 361 9.1E-73 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DDI_RS21080 35ba338fabd4edec4f450e01adb9de7e 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 1 387 2.8E-155 T 28-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 DDI_RS21080 35ba338fabd4edec4f450e01adb9de7e 399 Gene3D G3DSA:3.40.50.1950 1 176 6.5E-53 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DDI_RS21080 35ba338fabd4edec4f450e01adb9de7e 399 Gene3D G3DSA:3.40.50.10300 177 395 2.3E-68 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DDI_RS12685 494be78811bc5a51b6411d7513a2bfc5 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 147 26.566 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12685 494be78811bc5a51b6411d7513a2bfc5 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 3.0E-11 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS12685 494be78811bc5a51b6411d7513a2bfc5 180 Gene3D G3DSA:3.30.70.20 71 105 2.4E-14 T 28-03-2018 DDI_RS12685 494be78811bc5a51b6411d7513a2bfc5 180 Gene3D G3DSA:3.30.70.20 15 70 4.4E-7 T 28-03-2018 DDI_RS12685 494be78811bc5a51b6411d7513a2bfc5 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS12685 494be78811bc5a51b6411d7513a2bfc5 180 SUPERFAMILY SSF54862 33 159 1.76E-28 T 28-03-2018 DDI_RS12685 494be78811bc5a51b6411d7513a2bfc5 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 3.7E-48 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12685 494be78811bc5a51b6411d7513a2bfc5 180 Gene3D G3DSA:3.30.70.20 106 171 4.1E-7 T 28-03-2018 DDI_RS19485 99cd38c8842af6347d2f628960e6d8ab 271 Gene3D G3DSA:3.40.50.300 2 253 4.0E-34 T 28-03-2018 DDI_RS19485 99cd38c8842af6347d2f628960e6d8ab 271 SUPERFAMILY SSF52540 2 248 7.09E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19485 99cd38c8842af6347d2f628960e6d8ab 271 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 246 3.8E-50 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ DDI_RS19485 99cd38c8842af6347d2f628960e6d8ab 271 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 240 7.8E-36 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ DDI_RS19270 5fe60f2016fb9502da1dff7689bef840 439 Gene3D G3DSA:3.40.190.10 143 435 1.7E-44 T 28-03-2018 DDI_RS19270 5fe60f2016fb9502da1dff7689bef840 439 Pfam PF13416 Bacterial extracellular solute-binding protein 46 369 5.4E-43 T 28-03-2018 DDI_RS19270 5fe60f2016fb9502da1dff7689bef840 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 DDI_RS19270 5fe60f2016fb9502da1dff7689bef840 439 SUPERFAMILY SSF53850 27 427 8.98E-75 T 28-03-2018 DDI_RS08025 e863c4abb97a3c6a5bb604e9d5477b2c 249 SUPERFAMILY SSF52540 10 240 9.63E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08025 e863c4abb97a3c6a5bb604e9d5477b2c 249 Pfam PF00005 ABC transporter 27 177 8.2E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS08025 e863c4abb97a3c6a5bb604e9d5477b2c 249 SMART SM00382 34 225 5.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08025 e863c4abb97a3c6a5bb604e9d5477b2c 249 PIRSF PIRSF039085 7 249 4.4E-86 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS08025 e863c4abb97a3c6a5bb604e9d5477b2c 249 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS08025 e863c4abb97a3c6a5bb604e9d5477b2c 249 Gene3D G3DSA:3.40.50.300 6 249 1.7E-67 T 28-03-2018 DDI_RS08810 65e83662bedfdc26a5d5283d6a5964fe 374 Pfam PF08495 FIST N domain 33 224 1.5E-35 T 28-03-2018 IPR013702 FIST domain, N-terminal DDI_RS08810 65e83662bedfdc26a5d5283d6a5964fe 374 SMART SM00897 29 225 1.0E-44 T 28-03-2018 IPR013702 FIST domain, N-terminal DDI_RS08810 65e83662bedfdc26a5d5283d6a5964fe 374 SMART SM01204 226 356 8.1E-32 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDI_RS08810 65e83662bedfdc26a5d5283d6a5964fe 374 Pfam PF10442 FIST C domain 226 354 1.7E-14 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDI_RS10405 a021fcec5c0fccec2e94277ebf6585fb 225 Gene3D G3DSA:1.10.357.10 54 221 8.3E-31 T 28-03-2018 DDI_RS10405 a021fcec5c0fccec2e94277ebf6585fb 225 SUPERFAMILY SSF46689 6 80 1.39E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS10405 a021fcec5c0fccec2e94277ebf6585fb 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 5.4E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS10405 a021fcec5c0fccec2e94277ebf6585fb 225 SUPERFAMILY SSF48498 86 218 5.11E-30 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS10405 a021fcec5c0fccec2e94277ebf6585fb 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDI_RS10405 a021fcec5c0fccec2e94277ebf6585fb 225 Gene3D G3DSA:1.10.10.60 2 53 2.4E-14 T 28-03-2018 DDI_RS08150 59c5eed43f12403b56120ed634fb8158 309 SUPERFAMILY SSF53850 94 300 4.89E-22 T 28-03-2018 DDI_RS08150 59c5eed43f12403b56120ed634fb8158 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 9.5E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS08150 59c5eed43f12403b56120ed634fb8158 309 Gene3D G3DSA:3.40.190.10 91 271 8.2E-12 T 28-03-2018 DDI_RS08150 59c5eed43f12403b56120ed634fb8158 309 Gene3D G3DSA:1.10.10.10 1 88 2.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08150 59c5eed43f12403b56120ed634fb8158 309 Pfam PF03466 LysR substrate binding domain 93 297 3.7E-20 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS08150 59c5eed43f12403b56120ed634fb8158 309 SUPERFAMILY SSF46785 6 108 1.92E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15610 2c352455a8e20fa079a580ae673acb39 204 Pfam PF08239 Bacterial SH3 domain 37 82 3.2E-7 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type DDI_RS15610 2c352455a8e20fa079a580ae673acb39 204 Gene3D G3DSA:2.30.30.410 20 90 1.4E-6 T 28-03-2018 DDI_RS15610 2c352455a8e20fa079a580ae673acb39 204 SMART SM00287 23 87 2.1E-8 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type DDI_RS15610 2c352455a8e20fa079a580ae673acb39 204 PIRSF PIRSF006158 1 203 1.6E-64 T 28-03-2018 IPR016476 SH3 domain protein DDI_RS15610 2c352455a8e20fa079a580ae673acb39 204 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 202 9.6E-51 T 28-03-2018 IPR016476 SH3 domain protein DDI_RS15610 2c352455a8e20fa079a580ae673acb39 204 Gene3D G3DSA:1.20.5.50 91 168 5.7E-6 T 28-03-2018 DDI_RS10725 50bf7335b569adc697560186fc88fb1e 448 SUPERFAMILY SSF103473 11 432 3.79E-76 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS10725 50bf7335b569adc697560186fc88fb1e 448 Gene3D G3DSA:1.20.1250.20 14 217 5.4E-36 T 28-03-2018 DDI_RS10725 50bf7335b569adc697560186fc88fb1e 448 Gene3D G3DSA:1.20.1250.20 240 433 3.8E-24 T 28-03-2018 DDI_RS10725 50bf7335b569adc697560186fc88fb1e 448 Pfam PF07690 Major Facilitator Superfamily 30 343 1.4E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS10725 50bf7335b569adc697560186fc88fb1e 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDI_RS04130 d6a3beb1cfa14a2364807c320c031d4e 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 6.1E-16 T 28-03-2018 IPR003849 Preprotein translocase YajC DDI_RS04130 d6a3beb1cfa14a2364807c320c031d4e 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 6.1E-16 T 28-03-2018 IPR003849 Preprotein translocase YajC DDI_RS04130 d6a3beb1cfa14a2364807c320c031d4e 111 Pfam PF02699 Preprotein translocase subunit 24 100 1.1E-25 T 28-03-2018 IPR003849 Preprotein translocase YajC DDI_RS04130 d6a3beb1cfa14a2364807c320c031d4e 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 103 4.0E-33 T 28-03-2018 IPR003849 Preprotein translocase YajC DDI_RS04130 d6a3beb1cfa14a2364807c320c031d4e 111 SMART SM01323 20 103 1.6E-35 T 28-03-2018 IPR003849 Preprotein translocase YajC DDI_RS03405 89edf192333471168c2703aea331ae65 101 SUPERFAMILY SSF50118 1 101 7.85E-29 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor DDI_RS03405 89edf192333471168c2703aea331ae65 101 Pfam PF01845 CcdB protein 2 100 1.8E-28 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 DDI_RS03405 89edf192333471168c2703aea331ae65 101 Gene3D G3DSA:2.30.30.110 2 100 6.9E-20 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor DDI_RS03405 89edf192333471168c2703aea331ae65 101 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 9 100 2.0E-27 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 DDI_RS01010 57f344b4a7728d05aa413047b17777ef 355 Gene3D G3DSA:1.10.3470.10 25 325 2.3E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS01010 57f344b4a7728d05aa413047b17777ef 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 320 2.6E-43 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS19065 61120cef2b4d0d24c7d604ef8978e062 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 381 6.6E-140 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS19065 61120cef2b4d0d24c7d604ef8978e062 386 SUPERFAMILY SSF53383 5 382 1.14E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS19065 61120cef2b4d0d24c7d604ef8978e062 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS19065 61120cef2b4d0d24c7d604ef8978e062 386 Gene3D G3DSA:3.40.640.10 1 247 4.5E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS19065 61120cef2b4d0d24c7d604ef8978e062 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 4.3E-205 T 28-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 DDI_RS19065 61120cef2b4d0d24c7d604ef8978e062 386 PIRSF PIRSF001434 1 384 1.5E-132 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS19065 61120cef2b4d0d24c7d604ef8978e062 386 Gene3D G3DSA:3.90.1150.10 248 386 7.7E-49 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS02380 98986726db2dd17bbf10f258e6d396c8 441 Pfam PF00083 Sugar (and other) transporter 24 231 2.9E-24 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DDI_RS02380 98986726db2dd17bbf10f258e6d396c8 441 Pfam PF07690 Major Facilitator Superfamily 285 435 6.4E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS02380 98986726db2dd17bbf10f258e6d396c8 441 Gene3D G3DSA:1.20.1250.20 20 232 1.4E-24 T 28-03-2018 DDI_RS02380 98986726db2dd17bbf10f258e6d396c8 441 Gene3D G3DSA:1.20.1250.20 233 441 1.3E-20 T 28-03-2018 DDI_RS02380 98986726db2dd17bbf10f258e6d396c8 441 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 31 425 2.6E-148 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 DDI_RS02380 98986726db2dd17bbf10f258e6d396c8 441 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDI_RS02380 98986726db2dd17bbf10f258e6d396c8 441 SUPERFAMILY SSF103473 20 440 6.15E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS09975 623a8e3527af595245c69ea81bfe08c3 274 Pfam PF02540 NAD synthase 23 265 5.7E-74 T 28-03-2018 IPR022310 NAD/GMP synthase DDI_RS09975 623a8e3527af595245c69ea81bfe08c3 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 30.779 T 28-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 DDI_RS09975 623a8e3527af595245c69ea81bfe08c3 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 27 273 9.3E-79 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 DDI_RS09975 623a8e3527af595245c69ea81bfe08c3 274 SUPERFAMILY SSF52402 3 273 1.49E-83 T 28-03-2018 DDI_RS09975 623a8e3527af595245c69ea81bfe08c3 274 Gene3D G3DSA:3.40.50.620 2 274 2.7E-58 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS14215 df0208198308908313ef763b2044507e 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 28-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 DDI_RS14215 df0208198308908313ef763b2044507e 307 Pfam PF01380 SIS domain 126 207 2.2E-7 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS14215 df0208198308908313ef763b2044507e 307 Gene3D G3DSA:1.10.8.10 240 268 4.5E-9 T 28-03-2018 DDI_RS14215 df0208198308908313ef763b2044507e 307 Gene3D G3DSA:1.10.8.10 269 296 3.8E-4 T 28-03-2018 DDI_RS14215 df0208198308908313ef763b2044507e 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.046 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 DDI_RS14215 df0208198308908313ef763b2044507e 307 Gene3D G3DSA:3.40.50.10490 11 239 7.9E-54 T 28-03-2018 DDI_RS14215 df0208198308908313ef763b2044507e 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 5.7E-125 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 DDI_RS14215 df0208198308908313ef763b2044507e 307 SUPERFAMILY SSF53697 4 249 9.12E-76 T 28-03-2018 DDI_RS15925 77ccf2d5b1107bba32ac50b57ef6c0b8 446 Pfam PF02661 Fic/DOC family 182 291 4.5E-14 T 28-03-2018 IPR003812 Fido domain DDI_RS15925 77ccf2d5b1107bba32ac50b57ef6c0b8 446 SUPERFAMILY SSF140931 160 356 3.66E-29 T 28-03-2018 IPR003812 Fido domain DDI_RS15925 77ccf2d5b1107bba32ac50b57ef6c0b8 446 Gene3D G3DSA:1.10.10.10 369 443 0.0022 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS15925 77ccf2d5b1107bba32ac50b57ef6c0b8 446 Gene3D G3DSA:1.10.3290.10 95 362 1.3E-47 T 28-03-2018 IPR003812 Fido domain DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 SUPERFAMILY SSF46785 1 109 2.04E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.8E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 Pfam PF03466 LysR substrate binding domain 86 288 1.1E-42 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 Gene3D G3DSA:3.40.190.10 88 176 3.5E-20 T 28-03-2018 DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 Gene3D G3DSA:1.10.10.10 1 87 6.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 SUPERFAMILY SSF53850 88 291 2.9E-40 T 28-03-2018 DDI_RS21200 9e2f37d6315bb88f8c2d8ce5ea057b75 312 Gene3D G3DSA:3.40.190.10 177 258 7.1E-18 T 28-03-2018 DDI_RS03155 0496afa54e76e0bf3ab2768b7f419f4a 318 Gene3D G3DSA:1.20.1630.10 4 318 9.7E-48 T 28-03-2018 DDI_RS03155 0496afa54e76e0bf3ab2768b7f419f4a 318 Pfam PF03916 Polysulphide reductase, NrfD 4 318 1.6E-78 T 28-03-2018 IPR005614 NrfD family DDI_RS03155 0496afa54e76e0bf3ab2768b7f419f4a 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 4 318 2.4E-120 T 28-03-2018 IPR017566 NrfD DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Gene3D G3DSA:1.10.1420.10 266 407 3.5E-39 T 28-03-2018 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Pfam PF05190 MutS family domain IV 428 517 3.6E-28 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 SUPERFAMILY SSF52540 567 798 1.24E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 SUPERFAMILY SSF55271 6 116 1.57E-43 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Pfam PF01624 MutS domain I 11 122 5.6E-43 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 849 0.0 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 SMART SM00534 607 794 1.9E-122 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Gene3D G3DSA:3.40.1170.10 1 134 4.5E-48 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 SUPERFAMILY SSF48334 270 565 1.03E-90 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Pfam PF05192 MutS domain III 272 559 5.4E-40 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Gene3D G3DSA:3.40.50.300 567 814 3.9E-42 T 28-03-2018 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Gene3D G3DSA:3.30.420.110 135 265 6.0E-27 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Pfam PF05188 MutS domain II 131 256 2.5E-32 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 SMART SM00533 286 591 2.9E-102 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Pfam PF00488 MutS domain V 610 797 2.4E-88 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 PIRSF PIRSF037677 3 193 1.1E-29 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 PIRSF PIRSF037677 203 820 2.3E-125 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Gene3D G3DSA:1.10.1420.10 408 535 5.4E-29 T 28-03-2018 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 844 25.443 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DDI_RS03840 02bca87e90aa78f2a876786150d27890 852 SUPERFAMILY SSF53150 117 269 3.66E-42 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DDI_RS14820 f63594c680025c27861990270a105919 162 Hamap MF_01114 Regulatory protein RecX [recX]. 2 162 12.953 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 DDI_RS14820 f63594c680025c27861990270a105919 162 Gene3D G3DSA:1.10.10.10 112 161 4.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14820 f63594c680025c27861990270a105919 162 Gene3D G3DSA:1.10.10.10 1 65 1.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14820 f63594c680025c27861990270a105919 162 Gene3D G3DSA:1.10.10.10 66 110 4.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14820 f63594c680025c27861990270a105919 162 Pfam PF02631 RecX family 50 156 5.9E-28 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 DDI_RS01695 3e43ecb5d5e143829d6e8608550e3ae4 98 Pfam PF04899 MbeD/MobD like 5 69 6.2E-5 T 28-03-2018 IPR006983 MbeD/MobD-like DDI_RS18305 302a045d82d15a7365c9e8d7018f1cad 380 Pfam PF07690 Major Facilitator Superfamily 11 337 4.1E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS18305 302a045d82d15a7365c9e8d7018f1cad 380 SUPERFAMILY SSF103473 9 370 9.81E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS18305 302a045d82d15a7365c9e8d7018f1cad 380 Gene3D G3DSA:1.20.1250.20 186 377 1.1E-20 T 28-03-2018 DDI_RS18305 302a045d82d15a7365c9e8d7018f1cad 380 Gene3D G3DSA:1.20.1250.20 3 180 1.9E-9 T 28-03-2018 DDI_RS05570 b4f24a76f63bc97282351f1429fe0c17 296 SUPERFAMILY SSF48179 170 289 1.09E-21 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS05570 b4f24a76f63bc97282351f1429fe0c17 296 Gene3D G3DSA:1.10.1040.10 173 294 2.7E-20 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS05570 b4f24a76f63bc97282351f1429fe0c17 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 7 149 1.7E-25 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 DDI_RS05570 b4f24a76f63bc97282351f1429fe0c17 296 Gene3D G3DSA:3.40.50.720 6 172 7.7E-20 T 28-03-2018 DDI_RS05570 b4f24a76f63bc97282351f1429fe0c17 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 7 290 2.7E-43 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 DDI_RS05570 b4f24a76f63bc97282351f1429fe0c17 296 SUPERFAMILY SSF51735 7 115 5.23E-9 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05570 b4f24a76f63bc97282351f1429fe0c17 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 170 289 5.6E-18 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 368 2.2E-40 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 5.1E-61 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 Gene3D G3DSA:3.40.47.10 263 412 3.0E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 Gene3D G3DSA:3.40.47.10 6 260 2.1E-81 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 SUPERFAMILY SSF53901 215 411 1.56E-72 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 6.4E-193 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 SUPERFAMILY SSF53901 4 252 2.88E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 PIRSF PIRSF000447 1 412 1.3E-198 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DDI_RS11745 ef2b264c23c3b4f24d7a95b1d6e99593 412 SMART SM00825 Beta-ketoacyl synthase 6 412 2.6E-16 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS08505 66340298e0b77f7ec493cd3331789166 194 SUPERFAMILY SSF55729 12 186 2.8E-40 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS08505 66340298e0b77f7ec493cd3331789166 194 Gene3D G3DSA:3.40.630.30 1 194 6.2E-29 T 28-03-2018 DDI_RS08505 66340298e0b77f7ec493cd3331789166 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 6.0E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS13775 964eba692a1fed8656a3575529bc9bc1 417 SUPERFAMILY SSF53067 36 172 1.94E-12 T 28-03-2018 DDI_RS13775 964eba692a1fed8656a3575529bc9bc1 417 Pfam PF05134 Type II secretion system (T2SS), protein L 39 231 9.7E-17 T 28-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain DDI_RS01735 9c3ed60d2fe6aacf27af5b60642288ce 478 SUPERFAMILY SSF53720 23 447 6.02E-107 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS01735 9c3ed60d2fe6aacf27af5b60642288ce 478 PIRSF PIRSF036492 7 475 7.0E-145 T 28-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 DDI_RS01735 9c3ed60d2fe6aacf27af5b60642288ce 478 Gene3D G3DSA:3.40.309.10 239 424 8.8E-50 T 28-03-2018 DDI_RS01735 9c3ed60d2fe6aacf27af5b60642288ce 478 Gene3D G3DSA:3.40.605.10 3 238 1.0E-57 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS01735 9c3ed60d2fe6aacf27af5b60642288ce 478 Pfam PF00171 Aldehyde dehydrogenase family 31 441 3.4E-81 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS01735 9c3ed60d2fe6aacf27af5b60642288ce 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 219 226 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 DDI_RS01060 01f355cba78285a2bb2ac6dbef153206 287 SUPERFAMILY SSF52540 41 268 9.21E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01060 01f355cba78285a2bb2ac6dbef153206 287 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS01060 01f355cba78285a2bb2ac6dbef153206 287 Pfam PF00005 ABC transporter 48 197 3.1E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS01060 01f355cba78285a2bb2ac6dbef153206 287 Gene3D G3DSA:3.40.50.300 21 279 1.0E-76 T 28-03-2018 DDI_RS01060 01f355cba78285a2bb2ac6dbef153206 287 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 280 4.3E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS01060 01f355cba78285a2bb2ac6dbef153206 287 SMART SM00382 57 246 7.1E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS15625 0173aa638f5dda74927aea19fe6f07d5 120 SUPERFAMILY SSF55620 1 114 1.5E-36 T 28-03-2018 DDI_RS15625 0173aa638f5dda74927aea19fe6f07d5 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 2.7E-29 T 28-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DDI_RS15625 0173aa638f5dda74927aea19fe6f07d5 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 1.3E-38 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DDI_RS15625 0173aa638f5dda74927aea19fe6f07d5 120 Pfam PF02152 Dihydroneopterin aldolase 4 113 8.8E-31 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DDI_RS15625 0173aa638f5dda74927aea19fe6f07d5 120 SMART SM00905 4 114 2.5E-48 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DDI_RS15625 0173aa638f5dda74927aea19fe6f07d5 120 Gene3D G3DSA:3.30.1130.10 1 119 3.8E-34 T 28-03-2018 DDI_RS12805 f65a33c35817ebc993afe4bb60c2747c 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 9.6E-21 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS12805 f65a33c35817ebc993afe4bb60c2747c 229 SUPERFAMILY SSF161098 7 205 3.27E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12805 f65a33c35817ebc993afe4bb60c2747c 229 Gene3D G3DSA:1.10.3720.10 2 225 3.5E-38 T 28-03-2018 DDI_RS12805 f65a33c35817ebc993afe4bb60c2747c 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 220 7.0E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 Gene3D G3DSA:2.30.40.10 351 402 4.2E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 SUPERFAMILY SSF51338 365 402 2.09E-27 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 SUPERFAMILY SSF51338 5 64 2.09E-27 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 Gene3D G3DSA:3.20.20.140 78 350 2.2E-60 T 28-03-2018 DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 Gene3D G3DSA:2.30.40.10 6 77 6.3E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 Pfam PF01979 Amidohydrolase family 61 378 1.2E-17 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 SUPERFAMILY SSF51556 64 364 1.95E-87 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 Hamap MF_00372 Imidazolonepropionase [hutI]. 6 403 42.18 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS13425 1d21140227dcea7789e90b1a37e78223 404 TIGRFAM TIGR01224 hutI: imidazolonepropionase 25 401 1.8E-151 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 Pfam PF00765 Autoinducer synthase 9 188 1.1E-89 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 Gene3D G3DSA:3.40.630.30 1 211 3.8E-39 T 28-03-2018 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 28-03-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 8.4E-66 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 8.4E-66 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 8.4E-66 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 8.4E-66 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 8.4E-66 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 8.4E-66 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 8.4E-66 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 DDI_RS20850 b95cb2d1faa5921b7c0a31124b529e94 212 SUPERFAMILY SSF55729 1 209 8.85E-44 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS18135 cb2c6763631b804a0de34940990c3ed8 95 SUPERFAMILY SSF75169 1 95 1.37E-27 T 28-03-2018 IPR027396 DsrEFH-like DDI_RS18135 cb2c6763631b804a0de34940990c3ed8 95 Gene3D G3DSA:3.40.1260.10 1 93 9.0E-24 T 28-03-2018 DDI_RS18135 cb2c6763631b804a0de34940990c3ed8 95 Pfam PF04077 DsrH like protein 7 91 3.0E-26 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 DDI_RS18135 cb2c6763631b804a0de34940990c3ed8 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 1.5E-28 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 DDI_RS18135 cb2c6763631b804a0de34940990c3ed8 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 26.652 T 28-03-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 DDI_RS14735 fb2613fba3456bea1e6b89066dcdb6e4 316 SUPERFAMILY SSF53335 110 306 6.1E-20 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS14735 fb2613fba3456bea1e6b89066dcdb6e4 316 Gene3D G3DSA:3.40.50.150 71 311 1.3E-19 T 28-03-2018 DDI_RS14735 fb2613fba3456bea1e6b89066dcdb6e4 316 Pfam PF13649 Methyltransferase domain 147 229 4.7E-7 T 28-03-2018 DDI_RS00135 5ee6b6f81fad0b791e785ea2e83c9868 372 Pfam PF04085 rod shape-determining protein MreC 123 268 2.6E-36 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DDI_RS00135 5ee6b6f81fad0b791e785ea2e83c9868 372 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 277 5.5E-113 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DDI_RS10900 46fc59ed64e6a4232b44773f53b29c43 231 Gene3D G3DSA:3.40.50.10420 40 229 4.1E-38 T 28-03-2018 DDI_RS10900 46fc59ed64e6a4232b44773f53b29c43 231 Pfam PF02589 LUD domain 64 228 3.0E-28 T 28-03-2018 IPR003741 LUD domain DDI_RS10900 46fc59ed64e6a4232b44773f53b29c43 231 SUPERFAMILY SSF100950 42 229 1.76E-37 T 28-03-2018 DDI_RS12690 00eab52ce83e2321ebdc5a6c1a717d3b 324 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12690 00eab52ce83e2321ebdc5a6c1a717d3b 324 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12690 00eab52ce83e2321ebdc5a6c1a717d3b 324 Pfam PF00146 NADH dehydrogenase 18 316 2.8E-117 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12690 00eab52ce83e2321ebdc5a6c1a717d3b 324 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.6 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS17170 d7949858793b0054d6b3a9f6072dd09b 358 PIRSF PIRSF001359 13 358 2.4E-99 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDI_RS17170 d7949858793b0054d6b3a9f6072dd09b 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDI_RS17170 d7949858793b0054d6b3a9f6072dd09b 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDI_RS17170 d7949858793b0054d6b3a9f6072dd09b 358 SUPERFAMILY SSF51569 4 356 1.61E-131 T 28-03-2018 DDI_RS17170 d7949858793b0054d6b3a9f6072dd09b 358 Gene3D G3DSA:3.20.20.70 4 357 8.4E-103 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS17170 d7949858793b0054d6b3a9f6072dd09b 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 1.7E-186 T 28-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DDI_RS17170 d7949858793b0054d6b3a9f6072dd09b 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.3E-90 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDI_RS17170 d7949858793b0054d6b3a9f6072dd09b 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 1.6E-113 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 SUPERFAMILY SSF55874 260 426 7.2E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 SMART SM00387 315 425 2.3E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 Gene3D G3DSA:1.10.287.130 201 265 3.7E-11 T 28-03-2018 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 4.7E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 4.7E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 4.7E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 4.7E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 2.2E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 SUPERFAMILY SSF47384 194 271 1.53E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 SMART SM00304 158 210 7.3E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 422 1.9E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 Gene3D G3DSA:3.30.565.10 266 425 6.3E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS10870 15148e388ada69f2d003561d8c2e13a9 451 SMART SM00388 211 271 1.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 267 7.1E-92 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 153 166 8.9E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 126 143 8.9E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 8.9E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 SUPERFAMILY SSF69189 287 380 1.94E-24 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 SUPERFAMILY SSF56601 12 287 4.54E-79 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 Gene3D G3DSA:3.40.710.10 28 288 5.3E-48 T 28-03-2018 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 287 378 3.8E-24 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 Gene3D G3DSA:2.60.410.10 289 378 6.4E-20 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS07925 30f2eb2ac844356bb5c799f57a4c0c6d 402 SMART SM00936 287 378 1.5E-33 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 SUPERFAMILY SSF52833 5 181 9.49E-53 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 Pfam PF00255 Glutathione peroxidase 6 111 8.8E-39 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 Gene3D G3DSA:3.40.30.10 3 183 2.1E-43 T 28-03-2018 DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 183 54.699 T 28-03-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.3E-16 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.3E-16 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.3E-16 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DDI_RS11595 c35eb8710c284cab436fa593a81617b6 183 PIRSF PIRSF000303 1 183 7.1E-60 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DDI_RS11160 74fc205e2c880ae969bcb941bb7f1c19 539 PIRSF PIRSF002741 4 539 4.8E-110 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS11160 74fc205e2c880ae969bcb941bb7f1c19 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 460 1.1E-87 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS11160 74fc205e2c880ae969bcb941bb7f1c19 539 Gene3D G3DSA:3.90.76.10 53 173 8.4E-34 T 28-03-2018 DDI_RS11160 74fc205e2c880ae969bcb941bb7f1c19 539 Gene3D G3DSA:3.10.105.10 309 509 5.2E-60 T 28-03-2018 DDI_RS11160 74fc205e2c880ae969bcb941bb7f1c19 539 Gene3D G3DSA:3.40.190.10 174 308 8.4E-38 T 28-03-2018 DDI_RS11160 74fc205e2c880ae969bcb941bb7f1c19 539 SUPERFAMILY SSF53850 33 534 3.49E-145 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 Gene3D G3DSA:3.40.50.720 145 241 4.0E-17 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 SUPERFAMILY SSF46548 7 157 1.1E-40 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 Gene3D G3DSA:1.10.1060.10 2 144 3.2E-40 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 SUPERFAMILY SSF51971 145 401 5.06E-70 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 Gene3D G3DSA:3.50.50.60 402 472 1.5E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 Gene3D G3DSA:3.50.50.60 314 401 5.1E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 Gene3D G3DSA:3.50.50.60 242 313 1.1E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 2.4E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.1E-37 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.1E-37 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.1E-37 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.1E-37 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.1E-37 T 28-03-2018 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 7.3E-264 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 DDI_RS00350 088e0c5e8a3f022c55b6a08aa2b6a500 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.3E-37 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DDI_RS05750 9d2dd5864d8239a4d909955cc88d4f82 482 Gene3D G3DSA:3.40.50.300 43 294 8.7E-11 T 28-03-2018 DDI_RS05750 9d2dd5864d8239a4d909955cc88d4f82 482 SUPERFAMILY SSF52540 129 249 2.03E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05750 9d2dd5864d8239a4d909955cc88d4f82 482 Pfam PF13175 AAA ATPase domain 196 240 5.8E-8 T 28-03-2018 DDI_RS11490 1fd62e951fa34f31168bab8fdf3d39c5 335 Gene3D G3DSA:3.20.20.70 1 335 4.0E-79 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS11490 1fd62e951fa34f31168bab8fdf3d39c5 335 SUPERFAMILY SSF51395 1 333 1.69E-104 T 28-03-2018 DDI_RS11490 1fd62e951fa34f31168bab8fdf3d39c5 335 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 335 1.9E-156 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DDI_RS11490 1fd62e951fa34f31168bab8fdf3d39c5 335 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 291 311 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DDI_RS11490 1fd62e951fa34f31168bab8fdf3d39c5 335 Pfam PF01180 Dihydroorotate dehydrogenase 46 334 4.3E-91 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DDI_RS11490 1fd62e951fa34f31168bab8fdf3d39c5 335 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DDI_RS11490 1fd62e951fa34f31168bab8fdf3d39c5 335 PIRSF PIRSF000164 10 335 7.1E-96 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DDI_RS11490 1fd62e951fa34f31168bab8fdf3d39c5 335 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 50.996 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DDI_RS12750 d4a58ed4d35cebb2781bc1a54003fc96 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-87 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU DDI_RS12750 d4a58ed4d35cebb2781bc1a54003fc96 164 Gene3D G3DSA:1.10.3190.10 54 164 9.0E-39 T 28-03-2018 IPR023146 YfbU, alpha-helical bundle domain DDI_RS12750 d4a58ed4d35cebb2781bc1a54003fc96 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 37.168 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU DDI_RS12750 d4a58ed4d35cebb2781bc1a54003fc96 164 Pfam PF03887 YfbU domain 2 164 2.9E-66 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU DDI_RS12750 d4a58ed4d35cebb2781bc1a54003fc96 164 PIRSF PIRSF006272 1 164 2.0E-72 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU DDI_RS12750 d4a58ed4d35cebb2781bc1a54003fc96 164 Gene3D G3DSA:1.10.287.680 2 51 6.7E-27 T 28-03-2018 IPR023145 YfbU, helix-hairpin domain DDI_RS12750 d4a58ed4d35cebb2781bc1a54003fc96 164 SUPERFAMILY SSF116960 1 164 4.05E-66 T 28-03-2018 DDI_RS11950 9ec97df1dbe968abd3f5b3e3afd2cab6 393 Gene3D G3DSA:3.30.470.20 170 376 3.2E-11 T 28-03-2018 DDI_RS11950 9ec97df1dbe968abd3f5b3e3afd2cab6 393 SUPERFAMILY SSF56059 106 301 1.94E-28 T 28-03-2018 DDI_RS11950 9ec97df1dbe968abd3f5b3e3afd2cab6 393 Gene3D G3DSA:3.40.50.20 5 112 6.0E-9 T 28-03-2018 DDI_RS11950 9ec97df1dbe968abd3f5b3e3afd2cab6 393 Pfam PF07478 D-ala D-ala ligase C-terminus 130 184 1.8E-5 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS11950 9ec97df1dbe968abd3f5b3e3afd2cab6 393 Gene3D G3DSA:3.30.1490.20 113 169 1.4E-9 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 SMART SM00226 3 141 2.4E-53 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 Gene3D G3DSA:3.40.50.2300 2 144 4.3E-38 T 28-03-2018 DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 1.5E-37 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.2E-25 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 1.2E-25 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.2E-25 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 1.2E-25 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 1.2E-25 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DDI_RS05365 bde4f1e264a3437642a45ea083441753 144 SUPERFAMILY SSF52788 1 142 2.35E-40 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily DDI_RS04990 d01269aad62ac6a9700af154c62fb205 175 Pfam PF00258 Flavodoxin 6 160 8.6E-32 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDI_RS04990 d01269aad62ac6a9700af154c62fb205 175 PIRSF PIRSF038996 1 172 9.6E-71 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 DDI_RS04990 d01269aad62ac6a9700af154c62fb205 175 Gene3D G3DSA:3.40.50.360 4 170 8.9E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS04990 d01269aad62ac6a9700af154c62fb205 175 SUPERFAMILY SSF52218 4 170 7.69E-52 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS04990 d01269aad62ac6a9700af154c62fb205 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DDI_RS04990 d01269aad62ac6a9700af154c62fb205 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 6.2E-75 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 DDI_RS20075 e3c4b6f0643db49d81fdbdb58db6ff71 457 Gene3D G3DSA:3.40.50.980 2 146 7.3E-9 T 28-03-2018 DDI_RS20075 e3c4b6f0643db49d81fdbdb58db6ff71 457 Gene3D G3DSA:3.40.50.980 147 302 2.6E-18 T 28-03-2018 DDI_RS20075 e3c4b6f0643db49d81fdbdb58db6ff71 457 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS20075 e3c4b6f0643db49d81fdbdb58db6ff71 457 SUPERFAMILY SSF56801 29 455 1.96E-49 T 28-03-2018 DDI_RS20075 e3c4b6f0643db49d81fdbdb58db6ff71 457 Pfam PF00501 AMP-binding enzyme 125 307 1.8E-12 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS20075 e3c4b6f0643db49d81fdbdb58db6ff71 457 Gene3D G3DSA:3.30.300.30 349 456 1.3E-15 T 28-03-2018 DDI_RS16050 0297cc0271e51e2e32fa1a6dd596d103 115 SUPERFAMILY SSF160719 16 103 1.23E-21 T 28-03-2018 DDI_RS16050 0297cc0271e51e2e32fa1a6dd596d103 115 Pfam PF04965 Gene 25-like lysozyme 21 96 5.2E-10 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DDI_RS16050 0297cc0271e51e2e32fa1a6dd596d103 115 Gene3D G3DSA:3.10.450.40 8 113 1.2E-19 T 28-03-2018 DDI_RS11420 29577f213d38d8d7bbf883d78ba010a1 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 6.1E-42 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DDI_RS11420 29577f213d38d8d7bbf883d78ba010a1 140 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 44.68 T 28-03-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 DDI_RS11420 29577f213d38d8d7bbf883d78ba010a1 140 SUPERFAMILY SSF54637 1 133 5.48E-32 T 28-03-2018 IPR029069 HotDog domain DDI_RS11420 29577f213d38d8d7bbf883d78ba010a1 140 Gene3D G3DSA:3.10.129.10 1 140 8.3E-31 T 28-03-2018 DDI_RS11420 29577f213d38d8d7bbf883d78ba010a1 140 Pfam PF03061 Thioesterase superfamily 50 127 3.3E-16 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDI_RS03965 d39bdea9440c60e3f4d09824f8efcecd 241 Gene3D G3DSA:3.30.70.270 64 236 1.3E-47 T 28-03-2018 DDI_RS03965 d39bdea9440c60e3f4d09824f8efcecd 241 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 77 234 5.2E-39 T 28-03-2018 IPR000160 GGDEF domain DDI_RS03965 d39bdea9440c60e3f4d09824f8efcecd 241 SUPERFAMILY SSF55073 86 234 1.73E-38 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS03965 d39bdea9440c60e3f4d09824f8efcecd 241 Pfam PF00990 Diguanylate cyclase, GGDEF domain 81 231 6.8E-37 T 28-03-2018 IPR000160 GGDEF domain DDI_RS03965 d39bdea9440c60e3f4d09824f8efcecd 241 SMART SM00267 70 235 2.9E-53 T 28-03-2018 IPR000160 GGDEF domain DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.4E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.4E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.4E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 Gene3D G3DSA:3.40.50.720 5 266 2.2E-61 T 28-03-2018 DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 Pfam PF00106 short chain dehydrogenase 7 188 6.7E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 6.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 6.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 6.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS13815 6ea2f88c0e7afa12089703de9fbe97df 276 SUPERFAMILY SSF51735 6 260 8.28E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS04725 0b9d9b24d443a69ec294630e4db09e5b 189 Gene3D G3DSA:3.30.70.260 8 89 5.7E-11 T 28-03-2018 DDI_RS04725 0b9d9b24d443a69ec294630e4db09e5b 189 Pfam PF13740 ACT domain 7 82 2.1E-25 T 28-03-2018 DDI_RS04725 0b9d9b24d443a69ec294630e4db09e5b 189 PIRSF PIRSF028103 5 180 1.4E-62 T 28-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 DDI_RS04725 0b9d9b24d443a69ec294630e4db09e5b 189 SUPERFAMILY SSF55021 5 85 2.58E-16 T 28-03-2018 DDI_RS04725 0b9d9b24d443a69ec294630e4db09e5b 189 Gene3D G3DSA:3.30.70.260 93 189 1.2E-11 T 28-03-2018 DDI_RS04725 0b9d9b24d443a69ec294630e4db09e5b 189 SUPERFAMILY SSF55021 91 179 7.5E-17 T 28-03-2018 DDI_RS14165 968b44ab01723bacaa463ff8d00ca3e5 392 Gene3D G3DSA:2.160.20.10 103 392 1.5E-55 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS14165 968b44ab01723bacaa463ff8d00ca3e5 392 Gene3D G3DSA:2.160.20.10 33 102 1.6E-11 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS14165 968b44ab01723bacaa463ff8d00ca3e5 392 Pfam PF00544 Pectate lyase 84 313 4.2E-98 T 28-03-2018 IPR002022 Pectate lyase DDI_RS14165 968b44ab01723bacaa463ff8d00ca3e5 392 SMART SM00656 60 319 4.7E-152 T 28-03-2018 IPR002022 Pectate lyase DDI_RS14165 968b44ab01723bacaa463ff8d00ca3e5 392 SUPERFAMILY SSF51126 41 391 1.01E-82 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS13305 0f3b5339e54cd0d754b8278bf38524af 470 SUPERFAMILY SSF103473 23 445 6.54E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS13305 0f3b5339e54cd0d754b8278bf38524af 470 Pfam PF07690 Major Facilitator Superfamily 29 385 1.3E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS13305 0f3b5339e54cd0d754b8278bf38524af 470 Gene3D G3DSA:1.20.1250.20 240 453 5.7E-18 T 28-03-2018 DDI_RS13305 0f3b5339e54cd0d754b8278bf38524af 470 Gene3D G3DSA:1.20.1250.20 21 235 1.5E-21 T 28-03-2018 DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 SUPERFAMILY SSF53383 1 421 4.08E-137 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 2.5E-184 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 Gene3D G3DSA:3.90.1150.10 190 262 7.2E-5 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 PIRSF PIRSF000521 30 423 2.4E-30 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 51.426 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 Pfam PF00202 Aminotransferase class-III 28 421 2.1E-129 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 Gene3D G3DSA:3.90.1150.10 2 170 4.5E-45 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS07135 76f5825b7e9b9edf902c6d095d1b8825 427 Gene3D G3DSA:3.90.1150.10 263 423 3.2E-47 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS15245 5502285452445fcdb87d3aff78417324 400 Gene3D G3DSA:3.10.580.10 272 400 2.9E-14 T 28-03-2018 DDI_RS15245 5502285452445fcdb87d3aff78417324 400 Pfam PF00571 CBS domain 347 393 4.6E-6 T 28-03-2018 IPR000644 CBS domain DDI_RS15245 5502285452445fcdb87d3aff78417324 400 SMART SM00382 53 250 2.5E-21 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS15245 5502285452445fcdb87d3aff78417324 400 SUPERFAMILY SSF52540 43 271 8.8E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15245 5502285452445fcdb87d3aff78417324 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS15245 5502285452445fcdb87d3aff78417324 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 1.4E-170 T 28-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 DDI_RS15245 5502285452445fcdb87d3aff78417324 400 SUPERFAMILY SSF54631 275 394 1.63E-13 T 28-03-2018 DDI_RS15245 5502285452445fcdb87d3aff78417324 400 Gene3D G3DSA:3.40.50.300 2 271 1.5E-73 T 28-03-2018 DDI_RS15245 5502285452445fcdb87d3aff78417324 400 Pfam PF00005 ABC transporter 45 192 1.4E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 SUPERFAMILY SSF56655 1 225 4.19E-57 T 28-03-2018 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 Pfam PF00459 Inositol monophosphatase family 9 239 4.1E-47 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 Gene3D G3DSA:3.30.540.10 1 142 1.9E-39 T 28-03-2018 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 2.2E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.2E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 2.2E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 2.2E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 2.2E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site DDI_RS09465 8157dd07092d60515d6255cb3b84020a 254 Gene3D G3DSA:3.40.190.80 143 240 5.7E-11 T 28-03-2018 DDI_RS20745 49259cc613d1b56c09021e5ecf6e3caf 235 SUPERFAMILY SSF52540 4 231 1.04E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20745 49259cc613d1b56c09021e5ecf6e3caf 235 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS20745 49259cc613d1b56c09021e5ecf6e3caf 235 Pfam PF00005 ABC transporter 24 173 7.0E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20745 49259cc613d1b56c09021e5ecf6e3caf 235 Gene3D G3DSA:3.40.50.300 1 234 9.5E-70 T 28-03-2018 DDI_RS20745 49259cc613d1b56c09021e5ecf6e3caf 235 SMART SM00382 33 221 2.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08605 492ede9bc31b5af5c578802401c9e0f8 458 Gene3D G3DSA:3.40.50.300 208 447 1.0E-34 T 28-03-2018 DDI_RS08605 492ede9bc31b5af5c578802401c9e0f8 458 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 244 367 3.5E-26 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS08605 492ede9bc31b5af5c578802401c9e0f8 458 SMART SM00382 239 371 4.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08605 492ede9bc31b5af5c578802401c9e0f8 458 SUPERFAMILY SSF52540 197 435 2.96E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20090 b9be37803580b652d4eda70a013867de 142 PIRSF PIRSF003230 2 139 6.4E-22 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DDI_RS20090 b9be37803580b652d4eda70a013867de 142 Pfam PF13279 Thioesterase-like superfamily 17 123 8.8E-12 T 28-03-2018 DDI_RS20090 b9be37803580b652d4eda70a013867de 142 SUPERFAMILY SSF54637 9 135 5.6E-31 T 28-03-2018 IPR029069 HotDog domain DDI_RS20090 b9be37803580b652d4eda70a013867de 142 Gene3D G3DSA:3.10.129.10 4 136 1.4E-26 T 28-03-2018 DDI_RS10025 2ef0ccd652b8a2fe6e745bcc32bd8378 96 Pfam PF13974 YebO-like protein 12 96 3.3E-29 T 28-03-2018 IPR025594 YebO-like protein DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 SUPERFAMILY SSF54913 1 112 4.13E-42 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 Gene3D G3DSA:3.30.70.120 1 108 7.6E-46 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 PIRSF PIRSF039144 1 112 6.5E-53 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 SMART SM00938 4 105 5.9E-61 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS04335 d574b7baaec6a9b609118c15079b5824 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DDI_RS12965 d36a9077f4f7072af5e1e46d690bfa36 161 SMART SM00855 2 114 9.2E-5 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDI_RS12965 d36a9077f4f7072af5e1e46d690bfa36 161 Gene3D G3DSA:3.40.50.1240 1 153 1.0E-20 T 28-03-2018 IPR029033 Histidine phosphatase superfamily DDI_RS12965 d36a9077f4f7072af5e1e46d690bfa36 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 70 7.9E-8 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDI_RS12965 d36a9077f4f7072af5e1e46d690bfa36 161 PIRSF PIRSF000709 1 92 0.0086 T 28-03-2018 DDI_RS12965 d36a9077f4f7072af5e1e46d690bfa36 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 4.3E-46 T 28-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 DDI_RS12965 d36a9077f4f7072af5e1e46d690bfa36 161 SUPERFAMILY SSF53254 1 141 1.73E-18 T 28-03-2018 IPR029033 Histidine phosphatase superfamily DDI_RS19395 e190f66e38c3f74689aa6e8a84d6c7d9 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.373 T 28-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 DDI_RS19395 e190f66e38c3f74689aa6e8a84d6c7d9 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 28-03-2018 IPR001455 TusA-like domain DDI_RS19395 e190f66e38c3f74689aa6e8a84d6c7d9 81 Pfam PF01206 Sulfurtransferase TusA 11 79 1.7E-24 T 28-03-2018 IPR001455 TusA-like domain DDI_RS19395 e190f66e38c3f74689aa6e8a84d6c7d9 81 Gene3D G3DSA:3.30.110.40 4 81 3.6E-28 T 28-03-2018 IPR001455 TusA-like domain DDI_RS19395 e190f66e38c3f74689aa6e8a84d6c7d9 81 SUPERFAMILY SSF64307 4 80 2.88E-25 T 28-03-2018 IPR001455 TusA-like domain DDI_RS03220 fe443362471afc23e86f25d9f4f35e3e 318 Gene3D G3DSA:1.10.10.10 3 87 2.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03220 fe443362471afc23e86f25d9f4f35e3e 318 SUPERFAMILY SSF46785 4 111 5.53E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03220 fe443362471afc23e86f25d9f4f35e3e 318 Gene3D G3DSA:3.40.190.10 89 177 2.1E-15 T 28-03-2018 DDI_RS03220 fe443362471afc23e86f25d9f4f35e3e 318 Pfam PF03466 LysR substrate binding domain 90 293 3.2E-44 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS03220 fe443362471afc23e86f25d9f4f35e3e 318 Gene3D G3DSA:3.40.190.10 178 264 6.9E-24 T 28-03-2018 DDI_RS03220 fe443362471afc23e86f25d9f4f35e3e 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03220 fe443362471afc23e86f25d9f4f35e3e 318 SUPERFAMILY SSF53850 90 295 1.32E-46 T 28-03-2018 DDI_RS13500 59fac949fbedd844d76c818647b0182f 271 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 25 271 2.2E-116 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DDI_RS13500 59fac949fbedd844d76c818647b0182f 271 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS13500 59fac949fbedd844d76c818647b0182f 271 SUPERFAMILY SSF52540 24 257 2.78E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13500 59fac949fbedd844d76c818647b0182f 271 SMART SM00382 49 252 3.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS13500 59fac949fbedd844d76c818647b0182f 271 Gene3D G3DSA:3.40.50.300 11 269 6.8E-60 T 28-03-2018 DDI_RS13500 59fac949fbedd844d76c818647b0182f 271 Pfam PF00005 ABC transporter 40 196 4.3E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS10200 25f2fcf4c931d07d273ce419b32f7463 74 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 70 8.2E-23 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 DDI_RS10200 25f2fcf4c931d07d273ce419b32f7463 74 Gene3D G3DSA:2.10.260.10 38 69 1.3E-4 T 28-03-2018 DDI_RS14990 c8440f04360049ae6b7e899b1af05f40 378 Pfam PF04914 DltD protein 60 377 4.1E-19 T 28-03-2018 IPR006998 DltD DDI_RS14990 c8440f04360049ae6b7e899b1af05f40 378 SUPERFAMILY SSF52266 287 376 7.69E-6 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS14990 c8440f04360049ae6b7e899b1af05f40 378 Gene3D G3DSA:3.40.50.1110 48 378 7.4E-10 T 28-03-2018 DDI_RS15370 54aa0ac80e2ccdbed0470fab5c536930 271 PIRSF PIRSF002854 1 271 2.2E-104 T 28-03-2018 IPR004872 Lipoprotein NlpA family DDI_RS15370 54aa0ac80e2ccdbed0470fab5c536930 271 Gene3D G3DSA:3.40.190.10 126 271 1.2E-48 T 28-03-2018 DDI_RS15370 54aa0ac80e2ccdbed0470fab5c536930 271 Gene3D G3DSA:3.40.190.10 32 125 1.6E-21 T 28-03-2018 DDI_RS15370 54aa0ac80e2ccdbed0470fab5c536930 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 1.1E-141 T 28-03-2018 IPR004872 Lipoprotein NlpA family DDI_RS15370 54aa0ac80e2ccdbed0470fab5c536930 271 SUPERFAMILY SSF53850 33 271 5.44E-82 T 28-03-2018 DDI_RS15370 54aa0ac80e2ccdbed0470fab5c536930 271 Pfam PF03180 NLPA lipoprotein 33 271 2.2E-98 T 28-03-2018 IPR004872 Lipoprotein NlpA family DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 5.6E-30 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 4.4E-53 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 2.2E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 67.433 T 28-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.8E-27 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.8E-27 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.8E-27 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.8E-27 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.8E-27 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 Gene3D G3DSA:3.50.50.60 3 164 8.8E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 SUPERFAMILY SSF51905 5 322 2.16E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 PIRSF PIRSF000350 1 463 3.7E-68 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 SUPERFAMILY SSF55424 345 463 1.72E-30 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 Gene3D G3DSA:3.40.50.720 165 339 2.0E-27 T 28-03-2018 DDI_RS19040 f369dc72eeb8545513e6aa877889e9d0 466 Gene3D G3DSA:3.30.390.30 340 463 5.9E-34 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 DDI_RS03685 60f02cee8464c32a702b7d1477c53392 182 Pfam PF07348 Syd protein (SUKH-2) 7 179 5.7E-68 T 28-03-2018 IPR009948 Syd GO:0009898 DDI_RS03685 60f02cee8464c32a702b7d1477c53392 182 Hamap MF_01104 Protein Syd [syd]. 3 181 34.756 T 28-03-2018 IPR009948 Syd GO:0009898 DDI_RS00395 8b43569b96dd9571e812f65e58c137e4 131 SUPERFAMILY SSF52980 19 125 1.84E-19 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDI_RS00395 8b43569b96dd9571e812f65e58c137e4 131 Gene3D G3DSA:3.40.1350.10 22 131 4.4E-33 T 28-03-2018 DDI_RS00395 8b43569b96dd9571e812f65e58c137e4 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 17 127 4.1E-39 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 DDI_RS00395 8b43569b96dd9571e812f65e58c137e4 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 22.357 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 DDI_RS00395 8b43569b96dd9571e812f65e58c137e4 131 Pfam PF02021 Uncharacterised protein family UPF0102 23 115 4.2E-24 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 DDI_RS11105 7b1803f8cede11f1f6207f6a0567c016 305 Gene3D G3DSA:3.20.20.100 1 304 1.5E-73 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS11105 7b1803f8cede11f1f6207f6a0567c016 305 PRINTS PR00069 Aldo-keto reductase signature 101 119 4.2E-7 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS11105 7b1803f8cede11f1f6207f6a0567c016 305 PRINTS PR00069 Aldo-keto reductase signature 132 149 4.2E-7 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS11105 7b1803f8cede11f1f6207f6a0567c016 305 PRINTS PR00069 Aldo-keto reductase signature 38 62 4.2E-7 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS11105 7b1803f8cede11f1f6207f6a0567c016 305 SUPERFAMILY SSF51430 1 300 5.11E-74 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS11105 7b1803f8cede11f1f6207f6a0567c016 305 Pfam PF00248 Aldo/keto reductase family 15 297 6.6E-56 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS20435 fef02a9f62ac129d2c0a5d5dc9e8a943 145 Pfam PF08448 PAS fold 10 121 7.0E-12 T 28-03-2018 IPR013656 PAS fold-4 DDI_RS20435 fef02a9f62ac129d2c0a5d5dc9e8a943 145 Gene3D G3DSA:3.30.450.20 3 142 6.3E-26 T 28-03-2018 DDI_RS20435 fef02a9f62ac129d2c0a5d5dc9e8a943 145 SMART SM00091 3 69 2.6E-12 T 28-03-2018 IPR000014 PAS domain DDI_RS20435 fef02a9f62ac129d2c0a5d5dc9e8a943 145 SUPERFAMILY SSF55785 14 130 5.8E-25 T 28-03-2018 IPR000014 PAS domain DDI_RS20435 fef02a9f62ac129d2c0a5d5dc9e8a943 145 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 127 9.9E-19 T 28-03-2018 IPR000014 PAS domain DDI_RS10545 445d02c4496af7ab293d9333a3186b1e 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 374 1.3E-124 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDI_RS10545 445d02c4496af7ab293d9333a3186b1e 382 Gene3D G3DSA:3.40.50.1970 8 182 8.6E-47 T 28-03-2018 DDI_RS10545 445d02c4496af7ab293d9333a3186b1e 382 Gene3D G3DSA:1.20.1090.10 183 382 3.6E-69 T 28-03-2018 DDI_RS10545 445d02c4496af7ab293d9333a3186b1e 382 SUPERFAMILY SSF56796 5 381 6.67E-132 T 28-03-2018 DDI_RS10545 445d02c4496af7ab293d9333a3186b1e 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS10545 445d02c4496af7ab293d9333a3186b1e 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS05020 85812dc840e333d957b02fb855d85c5b 142 SUPERFAMILY SSF103481 38 141 4.97E-13 T 28-03-2018 DDI_RS05020 85812dc840e333d957b02fb855d85c5b 142 Pfam PF00892 EamA-like transporter family 3 140 9.0E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS00960 06a4c3e9d29cc4d0c75c68f8732c155c 437 Pfam PF15515 MvaI/BcnI restriction endonuclease family 187 425 5.8E-48 T 28-03-2018 IPR029127 MvaI/BcnI restriction endonuclease DDI_RS00735 29ded3d297e7da99b81564c2911c188a 160 SUPERFAMILY SSF55729 13 142 9.26E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS00735 29ded3d297e7da99b81564c2911c188a 160 Pfam PF00583 Acetyltransferase (GNAT) family 50 138 5.4E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS00735 29ded3d297e7da99b81564c2911c188a 160 Gene3D G3DSA:3.40.630.30 10 159 5.6E-21 T 28-03-2018 DDI_RS11215 32ce923b24a6728b3d8903dc78cbcc3e 135 SUPERFAMILY SSF54593 1 128 4.97E-36 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS11215 32ce923b24a6728b3d8903dc78cbcc3e 135 Gene3D G3DSA:3.10.180.10 1 134 3.6E-38 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS11215 32ce923b24a6728b3d8903dc78cbcc3e 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 133 1.5E-67 T 28-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DDI_RS11215 32ce923b24a6728b3d8903dc78cbcc3e 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.9E-26 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DDI_RS11215 32ce923b24a6728b3d8903dc78cbcc3e 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DDI_RS11215 32ce923b24a6728b3d8903dc78cbcc3e 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DDI_RS15255 16b49d547248ba914fbedaee9aeae5e5 332 Gene3D G3DSA:3.40.190.10 23 157 3.3E-15 T 28-03-2018 DDI_RS15255 16b49d547248ba914fbedaee9aeae5e5 332 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 314 2.2E-55 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 DDI_RS15255 16b49d547248ba914fbedaee9aeae5e5 332 SUPERFAMILY SSF53850 25 330 3.53E-93 T 28-03-2018 DDI_RS15255 16b49d547248ba914fbedaee9aeae5e5 332 Gene3D G3DSA:3.40.190.10 158 327 1.5E-33 T 28-03-2018 DDI_RS16785 e67301caa6309af54d09b45f8883341f 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.2E-66 T 28-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDI_RS16785 e67301caa6309af54d09b45f8883341f 163 Gene3D G3DSA:3.30.70.260 2 87 8.4E-24 T 28-03-2018 DDI_RS16785 e67301caa6309af54d09b45f8883341f 163 SUPERFAMILY SSF55021 79 162 6.01E-25 T 28-03-2018 DDI_RS16785 e67301caa6309af54d09b45f8883341f 163 Pfam PF13710 ACT domain 12 73 2.8E-15 T 28-03-2018 DDI_RS16785 e67301caa6309af54d09b45f8883341f 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 5.0E-37 T 28-03-2018 DDI_RS16785 e67301caa6309af54d09b45f8883341f 163 SUPERFAMILY SSF55021 2 74 1.93E-22 T 28-03-2018 DDI_RS16785 e67301caa6309af54d09b45f8883341f 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 4.5E-23 T 28-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDI_RS16785 e67301caa6309af54d09b45f8883341f 163 Gene3D G3DSA:3.30.70.1150 88 160 1.8E-24 T 28-03-2018 DDI_RS02045 5e7917cc61adcd59a3413725eb441cd3 93 Gene3D G3DSA:1.10.260.40 1 73 6.3E-18 T 28-03-2018 DDI_RS02045 5e7917cc61adcd59a3413725eb441cd3 93 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 5.4E-39 T 28-03-2018 DDI_RS02045 5e7917cc61adcd59a3413725eb441cd3 93 SUPERFAMILY SSF47413 2 72 6.0E-32 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS18825 1664fb4206f1eb373dd99efb47d52493 376 Gene3D G3DSA:3.40.640.10 1 242 2.3E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS18825 1664fb4206f1eb373dd99efb47d52493 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 370 5.3E-90 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DDI_RS18825 1664fb4206f1eb373dd99efb47d52493 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 84.413 T 28-03-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 DDI_RS18825 1664fb4206f1eb373dd99efb47d52493 376 SUPERFAMILY SSF53383 2 375 2.96E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS18825 1664fb4206f1eb373dd99efb47d52493 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 3.5E-199 T 28-03-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 DDI_RS18825 1664fb4206f1eb373dd99efb47d52493 376 Gene3D G3DSA:3.90.1150.10 243 376 1.7E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS18825 1664fb4206f1eb373dd99efb47d52493 376 PIRSF PIRSF000390 1 376 9.9E-114 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 SUPERFAMILY SSF52540 6 219 2.43E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.4E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.373 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 Gene3D G3DSA:2.40.30.10 300 393 2.5E-32 T 28-03-2018 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 SUPERFAMILY SSF50447 205 301 3.73E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 Gene3D G3DSA:3.40.50.300 75 203 2.5E-32 T 28-03-2018 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 SUPERFAMILY SSF50465 298 393 3.45E-35 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.8E-239 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 Gene3D G3DSA:3.40.50.300 2 74 5.5E-11 T 28-03-2018 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 Gene3D G3DSA:2.40.30.10 206 299 3.7E-32 T 28-03-2018 DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.2E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DDI_RS21420 f0fe5ad7f9291d43f49886f02d8823e1 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.1E-59 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS19700 aa21b0902a5ad5462f2c5c794fab238c 426 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 32 46 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site DDI_RS19700 aa21b0902a5ad5462f2c5c794fab238c 426 SUPERFAMILY SSF53254 26 413 7.58E-64 T 28-03-2018 IPR029033 Histidine phosphatase superfamily DDI_RS19700 aa21b0902a5ad5462f2c5c794fab238c 426 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 32 362 3.3E-28 T 28-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 DDI_RS19700 aa21b0902a5ad5462f2c5c794fab238c 426 Gene3D G3DSA:3.40.50.1240 23 421 2.7E-48 T 28-03-2018 IPR029033 Histidine phosphatase superfamily DDI_RS06025 16aa670214ca2f9630fda392f3ea840d 262 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06025 16aa670214ca2f9630fda392f3ea840d 262 SUPERFAMILY SSF52540 14 259 6.2E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06025 16aa670214ca2f9630fda392f3ea840d 262 Gene3D G3DSA:3.40.50.300 13 261 5.0E-63 T 28-03-2018 DDI_RS06025 16aa670214ca2f9630fda392f3ea840d 262 PIRSF PIRSF037116 6 262 1.3E-137 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK DDI_RS06025 16aa670214ca2f9630fda392f3ea840d 262 SMART SM00382 41 234 7.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06025 16aa670214ca2f9630fda392f3ea840d 262 Pfam PF00005 ABC transporter 33 184 3.4E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06025 16aa670214ca2f9630fda392f3ea840d 262 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 15 261 6.7E-118 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK DDI_RS14115 e0c1dcb7fbf78833e19c9e8f9cdd7bd3 360 SUPERFAMILY SSF81345 23 356 1.83E-79 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS14115 e0c1dcb7fbf78833e19c9e8f9cdd7bd3 360 Gene3D G3DSA:1.10.3470.10 26 360 1.8E-72 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS14115 e0c1dcb7fbf78833e19c9e8f9cdd7bd3 360 Pfam PF01032 FecCD transport family 41 355 2.4E-85 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 DDI_RS11500 6c669ca639fe18aae7731d9b50fb1093 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 314 4.2E-81 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DDI_RS11500 6c669ca639fe18aae7731d9b50fb1093 319 SMART SM00062 32 253 1.5E-30 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS11500 6c669ca639fe18aae7731d9b50fb1093 319 SUPERFAMILY SSF53850 32 310 2.72E-50 T 28-03-2018 DDI_RS11500 6c669ca639fe18aae7731d9b50fb1093 319 Gene3D G3DSA:3.40.190.10 27 132 9.1E-18 T 28-03-2018 DDI_RS11500 6c669ca639fe18aae7731d9b50fb1093 319 Pfam PF09084 NMT1/THI5 like 69 233 1.6E-12 T 28-03-2018 IPR015168 SsuA/THI5-like DDI_RS11500 6c669ca639fe18aae7731d9b50fb1093 319 Gene3D G3DSA:3.40.190.10 133 314 1.4E-31 T 28-03-2018 DDI_RS10965 bceecc06cc910f3717e5f156fb4cf0e1 328 Gene3D G3DSA:3.30.460.20 1 139 6.2E-17 T 28-03-2018 DDI_RS10965 bceecc06cc910f3717e5f156fb4cf0e1 328 SUPERFAMILY SSF143865 41 259 2.09E-45 T 28-03-2018 DDI_RS10965 bceecc06cc910f3717e5f156fb4cf0e1 328 SUPERFAMILY SSF144083 264 325 6.67E-14 T 28-03-2018 DDI_RS10965 bceecc06cc910f3717e5f156fb4cf0e1 328 Gene3D G3DSA:1.20.58.340 140 262 1.1E-16 T 28-03-2018 DDI_RS10965 bceecc06cc910f3717e5f156fb4cf0e1 328 Pfam PF01544 CorA-like Mg2+ transporter protein 42 324 2.6E-62 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DDI_RS10965 bceecc06cc910f3717e5f156fb4cf0e1 328 Gene3D G3DSA:1.20.58.340 263 328 1.1E-16 T 28-03-2018 DDI_RS07790 d90a563a247f376573aa068a89e8042d 79 Gene3D G3DSA:1.10.1200.10 3 78 3.9E-8 T 28-03-2018 DDI_RS07790 d90a563a247f376573aa068a89e8042d 79 SUPERFAMILY SSF47336 7 75 3.93E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS07790 d90a563a247f376573aa068a89e8042d 79 Pfam PF00550 Phosphopantetheine attachment site 21 70 1.8E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS20505 07c3c73ef914d3ea584f44fea4466ec0 547 TIGRFAM TIGR04028 SBP_KPN_01854: ABC transporter substrate binding protein, KPN_01854 family 40 546 5.3E-264 T 28-03-2018 IPR023920 ABC transporter, substrate-binding protein, KPN01854 DDI_RS20505 07c3c73ef914d3ea584f44fea4466ec0 547 Gene3D G3DSA:3.40.190.10 162 305 8.6E-26 T 28-03-2018 DDI_RS20505 07c3c73ef914d3ea584f44fea4466ec0 547 Gene3D G3DSA:3.10.105.10 306 516 2.6E-39 T 28-03-2018 DDI_RS20505 07c3c73ef914d3ea584f44fea4466ec0 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 423 3.3E-71 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS20505 07c3c73ef914d3ea584f44fea4466ec0 547 PIRSF PIRSF002741 11 547 3.0E-73 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS20505 07c3c73ef914d3ea584f44fea4466ec0 547 SUPERFAMILY SSF53850 35 546 5.43E-103 T 28-03-2018 DDI_RS20505 07c3c73ef914d3ea584f44fea4466ec0 547 Gene3D G3DSA:3.90.76.10 61 161 3.0E-26 T 28-03-2018 DDI_RS10335 43db55ca366f1428517481195786d18b 389 SUPERFAMILY SSF140591 49 269 9.02E-47 T 28-03-2018 DDI_RS10335 43db55ca366f1428517481195786d18b 389 SUPERFAMILY SSF140591 308 375 3.02E-5 T 28-03-2018 DDI_RS10335 43db55ca366f1428517481195786d18b 389 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 43 282 5.6E-44 T 28-03-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 DDI_RS10335 43db55ca366f1428517481195786d18b 389 Pfam PF07201 HrpJ-like domain 56 223 2.4E-44 T 28-03-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 DDI_RS10335 43db55ca366f1428517481195786d18b 389 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 310 368 8.5E-10 T 28-03-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related DDI_RS10335 43db55ca366f1428517481195786d18b 389 Pfam PF09059 TyeA 295 362 9.0E-5 T 28-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA DDI_RS06250 951949d945ed4ca4f9ed770d78f1eb27 268 Pfam PF00112 Papain family cysteine protease 45 246 2.2E-11 T 28-03-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 DDI_RS06250 951949d945ed4ca4f9ed770d78f1eb27 268 Gene3D G3DSA:3.90.70.10 1 268 8.9E-37 T 28-03-2018 DDI_RS06250 951949d945ed4ca4f9ed770d78f1eb27 268 SUPERFAMILY SSF54001 27 250 4.4E-35 T 28-03-2018 DDI_RS20430 075fb02f342f25508d9a522bf2141a8f 415 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 415 1.8E-209 T 28-03-2018 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 DDI_RS20430 075fb02f342f25508d9a522bf2141a8f 415 Pfam PF02515 CoA-transferase family III 5 392 1.1E-98 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 DDI_RS20430 075fb02f342f25508d9a522bf2141a8f 415 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 415 62.152 T 28-03-2018 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 DDI_RS20430 075fb02f342f25508d9a522bf2141a8f 415 SUPERFAMILY SSF89796 1 415 9.81E-122 T 28-03-2018 IPR023606 CoA-transferase family III domain DDI_RS20430 075fb02f342f25508d9a522bf2141a8f 415 Gene3D G3DSA:3.40.50.10540 1 415 1.3E-120 T 28-03-2018 IPR023606 CoA-transferase family III domain DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 PRINTS PR00045 Sigma-54 factor signature 376 388 1.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 PRINTS PR00045 Sigma-54 factor signature 186 203 1.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 PRINTS PR00045 Sigma-54 factor signature 392 403 1.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 PRINTS PR00045 Sigma-54 factor signature 450 468 1.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.2E-69 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 Gene3D G3DSA:1.10.10.10 323 410 2.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 6.4E-60 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 2.0E-16 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 4.7E-156 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS00230 ec9e651e94edc4d0253c5d35efe509db 477 PIRSF PIRSF000774 1 477 2.3E-149 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DDI_RS19400 a85170618f637e5d5ab261571d55e00c 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 6.4E-35 T 28-03-2018 IPR003744 Queuosine precursor transporter DDI_RS19400 a85170618f637e5d5ab261571d55e00c 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 7.6E-61 T 28-03-2018 IPR003744 Queuosine precursor transporter DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 SUPERFAMILY SSF56176 200 286 2.54E-23 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 SMART SM00116 75 124 1.2 T 28-03-2018 IPR000644 CBS domain DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 SMART SM00116 138 186 1.2 T 28-03-2018 IPR000644 CBS domain DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 Pfam PF03471 Transporter associated domain 203 278 4.8E-21 T 28-03-2018 IPR005170 Transporter-associated domain DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 SMART SM01091 202 280 2.4E-28 T 28-03-2018 IPR005170 Transporter-associated domain DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 SUPERFAMILY SSF54631 63 199 3.92E-32 T 28-03-2018 DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 Gene3D G3DSA:3.30.465.10 197 278 1.2E-27 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 Gene3D G3DSA:3.10.580.10 47 196 2.3E-35 T 28-03-2018 DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 Pfam PF00571 CBS domain 137 186 2.8E-4 T 28-03-2018 IPR000644 CBS domain DDI_RS04895 fde2b3d9042ec206d9907fc8b6a46e65 289 Pfam PF00571 CBS domain 66 121 3.0E-8 T 28-03-2018 IPR000644 CBS domain DDI_RS03700 893349feeadafc9a88bb2aa418b2acb2 150 Pfam PF00258 Flavodoxin 6 129 1.6E-23 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDI_RS03700 893349feeadafc9a88bb2aa418b2acb2 150 Gene3D G3DSA:3.40.50.360 1 150 2.2E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS03700 893349feeadafc9a88bb2aa418b2acb2 150 SUPERFAMILY SSF52218 1 148 5.1E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS03700 893349feeadafc9a88bb2aa418b2acb2 150 PRINTS PR00369 Flavodoxin signature 84 94 5.0E-7 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS03700 893349feeadafc9a88bb2aa418b2acb2 150 PRINTS PR00369 Flavodoxin signature 108 127 5.0E-7 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS03700 893349feeadafc9a88bb2aa418b2acb2 150 PRINTS PR00369 Flavodoxin signature 53 64 5.0E-7 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS11710 116db3e1be6d9c8e0687d061dd16c726 353 Gene3D G3DSA:1.10.1530.10 2 79 2.0E-22 T 28-03-2018 DDI_RS11710 116db3e1be6d9c8e0687d061dd16c726 353 Gene3D G3DSA:3.30.1370.60 80 311 3.4E-72 T 28-03-2018 DDI_RS11710 116db3e1be6d9c8e0687d061dd16c726 353 Pfam PF02615 Malate/L-lactate dehydrogenase 3 337 4.8E-103 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 DDI_RS11710 116db3e1be6d9c8e0687d061dd16c726 353 SUPERFAMILY SSF89733 1 342 1.31E-90 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 ProSitePatterns PS00080 Multicopper oxidases signature 2. 537 548 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 Pfam PF00394 Multicopper oxidase 218 298 1.3E-5 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 SUPERFAMILY SSF49503 447 554 3.26E-25 T 28-03-2018 IPR008972 Cupredoxin DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 Gene3D G3DSA:2.60.40.420 29 170 6.4E-30 T 28-03-2018 IPR008972 Cupredoxin DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 Pfam PF07732 Multicopper oxidase 55 167 2.6E-31 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 SUPERFAMILY SSF49503 33 167 3.65E-32 T 28-03-2018 IPR008972 Cupredoxin DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 Gene3D G3DSA:2.60.40.420 442 555 3.5E-29 T 28-03-2018 IPR008972 Cupredoxin DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 Gene3D G3DSA:2.60.40.420 346 413 3.4E-4 T 28-03-2018 IPR008972 Cupredoxin DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 SUPERFAMILY SSF49503 172 289 4.88E-37 T 28-03-2018 IPR008972 Cupredoxin DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 SUPERFAMILY SSF49503 530 554 4.88E-37 T 28-03-2018 IPR008972 Cupredoxin DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 Gene3D G3DSA:2.60.40.420 171 336 1.3E-23 T 28-03-2018 IPR008972 Cupredoxin DDI_RS08415 e4ae8d45b4d5ccecc1e231070c11e07f 555 Pfam PF07731 Multicopper oxidase 434 554 3.2E-24 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DDI_RS12960 19c691c83520a76829319b1e7e22fc55 180 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 38.818 T 28-03-2018 IPR022990 Uncharacterised protein family UPF0115 DDI_RS12960 19c691c83520a76829319b1e7e22fc55 180 SUPERFAMILY SSF160443 96 170 7.32E-10 T 28-03-2018 IPR002625 Smr domain DDI_RS12960 19c691c83520a76829319b1e7e22fc55 180 Pfam PF01713 Smr domain 98 171 6.8E-18 T 28-03-2018 IPR002625 Smr domain DDI_RS12960 19c691c83520a76829319b1e7e22fc55 180 SMART SM00463 95 173 8.4E-21 T 28-03-2018 IPR002625 Smr domain DDI_RS18420 079191c716fa2cb14f49d29ef13c883f 709 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 701 0.0 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 DDI_RS18420 079191c716fa2cb14f49d29ef13c883f 709 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 17 694 0.0 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 DDI_RS07325 ecb051b3dc4dd9610b4e18a9fb331f91 701 SMART SM00491 544 676 2.2E-31 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DDI_RS07325 ecb051b3dc4dd9610b4e18a9fb331f91 701 Gene3D G3DSA:3.40.50.300 25 482 1.8E-25 T 28-03-2018 DDI_RS07325 ecb051b3dc4dd9610b4e18a9fb331f91 701 Pfam PF13307 Helicase C-terminal domain 531 687 1.1E-23 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DDI_RS07325 ecb051b3dc4dd9610b4e18a9fb331f91 701 SMART SM00487 23 300 2.2E-4 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS07325 ecb051b3dc4dd9610b4e18a9fb331f91 701 Pfam PF06733 DEAD_2 198 262 8.4E-8 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 DDI_RS07325 ecb051b3dc4dd9610b4e18a9fb331f91 701 SUPERFAMILY SSF52540 13 120 2.0E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07325 ecb051b3dc4dd9610b4e18a9fb331f91 701 SUPERFAMILY SSF52540 210 264 2.0E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07325 ecb051b3dc4dd9610b4e18a9fb331f91 701 SUPERFAMILY SSF52540 635 670 2.0E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09525 892365177e74e0f020907e371674360e 202 Gene3D G3DSA:3.40.50.720 66 202 5.3E-6 T 28-03-2018 DDI_RS17915 5d0551878ab7344b88c3a6da3bda8079 185 Gene3D G3DSA:3.30.65.10 54 97 1.8E-15 T 28-03-2018 DDI_RS17915 5d0551878ab7344b88c3a6da3bda8079 185 Gene3D G3DSA:3.30.65.10 3 53 4.4E-16 T 28-03-2018 DDI_RS17915 5d0551878ab7344b88c3a6da3bda8079 185 Gene3D G3DSA:3.30.65.10 98 144 3.6E-11 T 28-03-2018 DDI_RS17915 5d0551878ab7344b88c3a6da3bda8079 185 SUPERFAMILY SSF57783 11 48 1.53E-13 T 28-03-2018 DDI_RS17915 5d0551878ab7344b88c3a6da3bda8079 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 61 96 2.1E-15 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDI_RS17915 5d0551878ab7344b88c3a6da3bda8079 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 141 5.9E-13 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDI_RS17915 5d0551878ab7344b88c3a6da3bda8079 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 12 48 4.5E-15 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDI_RS17915 5d0551878ab7344b88c3a6da3bda8079 185 SUPERFAMILY SSF57783 59 99 7.65E-13 T 28-03-2018 DDI_RS08185 6a865040badb9caafe22efec5ccc7938 228 Pfam PF02224 Cytidylate kinase 8 221 2.0E-80 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DDI_RS08185 6a865040badb9caafe22efec5ccc7938 228 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.711 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DDI_RS08185 6a865040badb9caafe22efec5ccc7938 228 Gene3D G3DSA:3.40.50.300 3 224 5.4E-50 T 28-03-2018 DDI_RS08185 6a865040badb9caafe22efec5ccc7938 228 SUPERFAMILY SSF52540 6 223 6.44E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08185 6a865040badb9caafe22efec5ccc7938 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 218 3.0E-91 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DDI_RS18285 2cdf09f273c8d98668656ca670e3d409 401 Gene3D G3DSA:1.10.10.60 337 392 1.7E-11 T 28-03-2018 DDI_RS18285 2cdf09f273c8d98668656ca670e3d409 401 SUPERFAMILY SSF46689 341 392 1.39E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS18285 2cdf09f273c8d98668656ca670e3d409 401 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 217 226 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site DDI_RS18285 2cdf09f273c8d98668656ca670e3d409 401 Pfam PF12833 Helix-turn-helix domain 310 389 1.4E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS18285 2cdf09f273c8d98668656ca670e3d409 401 SUPERFAMILY SSF52540 41 249 6.16E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18285 2cdf09f273c8d98668656ca670e3d409 401 Gene3D G3DSA:1.10.8.60 179 291 8.1E-14 T 28-03-2018 DDI_RS18285 2cdf09f273c8d98668656ca670e3d409 401 Gene3D G3DSA:1.10.10.60 292 336 7.0E-8 T 28-03-2018 DDI_RS18285 2cdf09f273c8d98668656ca670e3d409 401 SMART SM00342 304 388 8.2E-14 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS04065 16a4192ad790bfdeee31b82b2ce1291d 303 SUPERFAMILY SSF53067 3 301 4.2E-64 T 28-03-2018 DDI_RS04065 16a4192ad790bfdeee31b82b2ce1291d 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 DDI_RS04065 16a4192ad790bfdeee31b82b2ce1291d 303 Gene3D G3DSA:3.30.420.40 1 115 1.3E-23 T 28-03-2018 DDI_RS04065 16a4192ad790bfdeee31b82b2ce1291d 303 Gene3D G3DSA:3.30.420.40 116 301 1.4E-51 T 28-03-2018 DDI_RS04065 16a4192ad790bfdeee31b82b2ce1291d 303 Pfam PF00480 ROK family 3 301 1.9E-89 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 DDI_RS11840 7838f6b3dea8f499cd849b91b9da6aa5 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.441 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 DDI_RS11840 7838f6b3dea8f499cd849b91b9da6aa5 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 1.6E-141 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 DDI_RS11840 7838f6b3dea8f499cd849b91b9da6aa5 306 PIRSF PIRSF026649 2 306 7.0E-97 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDI_RS11840 7838f6b3dea8f499cd849b91b9da6aa5 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 297 1.9E-100 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 Gene3D G3DSA:3.40.1160.10 6 289 4.9E-65 T 28-03-2018 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 ProSitePatterns PS00324 Aspartokinase signature. 11 19 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 SUPERFAMILY SSF53633 9 297 1.05E-75 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 Gene3D G3DSA:3.30.70.260 376 454 4.1E-15 T 28-03-2018 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 8 454 3.3E-143 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 PIRSF PIRSF000726 7 454 1.3E-150 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 Pfam PF00696 Amino acid kinase family 9 282 1.5E-48 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 SUPERFAMILY SSF55021 382 453 1.49E-13 T 28-03-2018 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 SUPERFAMILY SSF55021 301 399 2.81E-17 T 28-03-2018 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 Gene3D G3DSA:3.30.70.260 290 375 2.1E-19 T 28-03-2018 DDI_RS17815 8724ba2bb220d340eee83a8ade26135a 454 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 454 1.1E-131 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 DDI_RS10580 b5f181dcf018c14d85aeead57cc5cfc2 342 Pfam PF00753 Metallo-beta-lactamase superfamily 96 227 3.5E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS10580 b5f181dcf018c14d85aeead57cc5cfc2 342 SUPERFAMILY SSF56281 81 289 2.62E-41 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS10580 b5f181dcf018c14d85aeead57cc5cfc2 342 Gene3D G3DSA:3.60.15.10 64 339 1.4E-35 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS10580 b5f181dcf018c14d85aeead57cc5cfc2 342 SMART SM00849 95 282 4.7E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS09885 9c20fdc4aea9da2954fed28aaa8e3c39 270 PIRSF PIRSF018249 2 269 2.3E-81 T 28-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 DDI_RS09885 9c20fdc4aea9da2954fed28aaa8e3c39 270 Pfam PF13847 Methyltransferase domain 88 153 1.1E-11 T 28-03-2018 IPR025714 Methyltransferase domain DDI_RS09885 9c20fdc4aea9da2954fed28aaa8e3c39 270 Gene3D G3DSA:3.40.50.150 1 270 1.1E-47 T 28-03-2018 DDI_RS09885 9c20fdc4aea9da2954fed28aaa8e3c39 270 SUPERFAMILY SSF53335 4 247 4.26E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS06365 062104a95c9beff70eaeb0237042a149 268 Gene3D G3DSA:3.40.190.10 120 265 1.4E-48 T 28-03-2018 DDI_RS06365 062104a95c9beff70eaeb0237042a149 268 Pfam PF03180 NLPA lipoprotein 28 265 2.4E-77 T 28-03-2018 IPR004872 Lipoprotein NlpA family DDI_RS06365 062104a95c9beff70eaeb0237042a149 268 PIRSF PIRSF002854 1 267 2.2E-97 T 28-03-2018 IPR004872 Lipoprotein NlpA family DDI_RS06365 062104a95c9beff70eaeb0237042a149 268 SUPERFAMILY SSF53850 28 265 1.92E-66 T 28-03-2018 DDI_RS06365 062104a95c9beff70eaeb0237042a149 268 Gene3D G3DSA:3.40.190.10 24 119 7.5E-17 T 28-03-2018 DDI_RS06115 45bc8ef6e4652042be8577685a80d83d 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 146 4.4E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS06115 45bc8ef6e4652042be8577685a80d83d 704 Gene3D G3DSA:2.40.170.20 165 704 4.0E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS06115 45bc8ef6e4652042be8577685a80d83d 704 Gene3D G3DSA:2.170.130.10 19 153 3.6E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS06115 45bc8ef6e4652042be8577685a80d83d 704 SUPERFAMILY SSF56935 22 704 2.59E-93 T 28-03-2018 DDI_RS06115 45bc8ef6e4652042be8577685a80d83d 704 Pfam PF00593 TonB dependent receptor 258 702 2.1E-34 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS00490 3fbba265f1a0abedecf1f953de8181b7 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS00490 3fbba265f1a0abedecf1f953de8181b7 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 4.3E-89 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDI_RS00490 3fbba265f1a0abedecf1f953de8181b7 387 Gene3D G3DSA:3.40.50.1970 9 183 4.8E-43 T 28-03-2018 DDI_RS00490 3fbba265f1a0abedecf1f953de8181b7 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS00490 3fbba265f1a0abedecf1f953de8181b7 387 SUPERFAMILY SSF56796 1 376 1.28E-106 T 28-03-2018 DDI_RS00490 3fbba265f1a0abedecf1f953de8181b7 387 Gene3D G3DSA:1.20.1090.10 184 387 4.9E-39 T 28-03-2018 DDI_RS20210 3770980461ef0a9c607605a71339476f 177 Gene3D G3DSA:3.30.70.20 20 61 4.0E-8 T 28-03-2018 DDI_RS20210 3770980461ef0a9c607605a71339476f 177 Gene3D G3DSA:3.30.70.20 96 133 1.9E-10 T 28-03-2018 DDI_RS20210 3770980461ef0a9c607605a71339476f 177 SUPERFAMILY SSF54862 2 166 1.81E-39 T 28-03-2018 DDI_RS20210 3770980461ef0a9c607605a71339476f 177 Gene3D G3DSA:3.30.70.20 134 173 3.9E-4 T 28-03-2018 DDI_RS20210 3770980461ef0a9c607605a71339476f 177 Pfam PF00037 4Fe-4S binding domain 82 104 2.9E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS20210 3770980461ef0a9c607605a71339476f 177 Pfam PF12800 4Fe-4S binding domain 11 22 0.052 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS20210 3770980461ef0a9c607605a71339476f 177 Gene3D G3DSA:3.30.70.20 62 95 2.6E-10 T 28-03-2018 DDI_RS20210 3770980461ef0a9c607605a71339476f 177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS20210 3770980461ef0a9c607605a71339476f 177 Gene3D G3DSA:3.30.70.20 1 19 0.018 T 28-03-2018 DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 Gene3D G3DSA:3.40.50.720 45 253 9.9E-58 T 28-03-2018 DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 Gene3D G3DSA:3.40.50.720 3 44 1.2E-6 T 28-03-2018 DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 4.4E-58 T 28-03-2018 DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 SUPERFAMILY SSF51735 9 252 3.31E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 5.7E-139 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 DDI_RS09920 356be54443fccbefe67cb6d66be8bc11 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS07715 6928d505d02e99e691f71660d85ccab0 191 Pfam PF00877 NlpC/P60 family 79 183 8.7E-32 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain DDI_RS07715 6928d505d02e99e691f71660d85ccab0 191 Gene3D G3DSA:3.90.1720.10 62 191 8.3E-39 T 28-03-2018 DDI_RS07715 6928d505d02e99e691f71660d85ccab0 191 SUPERFAMILY SSF54001 67 186 5.4E-39 T 28-03-2018 DDI_RS09600 6e9aa3c21b1f990d3832acd147cc84b8 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 8.4E-42 T 28-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDI_RS09600 6e9aa3c21b1f990d3832acd147cc84b8 269 Gene3D G3DSA:1.25.40.10 31 268 2.7E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS09600 6e9aa3c21b1f990d3832acd147cc84b8 269 Pfam PF13371 Tetratricopeptide repeat 187 258 5.3E-24 T 28-03-2018 DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 Gene3D G3DSA:1.10.10.10 1 85 4.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 Gene3D G3DSA:3.40.190.10 91 180 8.6E-21 T 28-03-2018 DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 Gene3D G3DSA:3.40.190.10 256 324 0.024 T 28-03-2018 DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 SUPERFAMILY SSF46785 1 85 2.89E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 SUPERFAMILY SSF53850 91 322 1.73E-44 T 28-03-2018 DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 Pfam PF03466 LysR substrate binding domain 92 291 4.5E-41 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 Gene3D G3DSA:3.40.190.10 181 255 2.5E-23 T 28-03-2018 DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS09190 6036e79be527708137ce0319ba4e1a40 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13760 e070c547281b720f94b3e49d57ec2e1d 122 Gene3D G3DSA:3.30.1300.30 34 120 1.3E-15 T 28-03-2018 DDI_RS13760 e070c547281b720f94b3e49d57ec2e1d 122 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 106 4.4E-12 T 28-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 DDI_RS13760 e070c547281b720f94b3e49d57ec2e1d 122 Pfam PF02501 Type II secretion system (T2SS), protein I 44 118 4.4E-15 T 28-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 DDI_RS13760 e070c547281b720f94b3e49d57ec2e1d 122 SUPERFAMILY SSF54523 44 117 5.23E-12 T 28-03-2018 DDI_RS20250 a0ba91a465806930e563140b4b531f9d 132 SUPERFAMILY SSF103481 43 124 9.68E-9 T 28-03-2018 DDI_RS20250 a0ba91a465806930e563140b4b531f9d 132 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 126 21.055 T 28-03-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.379 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 Pfam PF07549 SecD/SecF GG Motif 40 66 2.8E-11 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 Pfam PF02355 Protein export membrane protein 119 301 3.5E-68 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 124 289 2.0E-53 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 6.8E-86 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 SUPERFAMILY SSF82866 80 303 6.67E-40 T 28-03-2018 DDI_RS04140 a7004ddf381906e7ca6cf28763e1de33 323 Gene3D G3DSA:1.20.1640.10 102 313 3.1E-31 T 28-03-2018 DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 Gene3D G3DSA:3.40.50.970 472 706 1.3E-65 T 28-03-2018 DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 105 297 1.2E-8 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 Gene3D G3DSA:3.40.50.970 57 471 2.3E-82 T 28-03-2018 DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 SUPERFAMILY SSF52518 59 468 3.77E-142 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 SUPERFAMILY SSF52518 474 701 1.41E-97 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 Gene3D G3DSA:3.40.50.920 707 887 1.3E-42 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 PIRSF PIRSF000156 1 887 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DDI_RS16605 33443d7976d179ebf3ae9ab1d52a138e 887 SUPERFAMILY SSF52922 702 885 6.46E-63 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 DDI_RS14730 9b424ef7d595ab2704223bfa16c3763c 354 Gene3D G3DSA:3.20.20.70 9 354 3.0E-129 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS14730 9b424ef7d595ab2704223bfa16c3763c 354 PIRSF PIRSF001361 1 354 2.7E-163 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DDI_RS14730 9b424ef7d595ab2704223bfa16c3763c 354 SUPERFAMILY SSF51569 9 347 6.18E-136 T 28-03-2018 DDI_RS14730 9b424ef7d595ab2704223bfa16c3763c 354 Pfam PF00793 DAHP synthetase I family 41 340 8.7E-106 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDI_RS14730 9b424ef7d595ab2704223bfa16c3763c 354 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 350 1.6E-165 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DDI_RS17190 dc67182524281ed1f92b23de28857984 397 Gene3D G3DSA:1.20.1250.20 195 389 1.8E-12 T 28-03-2018 DDI_RS17190 dc67182524281ed1f92b23de28857984 397 SUPERFAMILY SSF103473 5 388 1.31E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS17190 dc67182524281ed1f92b23de28857984 397 Pfam PF07690 Major Facilitator Superfamily 13 323 1.5E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS17190 dc67182524281ed1f92b23de28857984 397 Gene3D G3DSA:1.20.1250.20 1 194 3.8E-20 T 28-03-2018 DDI_RS07255 e9fe5343d95a8658f09f6e4cded3bc81 271 SMART SM00342 158 241 2.1E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS07255 e9fe5343d95a8658f09f6e4cded3bc81 271 Gene3D G3DSA:2.60.120.10 6 81 1.6E-5 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS07255 e9fe5343d95a8658f09f6e4cded3bc81 271 SUPERFAMILY SSF46689 143 191 1.84E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS07255 e9fe5343d95a8658f09f6e4cded3bc81 271 SUPERFAMILY SSF46689 194 244 2.06E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS07255 e9fe5343d95a8658f09f6e4cded3bc81 271 Pfam PF12833 Helix-turn-helix domain 164 243 2.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS07255 e9fe5343d95a8658f09f6e4cded3bc81 271 Gene3D G3DSA:1.10.10.60 198 256 1.0E-12 T 28-03-2018 DDI_RS07255 e9fe5343d95a8658f09f6e4cded3bc81 271 Gene3D G3DSA:1.10.10.60 116 197 1.3E-8 T 28-03-2018 DDI_RS07255 e9fe5343d95a8658f09f6e4cded3bc81 271 SUPERFAMILY SSF51182 15 81 9.22E-6 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS11705 2310e3943491d2ef9532f0a1684dac1a 116 Gene3D G3DSA:3.30.428.10 1 110 1.5E-27 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 DDI_RS11705 2310e3943491d2ef9532f0a1684dac1a 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 28-03-2018 IPR019808 Histidine triad, conserved site DDI_RS11705 2310e3943491d2ef9532f0a1684dac1a 116 PRINTS PR00332 Histidine triad family signature 27 45 7.7E-19 T 28-03-2018 IPR001310 Histidine triad (HIT) protein DDI_RS11705 2310e3943491d2ef9532f0a1684dac1a 116 PRINTS PR00332 Histidine triad family signature 95 105 7.7E-19 T 28-03-2018 IPR001310 Histidine triad (HIT) protein DDI_RS11705 2310e3943491d2ef9532f0a1684dac1a 116 PRINTS PR00332 Histidine triad family signature 6 22 7.7E-19 T 28-03-2018 IPR001310 Histidine triad (HIT) protein DDI_RS11705 2310e3943491d2ef9532f0a1684dac1a 116 SUPERFAMILY SSF54197 2 112 1.02E-34 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 DDI_RS11705 2310e3943491d2ef9532f0a1684dac1a 116 Pfam PF01230 HIT domain 12 109 4.6E-28 T 28-03-2018 IPR001310 Histidine triad (HIT) protein DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 SUPERFAMILY SSF46785 11 87 1.12E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 SUPERFAMILY SSF48008 79 229 1.7E-60 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 Pfam PF07840 FadR C-terminal domain 72 234 2.3E-69 T 28-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 8.4E-116 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 154.627 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 Gene3D G3DSA:1.20.120.530 80 238 1.5E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 Gene3D G3DSA:1.10.10.10 1 79 5.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.9E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.9E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 SMART SM00345 12 71 8.4E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS09760 e07f7cf44ebb206347a1fa0f596f3e2b 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 1.2E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 428 35.534 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 Gene3D G3DSA:3.65.10.10 228 427 3.9E-70 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 PIRSF PIRSF000505 2 429 1.1E-154 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 427 5.3E-142 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 422 4.0E-154 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 SUPERFAMILY SSF55205 5 425 1.31E-143 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDI_RS08180 f86333a9da96b4de91100238347e6b5d 429 Gene3D G3DSA:3.65.10.10 22 227 5.8E-65 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DDI_RS15550 7c83a088c854acd354802e066d0e34cd 453 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 41 137 3.5E-7 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DDI_RS15550 7c83a088c854acd354802e066d0e34cd 453 Gene3D G3DSA:3.20.20.120 145 413 1.6E-54 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS15550 7c83a088c854acd354802e066d0e34cd 453 SMART SM00922 185 285 5.4E-14 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS15550 7c83a088c854acd354802e066d0e34cd 453 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 112 137 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DDI_RS15550 7c83a088c854acd354802e066d0e34cd 453 SUPERFAMILY SSF54826 7 137 1.34E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15550 7c83a088c854acd354802e066d0e34cd 453 Gene3D G3DSA:3.30.390.10 9 144 1.6E-33 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15550 7c83a088c854acd354802e066d0e34cd 453 SUPERFAMILY SSF51604 139 415 2.25E-82 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS15550 7c83a088c854acd354802e066d0e34cd 453 Pfam PF13378 Enolase C-terminal domain-like 189 405 3.8E-36 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS16965 ca58daece2f06a4b2f9013a520b62fb3 156 Pfam PF12821 Threonine/Serine exporter, ThrE 12 145 2.4E-35 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE DDI_RS16965 ca58daece2f06a4b2f9013a520b62fb3 156 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 156 35.687 T 28-03-2018 IPR020914 Uncharacterised protein family UPF0442 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 SUPERFAMILY SSF48179 204 381 6.46E-45 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 8.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 8.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 8.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 8.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 5.1E-22 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 Gene3D G3DSA:3.40.50.720 76 202 2.6E-30 T 28-03-2018 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 Gene3D G3DSA:3.40.50.720 1 75 4.9E-7 T 28-03-2018 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 SUPERFAMILY SSF51735 1 203 5.31E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 371 3.7E-64 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 Gene3D G3DSA:1.10.1040.10 207 382 2.7E-46 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS20600 e1cdce114c75031cbcbd11c6d0d69da1 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.431 T 28-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS13530 bdf55be111f40f835207b5d95f1ee71f 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 1.5E-13 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DDI_RS13530 bdf55be111f40f835207b5d95f1ee71f 88 SUPERFAMILY SSF57716 38 71 1.07E-8 T 28-03-2018 DDI_RS13530 bdf55be111f40f835207b5d95f1ee71f 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 4.9E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DDI_RS13530 bdf55be111f40f835207b5d95f1ee71f 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 4.9E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DDI_RS13530 bdf55be111f40f835207b5d95f1ee71f 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DDI_RS03355 d08d523261e4ff512d131ac455722638 182 SUPERFAMILY SSF48498 79 174 5.07E-22 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS03355 d08d523261e4ff512d131ac455722638 182 Gene3D G3DSA:1.10.10.60 3 61 3.6E-17 T 28-03-2018 DDI_RS03355 d08d523261e4ff512d131ac455722638 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 3.5E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS03355 d08d523261e4ff512d131ac455722638 182 Gene3D G3DSA:1.10.357.10 62 175 8.6E-12 T 28-03-2018 DDI_RS03355 d08d523261e4ff512d131ac455722638 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 9.0E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS03355 d08d523261e4ff512d131ac455722638 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 9.0E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS03355 d08d523261e4ff512d131ac455722638 182 SUPERFAMILY SSF46689 3 69 1.8E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS15730 5c3090a490cb6b16f4836bd967a6049a 106 Pfam PF00436 Single-strand binding protein family 5 88 7.6E-11 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DDI_RS15730 5c3090a490cb6b16f4836bd967a6049a 106 PIRSF PIRSF003135 1 103 8.7E-48 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DDI_RS15730 5c3090a490cb6b16f4836bd967a6049a 106 Gene3D G3DSA:2.40.50.140 4 106 6.7E-11 T 28-03-2018 DDI_RS15730 5c3090a490cb6b16f4836bd967a6049a 106 SUPERFAMILY SSF50249 3 105 2.16E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS15730 5c3090a490cb6b16f4836bd967a6049a 106 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 5 101 7.2E-36 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DDI_RS15730 5c3090a490cb6b16f4836bd967a6049a 106 Hamap MF_00720 Primosomal replication protein N [priB]. 4 102 23.754 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 SMART SM00904 183 308 1.6E-63 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 PIRSF PIRSF004491 1 311 4.0E-103 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 SUPERFAMILY SSF52374 16 175 7.04E-34 T 28-03-2018 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 2.6E-112 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 Gene3D G3DSA:2.40.30.30 180 311 2.7E-41 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 Pfam PF01687 Riboflavin kinase 184 307 2.1E-38 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 SUPERFAMILY SSF82114 174 308 5.67E-44 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 Pfam PF06574 FAD synthetase 12 167 3.7E-55 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DDI_RS17020 d87fa9b55f1b54be9f93932647b6b4d4 313 Gene3D G3DSA:3.40.50.620 1 179 2.1E-47 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS15175 9aea4a29f9646cac614c9bcf6f575995 243 SMART SM00382 28 215 4.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS15175 9aea4a29f9646cac614c9bcf6f575995 243 Pfam PF00005 ABC transporter 19 167 2.2E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS15175 9aea4a29f9646cac614c9bcf6f575995 243 SUPERFAMILY SSF52540 3 236 8.68E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15175 9aea4a29f9646cac614c9bcf6f575995 243 Gene3D G3DSA:3.40.50.300 1 242 2.4E-75 T 28-03-2018 DDI_RS15175 9aea4a29f9646cac614c9bcf6f575995 243 PIRSF PIRSF039085 1 243 6.3E-111 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS15175 9aea4a29f9646cac614c9bcf6f575995 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS03690 2fbb943271d48d5dfc7d4c65f5e3308e 106 PIRSF PIRSF006257 1 106 1.2E-37 T 28-03-2018 IPR007384 Protein of unknown function UCP006257 DDI_RS03690 2fbb943271d48d5dfc7d4c65f5e3308e 106 SUPERFAMILY SSF158452 1 105 1.06E-36 T 28-03-2018 IPR023376 YqcC-like domain DDI_RS03690 2fbb943271d48d5dfc7d4c65f5e3308e 106 Gene3D G3DSA:1.20.1440.40 3 104 2.5E-34 T 28-03-2018 IPR023376 YqcC-like domain DDI_RS03690 2fbb943271d48d5dfc7d4c65f5e3308e 106 Pfam PF04287 tRNA pseudouridine synthase C 8 103 1.1E-33 T 28-03-2018 IPR023376 YqcC-like domain DDI_RS07260 558f47d63e9358406bf4cee4ca542be6 319 SUPERFAMILY SSF103481 51 144 4.45E-7 T 28-03-2018 DDI_RS07260 558f47d63e9358406bf4cee4ca542be6 319 Pfam PF00892 EamA-like transporter family 9 116 1.9E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS09430 382be673bf6a342f685686720fd4c724 285 Gene3D G3DSA:3.90.25.10 170 283 3.8E-5 T 28-03-2018 DDI_RS09430 382be673bf6a342f685686720fd4c724 285 Pfam PF05368 NmrA-like family 3 220 2.0E-23 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 DDI_RS09430 382be673bf6a342f685686720fd4c724 285 SUPERFAMILY SSF51735 3 249 1.07E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS09430 382be673bf6a342f685686720fd4c724 285 Gene3D G3DSA:3.40.50.720 2 151 3.7E-22 T 28-03-2018 DDI_RS11095 42dc77d8b55ce6779d092af3e1e96d8c 157 Pfam PF10097 Predicted membrane protein (DUF2335) 55 104 3.6E-23 T 28-03-2018 IPR019284 Xylella phage Xfas53, Orf42 DDI_RS00530 b486160b898fd9c460e3b1680e2dcf23 419 SUPERFAMILY SSF51658 4 416 1.95E-79 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS00530 b486160b898fd9c460e3b1680e2dcf23 419 Gene3D G3DSA:3.20.20.150 1 419 2.2E-108 T 28-03-2018 DDI_RS00530 b486160b898fd9c460e3b1680e2dcf23 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 258.518 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DDI_RS00530 b486160b898fd9c460e3b1680e2dcf23 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 28-03-2018 DDI_RS00530 b486160b898fd9c460e3b1680e2dcf23 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 4 418 2.2E-220 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DDI_RS00530 b486160b898fd9c460e3b1680e2dcf23 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 9.0E-226 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DDI_RS11505 2a0d8bd062ea0258fe77c7604a3ecb66 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 9.7E-190 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DDI_RS11505 2a0d8bd062ea0258fe77c7604a3ecb66 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 69.229 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DDI_RS11505 2a0d8bd062ea0258fe77c7604a3ecb66 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 5.2E-89 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS11505 2a0d8bd062ea0258fe77c7604a3ecb66 382 Gene3D G3DSA:3.20.20.30 1 355 3.0E-95 T 28-03-2018 DDI_RS11505 2a0d8bd062ea0258fe77c7604a3ecb66 382 SUPERFAMILY SSF51679 3 349 2.09E-100 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 7.9E-17 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 Gene3D G3DSA:1.20.5.1030 68 119 2.7E-18 T 28-03-2018 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.038 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 122 1.3E-19 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 2.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 2.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 2.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 DDI_RS21425 e09dfdffe0d393da30e713e76fa26e81 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 2.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 DDI_RS04720 6e39f0a3ca3d479740a9ac5fd7076f20 155 Gene3D G3DSA:3.40.30.10 1 154 1.1E-38 T 28-03-2018 DDI_RS04720 6e39f0a3ca3d479740a9ac5fd7076f20 155 SUPERFAMILY SSF52833 4 154 2.18E-46 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS04720 6e39f0a3ca3d479740a9ac5fd7076f20 155 Pfam PF00578 AhpC/TSA family 7 134 1.2E-36 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DDI_RS17925 9d59e1d50ce8026311eef2e5bd7cee49 377 SUPERFAMILY SSF102405 76 284 6.11E-41 T 28-03-2018 DDI_RS17925 9d59e1d50ce8026311eef2e5bd7cee49 377 Gene3D G3DSA:3.40.50.450 108 253 5.2E-37 T 28-03-2018 DDI_RS17925 9d59e1d50ce8026311eef2e5bd7cee49 377 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 65 283 2.2E-82 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DDI_RS17925 9d59e1d50ce8026311eef2e5bd7cee49 377 Gene3D G3DSA:1.10.10.10 274 365 1.0E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17925 9d59e1d50ce8026311eef2e5bd7cee49 377 Pfam PF02481 DNA recombination-mediator protein A 67 274 4.9E-76 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 SUPERFAMILY SSF52218 3 173 5.24E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 PRINTS PR00369 Flavodoxin signature 88 98 1.7E-5 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 PRINTS PR00369 Flavodoxin signature 51 62 1.7E-5 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 PRINTS PR00369 Flavodoxin signature 5 18 1.7E-5 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 Gene3D G3DSA:3.40.50.360 3 175 1.8E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 PIRSF PIRSF038996 1 176 7.3E-56 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 Pfam PF00258 Flavodoxin 6 167 3.0E-27 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDI_RS17525 31204dfffc8091f118a7ded38b11a4f9 176 TIGRFAM TIGR01752 flav_long: flavodoxin 3 173 4.0E-64 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 DDI_RS00075 de247c2541d932fa53d8e1d1bf245c56 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 7.0E-137 T 28-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DDI_RS00075 de247c2541d932fa53d8e1d1bf245c56 321 SUPERFAMILY SSF51395 10 319 8.24E-89 T 28-03-2018 DDI_RS00075 de247c2541d932fa53d8e1d1bf245c56 321 Gene3D G3DSA:1.10.1200.80 252 321 1.6E-20 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DDI_RS00075 de247c2541d932fa53d8e1d1bf245c56 321 PIRSF PIRSF006621 1 321 1.2E-99 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS00075 de247c2541d932fa53d8e1d1bf245c56 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.006 T 28-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 DDI_RS00075 de247c2541d932fa53d8e1d1bf245c56 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS00075 de247c2541d932fa53d8e1d1bf245c56 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 2.8E-113 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDI_RS00075 de247c2541d932fa53d8e1d1bf245c56 321 Gene3D G3DSA:3.20.20.70 6 246 7.0E-57 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS06465 a451344a74f8472ac2a64acdcc395f82 285 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 17 275 1.9E-67 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDI_RS06465 a451344a74f8472ac2a64acdcc395f82 285 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 285 148.741 T 28-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDI_RS06465 a451344a74f8472ac2a64acdcc395f82 285 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 14 278 3.0E-92 T 28-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDI_RS11740 80b1c0b48de50446e7a2eafa1d8772cc 267 SUPERFAMILY SSF56752 1 254 7.46E-66 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS11740 80b1c0b48de50446e7a2eafa1d8772cc 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 3.3E-110 T 28-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 DDI_RS11740 80b1c0b48de50446e7a2eafa1d8772cc 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS11740 80b1c0b48de50446e7a2eafa1d8772cc 267 Gene3D G3DSA:3.20.10.10 113 257 6.5E-30 T 28-03-2018 DDI_RS11740 80b1c0b48de50446e7a2eafa1d8772cc 267 Pfam PF01063 Amino-transferase class IV 24 246 2.4E-43 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS11740 80b1c0b48de50446e7a2eafa1d8772cc 267 Gene3D G3DSA:3.30.470.10 1 108 1.6E-27 T 28-03-2018 DDI_RS04410 f52541594e3186cc46b59f3a42476e37 177 Gene3D G3DSA:1.20.120.330 2 176 0.0022 T 28-03-2018 DDI_RS04410 f52541594e3186cc46b59f3a42476e37 177 Pfam PF07445 Primosomal replication protein priC 10 174 5.6E-53 T 28-03-2018 IPR010890 Primosomal replication PriB/PriC DDI_RS13465 f8d4b05d1018d069e21a7a72c1ea888d 164 Gene3D G3DSA:2.40.100.10 1 164 9.4E-51 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS13465 f8d4b05d1018d069e21a7a72c1ea888d 164 SUPERFAMILY SSF50891 1 162 7.6E-58 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS13465 f8d4b05d1018d069e21a7a72c1ea888d 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DDI_RS13465 f8d4b05d1018d069e21a7a72c1ea888d 164 PIRSF PIRSF001467 1 163 1.7E-27 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DDI_RS13465 f8d4b05d1018d069e21a7a72c1ea888d 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 2.3E-46 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 DDI_RS13465 f8d4b05d1018d069e21a7a72c1ea888d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 9.4E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 DDI_RS13465 f8d4b05d1018d069e21a7a72c1ea888d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 9.4E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 DDI_RS13465 f8d4b05d1018d069e21a7a72c1ea888d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 9.4E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 DDI_RS20925 208adaa9da78cc5a39ebe9ce1c7c1386 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 76 4.6E-12 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS20925 208adaa9da78cc5a39ebe9ce1c7c1386 300 Gene3D G3DSA:1.10.3720.10 21 289 2.2E-43 T 28-03-2018 DDI_RS20925 208adaa9da78cc5a39ebe9ce1c7c1386 300 SUPERFAMILY SSF161098 94 281 4.32E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20925 208adaa9da78cc5a39ebe9ce1c7c1386 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 298 1.8E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09210 ec937eef1689d9b546a40b60f47eefba 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 1.1E-138 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 DDI_RS09210 ec937eef1689d9b546a40b60f47eefba 350 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 1.6E-106 T 28-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 DDI_RS09210 ec937eef1689d9b546a40b60f47eefba 350 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.148 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 Gene3D G3DSA:3.40.190.10 89 173 4.8E-10 T 28-03-2018 DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 Gene3D G3DSA:1.10.10.10 3 88 2.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 SUPERFAMILY SSF53850 98 289 1.99E-28 T 28-03-2018 DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 Pfam PF03466 LysR substrate binding domain 90 287 8.5E-28 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 SUPERFAMILY SSF46785 4 87 6.69E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12450 5c25de5561fcce979ab2d5174070da11 298 Gene3D G3DSA:3.40.190.10 174 261 4.2E-21 T 28-03-2018 DDI_RS07600 a3a604a4c5d1624065a569e251730b98 878 Pfam PF13362 Toprim domain 195 293 1.2E-14 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS07600 a3a604a4c5d1624065a569e251730b98 878 Gene3D G3DSA:3.40.1360.10 181 306 2.1E-15 T 28-03-2018 DDI_RS07600 a3a604a4c5d1624065a569e251730b98 878 SUPERFAMILY SSF57783 15 93 1.79E-11 T 28-03-2018 DDI_RS07600 a3a604a4c5d1624065a569e251730b98 878 Pfam PF06048 Domain of unknown function (DUF927) 327 606 4.2E-54 T 28-03-2018 IPR009270 Domain of unknown function DUF927 DDI_RS07600 a3a604a4c5d1624065a569e251730b98 878 Pfam PF08273 Zinc-binding domain of primase-helicase 35 69 3.8E-14 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 DDI_RS07600 a3a604a4c5d1624065a569e251730b98 878 Gene3D G3DSA:3.90.580.10 7 99 8.6E-12 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS07600 a3a604a4c5d1624065a569e251730b98 878 SMART SM00778 34 69 2.3E-15 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 SUPERFAMILY SSF52151 516 608 4.45E-44 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 SUPERFAMILY SSF52151 323 453 4.45E-44 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 282 8.5E-89 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 SUPERFAMILY SSF55048 122 190 1.01E-9 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 309 5.9E-28 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 327 626 4.4E-35 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 SUPERFAMILY SSF52151 183 283 2.17E-60 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 SUPERFAMILY SSF52151 4 118 2.17E-60 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 Gene3D G3DSA:3.40.366.10 316 612 1.8E-52 T 28-03-2018 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 Gene3D G3DSA:3.40.366.10 1 173 3.4E-39 T 28-03-2018 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 Pfam PF00698 Acyl transferase domain 4 302 2.4E-31 T 28-03-2018 IPR014043 Acyl transferase DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 Pfam PF00698 Acyl transferase domain 325 598 1.6E-35 T 28-03-2018 IPR014043 Acyl transferase DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 SUPERFAMILY SSF55048 453 514 4.32E-5 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 DDI_RS12275 6f931a3318f83bcad66f605dce11c3db 639 Gene3D G3DSA:3.40.366.10 174 287 8.0E-23 T 28-03-2018 DDI_RS20225 f86c3e498e330e941116ee1694fb6de5 334 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 9 331 61.984 T 28-03-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 DDI_RS20225 f86c3e498e330e941116ee1694fb6de5 334 Gene3D G3DSA:3.90.550.10 5 254 8.9E-32 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS20225 f86c3e498e330e941116ee1694fb6de5 334 Pfam PF00535 Glycosyl transferase family 2 18 178 3.3E-32 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS20225 f86c3e498e330e941116ee1694fb6de5 334 SUPERFAMILY SSF53448 16 254 6.06E-38 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS02580 c3f711efea0ca2d84f6817a071d65907 455 Pfam PF00860 Permease family 32 415 1.6E-82 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS05720 fa7da3799adf6a8758875d624e61ca26 134 Pfam PF10711 Hypothetical protein (DUF2513) 2 110 1.2E-20 T 28-03-2018 IPR019650 Protein of unknown function DUF2513 DDI_RS10345 4cb04f3ca332b37cab6df0ab586ee137 320 Gene3D G3DSA:2.60.200.20 2 220 1.1E-18 T 28-03-2018 DDI_RS10345 4cb04f3ca332b37cab6df0ab586ee137 320 Gene3D G3DSA:2.60.200.20 221 311 0.0011 T 28-03-2018 DDI_RS10345 4cb04f3ca332b37cab6df0ab586ee137 320 SUPERFAMILY SSF49879 7 92 1.72E-11 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 DDI_RS10345 4cb04f3ca332b37cab6df0ab586ee137 320 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 5 95 1.0E-16 T 28-03-2018 IPR032030 YscD, cytoplasmic domain DDI_RS10345 4cb04f3ca332b37cab6df0ab586ee137 320 ProDom PD128471 PLASMID Y4YQ BLL1803 TRANSMEMBRANE MLR6347 MEMBRANE ID195 4 47 0.01 T 28-03-2018 DDI_RS10345 4cb04f3ca332b37cab6df0ab586ee137 320 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 200 318 6.5E-7 T 28-03-2018 IPR032034 Yop protein translocation protein D, periplasmic domain DDI_RS10345 4cb04f3ca332b37cab6df0ab586ee137 320 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 199 320 3.6E-26 T 28-03-2018 IPR012843 Type III secretion system YscD/HrpQ DDI_RS03695 2620f6c66bfa1782eada9bae87a4a99b 261 Gene3D G3DSA:3.30.2350.10 1 236 4.8E-61 T 28-03-2018 DDI_RS03695 2620f6c66bfa1782eada9bae87a4a99b 261 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS03695 2620f6c66bfa1782eada9bae87a4a99b 261 Pfam PF00849 RNA pseudouridylate synthase 10 170 1.4E-33 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS03695 2620f6c66bfa1782eada9bae87a4a99b 261 SUPERFAMILY SSF55120 2 237 1.92E-62 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS08795 d0c56f5c45a94a6ccae8865241422c6e 380 Pfam PF13487 HD domain 212 248 2.4E-5 T 28-03-2018 DDI_RS08795 d0c56f5c45a94a6ccae8865241422c6e 380 Pfam PF00072 Response regulator receiver domain 9 119 3.6E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS08795 d0c56f5c45a94a6ccae8865241422c6e 380 Gene3D G3DSA:3.40.50.2300 2 143 2.6E-25 T 28-03-2018 DDI_RS08795 d0c56f5c45a94a6ccae8865241422c6e 380 SUPERFAMILY SSF52172 7 136 2.56E-27 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS08795 d0c56f5c45a94a6ccae8865241422c6e 380 Gene3D G3DSA:1.10.3210.10 144 294 1.3E-5 T 28-03-2018 DDI_RS08795 d0c56f5c45a94a6ccae8865241422c6e 380 SMART SM00448 7 119 1.7E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 2.0E-73 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 2.0E-73 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 2.0E-73 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 2.0E-73 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 2.0E-73 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 2.0E-73 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 Gene3D G3DSA:3.40.190.80 196 331 5.9E-58 T 28-03-2018 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 28-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 PIRSF PIRSF500210 1 332 4.5E-126 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.701 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 PIRSF PIRSF000904 1 333 4.1E-123 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 1.6E-78 T 28-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 Gene3D G3DSA:3.30.540.10 1 195 1.1E-61 T 28-03-2018 DDI_RS17240 f863184d3af32ec11f677fc2670849d0 334 SUPERFAMILY SSF56655 2 328 8.12E-113 T 28-03-2018 DDI_RS16845 295185185d6a838a9b8c726c49e2dd7e 555 SUPERFAMILY SSF53850 118 550 1.65E-63 T 28-03-2018 DDI_RS16845 295185185d6a838a9b8c726c49e2dd7e 555 SUPERFAMILY SSF46785 5 56 5.75E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16845 295185185d6a838a9b8c726c49e2dd7e 555 Gene3D G3DSA:3.40.190.10 254 313 1.9E-7 T 28-03-2018 DDI_RS16845 295185185d6a838a9b8c726c49e2dd7e 555 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 2.8E-40 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DDI_RS16845 295185185d6a838a9b8c726c49e2dd7e 555 Gene3D G3DSA:1.10.10.10 5 89 2.3E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16845 295185185d6a838a9b8c726c49e2dd7e 555 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 307 1.5E-20 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS16845 295185185d6a838a9b8c726c49e2dd7e 555 Gene3D G3DSA:3.90.76.10 129 253 3.2E-19 T 28-03-2018 DDI_RS16300 6257b8d94c986f7ea321ebcbfb287820 335 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 10 331 1.2E-145 T 28-03-2018 IPR013399 CRISPR-associated protein Csy3 DDI_RS16300 6257b8d94c986f7ea321ebcbfb287820 335 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 9 334 1.5E-135 T 28-03-2018 IPR013399 CRISPR-associated protein Csy3 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 Gene3D G3DSA:3.40.50.2300 54 173 9.1E-31 T 28-03-2018 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 Gene3D G3DSA:3.40.50.2300 174 308 4.6E-42 T 28-03-2018 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.8E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.8E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.4E-35 T 28-03-2018 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 Gene3D G3DSA:1.10.260.40 16 53 2.7E-24 T 28-03-2018 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 SMART SM00354 1 71 1.2E-34 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 SUPERFAMILY SSF53822 61 330 3.34E-81 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 SUPERFAMILY SSF47413 1 58 1.41E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS04680 ad7c9465997cd58ecf7d9cd4e452a8c7 332 Gene3D G3DSA:1.10.10.60 2 15 0.034 T 28-03-2018 DDI_RS08980 dda97b422054f35306f86c0675714cd0 155 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 131 26.827 T 28-03-2018 IPR023006 Uncharacterised protein family UPF0225 DDI_RS08980 dda97b422054f35306f86c0675714cd0 155 SUPERFAMILY SSF103642 134 154 1.05E-7 T 28-03-2018 DDI_RS08980 dda97b422054f35306f86c0675714cd0 155 Gene3D G3DSA:3.10.450.50 3 134 1.1E-43 T 28-03-2018 DDI_RS08980 dda97b422054f35306f86c0675714cd0 155 Gene3D G3DSA:3.10.450.50 139 155 0.1 T 28-03-2018 DDI_RS08980 dda97b422054f35306f86c0675714cd0 155 SUPERFAMILY SSF54427 25 131 4.08E-35 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS08980 dda97b422054f35306f86c0675714cd0 155 Pfam PF02810 SEC-C motif 137 155 1.8E-10 T 28-03-2018 IPR004027 SEC-C motif DDI_RS17455 d6b08f2ed399f3eb706df32bdc2c2304 311 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 65 180 2.9E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS17455 d6b08f2ed399f3eb706df32bdc2c2304 311 Gene3D G3DSA:1.10.3720.10 24 290 9.3E-39 T 28-03-2018 DDI_RS17455 d6b08f2ed399f3eb706df32bdc2c2304 311 SUPERFAMILY SSF161098 64 271 8.37E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17455 d6b08f2ed399f3eb706df32bdc2c2304 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 283 2.3E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00345 5b85d047b3bf253dd90029efc5d6e5ab 79 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 6 47 1.9E-5 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DDI_RS00345 5b85d047b3bf253dd90029efc5d6e5ab 79 Gene3D G3DSA:3.90.1590.10 1 74 1.0E-11 T 28-03-2018 DDI_RS00345 5b85d047b3bf253dd90029efc5d6e5ab 79 SUPERFAMILY SSF51316 2 71 4.92E-15 T 28-03-2018 IPR011057 Mss4-like DDI_RS04960 928cc8ed7ad8a0f8ba0ce922643a7750 409 Pfam PF01047 MarR family 24 63 1.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS04960 928cc8ed7ad8a0f8ba0ce922643a7750 409 Pfam PF00480 ROK family 89 392 4.9E-85 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 DDI_RS04960 928cc8ed7ad8a0f8ba0ce922643a7750 409 Gene3D G3DSA:3.30.420.40 75 209 3.1E-21 T 28-03-2018 DDI_RS04960 928cc8ed7ad8a0f8ba0ce922643a7750 409 Gene3D G3DSA:3.30.420.40 210 404 1.1E-46 T 28-03-2018 DDI_RS04960 928cc8ed7ad8a0f8ba0ce922643a7750 409 SUPERFAMILY SSF53067 88 394 7.48E-55 T 28-03-2018 DDI_RS04960 928cc8ed7ad8a0f8ba0ce922643a7750 409 SUPERFAMILY SSF46785 14 79 1.64E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04960 928cc8ed7ad8a0f8ba0ce922643a7750 409 ProSitePatterns PS01125 ROK family signature. 220 247 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 DDI_RS04960 928cc8ed7ad8a0f8ba0ce922643a7750 409 Gene3D G3DSA:1.10.10.10 18 74 9.2E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03960 7ea8518c0c7c0a461f385336b2472840 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 1.7E-11 T 28-03-2018 IPR013987 PhnA protein, N-terminal DDI_RS03960 7ea8518c0c7c0a461f385336b2472840 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 113 1.7E-48 T 28-03-2018 IPR004624 PhnA protein DDI_RS03960 7ea8518c0c7c0a461f385336b2472840 113 Gene3D G3DSA:2.20.25.10 2 40 1.1E-14 T 28-03-2018 DDI_RS03960 7ea8518c0c7c0a461f385336b2472840 113 SUPERFAMILY SSF57783 3 34 5.27E-12 T 28-03-2018 DDI_RS03960 7ea8518c0c7c0a461f385336b2472840 113 Pfam PF03831 PhnA domain 46 113 2.5E-34 T 28-03-2018 IPR013988 PhnA protein, C-terminal DDI_RS03960 7ea8518c0c7c0a461f385336b2472840 113 Gene3D G3DSA:2.30.30.40 45 112 3.2E-37 T 28-03-2018 DDI_RS03960 7ea8518c0c7c0a461f385336b2472840 113 SUPERFAMILY SSF82057 41 112 4.44E-29 T 28-03-2018 DDI_RS06460 19a92e432fa2e9517a84ab7c592a6506 551 Gene3D G3DSA:3.40.1080.10 4 218 7.4E-34 T 28-03-2018 DDI_RS06460 19a92e432fa2e9517a84ab7c592a6506 551 Gene3D G3DSA:3.40.1080.10 232 527 2.4E-44 T 28-03-2018 DDI_RS06460 19a92e432fa2e9517a84ab7c592a6506 551 SUPERFAMILY SSF100950 232 489 6.05E-23 T 28-03-2018 DDI_RS06460 19a92e432fa2e9517a84ab7c592a6506 551 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 551 0.0 T 28-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 DDI_RS06460 19a92e432fa2e9517a84ab7c592a6506 551 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 11 551 4.3E-297 T 28-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 DDI_RS06460 19a92e432fa2e9517a84ab7c592a6506 551 SUPERFAMILY SSF100950 40 280 1.53E-36 T 28-03-2018 DDI_RS03075 d7c389b4ff27613aa34ce1a52782c512 299 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 160 294 6.0E-68 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DDI_RS03075 d7c389b4ff27613aa34ce1a52782c512 299 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 289 24.622 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 DDI_RS03075 d7c389b4ff27613aa34ce1a52782c512 299 SMART SM00771 157 287 3.4E-76 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DDI_RS03075 d7c389b4ff27613aa34ce1a52782c512 299 SUPERFAMILY SSF64383 158 290 2.35E-47 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DDI_RS03075 d7c389b4ff27613aa34ce1a52782c512 299 Gene3D G3DSA:3.30.1400.10 158 290 2.4E-52 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DDI_RS03075 d7c389b4ff27613aa34ce1a52782c512 299 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 287 1.7E-84 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 DDI_RS03075 d7c389b4ff27613aa34ce1a52782c512 299 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 160 286 2.4E-47 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DDI_RS19590 e6cea7ad6686060a6789ddca4deee931 394 Gene3D G3DSA:3.20.20.150 1 391 2.6E-110 T 28-03-2018 DDI_RS19590 e6cea7ad6686060a6789ddca4deee931 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 220.559 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DDI_RS19590 e6cea7ad6686060a6789ddca4deee931 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 393 1.4E-210 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DDI_RS19590 e6cea7ad6686060a6789ddca4deee931 394 PIRSF PIRSF016049 1 393 5.7E-180 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DDI_RS19590 e6cea7ad6686060a6789ddca4deee931 394 SUPERFAMILY SSF51658 1 383 7.75E-80 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS19590 e6cea7ad6686060a6789ddca4deee931 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.1E-153 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DDI_RS07230 f38731e9204a7d3de8e8c2b0d55a6fa5 387 Pfam PF12698 ABC-2 family transporter protein 40 379 2.9E-38 T 28-03-2018 DDI_RS07230 f38731e9204a7d3de8e8c2b0d55a6fa5 387 Gene3D G3DSA:3.40.1710.10 55 206 1.6E-24 T 28-03-2018 DDI_RS10470 b040b6b4b6ef605ab0bb2ed0c89295f8 343 Pfam PF13416 Bacterial extracellular solute-binding protein 43 306 1.8E-39 T 28-03-2018 DDI_RS10470 b040b6b4b6ef605ab0bb2ed0c89295f8 343 Gene3D G3DSA:3.40.190.10 20 136 7.6E-14 T 28-03-2018 DDI_RS10470 b040b6b4b6ef605ab0bb2ed0c89295f8 343 Gene3D G3DSA:3.40.190.10 137 295 4.3E-32 T 28-03-2018 DDI_RS10470 b040b6b4b6ef605ab0bb2ed0c89295f8 343 SUPERFAMILY SSF53850 23 339 2.36E-65 T 28-03-2018 DDI_RS21030 52968d5595a01a03dde5a703c478e430 518 Gene3D G3DSA:3.40.190.10 152 285 6.1E-44 T 28-03-2018 DDI_RS21030 52968d5595a01a03dde5a703c478e430 518 SUPERFAMILY SSF53850 30 517 2.87E-133 T 28-03-2018 DDI_RS21030 52968d5595a01a03dde5a703c478e430 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 433 8.3E-91 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS21030 52968d5595a01a03dde5a703c478e430 518 Gene3D G3DSA:3.90.76.10 47 151 5.3E-26 T 28-03-2018 DDI_RS21030 52968d5595a01a03dde5a703c478e430 518 PIRSF PIRSF002741 22 517 1.3E-101 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS21030 52968d5595a01a03dde5a703c478e430 518 Gene3D G3DSA:3.10.105.10 286 488 2.7E-53 T 28-03-2018 DDI_RS08225 fb4fc2eb45746a8ad97aa57f2d629c13 196 Pfam PF00117 Glutamine amidotransferase class-I 36 194 1.6E-18 T 28-03-2018 IPR017926 Glutamine amidotransferase DDI_RS08225 fb4fc2eb45746a8ad97aa57f2d629c13 196 Gene3D G3DSA:3.40.50.880 1 196 2.5E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS08225 fb4fc2eb45746a8ad97aa57f2d629c13 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 3.2E-69 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DDI_RS08225 fb4fc2eb45746a8ad97aa57f2d629c13 196 SUPERFAMILY SSF52317 3 195 1.99E-53 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS08225 fb4fc2eb45746a8ad97aa57f2d629c13 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.098 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DDI_RS08225 fb4fc2eb45746a8ad97aa57f2d629c13 196 PIRSF PIRSF000495 1 196 1.3E-63 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DDI_RS08225 fb4fc2eb45746a8ad97aa57f2d629c13 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 28-03-2018 DDI_RS08225 fb4fc2eb45746a8ad97aa57f2d629c13 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 28-03-2018 DDI_RS06570 3ad8c7b6160440a0cbda7ad09a138ce7 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 474 4.4E-97 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 DDI_RS06570 3ad8c7b6160440a0cbda7ad09a138ce7 492 Gene3D G3DSA:1.20.1600.10 19 480 6.4E-94 T 28-03-2018 DDI_RS06570 3ad8c7b6160440a0cbda7ad09a138ce7 492 Pfam PF02321 Outer membrane efflux protein 293 463 2.0E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS06570 3ad8c7b6160440a0cbda7ad09a138ce7 492 Pfam PF02321 Outer membrane efflux protein 66 261 2.1E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS06570 3ad8c7b6160440a0cbda7ad09a138ce7 492 SUPERFAMILY SSF56954 3 29 4.19E-101 T 28-03-2018 DDI_RS06570 3ad8c7b6160440a0cbda7ad09a138ce7 492 SUPERFAMILY SSF56954 56 477 4.19E-101 T 28-03-2018 DDI_RS13765 c43f57ef8cfcc9bc616ced7ccab26e1a 181 Gene3D G3DSA:2.10.70.20 134 180 5.1E-10 T 28-03-2018 DDI_RS13765 c43f57ef8cfcc9bc616ced7ccab26e1a 181 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13765 c43f57ef8cfcc9bc616ced7ccab26e1a 181 SUPERFAMILY SSF54523 44 179 1.02E-20 T 28-03-2018 DDI_RS13765 c43f57ef8cfcc9bc616ced7ccab26e1a 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.9E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13765 c43f57ef8cfcc9bc616ced7ccab26e1a 181 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.7E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13765 c43f57ef8cfcc9bc616ced7ccab26e1a 181 Pfam PF11612 Type II secretion system (T2SS), protein J 83 174 9.9E-11 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 DDI_RS02670 b86cbdfdef4b4fe3f836d715269c7174 534 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 515 7.0E-102 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 DDI_RS02670 b86cbdfdef4b4fe3f836d715269c7174 534 Pfam PF07690 Major Facilitator Superfamily 23 417 2.7E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS02670 b86cbdfdef4b4fe3f836d715269c7174 534 SUPERFAMILY SSF103473 9 201 7.85E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS02670 b86cbdfdef4b4fe3f836d715269c7174 534 SUPERFAMILY SSF103473 492 519 7.85E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS02670 b86cbdfdef4b4fe3f836d715269c7174 534 SUPERFAMILY SSF103473 256 427 7.85E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS02670 b86cbdfdef4b4fe3f836d715269c7174 534 Gene3D G3DSA:1.20.1250.20 260 524 1.2E-28 T 28-03-2018 DDI_RS02670 b86cbdfdef4b4fe3f836d715269c7174 534 Gene3D G3DSA:1.20.1250.20 8 208 4.1E-33 T 28-03-2018 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 SUPERFAMILY SSF55874 222 388 1.7E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 SMART SM00304 114 168 5.0E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 SUPERFAMILY SSF47384 152 234 1.31E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 SMART SM00387 278 389 2.1E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 SMART SM00388 170 233 3.1E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 Gene3D G3DSA:1.10.287.130 159 215 2.1E-9 T 28-03-2018 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 2.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 387 2.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 2.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 2.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 Pfam PF00512 His Kinase A (phospho-acceptor) domain 177 229 1.3E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 Gene3D G3DSA:3.30.565.10 216 389 5.2E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS03275 58cd6a4045cbff1a832db46588b52111 389 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 387 1.6E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS12635 3f932e74694b94806aa76def72119db7 338 Gene3D G3DSA:3.30.70.20 52 130 5.5E-13 T 28-03-2018 DDI_RS12635 3f932e74694b94806aa76def72119db7 338 Gene3D G3DSA:3.30.70.20 131 173 4.7E-17 T 28-03-2018 DDI_RS12635 3f932e74694b94806aa76def72119db7 338 Gene3D G3DSA:3.30.70.20 174 331 4.0E-15 T 28-03-2018 DDI_RS12635 3f932e74694b94806aa76def72119db7 338 Gene3D G3DSA:3.30.70.20 32 51 0.035 T 28-03-2018 DDI_RS12635 3f932e74694b94806aa76def72119db7 338 Pfam PF13247 4Fe-4S dicluster domain 111 211 4.1E-22 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS12635 3f932e74694b94806aa76def72119db7 338 SUPERFAMILY SSF54862 37 327 1.42E-66 T 28-03-2018 DDI_RS12635 3f932e74694b94806aa76def72119db7 338 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS12495 35019c1a3150254a393faa3954c02327 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 292 7.6E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12495 35019c1a3150254a393faa3954c02327 308 SUPERFAMILY SSF161098 110 293 2.09E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12495 35019c1a3150254a393faa3954c02327 308 Gene3D G3DSA:1.10.3720.10 55 308 9.8E-30 T 28-03-2018 DDI_RS12495 35019c1a3150254a393faa3954c02327 308 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 100 294 4.3E-72 T 28-03-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 Gene3D G3DSA:3.90.230.10 1 262 5.2E-86 T 28-03-2018 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 4.0E-107 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 SUPERFAMILY SSF55920 3 255 4.97E-89 T 28-03-2018 IPR000994 Peptidase M24 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.931 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 5.5E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 5.5E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 5.5E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 5.5E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDI_RS03720 cdf4ab64d80c3ea0431aad1566252e3a 264 Pfam PF00557 Metallopeptidase family M24 12 242 4.2E-51 T 28-03-2018 IPR000994 Peptidase M24 DDI_RS21095 469744df5ad419f4df27bdd66330b66f 55 SUPERFAMILY SSF57829 1 53 4.58E-20 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DDI_RS21095 469744df5ad419f4df27bdd66330b66f 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS21095 469744df5ad419f4df27bdd66330b66f 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 6.8E-27 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21095 469744df5ad419f4df27bdd66330b66f 55 Pfam PF00471 Ribosomal protein L33 7 53 4.8E-19 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21095 469744df5ad419f4df27bdd66330b66f 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 Gene3D G3DSA:1.10.3860.10 1 408 3.5E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 2.8E-110 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 SUPERFAMILY SSF118215 9 401 1.7E-120 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 2.5E-29 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 2.5E-29 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 2.5E-29 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 2.5E-29 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 2.5E-29 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 2.5E-29 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS19455 a31b255e4cd30a9490ee90eac01dcbb7 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.438 T 28-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 DDI_RS08470 158edd916d395e547017e7dc177ea6a5 443 SUPERFAMILY SSF52540 51 156 7.55E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08470 158edd916d395e547017e7dc177ea6a5 443 SUPERFAMILY SSF52540 265 408 7.55E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08470 158edd916d395e547017e7dc177ea6a5 443 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 209 376 1.0E-12 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS08470 158edd916d395e547017e7dc177ea6a5 443 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 51 158 3.9E-12 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS08470 158edd916d395e547017e7dc177ea6a5 443 Gene3D G3DSA:3.40.50.300 1 417 1.6E-15 T 28-03-2018 DDI_RS03950 0688530c2b08b64a88260c04181539f7 587 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 40 297 6.4E-62 T 28-03-2018 IPR007817 Pyoverdine biosynthesis DDI_RS03950 0688530c2b08b64a88260c04181539f7 587 SUPERFAMILY SSF51197 347 586 3.48E-38 T 28-03-2018 DDI_RS03950 0688530c2b08b64a88260c04181539f7 587 Gene3D G3DSA:3.60.130.10 303 587 2.9E-40 T 28-03-2018 DDI_RS03950 0688530c2b08b64a88260c04181539f7 587 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 329 584 1.3E-32 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 5.1E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 Gene3D G3DSA:1.10.10.10 1 86 9.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 Gene3D G3DSA:3.40.190.10 176 268 4.3E-12 T 28-03-2018 DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 Pfam PF03466 LysR substrate binding domain 94 291 1.7E-20 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 SUPERFAMILY SSF46785 2 84 1.99E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS05810 ed1949e628fa9ad34b445e1fe017f31d 297 SUPERFAMILY SSF53850 93 293 7.24E-22 T 28-03-2018 DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 SUPERFAMILY SSF54534 225 357 1.96E-25 T 28-03-2018 DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 SUPERFAMILY SSF109998 203 240 3.81E-35 T 28-03-2018 IPR027304 Trigger factor/SurA domain DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 SUPERFAMILY SSF109998 40 169 3.81E-35 T 28-03-2018 IPR027304 Trigger factor/SurA domain DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 Gene3D G3DSA:1.10.4030.10 37 170 2.3E-23 T 28-03-2018 DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 Pfam PF13624 SurA N-terminal domain 1 165 2.7E-47 T 28-03-2018 DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 Gene3D G3DSA:3.10.50.40 383 498 6.4E-10 T 28-03-2018 DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 Gene3D G3DSA:3.10.50.40 220 382 5.2E-31 T 28-03-2018 DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 297 318 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 Pfam PF13145 PPIC-type PPIASE domain 249 370 8.7E-21 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 DDI_RS04300 e16b81270ca5c7ac0a986a10fae285c1 626 Pfam PF13145 PPIC-type PPIASE domain 390 486 2.6E-7 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 DDI_RS17750 50b4194962304d13ca4c16e58bb29c97 304 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 283 6.1E-89 T 28-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DDI_RS17750 50b4194962304d13ca4c16e58bb29c97 304 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 286 48.22 T 28-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DDI_RS17750 50b4194962304d13ca4c16e58bb29c97 304 Pfam PF02666 Phosphatidylserine decarboxylase 63 283 7.8E-55 T 28-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DDI_RS02740 f30b0820f2bed9ab88157ca6ed0a85cc 129 Gene3D G3DSA:3.10.180.10 3 126 3.7E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS02740 f30b0820f2bed9ab88157ca6ed0a85cc 129 SUPERFAMILY SSF54593 4 122 4.26E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS02740 f30b0820f2bed9ab88157ca6ed0a85cc 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 117 3.0E-6 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DDI_RS15485 dc1ea7e3a05c320c1b5fc956a2d91da2 324 Gene3D G3DSA:3.60.15.10 24 322 3.4E-56 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS15485 dc1ea7e3a05c320c1b5fc956a2d91da2 324 SMART SM00849 85 290 8.2E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS15485 dc1ea7e3a05c320c1b5fc956a2d91da2 324 Pfam PF00753 Metallo-beta-lactamase superfamily 84 276 1.0E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS15485 dc1ea7e3a05c320c1b5fc956a2d91da2 324 SUPERFAMILY SSF56281 31 301 9.3E-55 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 SUPERFAMILY SSF53807 43 315 2.85E-92 T 28-03-2018 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 Gene3D G3DSA:3.40.50.1980 193 315 1.1E-33 T 28-03-2018 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 Gene3D G3DSA:3.40.50.1980 47 192 1.1E-47 T 28-03-2018 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 Pfam PF01297 Zinc-uptake complex component A periplasmic 49 312 5.7E-79 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00690 Adhesin family signature 77 90 1.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00690 Adhesin family signature 280 299 1.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00690 Adhesin family signature 90 107 1.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00690 Adhesin family signature 254 272 1.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00690 Adhesin family signature 201 222 1.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00690 Adhesin family signature 46 64 1.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00691 Adhesin B signature 293 311 9.2E-39 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00691 Adhesin B signature 250 267 9.2E-39 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00691 Adhesin B signature 201 218 9.2E-39 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00691 Adhesin B signature 227 245 9.2E-39 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00691 Adhesin B signature 272 290 9.2E-39 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00691 Adhesin B signature 46 67 9.2E-39 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00691 Adhesin B signature 71 89 9.2E-39 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS06520 4996f79e70644e72dcf1c79f0b1326ef 316 PRINTS PR00691 Adhesin B signature 90 109 9.2E-39 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS04800 e1dde9d53bd3ad910785056b54012845 321 SUPERFAMILY SSF102114 54 315 1.57E-67 T 28-03-2018 DDI_RS04800 e1dde9d53bd3ad910785056b54012845 321 PIRSF PIRSF005963 2 320 3.5E-131 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDI_RS04800 e1dde9d53bd3ad910785056b54012845 321 Pfam PF04055 Radical SAM superfamily 91 251 7.8E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS04800 e1dde9d53bd3ad910785056b54012845 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.733 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDI_RS04800 e1dde9d53bd3ad910785056b54012845 321 Gene3D G3DSA:3.20.20.70 20 303 2.4E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS04800 e1dde9d53bd3ad910785056b54012845 321 SMART SM00729 84 293 2.9E-13 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 DDI_RS04800 e1dde9d53bd3ad910785056b54012845 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.4E-158 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDI_RS04800 e1dde9d53bd3ad910785056b54012845 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 73 6.0E-7 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDI_RS01990 3469191faa7966e13bb4b75365fbb3a2 369 Gene3D G3DSA:2.30.300.10 271 360 0.094 T 28-03-2018 DDI_RS01990 3469191faa7966e13bb4b75365fbb3a2 369 Pfam PF05954 Phage late control gene D protein (GPD) 46 350 2.1E-36 T 28-03-2018 DDI_RS01990 3469191faa7966e13bb4b75365fbb3a2 369 SUPERFAMILY SSF69279 15 188 1.13E-29 T 28-03-2018 DDI_RS01990 3469191faa7966e13bb4b75365fbb3a2 369 Gene3D G3DSA:3.55.50.10 112 224 5.8E-8 T 28-03-2018 DDI_RS08640 a7b79d233120d510d84aee15d4ae6e0a 323 Gene3D G3DSA:3.40.50.150 73 323 1.6E-21 T 28-03-2018 DDI_RS08640 a7b79d233120d510d84aee15d4ae6e0a 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 53.91 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 DDI_RS08640 a7b79d233120d510d84aee15d4ae6e0a 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 9.5E-147 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 DDI_RS08640 a7b79d233120d510d84aee15d4ae6e0a 323 SUPERFAMILY SSF53335 88 315 1.14E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS08640 a7b79d233120d510d84aee15d4ae6e0a 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.0E-165 T 28-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like DDI_RS13070 2e807b8f53e4764495a361563fe76441 735 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 81 733 2.7E-129 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 DDI_RS13070 2e807b8f53e4764495a361563fe76441 735 Gene3D G3DSA:2.170.130.10 35 189 3.0E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS13070 2e807b8f53e4764495a361563fe76441 735 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 181 6.8E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS13070 2e807b8f53e4764495a361563fe76441 735 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 52 - T 28-03-2018 IPR010916 TonB box, conserved site DDI_RS13070 2e807b8f53e4764495a361563fe76441 735 SUPERFAMILY SSF56935 35 735 1.12E-132 T 28-03-2018 DDI_RS13070 2e807b8f53e4764495a361563fe76441 735 Gene3D G3DSA:2.40.170.20 195 735 2.9E-79 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS13070 2e807b8f53e4764495a361563fe76441 735 Pfam PF00593 TonB dependent receptor 263 734 9.0E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 SUPERFAMILY SSF52540 298 547 2.36E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 SUPERFAMILY SSF52540 5 254 4.75E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 Gene3D G3DSA:3.40.50.300 294 588 1.4E-72 T 28-03-2018 DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 Gene3D G3DSA:3.40.50.300 2 274 6.2E-62 T 28-03-2018 DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 SMART SM00382 34 233 5.5E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 SMART SM00382 333 525 7.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 267 2.5E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 527 566 7.3E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 Pfam PF00005 ABC transporter 26 183 3.3E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06445 6fcc79f16ba32315f60dff40bef0ec0c 597 Pfam PF00005 ABC transporter 325 475 2.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS19450 60db2407f1d49bcc22e0f8482e6a4cae 485 Pfam PF05193 Peptidase M16 inactive domain 199 376 1.2E-13 T 28-03-2018 IPR007863 Peptidase M16, C-terminal DDI_RS19450 60db2407f1d49bcc22e0f8482e6a4cae 485 Pfam PF00675 Insulinase (Peptidase family M16) 51 158 2.2E-10 T 28-03-2018 IPR011765 Peptidase M16, N-terminal DDI_RS19450 60db2407f1d49bcc22e0f8482e6a4cae 485 Gene3D G3DSA:3.30.830.10 256 472 1.3E-23 T 28-03-2018 DDI_RS19450 60db2407f1d49bcc22e0f8482e6a4cae 485 Gene3D G3DSA:3.30.830.10 15 249 7.8E-29 T 28-03-2018 DDI_RS19450 60db2407f1d49bcc22e0f8482e6a4cae 485 SUPERFAMILY SSF63411 29 239 6.6E-24 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDI_RS12265 53f20078647a1051e1da79a19e1b2126 235 SUPERFAMILY SSF56214 112 186 2.62E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS12265 53f20078647a1051e1da79a19e1b2126 235 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 113 195 1.9E-11 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS12265 53f20078647a1051e1da79a19e1b2126 235 Gene3D G3DSA:3.90.470.20 24 122 5.3E-15 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS12265 53f20078647a1051e1da79a19e1b2126 235 PRINTS PR01399 Enterobactin synthetase component D signature 79 97 2.7E-19 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DDI_RS12265 53f20078647a1051e1da79a19e1b2126 235 PRINTS PR01399 Enterobactin synthetase component D signature 49 69 2.7E-19 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DDI_RS12265 53f20078647a1051e1da79a19e1b2126 235 PRINTS PR01399 Enterobactin synthetase component D signature 156 172 2.7E-19 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DDI_RS12265 53f20078647a1051e1da79a19e1b2126 235 Gene3D G3DSA:3.90.470.20 123 227 6.7E-8 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 SUPERFAMILY SSF57783 4 100 7.31E-35 T 28-03-2018 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 1.7E-41 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Gene3D G3DSA:1.10.860.10 434 583 1.0E-32 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Gene3D G3DSA:3.40.1360.20 256 369 1.9E-32 T 28-03-2018 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Gene3D G3DSA:1.20.50.20 370 417 2.8E-20 T 28-03-2018 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 SMART SM00400 36 90 1.0E-37 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 PIRSF PIRSF002811 2 583 1.2E-143 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 SMART SM00766 450 577 1.1E-44 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Pfam PF08278 DNA primase DnaG DnaB-binding 451 576 4.2E-30 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Pfam PF13155 Toprim-like 263 348 4.0E-14 T 28-03-2018 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Pfam PF01807 CHC2 zinc finger 7 100 3.8E-40 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Gene3D G3DSA:3.90.980.10 109 240 1.1E-45 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 2.5E-149 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Pfam PF10410 DnaB-helicase binding domain of primase 369 424 9.6E-13 T 28-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 SMART SM00493 259 330 9.5E-22 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Gene3D G3DSA:3.90.580.10 1 102 4.4E-34 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 SUPERFAMILY SSF56731 115 427 2.27E-114 T 28-03-2018 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 SUPERFAMILY SSF117023 447 579 4.71E-37 T 28-03-2018 DDI_RS02020 104ff721494ff8bac35d4e869afa530d 584 Hamap MF_00974 DNA primase [dnaG]. 4 578 30.095 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DDI_RS12175 9c6fccf9a332c74cf3dc634279b2aa11 376 SUPERFAMILY SSF103088 152 261 2.88E-17 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS12175 9c6fccf9a332c74cf3dc634279b2aa11 376 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 63 9.9E-20 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain DDI_RS12175 9c6fccf9a332c74cf3dc634279b2aa11 376 Pfam PF00691 OmpA family 156 251 5.1E-12 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS12175 9c6fccf9a332c74cf3dc634279b2aa11 376 Gene3D G3DSA:3.30.1330.60 103 292 1.6E-36 T 28-03-2018 IPR006665 OmpA-like domain DDI_RS05970 74317e3817fa72b36860210866d6fd8a 242 SUPERFAMILY SSF53681 9 116 7.41E-28 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS05970 74317e3817fa72b36860210866d6fd8a 242 Gene3D G3DSA:3.40.50.1860 131 223 1.2E-13 T 28-03-2018 DDI_RS05970 74317e3817fa72b36860210866d6fd8a 242 TIGRFAM TIGR00035 asp_race: aspartate racemase 8 234 4.5E-42 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 DDI_RS05970 74317e3817fa72b36860210866d6fd8a 242 Gene3D G3DSA:3.40.50.1860 6 130 4.1E-32 T 28-03-2018 DDI_RS05970 74317e3817fa72b36860210866d6fd8a 242 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 233 1.1E-52 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS05970 74317e3817fa72b36860210866d6fd8a 242 SUPERFAMILY SSF53681 127 235 2.62E-18 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS17500 df291b5eac3361e97d10a4db23d52c54 181 Pfam PF04891 NifQ 7 168 3.9E-47 T 28-03-2018 IPR006975 NifQ GO:0009399|GO:0030151 DDI_RS10555 0b84444afb4ae1f822b0f889a1b8b236 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 2.8E-118 T 28-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 DDI_RS10555 0b84444afb4ae1f822b0f889a1b8b236 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 1.3E-80 T 28-03-2018 IPR023234 NarG-like domain DDI_RS10555 0b84444afb4ae1f822b0f889a1b8b236 225 SUPERFAMILY SSF103501 1 224 8.89E-70 T 28-03-2018 IPR023234 NarG-like domain DDI_RS10555 0b84444afb4ae1f822b0f889a1b8b236 225 Gene3D G3DSA:1.20.950.20 1 216 7.7E-43 T 28-03-2018 DDI_RS15140 05782c41a351fa60f696c03fbb95db73 180 Pfam PF03079 ARD/ARD' family 11 165 1.2E-34 T 28-03-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 DDI_RS15140 05782c41a351fa60f696c03fbb95db73 180 Gene3D G3DSA:2.60.120.10 2 157 2.4E-40 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS15140 05782c41a351fa60f696c03fbb95db73 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.979 T 28-03-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 DDI_RS15140 05782c41a351fa60f696c03fbb95db73 180 SUPERFAMILY SSF51182 4 178 4.8E-42 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 6.3E-62 T 28-03-2018 IPR023214 HAD-like domain DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 5.1E-5 T 28-03-2018 DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 5.1E-5 T 28-03-2018 DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 5.1E-5 T 28-03-2018 DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 28-03-2018 DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 SUPERFAMILY SSF56784 1 271 5.89E-66 T 28-03-2018 IPR023214 HAD-like domain DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 Gene3D G3DSA:3.40.50.1000 1 273 2.0E-41 T 28-03-2018 IPR023214 HAD-like domain DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 240 1.2E-23 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DDI_RS05290 25114be5a783a39a51f5a3588ae38fb8 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 2.0E-64 T 28-03-2018 IPR000150 Cof family GO:0016787 DDI_RS16875 52ad76c53e27dbfada8201be7f860355 97 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 16 79 5.0E-16 T 28-03-2018 DDI_RS16875 52ad76c53e27dbfada8201be7f860355 97 SUPERFAMILY SSF55021 10 82 8.94E-16 T 28-03-2018 DDI_RS16875 52ad76c53e27dbfada8201be7f860355 97 Gene3D G3DSA:3.30.70.260 2 97 3.5E-18 T 28-03-2018 DDI_RS16875 52ad76c53e27dbfada8201be7f860355 97 Pfam PF01842 ACT domain 11 74 3.6E-9 T 28-03-2018 IPR002912 ACT domain DDI_RS02530 26ade9e336b2abbd329f17f529dfdcc7 627 Gene3D G3DSA:3.40.50.720 277 615 1.0E-62 T 28-03-2018 DDI_RS02530 26ade9e336b2abbd329f17f529dfdcc7 627 SUPERFAMILY SSF51735 281 556 3.38E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02530 26ade9e336b2abbd329f17f529dfdcc7 627 SUPERFAMILY SSF53335 111 326 2.16E-13 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS02530 26ade9e336b2abbd329f17f529dfdcc7 627 Pfam PF02719 Polysaccharide biosynthesis protein 284 578 8.6E-125 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DDI_RS02530 26ade9e336b2abbd329f17f529dfdcc7 627 Gene3D G3DSA:3.40.50.720 141 265 3.2E-14 T 28-03-2018 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 Gene3D G3DSA:3.40.50.150 155 437 1.5E-61 T 28-03-2018 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 260 266 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 318 2.9E-21 T 28-03-2018 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 157 173 2.9E-21 T 28-03-2018 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 257 269 2.9E-21 T 28-03-2018 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 199 2.9E-21 T 28-03-2018 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 72 440 1.2E-75 T 28-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 Pfam PF12161 HsdM N-terminal domain 8 120 1.0E-17 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 Pfam PF02384 N-6 DNA Methylase 134 439 3.2E-103 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DDI_RS03460 9a669c0e044da20f3509c226b291e66f 811 SUPERFAMILY SSF53335 7 480 4.94E-129 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS13755 a7ebf482999b3b2a157352d6f1d02904 139 SUPERFAMILY SSF54523 39 138 5.23E-31 T 28-03-2018 DDI_RS13755 a7ebf482999b3b2a157352d6f1d02904 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 4.0E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS13755 a7ebf482999b3b2a157352d6f1d02904 139 Pfam PF08334 Type II secretion system (T2SS), protein G 35 137 1.0E-32 T 28-03-2018 IPR013545 Type II secretion system protein G DDI_RS13755 a7ebf482999b3b2a157352d6f1d02904 139 Gene3D G3DSA:3.30.700.10 26 137 1.4E-27 T 28-03-2018 DDI_RS13755 a7ebf482999b3b2a157352d6f1d02904 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 5.5E-18 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DDI_RS13755 a7ebf482999b3b2a157352d6f1d02904 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 5.5E-18 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DDI_RS13755 a7ebf482999b3b2a157352d6f1d02904 139 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 11 137 9.1E-45 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 DDI_RS13755 a7ebf482999b3b2a157352d6f1d02904 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 2.8E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS20690 a02eed1c59074d755b299805696b4689 166 SUPERFAMILY SSF46785 12 162 5.37E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20690 a02eed1c59074d755b299805696b4689 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.3E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20690 a02eed1c59074d755b299805696b4689 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.3E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20690 a02eed1c59074d755b299805696b4689 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.3E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20690 a02eed1c59074d755b299805696b4689 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.3E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20690 a02eed1c59074d755b299805696b4689 166 SMART SM00347 45 148 6.3E-32 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20690 a02eed1c59074d755b299805696b4689 166 Pfam PF01047 MarR family 52 113 4.4E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS20690 a02eed1c59074d755b299805696b4689 166 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DDI_RS20690 a02eed1c59074d755b299805696b4689 166 Gene3D G3DSA:1.10.10.10 2 166 1.4E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00100 49aa9a171c48d9e494671be7c3c5694c 153 Gene3D G3DSA:2.40.50.100 4 153 1.0E-20 T 28-03-2018 DDI_RS00100 49aa9a171c48d9e494671be7c3c5694c 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.8E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDI_RS00100 49aa9a171c48d9e494671be7c3c5694c 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.8E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDI_RS00100 49aa9a171c48d9e494671be7c3c5694c 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.8E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDI_RS00100 49aa9a171c48d9e494671be7c3c5694c 153 Pfam PF00364 Biotin-requiring enzyme 79 152 1.2E-25 T 28-03-2018 IPR000089 Biotin/lipoyl attachment DDI_RS00100 49aa9a171c48d9e494671be7c3c5694c 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDI_RS00100 49aa9a171c48d9e494671be7c3c5694c 153 SUPERFAMILY SSF51230 78 153 2.62E-26 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS00100 49aa9a171c48d9e494671be7c3c5694c 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 5.4E-67 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDI_RS05435 760da1f2261d46959d40c6134dcc2bc5 335 SUPERFAMILY SSF51735 1 333 1.28E-87 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05435 760da1f2261d46959d40c6134dcc2bc5 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.2E-29 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 DDI_RS05435 760da1f2261d46959d40c6134dcc2bc5 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.2E-29 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 DDI_RS05435 760da1f2261d46959d40c6134dcc2bc5 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 2.2E-29 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 DDI_RS05435 760da1f2261d46959d40c6134dcc2bc5 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.2E-29 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 DDI_RS05435 760da1f2261d46959d40c6134dcc2bc5 335 Gene3D G3DSA:3.90.25.10 191 335 3.2E-37 T 28-03-2018 DDI_RS05435 760da1f2261d46959d40c6134dcc2bc5 335 Gene3D G3DSA:3.40.50.720 2 190 1.8E-35 T 28-03-2018 DDI_RS05435 760da1f2261d46959d40c6134dcc2bc5 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 236 3.3E-56 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS17555 ab2e5e7da5af2a468e5bd013817a730a 414 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 16 395 4.3E-182 T 28-03-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 DDI_RS17555 ab2e5e7da5af2a468e5bd013817a730a 414 SUPERFAMILY SSF53383 15 387 3.55E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS17555 ab2e5e7da5af2a468e5bd013817a730a 414 Gene3D G3DSA:3.90.1150.10 276 393 4.1E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS17555 ab2e5e7da5af2a468e5bd013817a730a 414 Pfam PF00266 Aminotransferase class-V 16 378 1.5E-88 T 28-03-2018 IPR000192 Aminotransferase class V domain DDI_RS17555 ab2e5e7da5af2a468e5bd013817a730a 414 Gene3D G3DSA:3.40.640.10 24 268 2.5E-59 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS17555 ab2e5e7da5af2a468e5bd013817a730a 414 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 205 224 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DDI_RS17555 ab2e5e7da5af2a468e5bd013817a730a 414 PIRSF PIRSF005572 13 393 9.1E-123 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 DDI_RS02910 50eae9c37faaddb6bee87c70bdc5e2f8 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 71.268 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 DDI_RS02910 50eae9c37faaddb6bee87c70bdc5e2f8 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 7.1E-53 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 DDI_RS02910 50eae9c37faaddb6bee87c70bdc5e2f8 160 SUPERFAMILY SSF74982 8 138 3.27E-49 T 28-03-2018 IPR023620 Small protein B DDI_RS02910 50eae9c37faaddb6bee87c70bdc5e2f8 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-56 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 DDI_RS02910 50eae9c37faaddb6bee87c70bdc5e2f8 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site DDI_RS02910 50eae9c37faaddb6bee87c70bdc5e2f8 160 Pfam PF01668 SmpB protein 14 157 8.2E-56 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 DDI_RS02910 50eae9c37faaddb6bee87c70bdc5e2f8 160 Gene3D G3DSA:2.40.280.10 14 133 5.2E-44 T 28-03-2018 IPR023620 Small protein B DDI_RS20125 a4c55c9f36236617ff38c3d2fca43e43 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS20125 a4c55c9f36236617ff38c3d2fca43e43 409 Gene3D G3DSA:3.40.47.10 262 409 7.5E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20125 a4c55c9f36236617ff38c3d2fca43e43 409 SUPERFAMILY SSF53901 214 408 3.73E-60 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20125 a4c55c9f36236617ff38c3d2fca43e43 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 363 9.4E-29 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS20125 a4c55c9f36236617ff38c3d2fca43e43 409 SUPERFAMILY SSF53901 1 253 6.31E-57 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20125 a4c55c9f36236617ff38c3d2fca43e43 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 2.0E-43 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS20125 a4c55c9f36236617ff38c3d2fca43e43 409 Gene3D G3DSA:3.40.47.10 4 259 3.7E-56 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20125 a4c55c9f36236617ff38c3d2fca43e43 409 SMART SM00825 Beta-ketoacyl synthase 4 409 4.4E-12 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 Gene3D G3DSA:3.40.50.300 322 571 4.8E-60 T 28-03-2018 DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 Gene3D G3DSA:1.20.1560.10 6 317 1.0E-22 T 28-03-2018 DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 SUPERFAMILY SSF90123 9 317 5.62E-43 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 Pfam PF00664 ABC transporter transmembrane region 26 279 3.5E-14 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 15 556 9.7E-250 T 28-03-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 SMART SM00382 356 550 5.3E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 SUPERFAMILY SSF52540 322 553 9.25E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09420 b113559735743a74a2612a8fd5010da0 575 Pfam PF00005 ABC transporter 347 494 3.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS05950 5f5d139227d5372dd7cb2374cec8f565 285 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS05950 5f5d139227d5372dd7cb2374cec8f565 285 SMART SM00382 40 221 4.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05950 5f5d139227d5372dd7cb2374cec8f565 285 SUPERFAMILY SSF52540 11 224 9.94E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05950 5f5d139227d5372dd7cb2374cec8f565 285 Pfam PF00005 ABC transporter 32 173 1.6E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS05950 5f5d139227d5372dd7cb2374cec8f565 285 Gene3D G3DSA:3.40.50.300 8 248 2.2E-58 T 28-03-2018 DDI_RS03830 695dcfd1294ccb1660b35ef57bf217bc 182 PIRSF PIRSF011484 1 181 4.7E-69 T 28-03-2018 IPR009822 YaeQ DDI_RS03830 695dcfd1294ccb1660b35ef57bf217bc 182 SUPERFAMILY SSF52980 4 178 5.63E-71 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDI_RS03830 695dcfd1294ccb1660b35ef57bf217bc 182 Pfam PF07152 YaeQ protein 1 173 1.3E-74 T 28-03-2018 IPR009822 YaeQ DDI_RS03830 695dcfd1294ccb1660b35ef57bf217bc 182 SMART SM01322 1 176 1.5E-115 T 28-03-2018 IPR009822 YaeQ DDI_RS03830 695dcfd1294ccb1660b35ef57bf217bc 182 Gene3D G3DSA:3.10.640.10 2 177 4.7E-76 T 28-03-2018 DDI_RS12535 1b3c6b10f6c886a783e963239c6714d5 327 Gene3D G3DSA:3.40.50.1820 27 310 2.7E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS12535 1b3c6b10f6c886a783e963239c6714d5 327 Pfam PF07859 alpha/beta hydrolase fold 65 286 7.8E-17 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 DDI_RS12535 1b3c6b10f6c886a783e963239c6714d5 327 SUPERFAMILY SSF53474 50 306 1.83E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS13155 7d4cdd149367b7227ca26582f159870f 408 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 405 1.3E-160 T 28-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 DDI_RS13155 7d4cdd149367b7227ca26582f159870f 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 3.4E-32 T 28-03-2018 IPR018076 Type II secretion system F domain DDI_RS13155 7d4cdd149367b7227ca26582f159870f 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 397 1.8E-25 T 28-03-2018 IPR018076 Type II secretion system F domain DDI_RS13155 7d4cdd149367b7227ca26582f159870f 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 DDI_RS13155 7d4cdd149367b7227ca26582f159870f 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 7.6E-43 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS13155 7d4cdd149367b7227ca26582f159870f 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 7.6E-43 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS13155 7d4cdd149367b7227ca26582f159870f 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 7.6E-43 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS13155 7d4cdd149367b7227ca26582f159870f 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 7.6E-43 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS01460 996144f5354d74f613906600671bc56d 710 Gene3D G3DSA:3.40.50.300 508 704 2.4E-20 T 28-03-2018 DDI_RS01460 996144f5354d74f613906600671bc56d 710 Pfam PF02706 Chain length determinant protein 15 105 6.4E-8 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DDI_RS01460 996144f5354d74f613906600671bc56d 710 Pfam PF13807 G-rich domain on putative tyrosine kinase 374 447 1.1E-8 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain DDI_RS01460 996144f5354d74f613906600671bc56d 710 Gene3D G3DSA:3.30.1890.10 47 423 6.6E-16 T 28-03-2018 DDI_RS01460 996144f5354d74f613906600671bc56d 710 SUPERFAMILY SSF52540 513 689 2.6E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14995 058c3f82bfc3baad21e30711b68dc868 263 PIRSF PIRSF015558 1 263 8.0E-56 T 28-03-2018 IPR016634 WYL domain protein, s026 type DDI_RS14995 058c3f82bfc3baad21e30711b68dc868 263 Pfam PF13280 WYL domain 100 171 1.1E-8 T 28-03-2018 IPR026881 WYL domain DDI_RS07900 866fac93babc0c02cc0876505b67fbff 205 SUPERFAMILY SSF52833 1 83 5.04E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS07900 866fac93babc0c02cc0876505b67fbff 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 194 7.1E-7 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal DDI_RS07900 866fac93babc0c02cc0876505b67fbff 205 Gene3D G3DSA:3.40.30.10 2 97 8.8E-28 T 28-03-2018 DDI_RS07900 866fac93babc0c02cc0876505b67fbff 205 SUPERFAMILY SSF47616 72 199 9.88E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS07900 866fac93babc0c02cc0876505b67fbff 205 Gene3D G3DSA:1.20.1050.10 98 200 1.9E-18 T 28-03-2018 DDI_RS07900 866fac93babc0c02cc0876505b67fbff 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 4.8E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS04615 7cadd89fa25a7742b2516e0a14a318f9 286 SUPERFAMILY SSF52833 4 113 1.07E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS04615 7cadd89fa25a7742b2516e0a14a318f9 286 Gene3D G3DSA:3.40.30.10 2 129 3.8E-31 T 28-03-2018 DDI_RS04615 7cadd89fa25a7742b2516e0a14a318f9 286 Gene3D G3DSA:1.25.40.10 130 198 9.4E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS04615 7cadd89fa25a7742b2516e0a14a318f9 286 Pfam PF14561 Tetratricopeptide repeat 197 286 2.9E-29 T 28-03-2018 DDI_RS04615 7cadd89fa25a7742b2516e0a14a318f9 286 Gene3D G3DSA:1.25.40.10 199 286 3.5E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS04615 7cadd89fa25a7742b2516e0a14a318f9 286 Pfam PF00085 Thioredoxin 8 109 6.6E-21 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 DDI_RS04615 7cadd89fa25a7742b2516e0a14a318f9 286 Pfam PF14559 Tetratricopeptide repeat 126 192 6.2E-21 T 28-03-2018 DDI_RS04615 7cadd89fa25a7742b2516e0a14a318f9 286 SUPERFAMILY SSF48452 117 248 1.05E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS19515 461309f5d25d5553e20be88d6c93ff7a 300 Gene3D G3DSA:1.10.3720.10 20 287 7.4E-48 T 28-03-2018 DDI_RS19515 461309f5d25d5553e20be88d6c93ff7a 300 SUPERFAMILY SSF161098 93 280 6.15E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19515 461309f5d25d5553e20be88d6c93ff7a 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 9.0E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19515 461309f5d25d5553e20be88d6c93ff7a 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 2.3E-13 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS08705 e91ec98d9b99986947009d03dc38378c 252 Pfam PF00005 ABC transporter 20 149 1.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS08705 e91ec98d9b99986947009d03dc38378c 252 SUPERFAMILY SSF52540 4 207 1.01E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08705 e91ec98d9b99986947009d03dc38378c 252 Gene3D G3DSA:3.40.50.300 1 240 8.7E-53 T 28-03-2018 DDI_RS08705 e91ec98d9b99986947009d03dc38378c 252 SMART SM00382 29 199 7.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS00220 856b574b9845333eb41531319e4546d3 162 Gene3D G3DSA:3.40.930.10 7 157 7.2E-37 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 DDI_RS00220 856b574b9845333eb41531319e4546d3 162 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain DDI_RS00220 856b574b9845333eb41531319e4546d3 162 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 8 155 7.4E-60 T 28-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 DDI_RS00220 856b574b9845333eb41531319e4546d3 162 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 155 1.7E-36 T 28-03-2018 IPR002178 PTS EIIA type-2 domain DDI_RS00220 856b574b9845333eb41531319e4546d3 162 SUPERFAMILY SSF55804 7 155 3.4E-40 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 DDI_RS15110 e2597dc87cd29333c0e1b9a83df1e4b2 241 Pfam PF03734 L,D-transpeptidase catalytic domain 44 160 3.6E-8 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DDI_RS15110 e2597dc87cd29333c0e1b9a83df1e4b2 241 SUPERFAMILY SSF141523 38 158 2.49E-13 T 28-03-2018 DDI_RS15110 e2597dc87cd29333c0e1b9a83df1e4b2 241 Gene3D G3DSA:2.40.440.10 36 162 1.1E-9 T 28-03-2018 DDI_RS12360 61e8cc8a57dddcc3bd1d8885958acf01 249 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 DDI_RS12360 61e8cc8a57dddcc3bd1d8885958acf01 249 SUPERFAMILY SSF52096 1 246 4.69E-47 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS12360 61e8cc8a57dddcc3bd1d8885958acf01 249 Gene3D G3DSA:3.90.226.10 1 248 1.1E-39 T 28-03-2018 DDI_RS12360 61e8cc8a57dddcc3bd1d8885958acf01 249 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 243 4.2E-66 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 DDI_RS06945 27cb690babbe91d24af8f80dfe9f74d4 215 SUPERFAMILY SSF53955 80 136 5.63E-17 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS06945 27cb690babbe91d24af8f80dfe9f74d4 215 SUPERFAMILY SSF53955 14 39 5.63E-17 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS06945 27cb690babbe91d24af8f80dfe9f74d4 215 Pfam PF01464 Transglycosylase SLT domain 9 148 8.2E-18 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 DDI_RS06945 27cb690babbe91d24af8f80dfe9f74d4 215 Gene3D G3DSA:1.10.530.10 4 210 6.5E-17 T 28-03-2018 DDI_RS12305 cbee95b6ca1f187385c86dae9bc9de76 388 Pfam PF13621 Cupin-like domain 101 315 1.1E-12 T 28-03-2018 DDI_RS12305 cbee95b6ca1f187385c86dae9bc9de76 388 SUPERFAMILY SSF51197 103 309 3.3E-22 T 28-03-2018 DDI_RS12305 cbee95b6ca1f187385c86dae9bc9de76 388 Gene3D G3DSA:2.60.120.650 85 320 2.3E-17 T 28-03-2018 DDI_RS18655 d91fd874e15927be7f2dd94e08f80bc4 156 Gene3D G3DSA:3.10.129.10 8 155 7.3E-27 T 28-03-2018 DDI_RS18655 d91fd874e15927be7f2dd94e08f80bc4 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 154 5.8E-11 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DDI_RS18655 d91fd874e15927be7f2dd94e08f80bc4 156 Pfam PF03061 Thioesterase superfamily 58 143 2.8E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDI_RS18655 d91fd874e15927be7f2dd94e08f80bc4 156 SUPERFAMILY SSF54637 13 155 1.19E-22 T 28-03-2018 IPR029069 HotDog domain DDI_RS01330 f523978373f60372cb912021f3eff601 166 SUPERFAMILY SSF158694 3 162 6.02E-42 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DDI_RS01330 f523978373f60372cb912021f3eff601 166 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 7 164 5.5E-54 T 28-03-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 DDI_RS01330 f523978373f60372cb912021f3eff601 166 Pfam PF09349 OHCU decarboxylase 8 161 1.4E-35 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DDI_RS01330 f523978373f60372cb912021f3eff601 166 Gene3D G3DSA:1.10.3330.10 1 166 3.7E-44 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 184 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 262 289 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 228 242 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 7 465 34.591 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 Pfam PF00308 Bacterial dnaA protein 132 348 1.8E-99 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 SMART SM00382 163 365 1.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 10 464 1.9E-186 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 SUPERFAMILY SSF52540 131 342 8.05E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 1.0E-32 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 Gene3D G3DSA:1.10.8.60 297 368 4.3E-28 T 28-03-2018 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 SUPERFAMILY SSF48295 362 465 3.4E-38 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 SMART SM00760 374 443 6.1E-45 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 Pfam PF11638 DnaA N-terminal domain 8 68 5.4E-20 T 28-03-2018 IPR024633 DnaA N-terminal domain DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 Gene3D G3DSA:3.40.50.300 128 295 8.9E-22 T 28-03-2018 DDI_RS20330 2922d8323dc8ffea00accad27905db27 466 Gene3D G3DSA:1.10.1750.10 369 465 1.5E-36 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DDI_RS08615 ea8857d1cf9ec6bdd121eeeb199ffc6a 1291 Pfam PF13699 Domain of unknown function (DUF4157) 44 109 3.2E-10 T 28-03-2018 IPR025295 Domain of unknown function DUF4157 DDI_RS05490 c9db029231c71b55764fdfbe2d7ff520 380 Pfam PF10282 Lactonase, 7-bladed beta-propeller 36 375 2.4E-83 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller DDI_RS05490 c9db029231c71b55764fdfbe2d7ff520 380 Gene3D G3DSA:2.130.10.10 314 376 3.4E-6 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS05490 c9db029231c71b55764fdfbe2d7ff520 380 Gene3D G3DSA:2.130.10.10 155 313 3.7E-18 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS05490 c9db029231c71b55764fdfbe2d7ff520 380 SUPERFAMILY SSF50974 23 99 3.92E-5 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 DDI_RS05490 c9db029231c71b55764fdfbe2d7ff520 380 Gene3D G3DSA:2.130.10.10 19 154 6.9E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS05490 c9db029231c71b55764fdfbe2d7ff520 380 SUPERFAMILY SSF50974 278 376 2.88E-45 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 DDI_RS05490 c9db029231c71b55764fdfbe2d7ff520 380 SUPERFAMILY SSF50974 91 250 2.88E-45 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 145 160 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 31 51 2.6E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 166 187 2.6E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 190 215 2.6E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 51 70 2.6E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 145 165 2.6E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 12 31 2.6E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 193 205 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 12 212 7.2E-88 T 28-03-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 DDI_RS10370 45585cfb6a1159e28f68a5366fe73304 217 Pfam PF00813 FliP family 15 212 3.7E-60 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DDI_RS16495 b35108314587b47a548ccb4052e713d7 297 SUPERFAMILY SSF53067 122 289 7.29E-33 T 28-03-2018 DDI_RS16495 b35108314587b47a548ccb4052e713d7 297 Gene3D G3DSA:3.30.420.40 135 276 3.3E-24 T 28-03-2018 DDI_RS16495 b35108314587b47a548ccb4052e713d7 297 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 14 247 1.1E-23 T 28-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 DDI_RS16495 b35108314587b47a548ccb4052e713d7 297 SUPERFAMILY SSF53067 9 116 5.55E-19 T 28-03-2018 DDI_RS16495 b35108314587b47a548ccb4052e713d7 297 Gene3D G3DSA:3.30.420.40 1 134 1.3E-14 T 28-03-2018 DDI_RS11845 4d054ffa194b4d4c67c7cf1ffb14dcbd 849 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 72 753 51.662 T 28-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 DDI_RS11845 4d054ffa194b4d4c67c7cf1ffb14dcbd 849 SUPERFAMILY SSF53448 252 540 1.41E-27 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS11845 4d054ffa194b4d4c67c7cf1ffb14dcbd 849 Pfam PF00535 Glycosyl transferase family 2 254 436 1.9E-22 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS11845 4d054ffa194b4d4c67c7cf1ffb14dcbd 849 Gene3D G3DSA:3.90.550.10 232 511 4.9E-20 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS20865 3d24c68fe0f7fe610abaf553713f2280 117 SMART SM00530 14 73 2.6E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS20865 3d24c68fe0f7fe610abaf553713f2280 117 Gene3D G3DSA:1.10.260.40 10 107 1.8E-16 T 28-03-2018 DDI_RS20865 3d24c68fe0f7fe610abaf553713f2280 117 SUPERFAMILY SSF47413 6 77 1.38E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS20865 3d24c68fe0f7fe610abaf553713f2280 117 Pfam PF01381 Helix-turn-helix 15 73 2.3E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS01365 44a29ac7a6b782e8f9b679b0968e2a8b 455 Pfam PF01425 Amidase 28 441 1.4E-85 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS01365 44a29ac7a6b782e8f9b679b0968e2a8b 455 Gene3D G3DSA:3.90.1300.10 9 451 7.7E-120 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS01365 44a29ac7a6b782e8f9b679b0968e2a8b 455 SUPERFAMILY SSF75304 7 450 2.49E-113 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 Pfam PF00072 Response regulator receiver domain 190 312 1.8E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 PIRSF PIRSF002867 1 320 3.4E-99 T 28-03-2018 IPR024181 Chemotaxis response regulator CheV DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 Pfam PF01584 CheW-like domain 21 163 3.6E-32 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 Gene3D G3DSA:2.30.30.40 108 155 1.5E-7 T 28-03-2018 DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 Gene3D G3DSA:3.40.50.2300 174 325 6.9E-21 T 28-03-2018 DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 Gene3D G3DSA:2.40.50.180 45 107 8.6E-14 T 28-03-2018 DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 SMART SM00448 187 312 2.7E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 SUPERFAMILY SSF50341 17 165 3.79E-27 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 SUPERFAMILY SSF52172 189 320 1.71E-21 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS06455 9b40dc2baf5f09bbf740aad5350ae1b4 325 SMART SM00260 17 161 2.1E-18 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 DDI_RS09015 ea2f5aa934c64fd190037d5eb4e3c0a4 214 Pfam PF01914 MarC family integral membrane protein 9 210 2.7E-72 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DDI_RS09015 ea2f5aa934c64fd190037d5eb4e3c0a4 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 2.3E-77 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DDI_RS19935 bc8df6303cd66ba7c974d826a6d36d3c 223 SMART SM00862 145 216 9.6E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS19935 bc8df6303cd66ba7c974d826a6d36d3c 223 Gene3D G3DSA:1.10.10.10 120 223 5.9E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19935 bc8df6303cd66ba7c974d826a6d36d3c 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.3E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS19935 bc8df6303cd66ba7c974d826a6d36d3c 223 SMART SM00448 1 112 7.8E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS19935 bc8df6303cd66ba7c974d826a6d36d3c 223 Gene3D G3DSA:3.40.50.2300 1 119 2.0E-33 T 28-03-2018 DDI_RS19935 bc8df6303cd66ba7c974d826a6d36d3c 223 SUPERFAMILY SSF52172 1 178 2.7E-38 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS19935 bc8df6303cd66ba7c974d826a6d36d3c 223 Pfam PF00072 Response regulator receiver domain 3 112 2.1E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS01455 98373f6c3d0ed9c8a75e5dfcf948705e 185 Pfam PF02563 Polysaccharide biosynthesis/export protein 35 107 1.6E-17 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 DDI_RS01455 98373f6c3d0ed9c8a75e5dfcf948705e 185 Pfam PF10531 SLBB domain 113 154 6.7E-10 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS01455 98373f6c3d0ed9c8a75e5dfcf948705e 185 Gene3D G3DSA:3.30.1950.10 41 102 5.2E-16 T 28-03-2018 DDI_RS01455 98373f6c3d0ed9c8a75e5dfcf948705e 185 Gene3D G3DSA:3.10.560.10 103 181 1.4E-14 T 28-03-2018 DDI_RS20340 e38fad2bfd9808ea632defc7f9161868 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 6.2E-132 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DDI_RS20340 e38fad2bfd9808ea632defc7f9161868 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DDI_RS20340 e38fad2bfd9808ea632defc7f9161868 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 99.22 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DDI_RS20340 e38fad2bfd9808ea632defc7f9161868 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 353 3.4E-38 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal DDI_RS20340 e38fad2bfd9808ea632defc7f9161868 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DDI_RS20340 e38fad2bfd9808ea632defc7f9161868 361 SUPERFAMILY SSF52540 1 340 3.15E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20340 e38fad2bfd9808ea632defc7f9161868 361 Gene3D G3DSA:3.40.50.300 1 360 3.8E-27 T 28-03-2018 DDI_RS17845 391dd2acaec020c0c989c4d089fce000 276 Gene3D G3DSA:3.30.450.40 92 274 7.5E-49 T 28-03-2018 IPR029016 GAF domain-like DDI_RS17845 391dd2acaec020c0c989c4d089fce000 276 Pfam PF09339 IclR helix-turn-helix domain 29 79 2.1E-18 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS17845 391dd2acaec020c0c989c4d089fce000 276 SUPERFAMILY SSF55781 98 273 5.23E-48 T 28-03-2018 IPR029016 GAF domain-like DDI_RS17845 391dd2acaec020c0c989c4d089fce000 276 SUPERFAMILY SSF46785 27 100 3.67E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17845 391dd2acaec020c0c989c4d089fce000 276 SMART SM00346 27 117 2.2E-34 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDI_RS17845 391dd2acaec020c0c989c4d089fce000 276 Gene3D G3DSA:1.10.10.10 9 88 4.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17845 391dd2acaec020c0c989c4d089fce000 276 Pfam PF01614 Bacterial transcriptional regulator 148 270 6.9E-39 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal DDI_RS00215 743c7928bb20be9da4a491c838b7c474 284 SUPERFAMILY SSF52540 2 151 3.77E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00215 743c7928bb20be9da4a491c838b7c474 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.102 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 DDI_RS00215 743c7928bb20be9da4a491c838b7c474 284 Pfam PF03668 P-loop ATPase protein family 1 282 2.1E-143 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 DDI_RS00215 743c7928bb20be9da4a491c838b7c474 284 PIRSF PIRSF005052 1 284 3.7E-114 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 DDI_RS00215 743c7928bb20be9da4a491c838b7c474 284 Gene3D G3DSA:3.40.50.300 1 152 4.3E-12 T 28-03-2018 DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 Gene3D G3DSA:1.10.10.10 79 147 8.7E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 SUPERFAMILY SSF46785 5 73 2.36E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 SMART SM00345 91 147 0.074 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 SMART SM00345 11 69 0.034 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 Gene3D G3DSA:1.10.10.10 1 71 5.8E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 SMART SM00895 159 284 8.9E-9 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 Pfam PF07729 FCD domain 159 283 8.6E-13 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 Gene3D G3DSA:1.20.120.530 152 291 2.5E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 SUPERFAMILY SSF48008 156 289 2.3E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 8.9E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS05480 38082705f64b635d6ba79b12e06ea436 298 Pfam PF00392 Bacterial regulatory proteins, gntR family 107 146 1.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS06775 b8c333a459d153f121c3955692981998 392 Pfam PF00529 HlyD membrane-fusion protein of T1SS 232 341 2.6E-8 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS06775 b8c333a459d153f121c3955692981998 392 Gene3D G3DSA:2.40.50.100 55 133 3.6E-13 T 28-03-2018 DDI_RS06775 b8c333a459d153f121c3955692981998 392 Gene3D G3DSA:1.10.287.470 134 177 2.9E-10 T 28-03-2018 DDI_RS06775 b8c333a459d153f121c3955692981998 392 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 285 1.8E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS06775 b8c333a459d153f121c3955692981998 392 SUPERFAMILY SSF111369 55 108 1.96E-8 T 28-03-2018 DDI_RS06775 b8c333a459d153f121c3955692981998 392 SUPERFAMILY SSF111369 137 175 1.96E-8 T 28-03-2018 DDI_RS06775 b8c333a459d153f121c3955692981998 392 Gene3D G3DSA:2.40.50.100 204 359 2.2E-8 T 28-03-2018 DDI_RS06775 b8c333a459d153f121c3955692981998 392 SUPERFAMILY SSF111369 156 263 2.62E-10 T 28-03-2018 DDI_RS08720 307f138b8ea79067e11eae58e73cc552 328 PIRSF PIRSF026649 13 318 1.6E-95 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDI_RS08720 307f138b8ea79067e11eae58e73cc552 328 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 16 309 1.8E-96 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDI_RS08720 307f138b8ea79067e11eae58e73cc552 328 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 14 318 2.7E-132 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 DDI_RS08720 307f138b8ea79067e11eae58e73cc552 328 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 8 314 51.563 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 DDI_RS06740 3b1a97387eb0e3dcab72902faadddeb7 265 Gene3D G3DSA:3.40.50.150 15 211 8.1E-36 T 28-03-2018 DDI_RS06740 3b1a97387eb0e3dcab72902faadddeb7 265 SUPERFAMILY SSF53335 6 265 1.67E-42 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS06740 3b1a97387eb0e3dcab72902faadddeb7 265 Pfam PF08241 Methyltransferase domain 67 161 1.0E-22 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 DDI_RS14245 a2087b289da37a5a740dfb1793f80579 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS14245 a2087b289da37a5a740dfb1793f80579 86 Gene3D G3DSA:3.30.70.20 2 83 2.4E-16 T 28-03-2018 DDI_RS14245 a2087b289da37a5a740dfb1793f80579 86 SUPERFAMILY SSF54862 5 65 7.54E-18 T 28-03-2018 DDI_RS14245 a2087b289da37a5a740dfb1793f80579 86 Pfam PF12838 4Fe-4S dicluster domain 8 56 6.5E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS19925 59fd70278fc182c87171910d6394af39 139 SUPERFAMILY SSF102546 1 139 5.1E-45 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDI_RS19925 59fd70278fc182c87171910d6394af39 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.7E-47 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDI_RS19925 59fd70278fc182c87171910d6394af39 139 Gene3D G3DSA:3.40.1650.10 1 139 2.0E-39 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDI_RS19925 59fd70278fc182c87171910d6394af39 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.402 T 28-03-2018 IPR023064 D-ribose pyranase GO:0016872 DDI_RS17395 d0bf283f4ac86250b7b3829cf5390d32 400 Gene3D G3DSA:3.40.640.10 45 274 5.0E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS17395 d0bf283f4ac86250b7b3829cf5390d32 400 Pfam PF00155 Aminotransferase class I and II 32 392 8.3E-69 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS17395 d0bf283f4ac86250b7b3829cf5390d32 400 Gene3D G3DSA:3.90.1150.10 275 400 1.4E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS17395 d0bf283f4ac86250b7b3829cf5390d32 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DDI_RS17395 d0bf283f4ac86250b7b3829cf5390d32 400 SUPERFAMILY SSF53383 1 396 2.75E-108 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS18455 1a470a57c3164af0ec3d056407fbde94 239 SUPERFAMILY SSF46894 132 234 9.92E-27 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS18455 1a470a57c3164af0ec3d056407fbde94 239 Gene3D G3DSA:1.10.10.10 126 239 4.5E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18455 1a470a57c3164af0ec3d056407fbde94 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS18455 1a470a57c3164af0ec3d056407fbde94 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS18455 1a470a57c3164af0ec3d056407fbde94 239 Gene3D G3DSA:3.40.50.2300 2 125 2.0E-38 T 28-03-2018 DDI_RS18455 1a470a57c3164af0ec3d056407fbde94 239 SMART SM00448 5 116 8.6E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS18455 1a470a57c3164af0ec3d056407fbde94 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS18455 1a470a57c3164af0ec3d056407fbde94 239 SMART SM00862 156 232 1.7E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS04340 02ff7056d3ab486680343ea0d32814ae 430 ProSitePatterns PS01219 Ammonium transporters signature. 184 209 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DDI_RS04340 02ff7056d3ab486680343ea0d32814ae 430 SUPERFAMILY SSF111352 29 409 3.01E-123 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DDI_RS04340 02ff7056d3ab486680343ea0d32814ae 430 TIGRFAM TIGR00836 amt: ammonium transporter 33 428 5.3E-133 T 28-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 DDI_RS04340 02ff7056d3ab486680343ea0d32814ae 430 Pfam PF00909 Ammonium Transporter Family 35 428 4.7E-123 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DDI_RS04340 02ff7056d3ab486680343ea0d32814ae 430 Gene3D G3DSA:1.10.3430.10 25 409 4.2E-127 T 28-03-2018 DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 Gene3D G3DSA:3.40.190.10 89 179 4.3E-15 T 28-03-2018 DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 Gene3D G3DSA:3.40.190.10 180 269 3.2E-16 T 28-03-2018 DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 SUPERFAMILY SSF53850 90 293 3.67E-30 T 28-03-2018 DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 Pfam PF03466 LysR substrate binding domain 89 292 5.4E-29 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 SUPERFAMILY SSF46785 6 87 1.92E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 Gene3D G3DSA:1.10.10.10 1 84 7.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03175 6910eda1b0047f5dec08d3f21a162540 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 2.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS19275 fee095b8a021f06ebde705cf0dd0b609 392 SUPERFAMILY SSF56601 43 380 5.22E-60 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS19275 fee095b8a021f06ebde705cf0dd0b609 392 Gene3D G3DSA:3.40.710.10 40 380 2.3E-56 T 28-03-2018 DDI_RS19275 fee095b8a021f06ebde705cf0dd0b609 392 Pfam PF00144 Beta-lactamase 48 376 1.5E-43 T 28-03-2018 IPR001466 Beta-lactamase-related DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 Gene3D G3DSA:1.10.3210.10 3 262 4.5E-56 T 28-03-2018 DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 Pfam PF13286 Phosphohydrolase-associated domain 432 500 7.8E-7 T 28-03-2018 IPR026875 Phosphohydrolase-associated domain DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 505 49.587 T 28-03-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 Pfam PF01966 HD domain 66 135 1.4E-10 T 28-03-2018 IPR006674 HD domain DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 503 6.0E-125 T 28-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 Gene3D G3DSA:1.10.3410.10 263 390 1.5E-23 T 28-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 SMART SM00471 62 282 9.9E-11 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 SUPERFAMILY SSF109604 251 432 5.73E-63 T 28-03-2018 DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 SUPERFAMILY SSF109604 24 134 5.73E-63 T 28-03-2018 DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 SUPERFAMILY SSF109604 182 215 5.73E-63 T 28-03-2018 DDI_RS14465 d9befafa69eb4b2cbb9b5b83ec5e052e 505 SUPERFAMILY SSF109604 484 502 5.73E-63 T 28-03-2018 DDI_RS18145 5ee97be4314e7b0ddea6648bfdb50856 129 Gene3D G3DSA:3.40.1260.10 2 129 4.6E-29 T 28-03-2018 DDI_RS18145 5ee97be4314e7b0ddea6648bfdb50856 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 129 1.8E-53 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 DDI_RS18145 5ee97be4314e7b0ddea6648bfdb50856 129 SUPERFAMILY SSF75169 1 129 3.14E-36 T 28-03-2018 IPR027396 DsrEFH-like DDI_RS18145 5ee97be4314e7b0ddea6648bfdb50856 129 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 2 129 39.937 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 DDI_RS18145 5ee97be4314e7b0ddea6648bfdb50856 129 Pfam PF02635 DsrE/DsrF-like family 4 129 3.9E-28 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein DDI_RS17785 0df438f5ac283312e4bc19a71e42aafc 118 SUPERFAMILY SSF81343 3 117 9.15E-50 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17785 0df438f5ac283312e4bc19a71e42aafc 118 Gene3D G3DSA:1.20.1300.10 1 118 3.6E-27 T 28-03-2018 DDI_RS17785 0df438f5ac283312e4bc19a71e42aafc 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 118 26.719 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DDI_RS17785 0df438f5ac283312e4bc19a71e42aafc 118 PIRSF PIRSF000179 1 118 7.0E-51 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DDI_RS17785 0df438f5ac283312e4bc19a71e42aafc 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 118 3.0E-40 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DDI_RS17785 0df438f5ac283312e4bc19a71e42aafc 118 Pfam PF02313 Fumarate reductase subunit D 6 115 3.0E-48 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 SUPERFAMILY SSF117916 211 280 4.14E-16 T 28-03-2018 IPR034904 Fe-S cluster assembly domain DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 Pfam PF01106 NifU-like domain 215 278 4.8E-17 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 223 280 3.0E-20 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 Gene3D G3DSA:3.30.300.130 209 281 2.2E-15 T 28-03-2018 IPR034904 Fe-S cluster assembly domain DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 SUPERFAMILY SSF82649 2 131 1.28E-40 T 28-03-2018 DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 Pfam PF01592 NifU-like N terminal domain 4 125 2.1E-46 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 PIRSF PIRSF000375 1 281 7.6E-118 T 28-03-2018 IPR016217 Nitrogen fixation, NifU DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 TIGRFAM TIGR02000 NifU_proper: Fe-S cluster assembly protein NifU 1 281 1.0E-141 T 28-03-2018 IPR010238 NIF system FeS cluster assembly, NifU GO:0005506|GO:0016226|GO:0051536 DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 Gene3D G3DSA:3.90.1010.10 1 158 1.4E-53 T 28-03-2018 DDI_RS17560 44dc4414dae4ea9a95323aa99f0cbf76 281 Pfam PF04324 BFD-like [2Fe-2S] binding domain 135 184 1.3E-16 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DDI_RS03885 848efec67b0d46f956489f3af8ca8db3 270 Gene3D G3DSA:2.60.120.330 82 254 2.2E-38 T 28-03-2018 IPR027443 Isopenicillin N synthase-like DDI_RS03885 848efec67b0d46f956489f3af8ca8db3 270 SUPERFAMILY SSF51197 120 244 1.7E-14 T 28-03-2018 DDI_RS03885 848efec67b0d46f956489f3af8ca8db3 270 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 92 243 1.3E-34 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 DDI_RS14450 bbd1349813344a32f1f8f1979fa02565 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 149 157 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 DDI_RS14450 bbd1349813344a32f1f8f1979fa02565 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 330 3.5E-136 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 DDI_RS14450 bbd1349813344a32f1f8f1979fa02565 336 Gene3D G3DSA:3.40.190.10 133 333 3.7E-46 T 28-03-2018 DDI_RS14450 bbd1349813344a32f1f8f1979fa02565 336 Gene3D G3DSA:3.40.190.10 23 132 8.9E-22 T 28-03-2018 DDI_RS14450 bbd1349813344a32f1f8f1979fa02565 336 SUPERFAMILY SSF53850 23 331 1.45E-85 T 28-03-2018 DDI_RS14450 bbd1349813344a32f1f8f1979fa02565 336 Pfam PF13531 Bacterial extracellular solute-binding protein 34 284 5.8E-46 T 28-03-2018 DDI_RS15900 b9dc9c2b39f68816b5fdb319c5748ec1 448 Pfam PF02378 Phosphotransferase system, EIIC 29 360 1.5E-47 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS15900 b9dc9c2b39f68816b5fdb319c5748ec1 448 PIRSF PIRSF006351 1 444 3.1E-135 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DDI_RS15900 b9dc9c2b39f68816b5fdb319c5748ec1 448 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 14 431 4.3E-108 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DDI_RS14455 b7b9304978743cc4108f76e6b9fd5b91 385 Pfam PF05651 Putative sugar diacid recognition 6 138 7.5E-50 T 28-03-2018 IPR008599 Putative sugar diacid recognition DDI_RS14455 b7b9304978743cc4108f76e6b9fd5b91 385 Gene3D G3DSA:3.30.450.40 27 124 0.035 T 28-03-2018 IPR029016 GAF domain-like DDI_RS14455 b7b9304978743cc4108f76e6b9fd5b91 385 Gene3D G3DSA:1.10.10.60 305 359 2.7E-6 T 28-03-2018 DDI_RS14455 b7b9304978743cc4108f76e6b9fd5b91 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 380 3.6E-23 T 28-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain DDI_RS16555 72d121bae69737159c2fa73b6eab6ffc 157 Pfam PF04074 Domain of unknown function (DUF386) 1 149 1.2E-33 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family DDI_RS16555 72d121bae69737159c2fa73b6eab6ffc 157 SUPERFAMILY SSF51197 1 153 9.61E-33 T 28-03-2018 DDI_RS16555 72d121bae69737159c2fa73b6eab6ffc 157 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 1.7E-29 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family DDI_RS16555 72d121bae69737159c2fa73b6eab6ffc 157 Gene3D G3DSA:2.60.120.370 1 153 1.2E-37 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family DDI_RS08740 18c68d65e9332348184aadcbecd1067b 289 SUPERFAMILY SSF46689 1 80 2.87E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS08740 18c68d65e9332348184aadcbecd1067b 289 Gene3D G3DSA:3.40.50.10490 94 282 6.1E-37 T 28-03-2018 DDI_RS08740 18c68d65e9332348184aadcbecd1067b 289 SUPERFAMILY SSF53697 93 277 9.64E-42 T 28-03-2018 DDI_RS08740 18c68d65e9332348184aadcbecd1067b 289 Pfam PF01380 SIS domain 124 252 8.5E-26 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS08740 18c68d65e9332348184aadcbecd1067b 289 Gene3D G3DSA:1.10.10.10 1 93 5.6E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08740 18c68d65e9332348184aadcbecd1067b 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.6E-29 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 Gene3D G3DSA:3.40.120.10 12 213 1.5E-47 T 28-03-2018 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 439 3.1E-29 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 Gene3D G3DSA:3.30.310.50 443 546 1.4E-19 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 SUPERFAMILY SSF53738 305 446 1.56E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 SUPERFAMILY SSF53738 26 235 2.17E-51 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 Gene3D G3DSA:3.40.120.10 214 331 1.3E-23 T 28-03-2018 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 SUPERFAMILY SSF55957 433 544 1.96E-18 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.4E-19 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 28-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 3.7E-35 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 SUPERFAMILY SSF53738 209 317 3.3E-8 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 Gene3D G3DSA:3.40.120.10 332 440 2.7E-26 T 28-03-2018 DDI_RS05015 331b2f6e1a5fdc5f3c2f9c3d32bb681c 547 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 481 538 2.2E-7 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDI_RS03770 0743f7ccd1a66996b2e5dbcc135c205e 165 Gene3D G3DSA:3.30.910.20 11 92 9.5E-12 T 28-03-2018 DDI_RS03770 0743f7ccd1a66996b2e5dbcc135c205e 165 Gene3D G3DSA:3.30.910.20 93 165 9.1E-18 T 28-03-2018 DDI_RS03770 0743f7ccd1a66996b2e5dbcc135c205e 165 PIRSF PIRSF002094 1 165 2.1E-61 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 DDI_RS03770 0743f7ccd1a66996b2e5dbcc135c205e 165 Pfam PF03938 Outer membrane protein (OmpH-like) 12 163 9.3E-36 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 DDI_RS03770 0743f7ccd1a66996b2e5dbcc135c205e 165 SUPERFAMILY SSF111384 22 164 1.29E-37 T 28-03-2018 IPR024930 Skp domain DDI_RS03770 0743f7ccd1a66996b2e5dbcc135c205e 165 SMART SM00935 12 165 1.8E-55 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 DDI_RS01540 2002b03574076013ba6d15092ea16004 433 PIRSF PIRSF004539 1 433 1.1E-181 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDI_RS01540 2002b03574076013ba6d15092ea16004 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 3.4E-198 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDI_RS01540 2002b03574076013ba6d15092ea16004 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 4.5E-153 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDI_RS11885 5169840cb1e8631a2476f07bd604fe7d 576 SUPERFAMILY SSF54211 348 539 9.48E-34 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS11885 5169840cb1e8631a2476f07bd604fe7d 576 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 433 536 1.2E-10 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DDI_RS11885 5169840cb1e8631a2476f07bd604fe7d 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 348 364 1.2E-12 T 28-03-2018 DDI_RS11885 5169840cb1e8631a2476f07bd604fe7d 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 431 450 1.2E-12 T 28-03-2018 DDI_RS11885 5169840cb1e8631a2476f07bd604fe7d 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 461 480 1.2E-12 T 28-03-2018 DDI_RS11885 5169840cb1e8631a2476f07bd604fe7d 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 491 509 1.2E-12 T 28-03-2018 DDI_RS11885 5169840cb1e8631a2476f07bd604fe7d 576 Pfam PF13654 AAA domain 136 322 3.0E-22 T 28-03-2018 DDI_RS11885 5169840cb1e8631a2476f07bd604fe7d 576 Gene3D G3DSA:3.30.230.10 325 564 6.7E-29 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 SMART SM01383 42 118 3.1E-49 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 SUPERFAMILY SSF50249 3 125 4.11E-50 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 Gene3D G3DSA:2.40.50.140 1 114 1.2E-48 T 28-03-2018 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 SUPERFAMILY SSF50104 127 269 2.17E-59 T 28-03-2018 IPR008991 Translation protein SH3-like domain DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 PIRSF PIRSF002158 12 273 2.7E-100 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.125 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 9.8E-132 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 SMART SM01382 124 251 4.3E-89 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.2E-55 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.2E-34 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 Gene3D G3DSA:2.30.30.30 119 195 2.2E-31 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 DDI_RS18080 171ca68fdcba17ba3c89358d48053d02 273 Gene3D G3DSA:4.10.950.10 197 272 3.4E-35 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 DDI_RS11875 ec4e0e61b4e9134c3b3ccaa6de4e0e78 61 Pfam PF10753 Toxin GhoT_OrtT 7 61 1.3E-25 T 28-03-2018 IPR019689 Toxin GhoT/OrtT DDI_RS18570 85bc928fe8f87e450570be06979b13d2 197 Pfam PF01914 MarC family integral membrane protein 2 194 8.9E-59 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DDI_RS02395 c075f23b8ede57b2b8c5f77036d08f0f 576 Pfam PF02272 DHHA1 domain 321 452 1.7E-25 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DDI_RS02395 c075f23b8ede57b2b8c5f77036d08f0f 576 Pfam PF01368 DHH family 73 206 8.8E-10 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS02395 c075f23b8ede57b2b8c5f77036d08f0f 576 Gene3D G3DSA:3.90.1640.10 54 244 3.1E-23 T 28-03-2018 DDI_RS02395 c075f23b8ede57b2b8c5f77036d08f0f 576 SUPERFAMILY SSF64182 47 465 4.71E-117 T 28-03-2018 DDI_RS02395 c075f23b8ede57b2b8c5f77036d08f0f 576 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 572 1.5E-160 T 28-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DDI_RS05625 f49b547f3d05ccb35dce83540339d246 367 Pfam PF07519 Tannase and feruloyl esterase 4 366 1.6E-86 T 28-03-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 DDI_RS05625 f49b547f3d05ccb35dce83540339d246 367 Gene3D G3DSA:3.40.50.1820 1 323 2.6E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05625 f49b547f3d05ccb35dce83540339d246 367 SUPERFAMILY SSF53474 174 189 9.49E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05625 f49b547f3d05ccb35dce83540339d246 367 SUPERFAMILY SSF53474 242 304 9.49E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05625 f49b547f3d05ccb35dce83540339d246 367 SUPERFAMILY SSF53474 19 76 9.49E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS17780 10fa6c72f21b490d18540310a0c1dc2d 131 SUPERFAMILY SSF81343 3 130 2.45E-57 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17780 10fa6c72f21b490d18540310a0c1dc2d 131 Pfam PF02300 Fumarate reductase subunit C 3 128 3.3E-54 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DDI_RS17780 10fa6c72f21b490d18540310a0c1dc2d 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 112 3.0E-41 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DDI_RS17780 10fa6c72f21b490d18540310a0c1dc2d 131 Gene3D G3DSA:1.20.1300.10 3 128 8.5E-54 T 28-03-2018 DDI_RS17780 10fa6c72f21b490d18540310a0c1dc2d 131 PIRSF PIRSF000180 2 130 2.3E-57 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DDI_RS17780 10fa6c72f21b490d18540310a0c1dc2d 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.658 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DDI_RS06490 bb7b745ec3cd94e6aaadcae66d9a2fba 205 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 5 200 2.5E-49 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 DDI_RS06490 bb7b745ec3cd94e6aaadcae66d9a2fba 205 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 5 198 2.5E-42 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 DDI_RS16670 cbb37a80f20d27851b4aa60a85fecfc6 249 SUPERFAMILY SSF160950 7 249 4.97E-87 T 28-03-2018 IPR009777 Cell division protein ZapD DDI_RS16670 cbb37a80f20d27851b4aa60a85fecfc6 249 Pfam PF07072 Cell division protein 22 228 5.2E-73 T 28-03-2018 IPR009777 Cell division protein ZapD DDI_RS16670 cbb37a80f20d27851b4aa60a85fecfc6 249 Gene3D G3DSA:1.10.3900.10 16 177 3.3E-56 T 28-03-2018 DDI_RS16670 cbb37a80f20d27851b4aa60a85fecfc6 249 Gene3D G3DSA:2.60.440.10 178 249 1.4E-26 T 28-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain DDI_RS16670 cbb37a80f20d27851b4aa60a85fecfc6 249 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 249 31.365 T 28-03-2018 IPR009777 Cell division protein ZapD DDI_RS06610 1698635ce9d9ffb7bdc2f9bf03527bbb 409 Gene3D G3DSA:2.60.200.20 1 117 5.9E-9 T 28-03-2018 DDI_RS06610 1698635ce9d9ffb7bdc2f9bf03527bbb 409 SUPERFAMILY SSF49879 4 106 1.18E-8 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 DDI_RS06610 1698635ce9d9ffb7bdc2f9bf03527bbb 409 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 7 403 7.3E-117 T 28-03-2018 IPR017735 Type VI secretion system, FHA domain-containing protein DDI_RS10460 4c9ac53c0b42b0a0520420232186b29c 272 SUPERFAMILY SSF161098 11 266 3.83E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10460 4c9ac53c0b42b0a0520420232186b29c 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 266 1.7E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10460 4c9ac53c0b42b0a0520420232186b29c 272 Gene3D G3DSA:1.10.3720.10 15 269 3.6E-42 T 28-03-2018 DDI_RS07000 261887147cb5725e65ca6e5a909aaa7f 172 SUPERFAMILY SSF141452 3 168 3.14E-40 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS07000 261887147cb5725e65ca6e5a909aaa7f 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.5E-64 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS07000 261887147cb5725e65ca6e5a909aaa7f 172 Gene3D G3DSA:2.30.110.20 2 172 1.3E-51 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS07000 261887147cb5725e65ca6e5a909aaa7f 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.4E-32 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS03000 7f5cb439104387d18677cf04383094a7 431 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 398 5.8E-24 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 DDI_RS15400 7ee77ea7256303283cfab0818b9aeb0c 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 1 207 2.4E-89 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DDI_RS15400 7ee77ea7256303283cfab0818b9aeb0c 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.182 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DDI_RS15400 7ee77ea7256303283cfab0818b9aeb0c 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DDI_RS15400 7ee77ea7256303283cfab0818b9aeb0c 208 SUPERFAMILY SSF53335 9 204 7.69E-48 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS15400 7ee77ea7256303283cfab0818b9aeb0c 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 4.2E-76 T 28-03-2018 DDI_RS15400 7ee77ea7256303283cfab0818b9aeb0c 208 Gene3D G3DSA:3.40.50.150 10 206 2.3E-37 T 28-03-2018 DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 Pfam PF01047 MarR family 29 87 4.1E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 SUPERFAMILY SSF46785 2 137 1.22E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 SMART SM00347 22 123 1.4E-26 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 Gene3D G3DSA:1.10.10.10 1 145 8.5E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 3.5E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 3.5E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 3.5E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 3.5E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS11205 484ae1efa2a2ce0ff4543de3c1ecf86f 145 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 36.707 T 28-03-2018 IPR023071 Transcriptional regulator, SlyA DDI_RS09915 a8bfb04eee097742fe902efbd39f0e75 278 Gene3D G3DSA:2.60.120.520 24 131 1.2E-48 T 28-03-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DDI_RS09915 a8bfb04eee097742fe902efbd39f0e75 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 54.778 T 28-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DDI_RS09915 a8bfb04eee097742fe902efbd39f0e75 278 PIRSF PIRSF006625 1 278 4.0E-136 T 28-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DDI_RS09915 a8bfb04eee097742fe902efbd39f0e75 278 Gene3D G3DSA:2.60.120.10 132 278 5.8E-53 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS09915 a8bfb04eee097742fe902efbd39f0e75 278 Pfam PF04962 KduI/IolB family 68 273 1.3E-33 T 28-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DDI_RS09915 a8bfb04eee097742fe902efbd39f0e75 278 SUPERFAMILY SSF51182 1 262 8.91E-104 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS07750 a02ba5795dd00c9368805dcd0dc6438e 561 SUPERFAMILY SSF52794 103 203 4.71E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS07750 a02ba5795dd00c9368805dcd0dc6438e 561 Gene3D G3DSA:3.40.50.2300 21 84 0.0096 T 28-03-2018 DDI_RS07750 a02ba5795dd00c9368805dcd0dc6438e 561 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 220 552 4.4E-141 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DDI_RS07750 a02ba5795dd00c9368805dcd0dc6438e 561 Pfam PF02378 Phosphotransferase system, EIIC 233 495 4.4E-17 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS07750 a02ba5795dd00c9368805dcd0dc6438e 561 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 106 189 6.1E-18 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS07750 a02ba5795dd00c9368805dcd0dc6438e 561 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 105 188 1.2E-38 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 DDI_RS07750 a02ba5795dd00c9368805dcd0dc6438e 561 SUPERFAMILY SSF52794 5 87 2.27E-5 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS07750 a02ba5795dd00c9368805dcd0dc6438e 561 Gene3D G3DSA:3.40.50.2300 103 201 1.0E-37 T 28-03-2018 DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 PIRSF PIRSF000485 1 483 2.8E-170 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 45.094 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 SUPERFAMILY SSF56235 2 259 1.12E-75 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 Gene3D G3DSA:3.60.20.10 45 279 4.0E-57 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 Gene3D G3DSA:3.40.50.2020 280 446 1.1E-36 T 28-03-2018 DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 1.4E-6 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 Pfam PF13522 Glutamine amidotransferase domain 64 202 2.3E-15 T 28-03-2018 DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 7.0E-163 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DDI_RS12820 07bd53f873ccfaa58dd282a2e62b1801 505 SUPERFAMILY SSF53271 252 485 1.7E-70 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS14240 08669fd16437d121267646db14a5ebc5 263 SMART SM00052 17 255 3.7E-18 T 28-03-2018 IPR001633 EAL domain DDI_RS14240 08669fd16437d121267646db14a5ebc5 263 Pfam PF00563 EAL domain 40 250 5.9E-30 T 28-03-2018 IPR001633 EAL domain DDI_RS14240 08669fd16437d121267646db14a5ebc5 263 SUPERFAMILY SSF141868 34 259 3.14E-34 T 28-03-2018 IPR001633 EAL domain DDI_RS14240 08669fd16437d121267646db14a5ebc5 263 Gene3D G3DSA:3.20.20.450 37 261 2.6E-34 T 28-03-2018 IPR001633 EAL domain DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 Gene3D G3DSA:3.50.50.60 1 116 1.6E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 Gene3D G3DSA:3.50.50.60 117 245 1.4E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 278 9.2E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 2.3E-13 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 2.3E-13 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.3E-13 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 2.3E-13 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 4.6E-19 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.6E-19 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 4.6E-19 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 4.6E-19 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 4.6E-19 T 28-03-2018 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 SUPERFAMILY SSF51905 4 301 4.26E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS03100 092bb70870cf37b9a668f183cec2e585 385 Gene3D G3DSA:3.50.50.60 246 320 2.0E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 Gene3D G3DSA:3.40.190.10 80 181 2.7E-15 T 28-03-2018 DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 SUPERFAMILY SSF53850 89 298 7.24E-30 T 28-03-2018 DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 Pfam PF03466 LysR substrate binding domain 89 290 1.2E-29 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 Gene3D G3DSA:1.10.10.10 1 79 5.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 SUPERFAMILY SSF46785 1 85 5.44E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS17390 69dfe4540ff4710fb10fa68bd8e71ee3 307 Gene3D G3DSA:3.40.190.10 182 262 1.6E-11 T 28-03-2018 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 913 924 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 Gene3D G3DSA:3.20.20.220 180 612 1.4E-110 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 PIRSF PIRSF000197 76 1325 0.0 T 28-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 Gene3D G3DSA:1.10.1220.10 2 48 6.6E-7 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 SUPERFAMILY SSF81935 90 262 2.75E-65 T 28-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 Gene3D G3DSA:3.40.309.10 904 1102 8.0E-48 T 28-03-2018 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 SUPERFAMILY SSF47598 3 45 5.11E-11 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 Gene3D G3DSA:3.40.605.10 654 903 1.9E-73 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 SUPERFAMILY SSF51730 264 620 1.29E-122 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 Pfam PF00171 Aldehyde dehydrogenase family 662 1112 4.8E-116 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 Gene3D G3DSA:1.20.5.550 91 139 3.1E-18 T 28-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 261 4.8E-46 T 28-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 SUPERFAMILY SSF53720 658 1116 1.44E-127 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 Pfam PF01619 Proline dehydrogenase 272 571 9.1E-99 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DDI_RS18895 b23520068f48e31b2c3b029f1a3ce10e 1325 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 613 1116 1.6E-235 T 28-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDI_RS00330 aff86b51a257aff8add99b16880ffe51 130 SUPERFAMILY SSF54211 5 130 2.58E-49 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS00330 aff86b51a257aff8add99b16880ffe51 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.029 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DDI_RS00330 aff86b51a257aff8add99b16880ffe51 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 28-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DDI_RS00330 aff86b51a257aff8add99b16880ffe51 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.6E-46 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DDI_RS00330 aff86b51a257aff8add99b16880ffe51 130 Gene3D G3DSA:3.30.230.10 3 130 1.5E-52 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS11575 73b1b04815e96c6e38527dcf1fe25a2b 244 SMART SM00052 1 232 7.0E-4 T 28-03-2018 IPR001633 EAL domain DDI_RS11575 73b1b04815e96c6e38527dcf1fe25a2b 244 SUPERFAMILY SSF141868 15 225 2.62E-15 T 28-03-2018 IPR001633 EAL domain DDI_RS11575 73b1b04815e96c6e38527dcf1fe25a2b 244 Gene3D G3DSA:3.20.20.450 8 238 5.8E-18 T 28-03-2018 IPR001633 EAL domain DDI_RS11575 73b1b04815e96c6e38527dcf1fe25a2b 244 Pfam PF00563 EAL domain 15 225 6.9E-15 T 28-03-2018 IPR001633 EAL domain DDI_RS00505 54358991b00306688b373d683cbb117c 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS00505 54358991b00306688b373d683cbb117c 397 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 393 1.0E-172 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 DDI_RS00505 54358991b00306688b373d683cbb117c 397 Gene3D G3DSA:3.40.640.10 4 259 2.1E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS00505 54358991b00306688b373d683cbb117c 397 SUPERFAMILY SSF53383 24 393 3.15E-91 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS00505 54358991b00306688b373d683cbb117c 397 Gene3D G3DSA:3.90.1150.10 260 395 2.9E-34 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS00505 54358991b00306688b373d683cbb117c 397 PIRSF PIRSF001434 1 395 3.3E-118 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS00505 54358991b00306688b373d683cbb117c 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 391 3.0E-115 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDI_RS19420 660ccfaf53dc26dc5058c3c6057860bd 328 PIRSF PIRSF035875 31 322 6.3E-23 T 28-03-2018 IPR017039 Virulence factor BrkB DDI_RS19420 660ccfaf53dc26dc5058c3c6057860bd 328 Pfam PF03631 Virulence factor BrkB 55 313 6.0E-42 T 28-03-2018 IPR017039 Virulence factor BrkB DDI_RS19420 660ccfaf53dc26dc5058c3c6057860bd 328 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 42 316 1.6E-131 T 28-03-2018 IPR005274 Inner membrane protein YhjD DDI_RS16885 bd00b2b91aa6def24258fe2cfe46ec73 283 Pfam PF11860 N-acetylmuramidase 115 280 3.4E-54 T 28-03-2018 IPR024408 N-acetylmuramidase DDI_RS16885 bd00b2b91aa6def24258fe2cfe46ec73 283 Gene3D G3DSA:1.10.101.10 9 87 1.6E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS16885 bd00b2b91aa6def24258fe2cfe46ec73 283 Gene3D G3DSA:1.10.530.10 101 282 2.2E-4 T 28-03-2018 DDI_RS16885 bd00b2b91aa6def24258fe2cfe46ec73 283 SUPERFAMILY SSF47090 19 78 2.07E-7 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS04785 090f36a6753743950ecb790eb93fc352 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.964 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DDI_RS04785 090f36a6753743950ecb790eb93fc352 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 3.5E-26 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DDI_RS04785 090f36a6753743950ecb790eb93fc352 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 1.3E-35 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 Gene3D G3DSA:2.40.50.140 293 345 1.1E-8 T 28-03-2018 DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 Pfam PF08402 TOBE domain 281 352 2.0E-5 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 Gene3D G3DSA:3.40.50.300 1 238 5.0E-71 T 28-03-2018 DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 SUPERFAMILY SSF52540 4 242 1.15E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 Pfam PF00005 ABC transporter 19 161 4.4E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 SUPERFAMILY SSF50331 236 358 9.48E-28 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 SMART SM00382 28 211 1.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS13270 73b8c32a69872f039054bf6b38fbf8f9 369 Gene3D G3DSA:2.40.50.100 239 292 3.2E-10 T 28-03-2018 DDI_RS06760 0105bd8091eb29a4cdcb8771980a21c0 270 SMART SM00382 33 231 5.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06760 0105bd8091eb29a4cdcb8771980a21c0 270 Pfam PF00005 ABC transporter 24 181 2.5E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06760 0105bd8091eb29a4cdcb8771980a21c0 270 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06760 0105bd8091eb29a4cdcb8771980a21c0 270 SUPERFAMILY SSF52540 7 253 2.24E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06760 0105bd8091eb29a4cdcb8771980a21c0 270 Gene3D G3DSA:3.40.50.300 4 267 1.9E-61 T 28-03-2018 DDI_RS20425 a90b59cc80acf02fbf91f2763097b0ef 373 Pfam PF00266 Aminotransferase class-V 40 328 6.3E-20 T 28-03-2018 IPR000192 Aminotransferase class V domain DDI_RS20425 a90b59cc80acf02fbf91f2763097b0ef 373 Gene3D G3DSA:3.40.640.10 25 264 6.2E-20 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS20425 a90b59cc80acf02fbf91f2763097b0ef 373 PIRSF PIRSF000525 6 369 1.3E-62 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DDI_RS20425 a90b59cc80acf02fbf91f2763097b0ef 373 Gene3D G3DSA:3.90.1150.10 265 368 3.9E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS20425 a90b59cc80acf02fbf91f2763097b0ef 373 SUPERFAMILY SSF53383 11 364 6.61E-59 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS15780 dac985227691820dd32f80f293923f15 293 SUPERFAMILY SSF46689 232 260 4.12E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS15780 dac985227691820dd32f80f293923f15 293 Gene3D G3DSA:1.10.10.60 214 263 9.2E-8 T 28-03-2018 DDI_RS15780 dac985227691820dd32f80f293923f15 293 Pfam PF13556 PucR C-terminal helix-turn-helix domain 226 283 2.9E-18 T 28-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain DDI_RS17070 9e7e88127fce4d64ffe55af359da6ad1 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.0E-92 T 28-03-2018 IPR005583 Peroxide stress protein YaaA DDI_RS17070 9e7e88127fce4d64ffe55af359da6ad1 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.64 T 28-03-2018 IPR005583 Peroxide stress protein YaaA DDI_RS18680 385aebd3eba55b3059e69fc75af4d36a 238 SUPERFAMILY SSF56784 10 238 1.4E-38 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18680 385aebd3eba55b3059e69fc75af4d36a 238 Gene3D G3DSA:3.40.50.1000 2 238 2.0E-23 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18680 385aebd3eba55b3059e69fc75af4d36a 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 200 1.3E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18680 385aebd3eba55b3059e69fc75af4d36a 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 207 2.2E-11 T 28-03-2018 IPR023214 HAD-like domain DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 Gene3D G3DSA:1.10.10.10 7 63 2.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 SMART SM00344 12 121 1.7E-54 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.0E-25 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 SUPERFAMILY SSF54909 74 157 2.68E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 Gene3D G3DSA:3.30.70.920 64 158 1.0E-27 T 28-03-2018 DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 5.0E-21 T 28-03-2018 DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 SUPERFAMILY SSF46785 12 70 6.45E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS08100 544cc34fdc251af56eabe27eee81a9f5 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 Gene3D G3DSA:3.30.70.120 1 108 1.2E-49 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.3E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 PIRSF PIRSF039144 1 112 1.3E-57 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 SUPERFAMILY SSF54913 1 112 1.21E-46 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 PRINTS PR00340 P-II protein signature 2 17 1.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 PRINTS PR00340 P-II protein signature 23 41 1.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 PRINTS PR00340 P-II protein signature 52 75 1.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 PRINTS PR00340 P-II protein signature 83 103 1.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 SMART SM00938 4 105 1.9E-68 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDI_RS14180 05ccc06e6e6aa40a977a41c78f85c653 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DDI_RS05820 68bafb71a31b240fd74a1050c8ce610f 213 Gene3D G3DSA:1.10.10.60 9 68 6.5E-16 T 28-03-2018 DDI_RS05820 68bafb71a31b240fd74a1050c8ce610f 213 SUPERFAMILY SSF48498 91 201 3.26E-14 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS05820 68bafb71a31b240fd74a1050c8ce610f 213 Gene3D G3DSA:1.10.357.10 69 204 5.8E-13 T 28-03-2018 DDI_RS05820 68bafb71a31b240fd74a1050c8ce610f 213 SUPERFAMILY SSF46689 10 95 9.22E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS05820 68bafb71a31b240fd74a1050c8ce610f 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 69 9.3E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS05820 68bafb71a31b240fd74a1050c8ce610f 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 66 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 2.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 2.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 2.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 Gene3D G3DSA:3.40.50.720 1 266 6.1E-54 T 28-03-2018 DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 Pfam PF00106 short chain dehydrogenase 3 184 1.2E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 SUPERFAMILY SSF51735 1 241 7.5E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 2.3E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 2.3E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS07525 b41481b596a5dfdcdece4d68794c9067 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 2.3E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS09490 4bbc657bf7b7f22657be628b3667f51a 360 SMART SM00382 28 211 7.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09490 4bbc657bf7b7f22657be628b3667f51a 360 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS09490 4bbc657bf7b7f22657be628b3667f51a 360 SUPERFAMILY SSF52540 4 243 7.72E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09490 4bbc657bf7b7f22657be628b3667f51a 360 Pfam PF00005 ABC transporter 19 161 6.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS09490 4bbc657bf7b7f22657be628b3667f51a 360 Gene3D G3DSA:3.40.50.300 2 274 4.4E-72 T 28-03-2018 DDI_RS09490 4bbc657bf7b7f22657be628b3667f51a 360 SUPERFAMILY SSF50331 237 348 5.27E-8 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS21155 dc88d8ae127727643e09f23f36e8bc8a 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 1.0E-48 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS21155 dc88d8ae127727643e09f23f36e8bc8a 310 Gene3D G3DSA:3.90.25.10 168 310 5.4E-23 T 28-03-2018 DDI_RS21155 dc88d8ae127727643e09f23f36e8bc8a 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.423 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DDI_RS21155 dc88d8ae127727643e09f23f36e8bc8a 310 SUPERFAMILY SSF51735 1 305 5.14E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS21155 dc88d8ae127727643e09f23f36e8bc8a 310 Gene3D G3DSA:3.40.50.720 1 167 4.7E-18 T 28-03-2018 DDI_RS21155 dc88d8ae127727643e09f23f36e8bc8a 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 4.5E-136 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DDI_RS10230 597fcc489eb001c235a8b327050f328d 558 Pfam PF17287 POTRA domain 152 204 8.0E-23 T 28-03-2018 IPR035251 ShlB, POTRA domain DDI_RS10230 597fcc489eb001c235a8b327050f328d 558 Gene3D G3DSA:3.10.20.310 79 151 4.9E-15 T 28-03-2018 DDI_RS10230 597fcc489eb001c235a8b327050f328d 558 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 209 521 1.9E-100 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal DDI_RS10230 597fcc489eb001c235a8b327050f328d 558 Pfam PF08479 POTRA domain, ShlB-type 76 151 2.6E-23 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type DDI_RS10230 597fcc489eb001c235a8b327050f328d 558 Gene3D G3DSA:2.40.160.50 177 558 1.0E-55 T 28-03-2018 DDI_RS10230 597fcc489eb001c235a8b327050f328d 558 PIRSF PIRSF029745 4 558 1.4E-147 T 28-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 DDI_RS18040 98c91702062006e28dbbd0b7d57258f6 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.064 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18040 98c91702062006e28dbbd0b7d57258f6 104 SUPERFAMILY SSF50104 4 100 3.07E-33 T 28-03-2018 IPR008991 Translation protein SH3-like domain DDI_RS18040 98c91702062006e28dbbd0b7d57258f6 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 28-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18040 98c91702062006e28dbbd0b7d57258f6 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.4E-23 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18040 98c91702062006e28dbbd0b7d57258f6 104 Gene3D G3DSA:2.30.30.30 2 93 2.6E-30 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 DDI_RS18040 98c91702062006e28dbbd0b7d57258f6 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.4E-39 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18040 98c91702062006e28dbbd0b7d57258f6 104 SMART SM00739 4 31 0.0014 T 28-03-2018 IPR005824 KOW DDI_RS09440 8428441d4a1a494a6b71ed2ae669c4dd 996 Gene3D G3DSA:3.30.420.40 250 573 2.5E-5 T 28-03-2018 DDI_RS09440 8428441d4a1a494a6b71ed2ae669c4dd 996 PIRSF PIRSF034585 1 996 0.0 T 28-03-2018 IPR009216 Virulence factor SrfB DDI_RS09440 8428441d4a1a494a6b71ed2ae669c4dd 996 Gene3D G3DSA:3.30.420.40 574 790 7.2E-6 T 28-03-2018 DDI_RS09440 8428441d4a1a494a6b71ed2ae669c4dd 996 Pfam PF07520 Virulence factor SrfB 1 993 0.0 T 28-03-2018 IPR009216 Virulence factor SrfB DDI_RS06615 d461ac7d9395498fc611e910f4f85a15 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 169 9.3E-42 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN DDI_RS06615 d461ac7d9395498fc611e910f4f85a15 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 166 7.5E-37 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN DDI_RS10620 3d5a1d91bda57cdafe0a42406f167545 168 SMART SM00065 23 161 9.2E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS10620 3d5a1d91bda57cdafe0a42406f167545 168 Gene3D G3DSA:3.30.450.40 1 157 2.0E-26 T 28-03-2018 IPR029016 GAF domain-like DDI_RS10620 3d5a1d91bda57cdafe0a42406f167545 168 SUPERFAMILY SSF55781 2 150 1.11E-39 T 28-03-2018 IPR029016 GAF domain-like DDI_RS10620 3d5a1d91bda57cdafe0a42406f167545 168 Pfam PF13185 GAF domain 39 143 6.4E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS03640 a7c119880a8c6beb62c092305505e66b 148 Pfam PF00583 Acetyltransferase (GNAT) family 44 129 5.9E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS03640 a7c119880a8c6beb62c092305505e66b 148 Gene3D G3DSA:3.40.630.30 4 141 3.5E-22 T 28-03-2018 DDI_RS03640 a7c119880a8c6beb62c092305505e66b 148 SUPERFAMILY SSF55729 5 141 4.03E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 SMART SM00434 12 462 1.4E-234 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 Gene3D G3DSA:3.90.199.10 35 284 1.6E-97 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 Gene3D G3DSA:2.120.10.90 496 746 1.3E-39 T 28-03-2018 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 34.065 T 28-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 743 0.0 T 28-03-2018 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 Gene3D G3DSA:1.10.268.10 345 484 2.5E-46 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 468 3.5E-133 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 631 0.4 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 1.6E-7 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 SUPERFAMILY SSF56719 32 483 2.49E-154 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDI_RS00470 54384ff93bdf39f7040079fe391ee819 758 SUPERFAMILY SSF101904 500 742 7.72E-50 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 PRINTS PR01009 Flagellar M-ring protein signature 380 404 3.0E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 PRINTS PR01009 Flagellar M-ring protein signature 124 142 3.0E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 PRINTS PR01009 Flagellar M-ring protein signature 156 170 3.0E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 PRINTS PR01009 Flagellar M-ring protein signature 199 217 3.0E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 PRINTS PR01009 Flagellar M-ring protein signature 268 286 3.0E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 Pfam PF08345 Flagellar M-ring protein C-terminal 255 452 3.2E-46 T 28-03-2018 IPR013556 Flagellar M-ring C-terminal DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 3.7E-73 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 15 572 6.1E-175 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 Gene3D G3DSA:3.30.70.1530 55 118 1.5E-8 T 28-03-2018 DDI_RS11990 cf2218eb71214a55557d75ceabf21fbb 573 PIRSF PIRSF004862 6 573 1.2E-162 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DDI_RS05375 a5ae1f2d56470c7b8a50c20814e3e0b4 471 Gene3D G3DSA:3.40.50.20 138 233 9.1E-13 T 28-03-2018 DDI_RS05375 a5ae1f2d56470c7b8a50c20814e3e0b4 471 Pfam PF13727 CoA-binding domain 76 189 5.8E-7 T 28-03-2018 DDI_RS05375 a5ae1f2d56470c7b8a50c20814e3e0b4 471 Pfam PF02397 Bacterial sugar transferase 275 465 2.0E-65 T 28-03-2018 IPR003362 Bacterial sugar transferase DDI_RS05375 a5ae1f2d56470c7b8a50c20814e3e0b4 471 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 14 471 2.8E-151 T 28-03-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 DDI_RS05375 a5ae1f2d56470c7b8a50c20814e3e0b4 471 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 16 471 3.1E-115 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DDI_RS16315 8175713231455d772af737ac39aa8b7f 1092 Gene3D G3DSA:1.10.3210.10 35 247 0.0074 T 28-03-2018 DDI_RS16315 8175713231455d772af737ac39aa8b7f 1092 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1088 0.0 T 28-03-2018 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type DDI_RS16315 8175713231455d772af737ac39aa8b7f 1092 SUPERFAMILY SSF52540 526 623 1.15E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16315 8175713231455d772af737ac39aa8b7f 1092 SUPERFAMILY SSF52540 703 792 1.15E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16315 8175713231455d772af737ac39aa8b7f 1092 SUPERFAMILY SSF52540 424 472 1.15E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16315 8175713231455d772af737ac39aa8b7f 1092 SUPERFAMILY SSF52540 823 868 1.15E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16315 8175713231455d772af737ac39aa8b7f 1092 Gene3D G3DSA:3.40.50.300 708 877 5.6E-5 T 28-03-2018 DDI_RS16315 8175713231455d772af737ac39aa8b7f 1092 Gene3D G3DSA:3.40.50.300 398 632 1.6E-6 T 28-03-2018 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 609 1.1E-44 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 2.6E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 571 600 2.6E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 521 2.6E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 523 552 2.6E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 Pfam PF00672 HAMP domain 343 390 4.7E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 SUPERFAMILY SSF58104 363 644 9.68E-65 T 28-03-2018 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 Gene3D G3DSA:3.30.450.20 182 321 2.8E-16 T 28-03-2018 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 Pfam PF17201 Cache 3/Cache 2 fusion domain 35 320 2.5E-80 T 28-03-2018 IPR033462 Cache 3/Cache 2 fusion domain DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 SMART SM00304 343 395 1.1E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 SUPERFAMILY SSF103190 115 212 2.39E-9 T 28-03-2018 IPR029151 Periplasmic sensor domain-like DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 SMART SM00283 396 643 2.2E-72 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 Gene3D G3DSA:1.10.287.950 348 447 1.3E-9 T 28-03-2018 DDI_RS15745 12e7247437cd258519d4a8c96c57f3e4 646 Gene3D G3DSA:1.10.287.950 451 646 8.9E-42 T 28-03-2018 DDI_RS01030 cce612f50e01009d03d2e8232c021d93 199 Pfam PF01338 Bacillus thuringiensis toxin 3 198 1.1E-18 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01030 cce612f50e01009d03d2e8232c021d93 199 ProDom PD009844 CYTOLYTIC TOXIN DELTA-ENDOTOXIN SPORULATION PLASMID TYPE-1AA TOCIN 3D-STRUCTURE CRYET29 TYPE-1BA 8 198 1.0E-8 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01030 cce612f50e01009d03d2e8232c021d93 199 SUPERFAMILY SSF55676 15 196 1.03E-14 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01030 cce612f50e01009d03d2e8232c021d93 199 Gene3D G3DSA:3.40.198.10 15 193 4.6E-33 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS15530 a9653db313753cc26724330e627e3ad4 380 Gene3D G3DSA:3.90.1510.10 42 276 3.6E-98 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 DDI_RS15530 a9653db313753cc26724330e627e3ad4 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.4E-166 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DDI_RS15530 a9653db313753cc26724330e627e3ad4 380 Pfam PF02595 Glycerate kinase family 3 374 9.2E-151 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DDI_RS15530 a9653db313753cc26724330e627e3ad4 380 PIRSF PIRSF006078 1 378 7.1E-142 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DDI_RS15530 a9653db313753cc26724330e627e3ad4 380 SUPERFAMILY SSF110738 1 375 1.29E-143 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DDI_RS15710 a332df7b75f19203066a05b858f99b39 235 Pfam PF04225 Opacity-associated protein A LysM-like domain 150 233 2.9E-33 T 28-03-2018 IPR007340 Opacity-associated protein A DDI_RS15710 a332df7b75f19203066a05b858f99b39 235 Pfam PF08525 Opacity-associated protein A N-terminal motif 78 104 8.3E-9 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal DDI_RS09100 a949838f9473edf63b3d65ec0de0595d 210 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 202 210 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 DDI_RS09100 a949838f9473edf63b3d65ec0de0595d 210 Pfam PF03922 OmpW family 22 210 4.7E-68 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 DDI_RS09100 a949838f9473edf63b3d65ec0de0595d 210 SUPERFAMILY SSF56925 22 210 1.12E-28 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS09100 a949838f9473edf63b3d65ec0de0595d 210 Gene3D G3DSA:2.40.160.20 21 210 3.1E-35 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS03860 17c38054965d57e7bd9b71658dd24c6c 144 SMART SM00347 30 128 3.6E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS03860 17c38054965d57e7bd9b71658dd24c6c 144 Pfam PF01047 MarR family 37 95 2.3E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS03860 17c38054965d57e7bd9b71658dd24c6c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 2.0E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS03860 17c38054965d57e7bd9b71658dd24c6c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 2.0E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS03860 17c38054965d57e7bd9b71658dd24c6c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 2.0E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS03860 17c38054965d57e7bd9b71658dd24c6c 144 SUPERFAMILY SSF46785 8 140 1.29E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03860 17c38054965d57e7bd9b71658dd24c6c 144 Gene3D G3DSA:1.10.10.10 1 144 1.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20535 360d586ff38eda0b30f9d021e5407160 186 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 181 1.0E-87 T 28-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 DDI_RS20535 360d586ff38eda0b30f9d021e5407160 186 Pfam PF03352 Methyladenine glycosylase 6 182 3.0E-80 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DDI_RS20535 360d586ff38eda0b30f9d021e5407160 186 SUPERFAMILY SSF48150 1 184 1.33E-82 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DDI_RS20535 360d586ff38eda0b30f9d021e5407160 186 Gene3D G3DSA:1.10.340.30 1 182 1.6E-85 T 28-03-2018 DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 SUPERFAMILY SSF53187 301 330 2.09E-57 T 28-03-2018 DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 SUPERFAMILY SSF53187 385 449 2.09E-57 T 28-03-2018 DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 SUPERFAMILY SSF53187 7 201 2.09E-57 T 28-03-2018 DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 SUPERFAMILY SSF55031 191 294 3.14E-18 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 Pfam PF01546 Peptidase family M20/M25/M40 103 256 1.2E-6 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 PIRSF PIRSF037227 2 483 8.3E-224 T 28-03-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 434 7.4E-102 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 Pfam PF07687 Peptidase dimerisation domain 189 280 1.0E-4 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 Gene3D G3DSA:3.40.630.10 318 467 9.8E-13 T 28-03-2018 DDI_RS17480 aebd6bdda517884114af6b0089296f65 483 Gene3D G3DSA:3.40.630.10 4 300 1.2E-44 T 28-03-2018 DDI_RS19635 efbc5fd5201c9200696b401889813fb2 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 279 1.6E-10 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS19635 efbc5fd5201c9200696b401889813fb2 287 Gene3D G3DSA:3.60.10.10 1 287 7.7E-37 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS19635 efbc5fd5201c9200696b401889813fb2 287 SUPERFAMILY SSF56219 1 284 1.16E-33 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 SUPERFAMILY SSF54106 414 459 5.36E-10 T 28-03-2018 IPR018392 LysM domain DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 SMART SM00257 351 394 2.1E-13 T 28-03-2018 IPR018392 LysM domain DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 SMART SM00257 415 459 4.0E-11 T 28-03-2018 IPR018392 LysM domain DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 Pfam PF01464 Transglycosylase SLT domain 109 219 1.1E-26 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 Gene3D G3DSA:1.10.530.10 71 252 1.2E-32 T 28-03-2018 DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 SUPERFAMILY SSF54106 351 393 6.8E-11 T 28-03-2018 IPR018392 LysM domain DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 SUPERFAMILY SSF53955 105 257 6.88E-41 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 Gene3D G3DSA:3.10.350.10 411 467 1.4E-14 T 28-03-2018 DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 Gene3D G3DSA:3.10.350.10 344 410 4.2E-14 T 28-03-2018 DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 Pfam PF01476 LysM domain 416 457 3.1E-11 T 28-03-2018 IPR018392 LysM domain DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 Pfam PF01476 LysM domain 352 393 4.6E-13 T 28-03-2018 IPR018392 LysM domain DDI_RS14645 ba11cd9bff121bf942e444eed0190265 468 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 127 155 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DDI_RS12005 1abaac175fa2efea6f09434906a7be73 456 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 450 2.4E-198 T 28-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS12005 1abaac175fa2efea6f09434906a7be73 456 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 372 6.1E-72 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS12005 1abaac175fa2efea6f09434906a7be73 456 SUPERFAMILY SSF52540 108 378 4.62E-92 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS12005 1abaac175fa2efea6f09434906a7be73 456 SMART SM00382 173 356 2.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS12005 1abaac175fa2efea6f09434906a7be73 456 Gene3D G3DSA:3.40.50.300 54 372 1.2E-79 T 28-03-2018 DDI_RS12005 1abaac175fa2efea6f09434906a7be73 456 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 452 2.6E-191 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS12005 1abaac175fa2efea6f09434906a7be73 456 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 DDI_RS06450 b1206397794f401a5627bccd5ed46cea 245 Gene3D G3DSA:1.20.1250.20 41 238 1.0E-13 T 28-03-2018 DDI_RS06450 b1206397794f401a5627bccd5ed46cea 245 Pfam PF07690 Major Facilitator Superfamily 11 193 2.8E-8 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS06450 b1206397794f401a5627bccd5ed46cea 245 SUPERFAMILY SSF103473 10 233 5.89E-16 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS14865 28185e7622eb640957a96134aebd09f4 318 SUPERFAMILY SSF53822 24 309 1.13E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS14865 28185e7622eb640957a96134aebd09f4 318 Gene3D G3DSA:3.40.50.2300 131 317 5.3E-32 T 28-03-2018 DDI_RS14865 28185e7622eb640957a96134aebd09f4 318 Gene3D G3DSA:3.40.50.2300 6 130 5.8E-20 T 28-03-2018 DDI_RS14865 28185e7622eb640957a96134aebd09f4 318 Pfam PF13407 Periplasmic binding protein domain 26 265 8.4E-43 T 28-03-2018 IPR025997 Periplasmic binding protein DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 SUPERFAMILY SSF55658 1 57 4.01E-19 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.672 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 4.0E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.4E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 Gene3D G3DSA:3.10.430.100 63 148 1.3E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 Gene3D G3DSA:3.40.5.10 1 49 1.1E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 SUPERFAMILY SSF55653 61 149 2.09E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal DDI_RS15720 eb25704cb8409c5e7b317a0bec038662 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 5.4E-58 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00690 Adhesin family signature 67 84 2.4E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00690 Adhesin family signature 54 67 2.4E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00690 Adhesin family signature 257 276 2.4E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00690 Adhesin family signature 178 199 2.4E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00690 Adhesin family signature 23 41 2.4E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00690 Adhesin family signature 231 249 2.4E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00691 Adhesin B signature 270 288 8.1E-23 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00691 Adhesin B signature 227 244 8.1E-23 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00691 Adhesin B signature 23 44 8.1E-23 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00691 Adhesin B signature 48 66 8.1E-23 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00691 Adhesin B signature 178 195 8.1E-23 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 PRINTS PR00691 Adhesin B signature 67 86 8.1E-23 T 28-03-2018 IPR006129 Adhesin B GO:0007155 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 Gene3D G3DSA:3.40.50.1980 17 170 1.2E-48 T 28-03-2018 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 289 4.9E-80 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 SUPERFAMILY SSF53807 18 291 9.81E-85 T 28-03-2018 DDI_RS16510 8777641303d4d9e6595a90c7cc90537c 292 Gene3D G3DSA:3.40.50.1980 171 292 2.9E-37 T 28-03-2018 DDI_RS05960 58a27ecf35bcdcd1a3536b038f900f54 340 Gene3D G3DSA:1.10.1530.10 4 81 1.2E-19 T 28-03-2018 DDI_RS05960 58a27ecf35bcdcd1a3536b038f900f54 340 Pfam PF02615 Malate/L-lactate dehydrogenase 5 332 3.2E-101 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 DDI_RS05960 58a27ecf35bcdcd1a3536b038f900f54 340 Gene3D G3DSA:3.30.1370.60 82 303 8.6E-74 T 28-03-2018 DDI_RS05960 58a27ecf35bcdcd1a3536b038f900f54 340 SUPERFAMILY SSF89733 2 338 1.16E-94 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 DDI_RS05515 b4ed601821d51d99ea530031fbd37aac 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 311 6.2E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05515 b4ed601821d51d99ea530031fbd37aac 312 Gene3D G3DSA:1.10.3720.10 1 300 2.2E-41 T 28-03-2018 DDI_RS05515 b4ed601821d51d99ea530031fbd37aac 312 SUPERFAMILY SSF161098 99 296 6.54E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09660 3a745451acb64a943cf8ec39dd6bf601 322 SUPERFAMILY SSF53613 5 316 1.19E-78 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS09660 3a745451acb64a943cf8ec39dd6bf601 322 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS09660 3a745451acb64a943cf8ec39dd6bf601 322 Pfam PF00294 pfkB family carbohydrate kinase 6 311 8.9E-69 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB DDI_RS09660 3a745451acb64a943cf8ec39dd6bf601 322 PRINTS PR00990 Ribokinase signature 227 238 2.7E-7 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS09660 3a745451acb64a943cf8ec39dd6bf601 322 PRINTS PR00990 Ribokinase signature 33 52 2.7E-7 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS09660 3a745451acb64a943cf8ec39dd6bf601 322 PRINTS PR00990 Ribokinase signature 105 118 2.7E-7 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDI_RS09660 3a745451acb64a943cf8ec39dd6bf601 322 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS09660 3a745451acb64a943cf8ec39dd6bf601 322 Gene3D G3DSA:3.40.1190.20 7 320 8.7E-69 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS16005 2154b559e48ff329ccb48132c99ee6d6 333 SUPERFAMILY SSF50129 10 142 3.14E-36 T 28-03-2018 IPR011032 GroES-like DDI_RS16005 2154b559e48ff329ccb48132c99ee6d6 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.2E-8 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DDI_RS16005 2154b559e48ff329ccb48132c99ee6d6 333 Gene3D G3DSA:3.90.180.10 1 137 5.3E-36 T 28-03-2018 DDI_RS16005 2154b559e48ff329ccb48132c99ee6d6 333 SMART SM00829 11 325 1.3E-27 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DDI_RS16005 2154b559e48ff329ccb48132c99ee6d6 333 Gene3D G3DSA:3.40.50.720 138 311 6.2E-30 T 28-03-2018 DDI_RS16005 2154b559e48ff329ccb48132c99ee6d6 333 Pfam PF00107 Zinc-binding dehydrogenase 152 258 7.0E-30 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DDI_RS16005 2154b559e48ff329ccb48132c99ee6d6 333 SUPERFAMILY SSF51735 112 273 3.64E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 SMART SM00304 208 261 3.6E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 480 1.1E-181 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 Gene3D G3DSA:3.30.450.20 37 138 2.7E-5 T 28-03-2018 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 480 1.0E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 SMART SM00387 372 483 1.7E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 SUPERFAMILY SSF55874 317 481 1.09E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 327 5.7E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 Gene3D G3DSA:3.30.565.10 332 485 2.4E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 Gene3D G3DSA:1.10.287.130 252 324 9.9E-11 T 28-03-2018 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 SMART SM00388 262 328 6.1E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 5.4E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 5.4E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 5.4E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 5.4E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS02495 7ceffb6c6b0ce81ca954071068654f5c 487 SUPERFAMILY SSF47384 245 329 1.2E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS01950 0b30667794c820f7918c98904fd3d604 379 SUPERFAMILY SSF88874 208 378 1.15E-32 T 28-03-2018 DDI_RS01950 0b30667794c820f7918c98904fd3d604 379 Gene3D G3DSA:3.90.1340.10 202 260 1.3E-17 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS01950 0b30667794c820f7918c98904fd3d604 379 Gene3D G3DSA:4.10.1070.10 261 371 3.9E-17 T 28-03-2018 DDI_RS01950 0b30667794c820f7918c98904fd3d604 379 Pfam PF07484 Phage Tail Collar Domain 216 263 6.6E-14 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS01950 0b30667794c820f7918c98904fd3d604 379 Pfam PF12571 Phage tail-collar fibre protein 1 149 9.2E-65 T 28-03-2018 IPR022225 Phage tail fibre protein DDI_RS02260 f1142497a5eaf19193e52f8badc8db3a 423 SUPERFAMILY SSF116734 20 203 1.96E-38 T 28-03-2018 DDI_RS02260 f1142497a5eaf19193e52f8badc8db3a 423 SUPERFAMILY SSF116734 227 422 7.85E-35 T 28-03-2018 DDI_RS02260 f1142497a5eaf19193e52f8badc8db3a 423 Gene3D G3DSA:3.90.220.20 6 180 1.2E-29 T 28-03-2018 DDI_RS02260 f1142497a5eaf19193e52f8badc8db3a 423 Gene3D G3DSA:3.90.220.20 181 402 7.3E-34 T 28-03-2018 DDI_RS02260 f1142497a5eaf19193e52f8badc8db3a 423 Pfam PF01420 Type I restriction modification DNA specificity domain 39 188 3.0E-16 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DDI_RS02260 f1142497a5eaf19193e52f8badc8db3a 423 Pfam PF01420 Type I restriction modification DNA specificity domain 240 404 3.3E-15 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 Gene3D G3DSA:3.90.1150.10 418 597 1.8E-54 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 SUPERFAMILY SSF53383 106 564 7.66E-120 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 100 1.3E-10 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 SUPERFAMILY SSF55904 568 715 4.45E-44 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 Gene3D G3DSA:3.90.100.10 598 717 1.0E-34 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 573 700 8.5E-47 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 106 546 2.2E-193 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 347 361 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 Gene3D G3DSA:3.40.50.220 3 105 1.8E-24 T 28-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 SUPERFAMILY SSF52172 1 105 1.49E-20 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 PIRSF PIRSF009393 1 717 4.5E-285 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 DDI_RS03495 bee00eb6df0ef03e157091bbf82e1fae 717 Gene3D G3DSA:3.40.640.10 106 416 1.7E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS02365 537b5c09a3c788d35e731073e15ef896 88 Pfam PF03937 Flavinator of succinate dehydrogenase 7 76 1.6E-24 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase DDI_RS02365 537b5c09a3c788d35e731073e15ef896 88 Gene3D G3DSA:1.10.150.250 1 85 2.6E-25 T 28-03-2018 DDI_RS02365 537b5c09a3c788d35e731073e15ef896 88 SUPERFAMILY SSF109910 1 78 3.53E-26 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase DDI_RS14550 f79e0bab868b43629c71ddff5874c797 307 SMART SM00382 30 212 5.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14550 f79e0bab868b43629c71ddff5874c797 307 Pfam PF00005 ABC transporter 21 165 8.8E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14550 f79e0bab868b43629c71ddff5874c797 307 Gene3D G3DSA:3.40.50.300 1 269 7.5E-63 T 28-03-2018 DDI_RS14550 f79e0bab868b43629c71ddff5874c797 307 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS14550 f79e0bab868b43629c71ddff5874c797 307 SUPERFAMILY SSF52540 3 233 6.74E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16210 999fce77efd8a79e48834eed07b3fbb3 136 SMART SM00530 6 60 6.2E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS16210 999fce77efd8a79e48834eed07b3fbb3 136 Pfam PF01381 Helix-turn-helix 7 50 4.9E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS16210 999fce77efd8a79e48834eed07b3fbb3 136 Gene3D G3DSA:1.10.260.40 3 135 3.3E-12 T 28-03-2018 DDI_RS16210 999fce77efd8a79e48834eed07b3fbb3 136 SUPERFAMILY SSF47413 2 52 1.69E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS03890 2418ae041115488ea520463604270e62 186 Gene3D G3DSA:3.40.630.30 53 185 3.1E-22 T 28-03-2018 DDI_RS03890 2418ae041115488ea520463604270e62 186 SUPERFAMILY SSF55729 21 181 5.04E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS03890 2418ae041115488ea520463604270e62 186 Pfam PF13302 Acetyltransferase (GNAT) domain 55 157 1.1E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS06720 684754de9b6a19ff936aab66b4f83e0e 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 5 226 2.8E-96 T 28-03-2018 IPR005261 Conserved hypothetical protein CHP00659 DDI_RS06720 684754de9b6a19ff936aab66b4f83e0e 231 Pfam PF04172 LrgB-like family 12 224 2.3E-76 T 28-03-2018 IPR007300 CidB/LrgB family DDI_RS00265 9eb36219c586a70f23a55f9f9d9f82ad 269 Pfam PF00005 ABC transporter 23 170 3.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS00265 9eb36219c586a70f23a55f9f9d9f82ad 269 SMART SM00382 31 227 6.5E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS00265 9eb36219c586a70f23a55f9f9d9f82ad 269 SUPERFAMILY SSF52540 6 232 4.08E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00265 9eb36219c586a70f23a55f9f9d9f82ad 269 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS00265 9eb36219c586a70f23a55f9f9d9f82ad 269 Gene3D G3DSA:3.40.50.300 3 265 1.1E-60 T 28-03-2018 DDI_RS06510 e6c290a2ecba87f9b739accea134abf9 285 SUPERFAMILY SSF81345 3 261 3.92E-37 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS06510 e6c290a2ecba87f9b739accea134abf9 285 Gene3D G3DSA:1.10.3470.10 3 273 8.0E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS06510 e6c290a2ecba87f9b739accea134abf9 285 Pfam PF00950 ABC 3 transport family 10 265 3.6E-85 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 420 1.8E-191 T 28-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 PIRSF PIRSF000521 122 421 2.0E-38 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 PIRSF PIRSF000521 3 129 1.5E-5 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 SUPERFAMILY SSF53383 23 419 1.39E-127 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 Pfam PF00202 Aminotransferase class-III 21 419 1.4E-126 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 Gene3D G3DSA:3.40.640.10 172 305 9.6E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 Gene3D G3DSA:3.90.1150.10 4 157 9.2E-39 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS10480 fe5727c6eae39034f709b9d52073d511 421 Gene3D G3DSA:3.90.1150.10 306 421 4.2E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS10380 57c461f9268db2495e45a9d79af23d96 267 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 83 102 1.0E-30 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS10380 57c461f9268db2495e45a9d79af23d96 267 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 185 207 1.0E-30 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS10380 57c461f9268db2495e45a9d79af23d96 267 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 207 226 1.0E-30 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS10380 57c461f9268db2495e45a9d79af23d96 267 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 23 44 1.0E-30 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS10380 57c461f9268db2495e45a9d79af23d96 267 Pfam PF01311 Bacterial export proteins, family 1 15 242 4.0E-42 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS10380 57c461f9268db2495e45a9d79af23d96 267 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 8 255 7.0E-64 T 28-03-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 DDI_RS08570 fa4c53a082315988e874963177dd21be 99 Pfam PF05488 PAAR motif 24 88 9.3E-25 T 28-03-2018 IPR008727 PAAR motif DDI_RS10340 a67ad11fbae875224336705c595738b5 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 28-03-2018 IPR025505 FHIPEP conserved site DDI_RS10340 a67ad11fbae875224336705c595738b5 700 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 18 689 1.9E-253 T 28-03-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 DDI_RS10340 a67ad11fbae875224336705c595738b5 700 Pfam PF00771 FHIPEP family 30 680 4.4E-206 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS10340 a67ad11fbae875224336705c595738b5 700 PIRSF PIRSF005419 5 694 9.8E-209 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS10340 a67ad11fbae875224336705c595738b5 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 2.4E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS10340 a67ad11fbae875224336705c595738b5 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 2.4E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS10340 a67ad11fbae875224336705c595738b5 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 2.4E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS10340 a67ad11fbae875224336705c595738b5 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 2.4E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS10340 a67ad11fbae875224336705c595738b5 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 2.4E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS10340 a67ad11fbae875224336705c595738b5 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 2.4E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DDI_RS04755 babb34e5421305329a1bc2dc227c6c3e 228 SUPERFAMILY SSF53474 5 204 2.89E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS04755 babb34e5421305329a1bc2dc227c6c3e 228 Pfam PF02230 Phospholipase/Carboxylesterase 5 204 9.9E-36 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 DDI_RS04755 babb34e5421305329a1bc2dc227c6c3e 228 Gene3D G3DSA:3.40.50.1820 1 210 8.6E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 SUPERFAMILY SSF52540 22 235 1.22E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 Gene3D G3DSA:2.40.30.10 240 329 4.2E-22 T 28-03-2018 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 7.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 7.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 7.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 7.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 7.1E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 Gene3D G3DSA:3.40.50.300 4 239 3.3E-39 T 28-03-2018 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 3.6E-204 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 SUPERFAMILY SSF50465 335 435 1.12E-29 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 52.587 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 5.2E-15 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 Gene3D G3DSA:2.40.30.10 332 436 1.3E-18 T 28-03-2018 DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 SUPERFAMILY SSF50447 240 327 1.16E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site DDI_RS15435 8eca0a77c0fc6c695d948a89a68e28d3 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 7.1E-43 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDI_RS09650 0c994ef29150952bbec43da1e4d85090 477 Gene3D G3DSA:1.20.1250.20 22 221 2.4E-15 T 28-03-2018 DDI_RS09650 0c994ef29150952bbec43da1e4d85090 477 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 20 455 9.8E-120 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 DDI_RS09650 0c994ef29150952bbec43da1e4d85090 477 Pfam PF13347 MFS/sugar transport protein 22 441 7.9E-95 T 28-03-2018 DDI_RS09650 0c994ef29150952bbec43da1e4d85090 477 SUPERFAMILY SSF103473 20 438 1.44E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS09650 0c994ef29150952bbec43da1e4d85090 477 Gene3D G3DSA:1.20.1250.20 222 476 5.6E-18 T 28-03-2018 DDI_RS12990 0f077ad1b3fe0cf9355300a71639de59 417 Gene3D G3DSA:2.40.160.60 26 417 4.6E-87 T 28-03-2018 DDI_RS12990 0f077ad1b3fe0cf9355300a71639de59 417 SUPERFAMILY SSF56935 26 417 1.88E-104 T 28-03-2018 DDI_RS12990 0f077ad1b3fe0cf9355300a71639de59 417 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 417 5.0E-137 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 Gene3D G3DSA:3.90.780.10 374 605 4.9E-49 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 Gene3D G3DSA:3.60.21.10 13 373 1.9E-81 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 PRINTS PR01607 Apyrase family signature 216 233 1.1E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 PRINTS PR01607 Apyrase family signature 429 452 1.1E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 PRINTS PR01607 Apyrase family signature 23 41 1.1E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 PRINTS PR01607 Apyrase family signature 244 267 1.1E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 PRINTS PR01607 Apyrase family signature 531 550 1.1E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 PRINTS PR01607 Apyrase family signature 284 304 1.1E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 Pfam PF00149 Calcineurin-like phosphoesterase 25 260 1.2E-11 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 SUPERFAMILY SSF56300 19 354 1.9E-86 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 Pfam PF02872 5'-nucleotidase, C-terminal domain 357 550 2.7E-20 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 ProSitePatterns PS00786 5'-nucleotidase signature 2. 110 121 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 ProSitePatterns PS00785 5'-nucleotidase signature 1. 25 37 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 23 648 0.0 T 28-03-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 DDI_RS15690 b41f94b473950d52e05061aa478a730a 648 SUPERFAMILY SSF55816 356 597 2.09E-37 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDI_RS06700 316c6e92daf78c56c91426ab64e79058 231 Pfam PF02589 LUD domain 65 228 1.2E-26 T 28-03-2018 IPR003741 LUD domain DDI_RS06700 316c6e92daf78c56c91426ab64e79058 231 Gene3D G3DSA:3.40.50.10420 40 229 6.6E-36 T 28-03-2018 DDI_RS06700 316c6e92daf78c56c91426ab64e79058 231 SUPERFAMILY SSF100950 43 229 7.11E-35 T 28-03-2018 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 Gene3D G3DSA:1.20.5.1040 5 55 1.1E-9 T 28-03-2018 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 Gene3D G3DSA:1.20.5.1040 130 183 8.4E-12 T 28-03-2018 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 Pfam PF08521 Two-component sensor kinase N-terminal 18 159 2.0E-6 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 Gene3D G3DSA:1.10.287.130 223 296 1.1E-10 T 28-03-2018 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 SMART SM00387 348 449 7.4E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 SMART SM00388 236 302 7.1E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 Gene3D G3DSA:3.30.565.10 297 449 6.3E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 SUPERFAMILY SSF55874 291 449 2.75E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 SUPERFAMILY SSF47384 219 301 3.14E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.0E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 1.0E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 1.8E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS19940 8cc21d7941f119b3203c74ccdaf8b6fd 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 448 1.2E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS05835 36588f79b09a8043c2e106e5b9637620 338 Gene3D G3DSA:3.40.50.300 1 333 2.6E-37 T 28-03-2018 DDI_RS05835 36588f79b09a8043c2e106e5b9637620 338 Pfam PF13614 AAA domain 5 193 8.9E-27 T 28-03-2018 IPR025669 AAA domain DDI_RS05835 36588f79b09a8043c2e106e5b9637620 338 SUPERFAMILY SSF52540 4 196 1.3E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03195 0122c62dea216d4bb55f3bca954b66c1 275 Gene3D G3DSA:1.10.3720.10 6 270 7.1E-45 T 28-03-2018 DDI_RS03195 0122c62dea216d4bb55f3bca954b66c1 275 SUPERFAMILY SSF161098 5 271 5.36E-64 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS03195 0122c62dea216d4bb55f3bca954b66c1 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 269 7.3E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13630 4fb56c31562acd25a91171d7f5282b47 413 Gene3D G3DSA:2.40.50.100 37 120 1.5E-6 T 28-03-2018 DDI_RS13630 4fb56c31562acd25a91171d7f5282b47 413 SUPERFAMILY SSF111369 79 313 5.23E-51 T 28-03-2018 DDI_RS13630 4fb56c31562acd25a91171d7f5282b47 413 Gene3D G3DSA:1.10.287.470 129 192 1.2E-8 T 28-03-2018 DDI_RS13630 4fb56c31562acd25a91171d7f5282b47 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 75 389 1.5E-75 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDI_RS13630 4fb56c31562acd25a91171d7f5282b47 413 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 411 53.202 T 28-03-2018 IPR022824 Multidrug resistance protein MdtA DDI_RS13630 4fb56c31562acd25a91171d7f5282b47 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 86 308 2.3E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDI_RS13630 4fb56c31562acd25a91171d7f5282b47 413 Gene3D G3DSA:2.40.50.100 193 395 7.3E-7 T 28-03-2018 DDI_RS01300 f828cdcb8c3d47fb0ed5ccf24dcf4aa6 332 Pfam PF01032 FecCD transport family 17 331 7.7E-85 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 DDI_RS01300 f828cdcb8c3d47fb0ed5ccf24dcf4aa6 332 SUPERFAMILY SSF81345 3 331 5.75E-76 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS01300 f828cdcb8c3d47fb0ed5ccf24dcf4aa6 332 Gene3D G3DSA:1.10.3470.10 2 332 1.4E-68 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 Gene3D G3DSA:3.30.70.260 664 743 1.2E-11 T 28-03-2018 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 Pfam PF13291 ACT domain 665 741 4.0E-18 T 28-03-2018 IPR002912 ACT domain DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 SMART SM00954 251 361 7.1E-67 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 SUPERFAMILY SSF109604 20 207 4.39E-47 T 28-03-2018 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 Gene3D G3DSA:3.10.20.30 399 474 6.5E-24 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 60 740 3.2E-188 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 Gene3D G3DSA:3.30.460.10 208 341 2.6E-43 T 28-03-2018 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.6E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 Pfam PF13328 HD domain 53 191 7.0E-42 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 SUPERFAMILY SSF55021 666 742 2.11E-13 T 28-03-2018 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 Pfam PF02824 TGS domain 405 464 1.5E-20 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 SUPERFAMILY SSF81301 196 409 4.09E-64 T 28-03-2018 DDI_RS15515 d3f71022c5d036bb15f2a1fb3b352a6c 745 SUPERFAMILY SSF81271 398 464 6.54E-22 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DDI_RS00380 f5b0d17e3834c46048b6e5669ac90bc8 433 Gene3D G3DSA:1.50.10.100 88 402 7.2E-58 T 28-03-2018 DDI_RS00380 f5b0d17e3834c46048b6e5669ac90bc8 433 Pfam PF05426 Alginate lyase 77 357 9.1E-86 T 28-03-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 DDI_RS00380 f5b0d17e3834c46048b6e5669ac90bc8 433 SUPERFAMILY SSF48230 71 359 1.1E-52 T 28-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 DDI_RS16075 2595a0888cbd721fec53310dd59a1edb 295 Pfam PF06995 Phage P2 GpU 6 123 6.3E-31 T 28-03-2018 IPR009734 Myoviridae, GpU DDI_RS07825 0ceea503288d2dec6890dff00b9a25da 70 Pfam PF13619 KTSC domain 7 64 4.7E-20 T 28-03-2018 IPR025309 KTSC domain DDI_RS07050 b202303823ddac58462ea5b17eab831e 427 Gene3D G3DSA:1.10.150.130 86 200 4.7E-20 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS07050 b202303823ddac58462ea5b17eab831e 427 Pfam PF00589 Phage integrase family 209 383 8.0E-18 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS07050 b202303823ddac58462ea5b17eab831e 427 SUPERFAMILY SSF56349 97 392 1.44E-52 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS07050 b202303823ddac58462ea5b17eab831e 427 Gene3D G3DSA:1.10.443.10 201 398 4.7E-22 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS07050 b202303823ddac58462ea5b17eab831e 427 Pfam PF13356 Arm DNA-binding domain 3 87 1.2E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain DDI_RS15365 38d7179d317282f64d9a1a9326ca5a5b 217 Gene3D G3DSA:1.10.3720.10 1 217 1.2E-40 T 28-03-2018 DDI_RS15365 38d7179d317282f64d9a1a9326ca5a5b 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 1.4E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15365 38d7179d317282f64d9a1a9326ca5a5b 217 SUPERFAMILY SSF161098 9 201 4.45E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 330 345 1.5E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 1.5E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 1.5E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 1.5E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 1.5E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 1.5E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 1.5E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 Gene3D G3DSA:3.40.50.2300 23 173 1.7E-35 T 28-03-2018 DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 Pfam PF13458 Periplasmic binding protein 27 361 1.0E-59 T 28-03-2018 IPR028081 Leucine-binding protein domain DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 SUPERFAMILY SSF53822 26 367 2.66E-89 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS19345 ad8f415d37e91d1abc5498ea97d0b3ff 370 Gene3D G3DSA:3.40.50.2300 174 351 6.7E-22 T 28-03-2018 DDI_RS07670 f827a1cd8dc0c2f4513cceafa2d4eacf 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 1.1E-33 T 28-03-2018 IPR019620 Putative metal-binding protein DDI_RS07670 f827a1cd8dc0c2f4513cceafa2d4eacf 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 2.0E-34 T 28-03-2018 IPR019620 Putative metal-binding protein DDI_RS14125 8e0f8cad6ec8597d5ddc8271a48cb5a7 373 SUPERFAMILY SSF53807 23 340 9.81E-52 T 28-03-2018 DDI_RS14125 8e0f8cad6ec8597d5ddc8271a48cb5a7 373 Pfam PF01497 Periplasmic binding protein 100 311 1.4E-25 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 DDI_RS14125 8e0f8cad6ec8597d5ddc8271a48cb5a7 373 Gene3D G3DSA:3.40.50.1980 160 346 4.1E-43 T 28-03-2018 DDI_RS14125 8e0f8cad6ec8597d5ddc8271a48cb5a7 373 Gene3D G3DSA:3.40.50.1980 15 159 1.4E-24 T 28-03-2018 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.4E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 PRINTS PR00783 Major intrinsic protein family signature 186 208 1.4E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 PRINTS PR00783 Major intrinsic protein family signature 236 256 1.4E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.4E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.4E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 PRINTS PR00783 Major intrinsic protein family signature 87 106 1.4E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 6.9E-72 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 Gene3D G3DSA:1.20.1080.10 4 261 7.6E-78 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 ProSitePatterns PS00221 MIP family signature. 68 76 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 Pfam PF00230 Major intrinsic protein 8 253 5.5E-70 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 DDI_RS19120 c9b5e8fbc67853ff1f6c18160908334d 281 SUPERFAMILY SSF81338 11 259 2.35E-78 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DDI_RS08175 4f776619d4dec3419d2a891f14694565 361 Gene3D G3DSA:3.90.1150.10 259 359 7.5E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS08175 4f776619d4dec3419d2a891f14694565 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 7.3E-154 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DDI_RS08175 4f776619d4dec3419d2a891f14694565 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.171 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DDI_RS08175 4f776619d4dec3419d2a891f14694565 361 Pfam PF00266 Aminotransferase class-V 4 349 1.4E-61 T 28-03-2018 IPR000192 Aminotransferase class V domain DDI_RS08175 4f776619d4dec3419d2a891f14694565 361 Gene3D G3DSA:3.40.640.10 16 258 9.1E-27 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS08175 4f776619d4dec3419d2a891f14694565 361 SUPERFAMILY SSF53383 1 359 1.2E-111 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS08175 4f776619d4dec3419d2a891f14694565 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DDI_RS08175 4f776619d4dec3419d2a891f14694565 361 PIRSF PIRSF000525 1 361 2.0E-147 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DDI_RS10150 54522ddd477bad468b7d7fc291cedb3c 74 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 1.1E-22 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 DDI_RS10150 54522ddd477bad468b7d7fc291cedb3c 74 Gene3D G3DSA:2.10.260.10 38 69 1.3E-4 T 28-03-2018 DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 2.6E-128 T 28-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.897 T 28-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 Pfam PF00294 pfkB family carbohydrate kinase 12 305 1.6E-54 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 SUPERFAMILY SSF52374 341 471 3.38E-22 T 28-03-2018 DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 333 472 5.3E-63 T 28-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 SUPERFAMILY SSF53613 12 310 4.05E-61 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 Gene3D G3DSA:3.40.1190.20 2 310 1.4E-60 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 4.7E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 Pfam PF01467 Cytidylyltransferase-like 345 435 2.5E-15 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDI_RS15595 a2f3b17de3900b886917d80f20cae586 475 Gene3D G3DSA:3.40.50.620 323 475 1.2E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS08910 e0b8520282ecd50743c51c079892051c 290 Gene3D G3DSA:2.70.98.10 1 290 9.9E-63 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDI_RS08910 e0b8520282ecd50743c51c079892051c 290 PIRSF PIRSF016020 9 288 3.7E-55 T 28-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 DDI_RS08910 e0b8520282ecd50743c51c079892051c 290 Pfam PF01263 Aldose 1-epimerase 29 272 4.5E-45 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DDI_RS08910 e0b8520282ecd50743c51c079892051c 290 SUPERFAMILY SSF74650 8 270 1.57E-68 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS08905 3db7e3fbd1245066c636e8fecac9f6b6 283 Pfam PF00248 Aldo/keto reductase family 16 270 3.3E-51 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS08905 3db7e3fbd1245066c636e8fecac9f6b6 283 SUPERFAMILY SSF51430 1 276 5.24E-79 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS08905 3db7e3fbd1245066c636e8fecac9f6b6 283 PIRSF PIRSF000097 1 282 1.5E-40 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS08905 3db7e3fbd1245066c636e8fecac9f6b6 283 Gene3D G3DSA:3.20.20.100 1 283 5.4E-81 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS08905 3db7e3fbd1245066c636e8fecac9f6b6 283 PRINTS PR00069 Aldo-keto reductase signature 205 229 4.6E-17 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS08905 3db7e3fbd1245066c636e8fecac9f6b6 283 PRINTS PR00069 Aldo-keto reductase signature 40 64 4.6E-17 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS08905 3db7e3fbd1245066c636e8fecac9f6b6 283 PRINTS PR00069 Aldo-keto reductase signature 126 143 4.6E-17 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS08905 3db7e3fbd1245066c636e8fecac9f6b6 283 PRINTS PR00069 Aldo-keto reductase signature 96 114 4.6E-17 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DDI_RS12600 a0c83376aa92d64b37b2da8cadbe8dc6 95 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 28-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site DDI_RS12600 a0c83376aa92d64b37b2da8cadbe8dc6 95 Pfam PF01455 HupF/HypC family 1 72 3.4E-26 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS12600 a0c83376aa92d64b37b2da8cadbe8dc6 95 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 8.7E-27 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS12600 a0c83376aa92d64b37b2da8cadbe8dc6 95 SUPERFAMILY SSF159127 1 83 1.44E-25 T 28-03-2018 DDI_RS12600 a0c83376aa92d64b37b2da8cadbe8dc6 95 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.5E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS12600 a0c83376aa92d64b37b2da8cadbe8dc6 95 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 3.5E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS12600 a0c83376aa92d64b37b2da8cadbe8dc6 95 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 3.5E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS12600 a0c83376aa92d64b37b2da8cadbe8dc6 95 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 3.5E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS00090 111a414c13322f8b7f739bc3bb89516a 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 7.1E-30 T 28-03-2018 IPR010398 Protein of unknown function DUF997 DDI_RS00090 111a414c13322f8b7f739bc3bb89516a 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 2.0E-26 T 28-03-2018 IPR010398 Protein of unknown function DUF997 DDI_RS01200 ec61683f0bbd523322c8e8acf060e512 194 SUPERFAMILY SSF101327 8 178 8.24E-51 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 DDI_RS01200 ec61683f0bbd523322c8e8acf060e512 194 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 192 35.606 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 DDI_RS01200 ec61683f0bbd523322c8e8acf060e512 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 173 3.6E-10 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 DDI_RS01200 ec61683f0bbd523322c8e8acf060e512 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 179 2.4E-38 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 DDI_RS05395 fba3988bf539ea0baa44a35a9b154dc2 178 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 174 2.2E-73 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DDI_RS05395 fba3988bf539ea0baa44a35a9b154dc2 178 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 2.0E-74 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DDI_RS05395 fba3988bf539ea0baa44a35a9b154dc2 178 Gene3D G3DSA:2.60.120.10 1 178 7.4E-77 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS05395 fba3988bf539ea0baa44a35a9b154dc2 178 SUPERFAMILY SSF51182 1 177 2.27E-76 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS05395 fba3988bf539ea0baa44a35a9b154dc2 178 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 175 4.1E-79 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DDI_RS03290 cc4cec9ecfadbd7bc30e3b3fee8fa75e 415 Gene3D G3DSA:2.40.160.60 23 413 1.9E-27 T 28-03-2018 DDI_RS03290 cc4cec9ecfadbd7bc30e3b3fee8fa75e 415 Pfam PF13729 F plasmid transfer operon, TraF, protein 50 332 4.0E-71 T 28-03-2018 IPR032811 Putative conjugal transfer protein TraF-related DDI_RS05860 55a31070bf560fb4a2ddd460bdea3131 162 SUPERFAMILY SSF143880 2 73 2.09E-7 T 28-03-2018 IPR018841 Protein of unknown function DUF2442 DDI_RS05860 55a31070bf560fb4a2ddd460bdea3131 162 Gene3D G3DSA:3.30.2020.10 1 74 1.2E-8 T 28-03-2018 IPR018841 Protein of unknown function DUF2442 DDI_RS07920 b383987bd1661e6cb4081befa2018409 272 SUPERFAMILY SSF53474 7 271 2.52E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS07920 b383987bd1661e6cb4081befa2018409 272 Gene3D G3DSA:3.40.50.1820 3 272 3.1E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS00780 c028ccbd30789a4619e6b978c7a798e7 161 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 154 1.3E-38 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 DDI_RS00780 c028ccbd30789a4619e6b978c7a798e7 161 SUPERFAMILY SSF102400 23 156 4.97E-44 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 DDI_RS00780 c028ccbd30789a4619e6b978c7a798e7 161 Gene3D G3DSA:3.40.50.10110 1 158 4.7E-52 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.752 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 Gene3D G3DSA:2.60.15.10 1 91 5.0E-29 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 Gene3D G3DSA:1.20.5.440 92 132 9.8E-13 T 28-03-2018 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 4.3E-12 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 SUPERFAMILY SSF46604 89 138 3.92E-15 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.3E-30 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 3.0E-40 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 SUPERFAMILY SSF51344 4 87 2.09E-25 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20020 bcdf732000889e1f671bf0d5508088bd 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 3.4E-47 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS11610 803c4c6349f731f1aae90c96e578d569 276 Pfam PF02146 Sir2 family 46 219 5.6E-51 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 DDI_RS11610 803c4c6349f731f1aae90c96e578d569 276 Gene3D G3DSA:3.40.50.1220 28 275 6.4E-56 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS11610 803c4c6349f731f1aae90c96e578d569 276 SUPERFAMILY SSF52467 39 268 1.5E-74 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain DDI_RS11610 803c4c6349f731f1aae90c96e578d569 276 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 265 57.905 T 28-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.5E-171 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 SUPERFAMILY SSF51621 171 344 2.37E-88 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 SUPERFAMILY SSF51621 4 79 2.37E-88 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 Gene3D G3DSA:3.20.20.60 171 327 1.5E-54 T 28-03-2018 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 4.3E-52 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.3E-52 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 4.3E-52 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 4.3E-52 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 4.3E-52 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.3E-52 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 4.3E-52 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 Gene3D G3DSA:3.20.20.60 1 78 1.2E-15 T 28-03-2018 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 2.9E-133 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 3.7E-29 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 Gene3D G3DSA:2.40.33.10 79 170 1.1E-21 T 28-03-2018 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 SUPERFAMILY SSF50800 74 168 3.14E-24 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 Gene3D G3DSA:3.40.1380.20 328 480 3.7E-42 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS08735 a0605bfda64d4d4fff786fab9dc4d08e 480 SUPERFAMILY SSF52935 329 479 3.53E-38 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDI_RS07775 de34147f965fcc0e93ba4b22b832652c 395 Pfam PF07690 Major Facilitator Superfamily 19 348 1.7E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS07775 de34147f965fcc0e93ba4b22b832652c 395 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 30.103 T 28-03-2018 IPR023495 Sugar efflux transporter, putative DDI_RS07775 de34147f965fcc0e93ba4b22b832652c 395 Gene3D G3DSA:1.20.1250.20 3 197 1.6E-24 T 28-03-2018 DDI_RS07775 de34147f965fcc0e93ba4b22b832652c 395 SUPERFAMILY SSF103473 7 386 1.23E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS07775 de34147f965fcc0e93ba4b22b832652c 395 Gene3D G3DSA:1.20.1250.20 198 394 6.9E-16 T 28-03-2018 DDI_RS04070 1b30e4e825595727c4c4cc20111f7fd8 1227 Gene3D G3DSA:3.40.50.300 1 211 4.4E-30 T 28-03-2018 DDI_RS04070 1b30e4e825595727c4c4cc20111f7fd8 1227 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1112 1181 7.5E-15 T 28-03-2018 DDI_RS04070 1b30e4e825595727c4c4cc20111f7fd8 1227 SUPERFAMILY SSF52540 1117 1202 6.8E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04070 1b30e4e825595727c4c4cc20111f7fd8 1227 SUPERFAMILY SSF52540 25 227 6.8E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04070 1b30e4e825595727c4c4cc20111f7fd8 1227 Gene3D G3DSA:3.40.50.300 869 1225 1.3E-18 T 28-03-2018 DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 SMART SM00382 211 373 4.0E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.4E-46 T 28-03-2018 DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 Gene3D G3DSA:3.40.50.300 190 435 1.4E-24 T 28-03-2018 DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 6.1E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 6.1E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 342 354 6.1E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 390 1.3E-90 T 28-03-2018 IPR000523 Magnesium chelatase ChlI domain DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 SUPERFAMILY SSF54211 8 169 4.93E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 494 7.9E-218 T 28-03-2018 IPR004482 Mg chelatase-related protein DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 Gene3D G3DSA:3.30.230.10 2 186 6.8E-40 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 SUPERFAMILY SSF52540 190 502 5.34E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18960 20208fa3497be6a98f8bce45659529e2 508 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 494 7.9E-31 T 28-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain DDI_RS00685 4c81f12db07009aae995e95bb99eedd4 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 28-03-2018 IPR019897 RidA, conserved site DDI_RS00685 4c81f12db07009aae995e95bb99eedd4 128 Gene3D G3DSA:3.30.1330.40 1 128 3.8E-45 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DDI_RS00685 4c81f12db07009aae995e95bb99eedd4 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 3.6E-44 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family DDI_RS00685 4c81f12db07009aae995e95bb99eedd4 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 9.9E-53 T 28-03-2018 IPR006056 RidA family DDI_RS00685 4c81f12db07009aae995e95bb99eedd4 128 SUPERFAMILY SSF55298 4 127 1.15E-44 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DDI_RS11020 57b278c84f4b103bfd0a3c8488cb6ff4 519 Gene3D G3DSA:3.40.630.10 43 243 1.4E-20 T 28-03-2018 DDI_RS11020 57b278c84f4b103bfd0a3c8488cb6ff4 519 SUPERFAMILY SSF53187 426 508 8.38E-29 T 28-03-2018 DDI_RS11020 57b278c84f4b103bfd0a3c8488cb6ff4 519 SUPERFAMILY SSF53187 51 240 8.38E-29 T 28-03-2018 DDI_RS11020 57b278c84f4b103bfd0a3c8488cb6ff4 519 Gene3D G3DSA:3.30.70.360 244 401 4.0E-34 T 28-03-2018 DDI_RS11020 57b278c84f4b103bfd0a3c8488cb6ff4 519 Pfam PF01546 Peptidase family M20/M25/M40 105 508 2.3E-12 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS11020 57b278c84f4b103bfd0a3c8488cb6ff4 519 Pfam PF07687 Peptidase dimerisation domain 238 389 3.6E-14 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS13255 68ee9e645dc7bd4d6e0e8e8c0f49338f 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 291 1.1E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13255 68ee9e645dc7bd4d6e0e8e8c0f49338f 298 Gene3D G3DSA:1.10.3720.10 18 285 1.1E-43 T 28-03-2018 DDI_RS13255 68ee9e645dc7bd4d6e0e8e8c0f49338f 298 SUPERFAMILY SSF161098 25 298 2.24E-67 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19520 07e64edef1852c847f67b67377e08fdd 339 Gene3D G3DSA:1.10.3720.10 3 325 2.1E-48 T 28-03-2018 DDI_RS19520 07e64edef1852c847f67b67377e08fdd 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 1.8E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19520 07e64edef1852c847f67b67377e08fdd 339 SUPERFAMILY SSF161098 89 160 1.64E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19520 07e64edef1852c847f67b67377e08fdd 339 SUPERFAMILY SSF161098 200 322 1.64E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 SMART SM00388 441 506 2.1E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 SUPERFAMILY SSF47226 799 879 1.28E-17 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 Gene3D G3DSA:1.20.120.160 762 881 9.4E-17 T 28-03-2018 DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 Pfam PF16359 RcsD-ABL domain 675 776 3.6E-35 T 28-03-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 SMART SM00387 553 666 8.6E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 Pfam PF01627 Hpt domain 801 876 3.2E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 1 881 24.844 T 28-03-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 SUPERFAMILY SSF55874 496 666 1.66E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 SUPERFAMILY SSF47384 427 504 7.06E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 Gene3D G3DSA:3.30.565.10 466 663 2.2E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04550 e0d9ef6951de75abaccb8ac36e05276f 889 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 664 1.8E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS04125 9d35af18a0f5b3b6dc5d51ef02ee0c89 384 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 7.3E-191 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDI_RS04125 9d35af18a0f5b3b6dc5d51ef02ee0c89 384 SUPERFAMILY SSF51713 2 364 2.35E-165 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDI_RS04125 9d35af18a0f5b3b6dc5d51ef02ee0c89 384 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.933 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDI_RS04125 9d35af18a0f5b3b6dc5d51ef02ee0c89 384 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 1.4E-180 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDI_RS04125 9d35af18a0f5b3b6dc5d51ef02ee0c89 384 Gene3D G3DSA:3.20.20.105 1 368 4.2E-159 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDI_RS04125 9d35af18a0f5b3b6dc5d51ef02ee0c89 384 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 4.4E-93 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDI_RS10300 244515d0782065735111bd6da83ecf38 260 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 99 114 3.9E-30 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DDI_RS10300 244515d0782065735111bd6da83ecf38 260 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 28 38 3.9E-30 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DDI_RS10300 244515d0782065735111bd6da83ecf38 260 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 79 92 3.9E-30 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DDI_RS10300 244515d0782065735111bd6da83ecf38 260 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 167 179 3.9E-30 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DDI_RS10300 244515d0782065735111bd6da83ecf38 260 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 119 132 3.9E-30 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DDI_RS10300 244515d0782065735111bd6da83ecf38 260 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 7 199 4.0E-67 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DDI_RS10300 244515d0782065735111bd6da83ecf38 260 Gene3D G3DSA:3.30.70.1530 26 92 3.2E-18 T 28-03-2018 DDI_RS10300 244515d0782065735111bd6da83ecf38 260 Pfam PF01514 Secretory protein of YscJ/FliF family 10 181 6.9E-26 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF DDI_RS20920 c353cbc65f57383c776e723042b14f90 336 SUPERFAMILY SSF161098 93 161 1.02E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20920 c353cbc65f57383c776e723042b14f90 336 SUPERFAMILY SSF161098 200 322 1.02E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20920 c353cbc65f57383c776e723042b14f90 336 Gene3D G3DSA:1.10.3720.10 4 325 1.4E-41 T 28-03-2018 DDI_RS20920 c353cbc65f57383c776e723042b14f90 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 336 2.4E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19560 7475a852cc15940190373619ae15d52a 137 Gene3D G3DSA:2.60.40.790 5 137 7.6E-19 T 28-03-2018 IPR008978 HSP20-like chaperone DDI_RS19560 7475a852cc15940190373619ae15d52a 137 SUPERFAMILY SSF49764 30 137 1.36E-19 T 28-03-2018 IPR008978 HSP20-like chaperone DDI_RS19560 7475a852cc15940190373619ae15d52a 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 3.6E-19 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain DDI_RS15910 069e8837c10015c9240093d6301b924f 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.4E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.4E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 Gene3D G3DSA:3.40.50.2300 176 313 3.5E-42 T 28-03-2018 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 SUPERFAMILY SSF53822 61 333 5.5E-74 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS15910 069e8837c10015c9240093d6301b924f 336 Gene3D G3DSA:3.40.50.2300 55 175 1.3E-34 T 28-03-2018 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 Gene3D G3DSA:1.10.260.40 2 54 2.9E-25 T 28-03-2018 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 SMART SM00354 1 71 4.1E-34 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 Pfam PF13377 Periplasmic binding protein-like domain 169 329 4.3E-30 T 28-03-2018 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS15910 069e8837c10015c9240093d6301b924f 336 SUPERFAMILY SSF47413 1 59 7.42E-20 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS09880 afd4d5c92d48cea9eb1fcb89f83a5cac 190 Pfam PF02659 Putative manganese efflux pump 31 182 7.7E-53 T 28-03-2018 IPR003810 Putative manganese efflux pump DDI_RS09880 afd4d5c92d48cea9eb1fcb89f83a5cac 190 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 185 25.685 T 28-03-2018 IPR022929 Putative manganese efflux pump MntP DDI_RS19545 6cc32e30d99b7df57b3fa3b59d774322 470 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 470 2.6E-145 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDI_RS19545 6cc32e30d99b7df57b3fa3b59d774322 470 PIRSF PIRSF002457 1 470 5.0E-141 T 28-03-2018 IPR030676 Citrate carrier CitT-related DDI_RS19545 6cc32e30d99b7df57b3fa3b59d774322 470 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 464 2.6E-116 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDI_RS05025 a6c489b2bdf34b9afdf9d883bf32a492 229 SUPERFAMILY SSF52172 7 177 5.69E-40 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS05025 a6c489b2bdf34b9afdf9d883bf32a492 229 SMART SM00862 151 227 7.7E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS05025 a6c489b2bdf34b9afdf9d883bf32a492 229 Gene3D G3DSA:3.40.50.2300 3 124 1.9E-34 T 28-03-2018 DDI_RS05025 a6c489b2bdf34b9afdf9d883bf32a492 229 Pfam PF00072 Response regulator receiver domain 8 117 4.7E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS05025 a6c489b2bdf34b9afdf9d883bf32a492 229 Gene3D G3DSA:1.10.10.10 125 229 9.7E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05025 a6c489b2bdf34b9afdf9d883bf32a492 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 7.2E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS05025 a6c489b2bdf34b9afdf9d883bf32a492 229 SMART SM00448 6 116 3.5E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS00235 7499465902eaa7187a9a31104d885249 241 Pfam PF00005 ABC transporter 20 166 9.9E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS00235 7499465902eaa7187a9a31104d885249 241 SMART SM00382 28 213 1.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS00235 7499465902eaa7187a9a31104d885249 241 SUPERFAMILY SSF52540 4 236 1.93E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00235 7499465902eaa7187a9a31104d885249 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS00235 7499465902eaa7187a9a31104d885249 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 2.3E-122 T 28-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 DDI_RS00235 7499465902eaa7187a9a31104d885249 241 Gene3D G3DSA:3.40.50.300 1 236 4.5E-63 T 28-03-2018 DDI_RS00235 7499465902eaa7187a9a31104d885249 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.9E-5 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DDI_RS00795 1c401cc8cadd3e32d6f5785aadf06b62 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 7.4E-74 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DDI_RS00795 1c401cc8cadd3e32d6f5785aadf06b62 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.3E-137 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 DDI_RS20750 62e28fe94e9cddd87ca2391e88da29ac 811 Pfam PF02687 FtsX-like permease family 717 804 7.2E-9 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDI_RS20750 62e28fe94e9cddd87ca2391e88da29ac 811 Pfam PF02687 FtsX-like permease family 303 397 1.6E-8 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDI_RS20750 62e28fe94e9cddd87ca2391e88da29ac 811 Pfam PF12704 MacB-like periplasmic core domain 535 641 2.6E-8 T 28-03-2018 IPR025857 MacB-like periplasmic core domain DDI_RS20750 62e28fe94e9cddd87ca2391e88da29ac 811 Pfam PF12704 MacB-like periplasmic core domain 21 235 7.7E-12 T 28-03-2018 IPR025857 MacB-like periplasmic core domain DDI_RS12475 fe4f5a02574afdbff288b335039b3cfb 276 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 101 134 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS12475 fe4f5a02574afdbff288b335039b3cfb 276 Gene3D G3DSA:3.40.1010.10 20 145 6.5E-35 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS12475 fe4f5a02574afdbff288b335039b3cfb 276 SUPERFAMILY SSF53790 20 256 3.14E-78 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS12475 fe4f5a02574afdbff288b335039b3cfb 276 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 21 255 3.0E-91 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS12475 fe4f5a02574afdbff288b335039b3cfb 276 Gene3D G3DSA:3.30.950.10 146 268 1.8E-38 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS12475 fe4f5a02574afdbff288b335039b3cfb 276 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 23 232 3.5E-50 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS12475 fe4f5a02574afdbff288b335039b3cfb 276 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 26 40 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 DDI_RS18485 bab2420676fc2ec26917a2b446cf3fdf 239 Pfam PF00156 Phosphoribosyl transferase domain 143 236 4.6E-7 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDI_RS18485 bab2420676fc2ec26917a2b446cf3fdf 239 Gene3D G3DSA:3.40.50.2020 61 239 2.2E-30 T 28-03-2018 DDI_RS18485 bab2420676fc2ec26917a2b446cf3fdf 239 SUPERFAMILY SSF53271 49 237 5.38E-33 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS02075 0f4c9132294c2bc56a18397c90b86d9d 314 SUPERFAMILY SSF103481 41 143 1.83E-13 T 28-03-2018 DDI_RS02075 0f4c9132294c2bc56a18397c90b86d9d 314 Pfam PF00892 EamA-like transporter family 159 291 4.8E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS02075 0f4c9132294c2bc56a18397c90b86d9d 314 Pfam PF00892 EamA-like transporter family 7 142 9.8E-24 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 8.3E-10 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 8.3E-10 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 73 85 8.3E-10 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 53 71 8.3E-10 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 PRINTS PR01182 Ornithine decarboxylase signature 94 118 1.2E-6 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 PRINTS PR01182 Ornithine decarboxylase signature 360 373 1.2E-6 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 PRINTS PR01182 Ornithine decarboxylase signature 51 78 1.2E-6 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 SUPERFAMILY SSF51419 30 283 1.19E-57 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 280 2.9E-30 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 Gene3D G3DSA:2.40.37.10 266 417 3.7E-33 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 Gene3D G3DSA:3.20.20.10 32 265 1.4E-47 T 28-03-2018 IPR029066 PLP-binding barrel DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 SUPERFAMILY SSF50621 261 399 3.77E-35 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 97 373 3.9E-14 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DDI_RS06125 c24eb5b7fff26a6d68421df5874197c6 419 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 223 239 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DDI_RS18700 3d4e03d233838fe04bc87a0d758886b3 60 Pfam PF13627 Prokaryotic lipoprotein-attachment site 15 35 1.9E-8 T 28-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site DDI_RS15010 245f84c79259dd690b5e8db5bb589fd6 188 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 38 172 4.4E-24 T 28-03-2018 IPR013382 CRISPR-associated protein Cse2 DDI_RS15010 245f84c79259dd690b5e8db5bb589fd6 188 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 32 174 8.8E-25 T 28-03-2018 IPR013382 CRISPR-associated protein Cse2 DDI_RS15115 e60e728bfde612c8d49ce7fc909b8f42 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 3.2E-112 T 28-03-2018 IPR026869 Putative glutamine amidotransferase type 2 DDI_RS15115 e60e728bfde612c8d49ce7fc909b8f42 255 Gene3D G3DSA:3.60.20.10 1 255 1.2E-44 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS15115 e60e728bfde612c8d49ce7fc909b8f42 255 SUPERFAMILY SSF56235 2 252 9.15E-49 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS07660 2206be676975b3a3ddb2ce31a76d4be0 95 Pfam PF01386 Ribosomal L25p family 4 92 1.8E-22 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DDI_RS07660 2206be676975b3a3ddb2ce31a76d4be0 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 95 26.81 T 28-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DDI_RS07660 2206be676975b3a3ddb2ce31a76d4be0 95 SUPERFAMILY SSF50715 1 95 9.59E-27 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDI_RS07660 2206be676975b3a3ddb2ce31a76d4be0 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 95 1.0E-30 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DDI_RS07660 2206be676975b3a3ddb2ce31a76d4be0 95 Gene3D G3DSA:2.40.240.10 1 95 8.2E-27 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDI_RS20620 321f7cec41df3480df76cc6eafff23f7 284 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 21 283 33.284 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DDI_RS20620 321f7cec41df3480df76cc6eafff23f7 284 Gene3D G3DSA:3.10.20.10 49 105 1.8E-21 T 28-03-2018 DDI_RS20620 321f7cec41df3480df76cc6eafff23f7 284 SUPERFAMILY SSF53927 31 282 6.62E-78 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDI_RS20620 321f7cec41df3480df76cc6eafff23f7 284 PIRSF PIRSF015626 11 284 4.1E-80 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DDI_RS20620 321f7cec41df3480df76cc6eafff23f7 284 Gene3D G3DSA:3.40.140.10 151 284 6.2E-43 T 28-03-2018 DDI_RS20620 321f7cec41df3480df76cc6eafff23f7 284 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 43 283 2.2E-89 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DDI_RS20620 321f7cec41df3480df76cc6eafff23f7 284 Pfam PF02634 FdhD/NarQ family 47 282 2.1E-70 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DDI_RS09140 bb995ef1bf6c13d631404645047a2fa6 290 Pfam PF02811 PHP domain 15 169 2.2E-10 T 28-03-2018 IPR004013 PHP domain GO:0003824 DDI_RS09140 bb995ef1bf6c13d631404645047a2fa6 290 Gene3D G3DSA:3.20.20.140 12 267 9.3E-41 T 28-03-2018 DDI_RS09140 bb995ef1bf6c13d631404645047a2fa6 290 SUPERFAMILY SSF89550 176 285 4.84E-51 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DDI_RS09140 bb995ef1bf6c13d631404645047a2fa6 290 SUPERFAMILY SSF89550 13 94 4.84E-51 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DDI_RS09140 bb995ef1bf6c13d631404645047a2fa6 290 SMART SM00481 14 81 4.0E-20 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DDI_RS15680 21164ea8b51975672ae3c1542ecd5d93 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site DDI_RS15680 21164ea8b51975672ae3c1542ecd5d93 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DDI_RS15680 21164ea8b51975672ae3c1542ecd5d93 246 Pfam PF00459 Inositol monophosphatase family 3 233 1.4E-47 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS15680 21164ea8b51975672ae3c1542ecd5d93 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 2.7E-102 T 28-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 DDI_RS15680 21164ea8b51975672ae3c1542ecd5d93 246 SUPERFAMILY SSF56655 1 242 2.88E-74 T 28-03-2018 DDI_RS15680 21164ea8b51975672ae3c1542ecd5d93 246 Gene3D G3DSA:3.30.540.10 1 149 3.3E-42 T 28-03-2018 DDI_RS15680 21164ea8b51975672ae3c1542ecd5d93 246 Gene3D G3DSA:3.40.190.80 150 245 1.6E-32 T 28-03-2018 DDI_RS03780 732540496360db126bb04ef84d1c2795 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.762 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS03780 732540496360db126bb04ef84d1c2795 151 Gene3D G3DSA:3.10.129.10 1 149 3.1E-54 T 28-03-2018 DDI_RS03780 732540496360db126bb04ef84d1c2795 151 SUPERFAMILY SSF54637 7 147 5.61E-50 T 28-03-2018 IPR029069 HotDog domain DDI_RS03780 732540496360db126bb04ef84d1c2795 151 Pfam PF07977 FabA-like domain 17 142 1.8E-40 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS03780 732540496360db126bb04ef84d1c2795 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 1.4E-61 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 Gene3D G3DSA:3.40.50.850 1 210 3.1E-51 T 28-03-2018 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 PRINTS PR01398 Isochorismatase signature 168 186 1.0E-48 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 PRINTS PR01398 Isochorismatase signature 186 203 1.0E-48 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 PRINTS PR01398 Isochorismatase signature 80 99 1.0E-48 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 PRINTS PR01398 Isochorismatase signature 112 134 1.0E-48 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 PRINTS PR01398 Isochorismatase signature 2 14 1.0E-48 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 PRINTS PR01398 Isochorismatase signature 63 80 1.0E-48 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 Pfam PF00550 Phosphopantetheine attachment site 221 278 3.0E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 Gene3D G3DSA:1.10.1200.10 211 287 7.7E-11 T 28-03-2018 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 Pfam PF00857 Isochorismatase family 32 205 5.9E-39 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 SUPERFAMILY SSF52499 1 211 2.62E-66 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 SUPERFAMILY SSF47336 214 283 2.49E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS13085 21bb99fdb1e01046106d513c6c6297cb 291 PIRSF PIRSF001111 1 291 6.1E-131 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 DDI_RS01450 1488357a1dae76eb86484a37fba72800 428 Pfam PF10082 Putative beta-barrel porin 2 233 399 4.3E-10 T 28-03-2018 IPR018759 Putative beta-barrel porin 2 DDI_RS01450 1488357a1dae76eb86484a37fba72800 428 Gene3D G3DSA:2.40.160.40 31 410 1.6E-5 T 28-03-2018 DDI_RS20810 c36c0ac81a0a34c3b2da9965d16d56dd 507 SUPERFAMILY SSF56801 4 499 3.27E-99 T 28-03-2018 DDI_RS20810 c36c0ac81a0a34c3b2da9965d16d56dd 507 Gene3D G3DSA:3.40.50.980 2 148 7.9E-21 T 28-03-2018 DDI_RS20810 c36c0ac81a0a34c3b2da9965d16d56dd 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 144 155 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS20810 c36c0ac81a0a34c3b2da9965d16d56dd 507 Gene3D G3DSA:3.40.50.980 149 304 6.7E-30 T 28-03-2018 DDI_RS20810 c36c0ac81a0a34c3b2da9965d16d56dd 507 Pfam PF00501 AMP-binding enzyme 10 404 2.2E-60 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS20810 c36c0ac81a0a34c3b2da9965d16d56dd 507 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 488 2.1E-6 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS20810 c36c0ac81a0a34c3b2da9965d16d56dd 507 Gene3D G3DSA:2.30.38.10 321 397 1.2E-16 T 28-03-2018 DDI_RS20810 c36c0ac81a0a34c3b2da9965d16d56dd 507 Gene3D G3DSA:3.30.300.30 399 504 3.9E-24 T 28-03-2018 DDI_RS18230 316913e91b123b587836d39ad8405d53 64 Gene3D G3DSA:2.20.25.10 9 48 4.4E-4 T 28-03-2018 DDI_RS18230 316913e91b123b587836d39ad8405d53 64 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 45 7.9E-15 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 DDI_RS18230 316913e91b123b587836d39ad8405d53 64 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 49 5.0E-20 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 DDI_RS07120 1ce9e742b8776d8cef9b2e2ed45c9eb2 231 Pfam PF04172 LrgB-like family 11 222 8.6E-77 T 28-03-2018 IPR007300 CidB/LrgB family DDI_RS07120 1ce9e742b8776d8cef9b2e2ed45c9eb2 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 8.6E-96 T 28-03-2018 IPR005261 Conserved hypothetical protein CHP00659 DDI_RS10495 23cc8c7963d2dc6da9093689de0ddbd6 76 Gene3D G3DSA:3.30.429.10 2 66 2.0E-11 T 28-03-2018 DDI_RS10495 23cc8c7963d2dc6da9093689de0ddbd6 76 PIRSF PIRSF037799 1 76 4.2E-26 T 28-03-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 DDI_RS10495 23cc8c7963d2dc6da9093689de0ddbd6 76 SUPERFAMILY SSF55331 2 75 8.24E-13 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily DDI_RS10495 23cc8c7963d2dc6da9093689de0ddbd6 76 Pfam PF01361 Tautomerase enzyme 2 52 1.0E-8 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 8 261 4.6E-85 T 28-03-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 Pfam PF00459 Inositol monophosphatase family 9 255 2.7E-43 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 1.4E-23 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 1.4E-23 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 1.4E-23 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 1.4E-23 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 1.4E-23 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 Gene3D G3DSA:3.40.190.80 158 263 1.7E-19 T 28-03-2018 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 Gene3D G3DSA:3.30.540.10 5 157 2.8E-37 T 28-03-2018 DDI_RS10450 bb7bcedf46f89498a6cfdf1ca4d354b6 263 SUPERFAMILY SSF56655 7 262 7.33E-64 T 28-03-2018 DDI_RS08235 a078668c9b7820786372f080bcbae2ec 356 SUPERFAMILY SSF53383 5 350 7.58E-81 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS08235 a078668c9b7820786372f080bcbae2ec 356 Pfam PF00155 Aminotransferase class I and II 42 348 4.0E-57 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS08235 a078668c9b7820786372f080bcbae2ec 356 Gene3D G3DSA:3.90.1150.10 274 351 9.9E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS08235 a078668c9b7820786372f080bcbae2ec 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 349 3.2E-118 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DDI_RS08235 a078668c9b7820786372f080bcbae2ec 356 Gene3D G3DSA:3.40.640.10 33 273 5.1E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS08235 a078668c9b7820786372f080bcbae2ec 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 DDI_RS08235 a078668c9b7820786372f080bcbae2ec 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 54.326 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DDI_RS08430 93b1e7aaabdc7d7d8b1c98bdddb48de4 162 Gene3D G3DSA:3.90.79.10 23 162 3.0E-21 T 28-03-2018 DDI_RS08430 93b1e7aaabdc7d7d8b1c98bdddb48de4 162 Pfam PF00293 NUDIX domain 30 132 2.1E-14 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS08430 93b1e7aaabdc7d7d8b1c98bdddb48de4 162 SUPERFAMILY SSF55811 32 142 2.03E-21 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS17460 ee18bc7b11e87a6502d45ddcd399d1c8 272 Pfam PF00005 ABC transporter 39 197 8.3E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS17460 ee18bc7b11e87a6502d45ddcd399d1c8 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS17460 ee18bc7b11e87a6502d45ddcd399d1c8 272 PIRSF PIRSF039085 20 272 9.5E-105 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS17460 ee18bc7b11e87a6502d45ddcd399d1c8 272 SUPERFAMILY SSF52540 24 267 2.1E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17460 ee18bc7b11e87a6502d45ddcd399d1c8 272 SMART SM00382 48 245 6.2E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS17460 ee18bc7b11e87a6502d45ddcd399d1c8 272 Gene3D G3DSA:3.40.50.300 21 271 2.3E-77 T 28-03-2018 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 SUPERFAMILY SSF51905 3 250 3.15E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 SUPERFAMILY SSF51905 361 420 3.15E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 SUPERFAMILY SSF46977 444 590 2.35E-47 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 Gene3D G3DSA:3.50.50.60 2 447 3.0E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 5.6E-39 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 Pfam PF00890 FAD binding domain 7 397 1.1E-114 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 28-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 SUPERFAMILY SSF56425 227 358 7.63E-43 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 Gene3D G3DSA:4.10.80.40 550 581 1.5E-12 T 28-03-2018 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.4E-5 T 28-03-2018 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-5 T 28-03-2018 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 Gene3D G3DSA:1.20.58.100 448 549 3.8E-26 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 2.6E-246 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.5E-10 T 28-03-2018 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-10 T 28-03-2018 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 PIRSF PIRSF000171 1 572 4.9E-44 T 28-03-2018 DDI_RS17770 ee341617037de4d6d5b53b0d8b1bfc7c 598 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.5E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.5E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.5E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 SMART SM00448 6 119 1.6E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 SMART SM00421 152 209 3.3E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 Gene3D G3DSA:3.40.50.2300 5 137 2.5E-36 T 28-03-2018 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 SUPERFAMILY SSF52172 6 134 8.11E-36 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 SUPERFAMILY SSF46894 143 213 4.08E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 2.4E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 Gene3D G3DSA:1.10.10.10 138 214 7.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10595 8915423c4b013aafc0c5981c86a4efba 215 Pfam PF00072 Response regulator receiver domain 8 119 1.4E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 Gene3D G3DSA:3.30.70.20 147 180 1.4E-5 T 28-03-2018 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 Pfam PF04060 Putative Fe-S cluster 44 76 4.5E-14 T 28-03-2018 IPR007202 4Fe-4S domain GO:0051536 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 PIRSF PIRSF005784 3 190 1.5E-82 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 184 42.733 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 Pfam PF14697 4Fe-4S dicluster domain 109 162 2.3E-16 T 28-03-2018 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 189 7.1E-84 T 28-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 SUPERFAMILY SSF54862 38 175 2.55E-28 T 28-03-2018 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 Gene3D G3DSA:3.30.70.20 23 125 6.0E-12 T 28-03-2018 DDI_RS09220 75b501d186c29df051976a0f3fa7f744 196 Gene3D G3DSA:3.30.70.20 126 146 2.6E-10 T 28-03-2018 DDI_RS17115 40edeee3adb02ab83385c6b4a635f585 179 Pfam PF01931 Protein of unknown function DUF84 8 165 5.1E-51 T 28-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 DDI_RS17115 40edeee3adb02ab83385c6b4a635f585 179 SUPERFAMILY SSF52972 1 168 7.41E-56 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDI_RS17115 40edeee3adb02ab83385c6b4a635f585 179 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.852 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase DDI_RS17115 40edeee3adb02ab83385c6b4a635f585 179 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 169 2.0E-51 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase DDI_RS17115 40edeee3adb02ab83385c6b4a635f585 179 Gene3D G3DSA:3.90.950.10 1 170 1.1E-55 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDI_RS19855 fa35bfbadeb3d52af70ce29c6393d62b 328 Pfam PF01636 Phosphotransferase enzyme family 33 259 3.0E-40 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase DDI_RS19855 fa35bfbadeb3d52af70ce29c6393d62b 328 Gene3D G3DSA:3.30.200.20 5 107 2.4E-19 T 28-03-2018 DDI_RS19855 fa35bfbadeb3d52af70ce29c6393d62b 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 44.781 T 28-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 DDI_RS19855 fa35bfbadeb3d52af70ce29c6393d62b 328 Gene3D G3DSA:3.90.1200.10 110 322 2.5E-19 T 28-03-2018 DDI_RS19855 fa35bfbadeb3d52af70ce29c6393d62b 328 SUPERFAMILY SSF56112 6 326 8.46E-84 T 28-03-2018 IPR011009 Protein kinase-like domain DDI_RS18595 f019c092df584d4af57a1d42309bad1e 232 Gene3D G3DSA:2.60.120.10 11 131 2.0E-49 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS18595 f019c092df584d4af57a1d42309bad1e 232 PIRSF PIRSF006232 1 231 1.2E-57 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DDI_RS18595 f019c092df584d4af57a1d42309bad1e 232 Gene3D G3DSA:2.60.120.10 132 232 2.1E-25 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS18595 f019c092df584d4af57a1d42309bad1e 232 SUPERFAMILY SSF51182 1 230 4.19E-82 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS18595 f019c092df584d4af57a1d42309bad1e 232 Pfam PF02678 Pirin 8 119 4.8E-38 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DDI_RS12595 f29a14e3402d45e6abe463da9aba09ca 371 Pfam PF01924 Hydrogenase formation hypA family 12 367 2.6E-156 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DDI_RS12595 f29a14e3402d45e6abe463da9aba09ca 371 PIRSF PIRSF005622 1 371 1.1E-159 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DDI_RS12595 f29a14e3402d45e6abe463da9aba09ca 371 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 369 5.8E-159 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 Pfam PF01726 LexA DNA binding domain 1 65 2.6E-29 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 SUPERFAMILY SSF46785 3 69 1.43E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 Gene3D G3DSA:2.10.109.10 81 200 9.0E-25 T 28-03-2018 DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 Hamap MF_00015 LexA repressor [lexA]. 3 200 31.988 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 112 122 1.1E-13 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 134 1.1E-13 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 151 163 1.1E-13 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 SUPERFAMILY SSF51306 77 199 1.34E-36 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 TIGRFAM TIGR00498 lexA: repressor LexA 1 200 4.3E-83 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 Gene3D G3DSA:1.10.10.10 1 70 1.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01585 314a4d6cf4d50e51eca3ef3a579c3dc0 203 Pfam PF00717 Peptidase S24-like 115 180 1.2E-14 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 4.0E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 SUPERFAMILY SSF54909 66 149 2.41E-15 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 Gene3D G3DSA:3.30.70.920 57 150 4.6E-19 T 28-03-2018 DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 Gene3D G3DSA:1.10.10.10 4 55 2.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 3.8E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 SUPERFAMILY SSF46785 2 63 1.79E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 5.5E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 5.5E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 5.5E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDI_RS16275 8fc98c3720bcb15eb2a89025d87c7f35 158 SMART SM00344 4 113 6.0E-27 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DDI_RS06085 635abb142c564619ec6b7467c1a30306 213 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 8 186 2.9E-39 T 28-03-2018 IPR013343 CRISPR-associated protein Cas4 DDI_RS06085 635abb142c564619ec6b7467c1a30306 213 Pfam PF01930 Domain of unknown function DUF83 9 185 2.9E-34 T 28-03-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 Pfam PF03466 LysR substrate binding domain 88 292 2.7E-42 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 SUPERFAMILY SSF46785 2 110 1.52E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 Gene3D G3DSA:3.40.190.10 88 181 6.0E-20 T 28-03-2018 DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 Gene3D G3DSA:3.40.190.10 182 265 7.0E-18 T 28-03-2018 DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 SUPERFAMILY SSF53850 89 294 9.0E-36 T 28-03-2018 DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07400 d4d4948dfc471dc66ff5dc4d2fee5c79 304 Gene3D G3DSA:1.10.10.10 1 82 1.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08675 a3cba56273d476026d7bf821d75b2123 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.829 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS08675 a3cba56273d476026d7bf821d75b2123 247 Pfam PF01709 Transcriptional regulator 5 236 5.7E-93 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS08675 a3cba56273d476026d7bf821d75b2123 247 Gene3D G3DSA:1.10.10.200 1 78 2.9E-30 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like DDI_RS08675 a3cba56273d476026d7bf821d75b2123 247 Gene3D G3DSA:3.30.70.980 83 174 6.4E-32 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS08675 a3cba56273d476026d7bf821d75b2123 247 SUPERFAMILY SSF75625 3 244 4.19E-95 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS08675 a3cba56273d476026d7bf821d75b2123 247 Gene3D G3DSA:3.30.70.980 175 247 2.2E-11 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS08675 a3cba56273d476026d7bf821d75b2123 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 4.2E-104 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDI_RS21050 32d03747f62b5bf1d16bb0c60f79b2d2 110 Pfam PF02656 Domain of unknown function (DUF202) 11 76 1.0E-12 T 28-03-2018 IPR003807 Domain of unknown function DUF202 DDI_RS21050 32d03747f62b5bf1d16bb0c60f79b2d2 110 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 11 37 9.0E-5 T 28-03-2018 IPR020264 Uncharacterised protein family YidG DDI_RS20410 441e710ea8b0c80bd13de60f97864939 355 Gene3D G3DSA:3.40.50.1110 142 353 2.0E-18 T 28-03-2018 DDI_RS20410 441e710ea8b0c80bd13de60f97864939 355 Pfam PF04311 Protein of unknown function (DUF459) 104 347 3.4E-18 T 28-03-2018 IPR007407 Protein of unknown function DUF459 DDI_RS20410 441e710ea8b0c80bd13de60f97864939 355 SUPERFAMILY SSF52266 149 351 2.5E-18 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS01885 8af0f919fd3845a8e1822cc2d2728aa5 220 Gene3D G3DSA:1.25.40.10 76 219 3.1E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS01885 8af0f919fd3845a8e1822cc2d2728aa5 220 Pfam PF05944 Phage small terminase subunit 35 164 1.2E-48 T 28-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 DDI_RS20485 21c10a0a621f0fe7400105c4447ad1bf 349 Gene3D G3DSA:3.20.20.30 10 345 6.1E-67 T 28-03-2018 DDI_RS20485 21c10a0a621f0fe7400105c4447ad1bf 349 Pfam PF00296 Luciferase-like monooxygenase 15 289 1.2E-39 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS20485 21c10a0a621f0fe7400105c4447ad1bf 349 TIGRFAM TIGR04027 LLM_KPN_01858: putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family 4 329 3.1E-170 T 28-03-2018 IPR024003 Putative luciferase-like monooxygenase, KPN01858 DDI_RS20485 21c10a0a621f0fe7400105c4447ad1bf 349 SUPERFAMILY SSF51679 7 330 4.32E-65 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS04630 66f3d9f4a37a744b40de8a674d0b6ccf 228 SUPERFAMILY SSF52540 6 227 2.66E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04630 66f3d9f4a37a744b40de8a674d0b6ccf 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS04630 66f3d9f4a37a744b40de8a674d0b6ccf 228 Gene3D G3DSA:3.40.50.300 2 228 8.6E-60 T 28-03-2018 DDI_RS04630 66f3d9f4a37a744b40de8a674d0b6ccf 228 Pfam PF00005 ABC transporter 27 174 7.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS04630 66f3d9f4a37a744b40de8a674d0b6ccf 228 SMART SM00382 35 223 4.1E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09180 03b88fdebec1d3ca083306fed152f4d0 89 Pfam PF10692 Protein of unknown function (DUF2498) 10 87 4.6E-42 T 28-03-2018 IPR019633 Protein of unknown function DUF2498 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 PIRSF PIRSF000723 7 308 1.7E-111 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 Pfam PF00696 Amino acid kinase family 10 282 6.2E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 PRINTS PR01469 Bacterial carbamate kinase signature 263 278 8.0E-62 T 28-03-2018 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 PRINTS PR01469 Bacterial carbamate kinase signature 181 199 8.0E-62 T 28-03-2018 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 PRINTS PR01469 Bacterial carbamate kinase signature 49 68 8.0E-62 T 28-03-2018 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 PRINTS PR01469 Bacterial carbamate kinase signature 110 129 8.0E-62 T 28-03-2018 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 PRINTS PR01469 Bacterial carbamate kinase signature 79 97 8.0E-62 T 28-03-2018 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 PRINTS PR01469 Bacterial carbamate kinase signature 212 227 8.0E-62 T 28-03-2018 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 PRINTS PR01469 Bacterial carbamate kinase signature 158 177 8.0E-62 T 28-03-2018 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 Gene3D G3DSA:3.40.1160.10 7 307 8.0E-52 T 28-03-2018 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 TIGRFAM TIGR00746 arcC: carbamate kinase 10 306 2.1E-114 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 DDI_RS00765 c564e4ce32a5b330f86fc310b3011bc3 309 SUPERFAMILY SSF53633 10 306 7.59E-74 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS01080 fa99d9d0982fde8cd61c305d42926226 338 PIRSF PIRSF006278 1 338 2.9E-123 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase DDI_RS01080 fa99d9d0982fde8cd61c305d42926226 338 SUPERFAMILY SSF53686 4 335 1.92E-103 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS01080 fa99d9d0982fde8cd61c305d42926226 338 TIGRFAM TIGR01274 ACC_deam: 1-aminocyclopropane-1-carboxylate deaminase 2 337 4.8E-197 T 28-03-2018 IPR005965 1-aminocyclopropane-1-carboxylate deaminase GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 DDI_RS01080 fa99d9d0982fde8cd61c305d42926226 338 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 321 5.3E-43 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS01080 fa99d9d0982fde8cd61c305d42926226 338 Hamap MF_00807 1-aminocyclopropane-1-carboxylate deaminase [acdS]. 2 338 74.379 T 28-03-2018 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 DDI_RS01080 fa99d9d0982fde8cd61c305d42926226 338 Gene3D G3DSA:3.40.50.1100 153 338 1.4E-28 T 28-03-2018 DDI_RS01080 fa99d9d0982fde8cd61c305d42926226 338 Gene3D G3DSA:3.40.50.1100 50 152 7.5E-31 T 28-03-2018 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 1.3E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 1.3E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 1.3E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 1.3E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 Pfam PF00425 chorismate binding enzyme 242 502 1.4E-84 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 PIRSF PIRSF001373 1 520 1.6E-250 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 SUPERFAMILY SSF56322 10 514 1.03E-163 T 28-03-2018 IPR005801 ADC synthase GO:0009058 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 Gene3D G3DSA:3.60.120.10 1 520 7.7E-163 T 28-03-2018 IPR005801 ADC synthase GO:0009058 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 193 8.3E-17 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS09135 4dfeee8091410e7807d8a4df4ad49923 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 3.1E-242 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDI_RS15075 67e4a25d4d1f4286d26fb05c88bd2b37 422 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 404 5.3E-35 T 28-03-2018 IPR000160 GGDEF domain DDI_RS15075 67e4a25d4d1f4286d26fb05c88bd2b37 422 SUPERFAMILY SSF55073 254 404 1.8E-39 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS15075 67e4a25d4d1f4286d26fb05c88bd2b37 422 SMART SM00267 238 409 1.4E-47 T 28-03-2018 IPR000160 GGDEF domain DDI_RS15075 67e4a25d4d1f4286d26fb05c88bd2b37 422 Gene3D G3DSA:3.30.70.270 233 407 3.8E-48 T 28-03-2018 DDI_RS15075 67e4a25d4d1f4286d26fb05c88bd2b37 422 Pfam PF17152 Periplasmic sensor domain 45 145 5.7E-29 T 28-03-2018 IPR033417 Periplasmic sensor domain CHASE8 DDI_RS15075 67e4a25d4d1f4286d26fb05c88bd2b37 422 Pfam PF00990 Diguanylate cyclase, GGDEF domain 250 404 1.3E-41 T 28-03-2018 IPR000160 GGDEF domain DDI_RS09400 483dd168223eceeaaef70be07465efae 479 Pfam PF08548 Peptidase M10 serralysin C terminal 260 478 1.5E-82 T 28-03-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 Gene3D G3DSA:2.150.10.10 255 479 6.2E-57 T 28-03-2018 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 344 361 0.047 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 363 379 2.1E-5 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 380 395 2.6 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 PRINTS PR00313 NodO calcium binding signature 381 390 1.4E-13 T 28-03-2018 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 PRINTS PR00313 NodO calcium binding signature 342 353 1.4E-13 T 28-03-2018 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 PRINTS PR00313 NodO calcium binding signature 372 380 1.4E-13 T 28-03-2018 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 PRINTS PR00313 NodO calcium binding signature 363 371 1.4E-13 T 28-03-2018 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 SMART SM00235 74 244 3.8E-30 T 28-03-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 368 386 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site DDI_RS09400 483dd168223eceeaaef70be07465efae 479 SUPERFAMILY SSF51120 259 477 4.58E-53 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDI_RS09400 483dd168223eceeaaef70be07465efae 479 PIRSF PIRSF001205 4 479 2.0E-228 T 28-03-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 Gene3D G3DSA:3.40.390.10 36 254 2.6E-39 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 Pfam PF00413 Matrixin 101 199 7.6E-9 T 28-03-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 DDI_RS09400 483dd168223eceeaaef70be07465efae 479 SUPERFAMILY SSF55486 23 258 2.32E-80 T 28-03-2018 DDI_RS10135 bc5c1d2aaa1fdcb9b650ba064d7de9dc 117 Pfam PF15586 Immunity protein 8 5 115 3.1E-39 T 28-03-2018 IPR028964 Immunity protein 8 DDI_RS04590 25d72ded5cede67f38787346a4e44d34 181 SUPERFAMILY SSF56925 46 181 3.92E-8 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS04590 25d72ded5cede67f38787346a4e44d34 181 Pfam PF07437 YfaZ precursor 1 181 4.3E-49 T 28-03-2018 IPR009998 YfaZ DDI_RS04590 25d72ded5cede67f38787346a4e44d34 181 Gene3D G3DSA:2.40.160.20 129 181 5.2E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS04590 25d72ded5cede67f38787346a4e44d34 181 Gene3D G3DSA:2.40.160.20 14 128 0.0018 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS01295 acfb8d1fd608b6c8203a79d05c6dc2e7 329 Gene3D G3DSA:3.40.50.1980 170 329 5.5E-35 T 28-03-2018 DDI_RS01295 acfb8d1fd608b6c8203a79d05c6dc2e7 329 Pfam PF01497 Periplasmic binding protein 62 297 8.0E-22 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 DDI_RS01295 acfb8d1fd608b6c8203a79d05c6dc2e7 329 Gene3D G3DSA:3.40.50.1980 32 169 3.9E-22 T 28-03-2018 DDI_RS01295 acfb8d1fd608b6c8203a79d05c6dc2e7 329 SUPERFAMILY SSF53807 50 325 3.57E-46 T 28-03-2018 DDI_RS08825 6dfc364ea5f122455bce0ae07890eb50 334 Gene3D G3DSA:1.10.150.20 221 289 0.0043 T 28-03-2018 DDI_RS08825 6dfc364ea5f122455bce0ae07890eb50 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 8.1E-21 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DDI_RS08825 6dfc364ea5f122455bce0ae07890eb50 334 Gene3D G3DSA:1.10.340.30 107 220 7.1E-6 T 28-03-2018 DDI_RS08825 6dfc364ea5f122455bce0ae07890eb50 334 Pfam PF01548 Transposase 7 147 8.1E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DDI_RS12900 49225d5b4c4b07d787215301bc2cbcce 406 SUPERFAMILY SSF53901 1 253 8.35E-64 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12900 49225d5b4c4b07d787215301bc2cbcce 406 SUPERFAMILY SSF53901 215 404 2.67E-63 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12900 49225d5b4c4b07d787215301bc2cbcce 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 8.0E-41 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDI_RS12900 49225d5b4c4b07d787215301bc2cbcce 406 Gene3D G3DSA:3.40.47.10 4 259 5.2E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12900 49225d5b4c4b07d787215301bc2cbcce 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 1.3E-30 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDI_RS12900 49225d5b4c4b07d787215301bc2cbcce 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site DDI_RS12900 49225d5b4c4b07d787215301bc2cbcce 406 Gene3D G3DSA:3.40.47.10 260 404 1.1E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12900 49225d5b4c4b07d787215301bc2cbcce 406 SMART SM00825 Beta-ketoacyl synthase 4 406 5.5E-13 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDI_RS07340 e2e778742d7f2d09d4649cc35b494415 425 Pfam PF01569 PAP2 superfamily 186 294 4.6E-13 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS07340 e2e778742d7f2d09d4649cc35b494415 425 SMART SM00014 177 296 9.1E-6 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS07340 e2e778742d7f2d09d4649cc35b494415 425 PRINTS PR00483 Bacterial acid phosphatase class A signature 259 283 6.9E-10 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 DDI_RS07340 e2e778742d7f2d09d4649cc35b494415 425 PRINTS PR00483 Bacterial acid phosphatase class A signature 293 311 6.9E-10 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 DDI_RS07340 e2e778742d7f2d09d4649cc35b494415 425 PRINTS PR00483 Bacterial acid phosphatase class A signature 227 253 6.9E-10 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 DDI_RS07340 e2e778742d7f2d09d4649cc35b494415 425 SUPERFAMILY SSF48317 180 314 2.22E-29 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS07340 e2e778742d7f2d09d4649cc35b494415 425 Gene3D G3DSA:1.20.144.10 83 318 4.9E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDI_RS16065 77b6b5d87e512d42490b9fb95920646d 388 SUPERFAMILY SSF69279 39 190 2.95E-21 T 28-03-2018 DDI_RS16065 77b6b5d87e512d42490b9fb95920646d 388 Pfam PF05954 Phage late control gene D protein (GPD) 126 343 3.1E-14 T 28-03-2018 DDI_RS16065 77b6b5d87e512d42490b9fb95920646d 388 Gene3D G3DSA:3.55.50.10 120 246 6.0E-6 T 28-03-2018 DDI_RS05775 ab1e4486cdddeda3cef8ed03ee335acb 104 Pfam PF13560 Helix-turn-helix domain 11 71 3.3E-6 T 28-03-2018 DDI_RS05775 ab1e4486cdddeda3cef8ed03ee335acb 104 SMART SM00530 14 73 2.3E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS05775 ab1e4486cdddeda3cef8ed03ee335acb 104 Gene3D G3DSA:1.10.260.40 6 82 3.6E-13 T 28-03-2018 DDI_RS05775 ab1e4486cdddeda3cef8ed03ee335acb 104 SUPERFAMILY SSF47413 5 78 1.44E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS02375 71cd25ff804e7cfd8c541565d7085ce8 172 SUPERFAMILY SSF52218 1 168 1.86E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS02375 71cd25ff804e7cfd8c541565d7085ce8 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DDI_RS02375 71cd25ff804e7cfd8c541565d7085ce8 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 9.7E-69 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 DDI_RS02375 71cd25ff804e7cfd8c541565d7085ce8 172 Pfam PF00258 Flavodoxin 5 160 8.6E-26 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDI_RS02375 71cd25ff804e7cfd8c541565d7085ce8 172 Gene3D G3DSA:3.40.50.360 76 172 1.8E-15 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS02375 71cd25ff804e7cfd8c541565d7085ce8 172 Gene3D G3DSA:3.40.50.360 1 75 2.2E-15 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS02375 71cd25ff804e7cfd8c541565d7085ce8 172 PIRSF PIRSF038996 1 171 4.3E-55 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 DDI_RS16765 3b17283587643ab295e6d3ff9108b92f 313 SUPERFAMILY SSF81799 114 213 6.15E-34 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS16765 3b17283587643ab295e6d3ff9108b92f 313 SUPERFAMILY SSF53335 7 113 2.04E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS16765 3b17283587643ab295e6d3ff9108b92f 313 SUPERFAMILY SSF53335 213 311 2.04E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS16765 3b17283587643ab295e6d3ff9108b92f 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.139 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS16765 3b17283587643ab295e6d3ff9108b92f 313 Pfam PF01795 MraW methylase family 5 310 2.3E-115 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS16765 3b17283587643ab295e6d3ff9108b92f 313 Gene3D G3DSA:1.10.150.170 112 215 1.9E-35 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS16765 3b17283587643ab295e6d3ff9108b92f 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 310 9.1E-125 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS16765 3b17283587643ab295e6d3ff9108b92f 313 PIRSF PIRSF004486 1 312 8.7E-99 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS09235 42f001e48007828c43c786aeeb63bd50 503 SUPERFAMILY SSF53743 1 327 7.59E-125 T 28-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 DDI_RS09235 42f001e48007828c43c786aeeb63bd50 503 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.744 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 DDI_RS09235 42f001e48007828c43c786aeeb63bd50 503 PIRSF PIRSF001478 1 500 2.9E-250 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 DDI_RS09235 42f001e48007828c43c786aeeb63bd50 503 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 3.4E-44 T 28-03-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 DDI_RS09235 42f001e48007828c43c786aeeb63bd50 503 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 4.0E-149 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 DDI_RS09235 42f001e48007828c43c786aeeb63bd50 503 SUPERFAMILY SSF50443 329 498 3.66E-69 T 28-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DDI_RS09235 42f001e48007828c43c786aeeb63bd50 503 Pfam PF02610 L-arabinose isomerase 5 359 1.1E-176 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 DDI_RS12095 5979364e852d02e393bb4a923bdf1b44 223 Pfam PF13861 FlgD Tudor-like domain 86 220 2.7E-17 T 28-03-2018 IPR025963 FlgD Tudor-like domain DDI_RS12095 5979364e852d02e393bb4a923bdf1b44 223 Pfam PF03963 Flagellar hook capping protein - N-terminal region 7 78 2.1E-25 T 28-03-2018 IPR005648 Flagellar hook capping protein DDI_RS12095 5979364e852d02e393bb4a923bdf1b44 223 Pfam PF13860 FlgD Ig-like domain 110 180 1.6E-25 T 28-03-2018 IPR025965 FlgD Ig-like domain DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 SMART SM00870 5 323 1.9E-140 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 SUPERFAMILY SSF53774 3 336 1.44E-111 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 Pfam PF00710 Asparaginase, N-terminal 6 187 1.9E-66 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 Gene3D G3DSA:3.40.50.1170 1 206 5.3E-80 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.5E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.5E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.5E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 PIRSF PIRSF500176 2 333 3.8E-112 T 28-03-2018 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 PIRSF PIRSF001220 1 335 1.0E-96 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 336 2.8E-125 T 28-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 Gene3D G3DSA:3.40.50.40 210 339 2.9E-42 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DDI_RS08935 b6e23f2ae976d32f48e7fd207f6de733 339 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DDI_RS18070 4c0dacdf7f30ea27c395eb8671515ffc 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.8E-50 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18070 4c0dacdf7f30ea27c395eb8671515ffc 110 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 1.2E-37 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DDI_RS18070 4c0dacdf7f30ea27c395eb8671515ffc 110 Gene3D G3DSA:3.90.470.10 1 110 3.2E-42 T 28-03-2018 DDI_RS18070 4c0dacdf7f30ea27c395eb8671515ffc 110 SUPERFAMILY SSF54843 1 109 1.83E-42 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DDI_RS18070 4c0dacdf7f30ea27c395eb8671515ffc 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.445 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS18070 4c0dacdf7f30ea27c395eb8671515ffc 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 28-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS03150 1f90395f04f990ab3957b6f61e18c26f 459 Gene3D G3DSA:1.20.1250.20 4 191 2.5E-21 T 28-03-2018 DDI_RS03150 1f90395f04f990ab3957b6f61e18c26f 459 Gene3D G3DSA:1.20.1250.20 251 449 4.1E-12 T 28-03-2018 DDI_RS03150 1f90395f04f990ab3957b6f61e18c26f 459 Pfam PF07690 Major Facilitator Superfamily 13 238 4.2E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS03150 1f90395f04f990ab3957b6f61e18c26f 459 SUPERFAMILY SSF103473 7 196 5.23E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS03150 1f90395f04f990ab3957b6f61e18c26f 459 SUPERFAMILY SSF103473 242 444 5.23E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS05280 6493f1dd1b18d286f9c2e6ffe343c495 229 Gene3D G3DSA:1.10.3720.10 3 228 1.1E-39 T 28-03-2018 DDI_RS05280 6493f1dd1b18d286f9c2e6ffe343c495 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 221 1.5E-72 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 DDI_RS05280 6493f1dd1b18d286f9c2e6ffe343c495 229 SUPERFAMILY SSF161098 4 220 4.45E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05280 6493f1dd1b18d286f9c2e6ffe343c495 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 1.1E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01820 52369486518ebad0679107c96dff428b 76 Pfam PF10809 Protein of unknown function (DUF2732) 1 74 1.7E-27 T 28-03-2018 IPR020126 Protein of unknown function DUF2732 DDI_RS01820 52369486518ebad0679107c96dff428b 76 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 12 73 2.0E-9 T 28-03-2018 IPR020126 Protein of unknown function DUF2732 DDI_RS20950 1f44b1d63aaca3c406959b3c30ee8eea 329 Pfam PF01757 Acyltransferase family 19 306 1.8E-13 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 Gene3D G3DSA:3.40.50.2300 63 173 1.0E-20 T 28-03-2018 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 Pfam PF13377 Periplasmic binding protein-like domain 180 333 1.6E-14 T 28-03-2018 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 SMART SM00354 6 79 6.7E-31 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 28-03-2018 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 SUPERFAMILY SSF53822 66 328 8.25E-46 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 1.5E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 Gene3D G3DSA:1.10.10.10 1 20 0.4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 Gene3D G3DSA:3.40.50.2300 174 334 9.6E-25 T 28-03-2018 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 8 319 2.0E-119 T 28-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 Gene3D G3DSA:1.10.260.40 21 62 1.5E-22 T 28-03-2018 DDI_RS00555 67ce5d69b407ba5d861895d30d8d3e6a 343 SUPERFAMILY SSF47413 7 64 1.13E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 Gene3D G3DSA:3.30.70.260 251 338 3.7E-23 T 28-03-2018 DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 SUPERFAMILY SSF52540 1 241 8.75E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 Gene3D G3DSA:3.40.50.300 1 250 7.1E-75 T 28-03-2018 DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 SMART SM00382 31 227 1.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 SMART SM00930 259 336 6.3E-24 T 28-03-2018 IPR018449 NIL domain DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 Pfam PF00005 ABC transporter 23 170 5.3E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 Pfam PF09383 NIL domain 261 335 1.4E-17 T 28-03-2018 IPR018449 NIL domain DDI_RS07910 b8035120712b05c26dddc63a3e92d575 338 SUPERFAMILY SSF55021 249 337 1.72E-18 T 28-03-2018 DDI_RS18140 62d712b57135e75e2fd3a3c5ba2b2a5c 119 SUPERFAMILY SSF75169 1 119 1.13E-38 T 28-03-2018 IPR027396 DsrEFH-like DDI_RS18140 62d712b57135e75e2fd3a3c5ba2b2a5c 119 Pfam PF02635 DsrE/DsrF-like family 2 119 1.1E-24 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein DDI_RS18140 62d712b57135e75e2fd3a3c5ba2b2a5c 119 Gene3D G3DSA:3.40.1260.10 1 119 8.7E-21 T 28-03-2018 DDI_RS18140 62d712b57135e75e2fd3a3c5ba2b2a5c 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 35.853 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF DDI_RS18140 62d712b57135e75e2fd3a3c5ba2b2a5c 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 1.1E-48 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF DDI_RS20665 b9f6a53054f1e6197b1c551138c6d7d3 191 Gene3D G3DSA:3.40.50.880 1 189 1.0E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS20665 b9f6a53054f1e6197b1c551138c6d7d3 191 SUPERFAMILY SSF52317 3 169 7.98E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS20665 b9f6a53054f1e6197b1c551138c6d7d3 191 Pfam PF01965 DJ-1/PfpI family 3 165 1.0E-28 T 28-03-2018 IPR002818 DJ-1/PfpI DDI_RS07875 775fafe73b71cb841249fbb0db6e725a 234 SUPERFAMILY SSF55620 17 232 1.7E-73 T 28-03-2018 DDI_RS07875 775fafe73b71cb841249fbb0db6e725a 234 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 157 167 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDI_RS07875 775fafe73b71cb841249fbb0db6e725a 234 Gene3D G3DSA:3.30.1130.10 100 232 2.7E-46 T 28-03-2018 DDI_RS07875 775fafe73b71cb841249fbb0db6e725a 234 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 51 231 8.0E-85 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDI_RS07875 775fafe73b71cb841249fbb0db6e725a 234 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 47 230 33.71 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDI_RS07875 775fafe73b71cb841249fbb0db6e725a 234 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 109 125 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDI_RS07875 775fafe73b71cb841249fbb0db6e725a 234 Pfam PF01227 GTP cyclohydrolase I 51 229 3.5E-63 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDI_RS07875 775fafe73b71cb841249fbb0db6e725a 234 Gene3D G3DSA:1.10.286.10 20 96 4.3E-22 T 28-03-2018 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 Gene3D G3DSA:3.40.50.620 1 190 2.0E-74 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 6.2E-116 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 2.1E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.1E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.1E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.1E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 Gene3D G3DSA:1.10.240.10 191 313 7.2E-30 T 28-03-2018 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.365 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 SUPERFAMILY SSF52374 5 330 8.44E-99 T 28-03-2018 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS18350 ae6da4eadc4767afbc6495b993725d20 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 1.8E-87 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS01230 355226af77907eb8cde381159d8b56b4 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 316 4.4E-86 T 28-03-2018 DDI_RS01230 355226af77907eb8cde381159d8b56b4 325 SUPERFAMILY SSF56784 113 316 5.91E-48 T 28-03-2018 IPR023214 HAD-like domain DDI_RS01230 355226af77907eb8cde381159d8b56b4 325 Gene3D G3DSA:3.40.50.1000 171 316 1.2E-28 T 28-03-2018 IPR023214 HAD-like domain DDI_RS01230 355226af77907eb8cde381159d8b56b4 325 Gene3D G3DSA:1.10.150.210 124 170 1.0E-23 T 28-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 DDI_RS01230 355226af77907eb8cde381159d8b56b4 325 Pfam PF00702 haloacid dehalogenase-like hydrolase 113 285 1.8E-16 T 28-03-2018 DDI_RS01230 355226af77907eb8cde381159d8b56b4 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 284 7.3E-25 T 28-03-2018 DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 SUPERFAMILY SSF51735 6 245 3.4E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 6.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 7.3E-61 T 28-03-2018 DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 Gene3D G3DSA:3.40.50.720 1 40 1.2E-9 T 28-03-2018 DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 Gene3D G3DSA:3.40.50.720 41 246 1.1E-60 T 28-03-2018 DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS03865 ffde7af4dda46d007f146c187280e61a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS08300 1442be2d7eeb83388586ddf4e1d1322e 175 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 7 170 7.5E-56 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 DDI_RS08300 1442be2d7eeb83388586ddf4e1d1322e 175 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 7 170 5.6E-60 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 DDI_RS20165 9b2728063f49adb3b6abecc6119f5842 258 SMART SM00382 36 238 1.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20165 9b2728063f49adb3b6abecc6119f5842 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 2.5E-121 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DDI_RS20165 9b2728063f49adb3b6abecc6119f5842 258 Pfam PF00005 ABC transporter 27 182 1.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20165 9b2728063f49adb3b6abecc6119f5842 258 SUPERFAMILY SSF52540 12 245 9.11E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20165 9b2728063f49adb3b6abecc6119f5842 258 Gene3D G3DSA:3.40.50.300 9 256 2.4E-64 T 28-03-2018 DDI_RS20165 9b2728063f49adb3b6abecc6119f5842 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS01280 770623115a4de8252faddbae96c8990f 389 SUPERFAMILY SSF55031 181 293 2.84E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS01280 770623115a4de8252faddbae96c8990f 389 SUPERFAMILY SSF53187 6 194 4.57E-83 T 28-03-2018 DDI_RS01280 770623115a4de8252faddbae96c8990f 389 SUPERFAMILY SSF53187 295 383 4.57E-83 T 28-03-2018 DDI_RS01280 770623115a4de8252faddbae96c8990f 389 Pfam PF01546 Peptidase family M20/M25/M40 70 380 1.3E-34 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS01280 770623115a4de8252faddbae96c8990f 389 PIRSF PIRSF005962 1 387 1.4E-124 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS01280 770623115a4de8252faddbae96c8990f 389 Gene3D G3DSA:3.40.630.10 236 388 1.3E-24 T 28-03-2018 DDI_RS01280 770623115a4de8252faddbae96c8990f 389 Gene3D G3DSA:3.40.630.10 6 216 3.5E-48 T 28-03-2018 DDI_RS01280 770623115a4de8252faddbae96c8990f 389 Pfam PF07687 Peptidase dimerisation domain 185 276 8.9E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS01280 770623115a4de8252faddbae96c8990f 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 369 7.8E-101 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS00700 f536de4a9f2d32bc9ff1664f6d47f5cd 155 SUPERFAMILY SSF51197 1 152 1.33E-44 T 28-03-2018 DDI_RS00700 f536de4a9f2d32bc9ff1664f6d47f5cd 155 Gene3D G3DSA:2.60.120.370 1 154 6.6E-54 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family DDI_RS00700 f536de4a9f2d32bc9ff1664f6d47f5cd 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 1.5E-49 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family DDI_RS00700 f536de4a9f2d32bc9ff1664f6d47f5cd 155 Pfam PF04074 Domain of unknown function (DUF386) 1 149 5.2E-45 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family DDI_RS08565 2d47f19e2de0d45b2f2260cb1e7bb5e6 595 SUPERFAMILY SSF69255 366 446 1.54E-17 T 28-03-2018 DDI_RS08565 2d47f19e2de0d45b2f2260cb1e7bb5e6 595 SUPERFAMILY SSF69279 22 177 4.14E-15 T 28-03-2018 DDI_RS08565 2d47f19e2de0d45b2f2260cb1e7bb5e6 595 Gene3D G3DSA:2.40.50.260 367 473 1.1E-21 T 28-03-2018 DDI_RS08565 2d47f19e2de0d45b2f2260cb1e7bb5e6 595 Pfam PF05954 Phage late control gene D protein (GPD) 66 333 3.8E-9 T 28-03-2018 DDI_RS08565 2d47f19e2de0d45b2f2260cb1e7bb5e6 595 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 493 9.7E-49 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DDI_RS08565 2d47f19e2de0d45b2f2260cb1e7bb5e6 595 SUPERFAMILY SSF69349 436 591 4.0E-10 T 28-03-2018 DDI_RS08565 2d47f19e2de0d45b2f2260cb1e7bb5e6 595 Gene3D G3DSA:3.55.50.10 112 186 0.001 T 28-03-2018 DDI_RS19495 186fde80181fe108fa7a40d580be26b2 70 Gene3D G3DSA:1.10.260.40 1 69 4.0E-6 T 28-03-2018 DDI_RS19495 186fde80181fe108fa7a40d580be26b2 70 SUPERFAMILY SSF47413 1 45 9.27E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS21490 c1fd845f146a56514fe659bf9975f9c3 382 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 10 373 2.1E-159 T 28-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 DDI_RS21490 c1fd845f146a56514fe659bf9975f9c3 382 Gene3D G3DSA:3.20.20.70 25 375 5.2E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS21490 c1fd845f146a56514fe659bf9975f9c3 382 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 264 366 1.9E-21 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDI_RS21490 c1fd845f146a56514fe659bf9975f9c3 382 Pfam PF04055 Radical SAM superfamily 88 227 2.4E-7 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDI_RS21490 c1fd845f146a56514fe659bf9975f9c3 382 SUPERFAMILY SSF102114 42 369 3.27E-55 T 28-03-2018 DDI_RS21490 c1fd845f146a56514fe659bf9975f9c3 382 SMART SM00876 264 367 1.5E-30 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDI_RS16105 cd6e6e1053599f3db4dd7055a4582816 173 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 5 173 1.1E-72 T 28-03-2018 IPR006498 Tail tube protein DDI_RS16105 cd6e6e1053599f3db4dd7055a4582816 173 Pfam PF04985 Phage tail tube protein FII 7 172 1.2E-54 T 28-03-2018 IPR006498 Tail tube protein DDI_RS14935 1e55d48ed8bd29bd270c73d56af6ab2c 532 PIRSF PIRSF002741 3 527 4.3E-89 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS14935 1e55d48ed8bd29bd270c73d56af6ab2c 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 438 1.3E-77 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS14935 1e55d48ed8bd29bd270c73d56af6ab2c 532 SUPERFAMILY SSF53850 45 523 1.3E-120 T 28-03-2018 DDI_RS14935 1e55d48ed8bd29bd270c73d56af6ab2c 532 Gene3D G3DSA:3.90.76.10 73 168 1.8E-27 T 28-03-2018 DDI_RS14935 1e55d48ed8bd29bd270c73d56af6ab2c 532 Gene3D G3DSA:3.40.190.10 169 302 2.2E-35 T 28-03-2018 DDI_RS14935 1e55d48ed8bd29bd270c73d56af6ab2c 532 Gene3D G3DSA:3.10.105.10 303 496 1.7E-44 T 28-03-2018 DDI_RS09485 08ce31bcf93c1c58fa2874c5a748a65c 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 269 5.5E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09485 08ce31bcf93c1c58fa2874c5a748a65c 284 SUPERFAMILY SSF161098 49 266 1.83E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09485 08ce31bcf93c1c58fa2874c5a748a65c 284 Gene3D G3DSA:1.10.3720.10 4 280 4.9E-35 T 28-03-2018 DDI_RS18360 74f3624c38be2e87dbb2474684b4045a 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDI_RS18360 74f3624c38be2e87dbb2474684b4045a 225 PIRSF PIRSF001461 1 225 3.3E-106 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDI_RS18360 74f3624c38be2e87dbb2474684b4045a 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.3E-96 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDI_RS18360 74f3624c38be2e87dbb2474684b4045a 225 Gene3D G3DSA:3.20.20.70 1 220 6.1E-87 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS18360 74f3624c38be2e87dbb2474684b4045a 225 SUPERFAMILY SSF51366 4 218 8.14E-77 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 DDI_RS18360 74f3624c38be2e87dbb2474684b4045a 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.8E-91 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDI_RS18360 74f3624c38be2e87dbb2474684b4045a 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 5.4E-146 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 SUPERFAMILY SSF52096 25 283 3.73E-85 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 Gene3D G3DSA:3.90.226.10 13 289 8.2E-68 T 28-03-2018 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 3.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 3.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 3.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 3.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 3.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 Pfam PF01039 Carboxyl transferase domain 103 240 7.3E-14 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 DDI_RS12840 1ceafa3c70c05f736d8309fdfbdb2a9b 300 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.288 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 DDI_RS09280 ecd8ea0e9f2960c09a596bff3971c0e5 338 Hamap MF_00540 Adenosine deaminase [add]. 1 333 51.102 T 28-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 DDI_RS09280 ecd8ea0e9f2960c09a596bff3971c0e5 338 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 7 332 2.6E-104 T 28-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 DDI_RS09280 ecd8ea0e9f2960c09a596bff3971c0e5 338 SUPERFAMILY SSF51556 6 327 7.19E-74 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS09280 ecd8ea0e9f2960c09a596bff3971c0e5 338 Gene3D G3DSA:3.20.20.140 4 332 5.5E-72 T 28-03-2018 DDI_RS09280 ecd8ea0e9f2960c09a596bff3971c0e5 338 Pfam PF00962 Adenosine/AMP deaminase 6 329 2.1E-88 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 DDI_RS02935 a9b2411e290e7c5876bf8235f23c2ef1 292 Gene3D G3DSA:3.40.50.10330 1 141 1.0E-37 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 DDI_RS02935 a9b2411e290e7c5876bf8235f23c2ef1 292 Gene3D G3DSA:2.60.200.30 142 264 5.7E-40 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DDI_RS02935 a9b2411e290e7c5876bf8235f23c2ef1 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.112 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DDI_RS02935 a9b2411e290e7c5876bf8235f23c2ef1 292 Pfam PF01513 ATP-NAD kinase 8 271 2.1E-74 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DDI_RS02935 a9b2411e290e7c5876bf8235f23c2ef1 292 SUPERFAMILY SSF111331 8 289 6.28E-92 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 Gene3D G3DSA:1.10.10.10 1 84 4.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 Pfam PF03466 LysR substrate binding domain 87 288 6.2E-51 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 SUPERFAMILY SSF53850 88 288 8.39E-49 T 28-03-2018 DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 Gene3D G3DSA:3.40.190.10 178 264 7.0E-20 T 28-03-2018 DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 Gene3D G3DSA:3.40.190.10 88 177 1.4E-22 T 28-03-2018 DDI_RS07765 cf28f62407c900983448df1460fbeb92 292 SUPERFAMILY SSF46785 2 109 7.07E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06330 019c6ed3ce0817192066bd188e456037 335 SUPERFAMILY SSF53850 58 263 5.8E-33 T 28-03-2018 DDI_RS06330 019c6ed3ce0817192066bd188e456037 335 Gene3D G3DSA:3.40.190.10 148 335 4.5E-27 T 28-03-2018 DDI_RS06330 019c6ed3ce0817192066bd188e456037 335 Pfam PF09084 NMT1/THI5 like 64 256 4.5E-20 T 28-03-2018 IPR015168 SsuA/THI5-like DDI_RS06330 019c6ed3ce0817192066bd188e456037 335 Gene3D G3DSA:3.40.190.10 26 147 6.5E-8 T 28-03-2018 DDI_RS18325 7de86ee11725d5c0aeb17f4bc7da9a54 375 Gene3D G3DSA:2.160.20.10 23 368 3.1E-51 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS18325 7de86ee11725d5c0aeb17f4bc7da9a54 375 Pfam PF00544 Pectate lyase 73 279 6.2E-92 T 28-03-2018 IPR002022 Pectate lyase DDI_RS18325 7de86ee11725d5c0aeb17f4bc7da9a54 375 SUPERFAMILY SSF51126 25 367 1.65E-83 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS18325 7de86ee11725d5c0aeb17f4bc7da9a54 375 SMART SM00656 50 285 8.1E-111 T 28-03-2018 IPR002022 Pectate lyase DDI_RS14390 25239e058d442915ede98f6538206506 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 1.1E-31 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DDI_RS14390 25239e058d442915ede98f6538206506 105 SUPERFAMILY SSF46973 1 98 6.28E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DDI_RS14390 25239e058d442915ede98f6538206506 105 Gene3D G3DSA:1.20.58.80 1 99 1.1E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DDI_RS14390 25239e058d442915ede98f6538206506 105 PIRSF PIRSF000699 1 104 3.5E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DDI_RS09555 a225a0010d1d920b4937263cc45db2fe 174 Gene3D G3DSA:2.60.40.200 20 174 1.4E-35 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDI_RS09555 a225a0010d1d920b4937263cc45db2fe 174 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 162 173 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDI_RS09555 a225a0010d1d920b4937263cc45db2fe 174 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 173 3.9E-30 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDI_RS09555 a225a0010d1d920b4937263cc45db2fe 174 SUPERFAMILY SSF49329 23 173 1.7E-46 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDI_RS18850 17651ae48ffe24de1f669a027da1196b 358 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 5 349 26.775 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 DDI_RS18850 17651ae48ffe24de1f669a027da1196b 358 Pfam PF00953 Glycosyl transferase family 4 70 229 7.1E-26 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 DDI_RS18850 17651ae48ffe24de1f669a027da1196b 358 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 5 346 1.9E-145 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 DDI_RS11600 407123c78de6fb5da70218711904b4e7 333 Pfam PF01032 FecCD transport family 29 330 1.2E-80 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 DDI_RS11600 407123c78de6fb5da70218711904b4e7 333 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 8 333 32.052 T 28-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 DDI_RS11600 407123c78de6fb5da70218711904b4e7 333 Gene3D G3DSA:1.10.3470.10 8 333 7.3E-60 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS11600 407123c78de6fb5da70218711904b4e7 333 SUPERFAMILY SSF81345 12 330 8.5E-79 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS06680 c05193843df3630ca8f85ebd88ff9f45 373 Pfam PF09375 Imelysin 134 365 7.3E-43 T 28-03-2018 IPR018976 Peptidase M75, Imelysin DDI_RS06680 c05193843df3630ca8f85ebd88ff9f45 373 Pfam PF13473 Cupredoxin-like domain 14 114 3.6E-22 T 28-03-2018 IPR028096 EfeO-type cupredoxin-like domain DDI_RS06680 c05193843df3630ca8f85ebd88ff9f45 373 SUPERFAMILY SSF49503 13 114 2.03E-6 T 28-03-2018 IPR008972 Cupredoxin DDI_RS06505 7dabfb23f3a109201442f1fa4bc3dc8d 275 SUPERFAMILY SSF81345 4 263 5.23E-42 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS06505 7dabfb23f3a109201442f1fa4bc3dc8d 275 Pfam PF00950 ABC 3 transport family 13 266 5.7E-89 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DDI_RS06505 7dabfb23f3a109201442f1fa4bc3dc8d 275 Gene3D G3DSA:1.10.3470.10 4 274 1.7E-26 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS07405 4c9fb5de0a03e3b84ef94f5263f7a068 260 SUPERFAMILY SSF88713 4 251 1.7E-85 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DDI_RS07405 4c9fb5de0a03e3b84ef94f5263f7a068 260 Gene3D G3DSA:3.20.20.370 4 251 5.3E-91 T 28-03-2018 DDI_RS07405 4c9fb5de0a03e3b84ef94f5263f7a068 260 Pfam PF03746 LamB/YcsF family 5 242 3.1E-86 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF DDI_RS03235 90d3f3547dc6a907b71fefeb573b0eac 204 SMART SM00530 15 71 1.3E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS03235 90d3f3547dc6a907b71fefeb573b0eac 204 SUPERFAMILY SSF47413 10 71 6.22E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS03235 90d3f3547dc6a907b71fefeb573b0eac 204 Gene3D G3DSA:1.10.260.40 1 80 2.2E-11 T 28-03-2018 DDI_RS03235 90d3f3547dc6a907b71fefeb573b0eac 204 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 15 74 1.4E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS08425 f0dee26e45db572e0d6bccdab457597f 370 Gene3D G3DSA:3.20.20.70 6 361 1.7E-94 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS08425 f0dee26e45db572e0d6bccdab457597f 370 SUPERFAMILY SSF51395 4 353 1.92E-89 T 28-03-2018 DDI_RS08425 f0dee26e45db572e0d6bccdab457597f 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 231 6.0E-58 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 Pfam PF00270 DEAD/DEAH box helicase 25 197 4.6E-50 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 SUPERFAMILY SSF52540 75 361 3.25E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 448 51.579 T 28-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 SMART SM00487 20 223 2.4E-62 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 SMART SM00490 259 340 1.3E-31 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 Gene3D G3DSA:3.40.50.300 7 224 1.3E-58 T 28-03-2018 DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 Gene3D G3DSA:3.40.50.300 225 450 8.4E-48 T 28-03-2018 DDI_RS07245 6e8cab3172f87890aebaa10cd1468dec 452 Pfam PF00271 Helicase conserved C-terminal domain 234 339 1.3E-26 T 28-03-2018 IPR001650 Helicase, C-terminal DDI_RS16270 17e83dd334516486e357b7b49f8eaadc 457 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DDI_RS16270 17e83dd334516486e357b7b49f8eaadc 457 Pfam PF00324 Amino acid permease 17 449 8.9E-118 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 DDI_RS16270 17e83dd334516486e357b7b49f8eaadc 457 PIRSF PIRSF006060 1 456 5.3E-70 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 SUPERFAMILY SSF48173 197 472 9.03E-108 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 Gene3D G3DSA:3.40.50.620 1 154 6.6E-43 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 Pfam PF00875 DNA photolyase 5 173 1.7E-43 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 Pfam PF03441 FAD binding domain of DNA photolyase 274 468 1.5E-82 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 SUPERFAMILY SSF52425 3 198 7.46E-54 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 324 336 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 344 363 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 PRINTS PR00147 DNA photolyase signature 144 160 2.7E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 PRINTS PR00147 DNA photolyase signature 344 362 2.7E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 PRINTS PR00147 DNA photolyase signature 324 340 2.7E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 PRINTS PR00147 DNA photolyase signature 383 397 2.7E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 Gene3D G3DSA:1.25.40.80 155 289 3.6E-26 T 28-03-2018 DDI_RS05065 5238dc11b0c7bb89dafe099bb5cb9b67 476 Gene3D G3DSA:1.10.579.10 293 472 4.8E-74 T 28-03-2018 DDI_RS14810 0be975b4c0917fde6fadefbd81dba272 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.442 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 DDI_RS14810 0be975b4c0917fde6fadefbd81dba272 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 DDI_RS14810 0be975b4c0917fde6fadefbd81dba272 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 DDI_RS14810 0be975b4c0917fde6fadefbd81dba272 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 DDI_RS14810 0be975b4c0917fde6fadefbd81dba272 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 1.4E-31 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 Gene3D G3DSA:3.30.2420.10 175 250 3.5E-16 T 28-03-2018 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 Pfam PF16031 TonB N-terminal region 38 168 1.7E-11 T 28-03-2018 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 172 244 2.5E-18 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 PRINTS PR01374 Gram-negative bacterial tonB protein signature 187 205 4.2E-33 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 PRINTS PR01374 Gram-negative bacterial tonB protein signature 107 117 4.2E-33 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 PRINTS PR01374 Gram-negative bacterial tonB protein signature 206 223 4.2E-33 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 PRINTS PR01374 Gram-negative bacterial tonB protein signature 166 187 4.2E-33 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 171 239 5.9E-15 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 DDI_RS09075 e082a8b5d0c512c119a4d1ab2f8e9540 250 SUPERFAMILY SSF74653 164 233 1.96E-19 T 28-03-2018 DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 Gene3D G3DSA:3.40.190.10 181 258 7.2E-12 T 28-03-2018 DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 Gene3D G3DSA:1.10.10.10 1 84 3.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 Pfam PF03466 LysR substrate binding domain 91 286 7.8E-26 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 SUPERFAMILY SSF53850 91 286 1.81E-30 T 28-03-2018 DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 Gene3D G3DSA:3.40.190.10 91 180 1.5E-13 T 28-03-2018 DDI_RS03120 28b20d21b7a94ff35ca78429ff3ba71d 288 SUPERFAMILY SSF46785 6 86 2.64E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS16715 ed3de36fca4c38ffc838eaccad894017 284 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 25 254 24.243 T 28-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 DDI_RS16715 ed3de36fca4c38ffc838eaccad894017 284 Pfam PF03799 Cell division protein FtsQ 129 246 2.2E-23 T 28-03-2018 IPR005548 Cell division protein FtsQ/DivIB DDI_RS16715 ed3de36fca4c38ffc838eaccad894017 284 Pfam PF08478 POTRA domain, FtsQ-type 56 125 4.5E-22 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type DDI_RS02885 47cfd1af40374ea6b5f377b58940f508 255 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 15 250 9.0E-23 T 28-03-2018 DDI_RS12055 8700fdf01afbd40083feadbbfff34e4d 309 Gene3D G3DSA:1.20.1330.10 38 283 1.0E-15 T 28-03-2018 DDI_RS12055 8700fdf01afbd40083feadbbfff34e4d 309 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 186 1.3E-51 T 28-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 DDI_RS12055 8700fdf01afbd40083feadbbfff34e4d 309 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 140 4.2E-14 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DDI_RS12055 8700fdf01afbd40083feadbbfff34e4d 309 SUPERFAMILY SSF64518 1 307 3.14E-47 T 28-03-2018 DDI_RS07985 8c7b1b6437a40ccbad83057bc220b4ec 281 Gene3D G3DSA:1.10.3720.10 11 273 1.2E-39 T 28-03-2018 DDI_RS07985 8c7b1b6437a40ccbad83057bc220b4ec 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 269 2.4E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07985 8c7b1b6437a40ccbad83057bc220b4ec 281 SUPERFAMILY SSF161098 8 267 8.13E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05305 2fd349f2d3d60cf30c13937a84b4d819 358 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 57 141 0.002 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDI_RS05305 2fd349f2d3d60cf30c13937a84b4d819 358 Pfam PF13407 Periplasmic binding protein domain 56 302 6.2E-28 T 28-03-2018 IPR025997 Periplasmic binding protein DDI_RS05305 2fd349f2d3d60cf30c13937a84b4d819 358 SUPERFAMILY SSF53822 42 308 5.72E-43 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS05305 2fd349f2d3d60cf30c13937a84b4d819 358 Gene3D G3DSA:3.40.50.2300 33 158 2.3E-16 T 28-03-2018 DDI_RS05305 2fd349f2d3d60cf30c13937a84b4d819 358 Gene3D G3DSA:3.40.50.2300 159 306 1.2E-20 T 28-03-2018 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 Pfam PF02119 Flagellar P-ring protein 25 368 1.1E-135 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 369 38.496 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 25 40 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 40 55 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 191 209 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 165 183 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 255 267 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS12070 460ec7dfe230110c63ad9ace8eccf712 369 PRINTS PR01010 Flagellar P-ring protein signature 60 75 1.1E-89 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DDI_RS05415 3f3bf7af5b66af492ff4f8116a05066b 285 SUPERFAMILY SSF53448 6 208 6.84E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05415 3f3bf7af5b66af492ff4f8116a05066b 285 Pfam PF00535 Glycosyl transferase family 2 9 137 6.9E-30 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS05415 3f3bf7af5b66af492ff4f8116a05066b 285 Gene3D G3DSA:3.90.550.10 2 252 5.8E-44 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS06270 2f21eb149182bccd366aef834bded508 161 SUPERFAMILY SSF46785 32 148 2.52E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06270 2f21eb149182bccd366aef834bded508 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 5.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06270 2f21eb149182bccd366aef834bded508 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 5.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06270 2f21eb149182bccd366aef834bded508 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 5.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06270 2f21eb149182bccd366aef834bded508 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 5.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06270 2f21eb149182bccd366aef834bded508 161 Gene3D G3DSA:1.10.10.10 2 150 1.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06270 2f21eb149182bccd366aef834bded508 161 Pfam PF01047 MarR family 48 101 3.1E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS06270 2f21eb149182bccd366aef834bded508 161 SMART SM00347 37 137 6.3E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS00210 ae54db6b346a5e6685ce5d238eb3da18 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DDI_RS00210 ae54db6b346a5e6685ce5d238eb3da18 90 SUPERFAMILY SSF55594 4 90 7.07E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS00210 ae54db6b346a5e6685ce5d238eb3da18 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.1E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS00210 ae54db6b346a5e6685ce5d238eb3da18 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 4.0E-10 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS00210 ae54db6b346a5e6685ce5d238eb3da18 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 4.0E-10 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS00210 ae54db6b346a5e6685ce5d238eb3da18 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 4.0E-10 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS00210 ae54db6b346a5e6685ce5d238eb3da18 90 Gene3D G3DSA:3.30.1340.10 1 84 2.4E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS00210 ae54db6b346a5e6685ce5d238eb3da18 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 6.9E-21 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like DDI_RS10755 50c4f9f9af6b9646139dc4cd78c40132 389 Pfam PF17482 Phage tail sheath C-terminal domain 274 376 1.4E-18 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain DDI_RS10755 50c4f9f9af6b9646139dc4cd78c40132 389 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 107 273 9.0E-37 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 Gene3D G3DSA:3.40.640.10 146 393 6.1E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 SUPERFAMILY SSF53383 132 487 6.61E-86 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 4.8E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 4.8E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 5.5E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 Pfam PF00155 Aminotransferase class I and II 157 479 6.1E-23 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 Gene3D G3DSA:1.10.10.10 12 86 1.6E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 SUPERFAMILY SSF46785 17 87 2.03E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 SMART SM00345 25 84 1.6E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS10485 68f4d9387354585508c8723d318ca8e8 495 Gene3D G3DSA:3.90.1150.10 394 490 7.6E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS08875 3ad709c415f795ee2a52ac9eb26c0d63 112 Pfam PF10709 Protein of unknown function (DUF2511) 25 111 3.8E-41 T 28-03-2018 IPR019648 Protein of unknown function DUF2511 DDI_RS15170 c4336f445865a689352d28f1c736983d 414 SUPERFAMILY SSF53383 9 391 3.75E-91 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS15170 c4336f445865a689352d28f1c736983d 414 PIRSF PIRSF000524 8 412 3.1E-105 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 DDI_RS15170 c4336f445865a689352d28f1c736983d 414 Gene3D G3DSA:3.40.640.10 25 296 1.3E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS15170 c4336f445865a689352d28f1c736983d 414 Gene3D G3DSA:3.90.1150.10 297 414 8.3E-34 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS15170 c4336f445865a689352d28f1c736983d 414 Pfam PF00266 Aminotransferase class-V 16 352 6.6E-25 T 28-03-2018 IPR000192 Aminotransferase class V domain DDI_RS19135 690ff2569a36da50581ffaebb75c5f0b 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 8.4E-8 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 DDI_RS19135 690ff2569a36da50581ffaebb75c5f0b 248 Gene3D G3DSA:3.40.50.80 97 248 8.5E-26 T 28-03-2018 DDI_RS19135 690ff2569a36da50581ffaebb75c5f0b 248 SUPERFAMILY SSF52343 103 248 1.44E-36 T 28-03-2018 DDI_RS19135 690ff2569a36da50581ffaebb75c5f0b 248 SUPERFAMILY SSF63380 3 99 1.27E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 DDI_RS19135 690ff2569a36da50581ffaebb75c5f0b 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 4.6E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDI_RS19135 690ff2569a36da50581ffaebb75c5f0b 248 Gene3D G3DSA:2.40.30.10 1 95 7.4E-19 T 28-03-2018 DDI_RS16570 432a8215a6c833975d98e47f9ac21e6f 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 6.0E-51 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 DDI_RS16570 432a8215a6c833975d98e47f9ac21e6f 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.761 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 DDI_RS16570 432a8215a6c833975d98e47f9ac21e6f 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 2.0E-44 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 DDI_RS16570 432a8215a6c833975d98e47f9ac21e6f 120 PIRSF PIRSF006287 1 120 2.6E-49 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 DDI_RS02325 8ede568801018d148a0ffb9a11c6e6d5 262 SUPERFAMILY SSF117856 31 261 3.92E-81 T 28-03-2018 DDI_RS02325 8ede568801018d148a0ffb9a11c6e6d5 262 Gene3D G3DSA:3.30.1330.80 29 119 4.9E-33 T 28-03-2018 DDI_RS02325 8ede568801018d148a0ffb9a11c6e6d5 262 PIRSF PIRSF001332 17 262 3.0E-93 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DDI_RS02325 8ede568801018d148a0ffb9a11c6e6d5 262 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 31 259 6.1E-89 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DDI_RS02325 8ede568801018d148a0ffb9a11c6e6d5 262 Pfam PF03306 Alpha-acetolactate decarboxylase 32 249 7.4E-84 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DDI_RS02325 8ede568801018d148a0ffb9a11c6e6d5 262 Gene3D G3DSA:3.30.1330.80 120 226 1.5E-42 T 28-03-2018 DDI_RS03735 a620cd775206ef9b2ce276e30d79c1a7 243 Pfam PF00696 Amino acid kinase family 11 219 7.1E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS03735 a620cd775206ef9b2ce276e30d79c1a7 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.3E-103 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DDI_RS03735 a620cd775206ef9b2ce276e30d79c1a7 243 SUPERFAMILY SSF53633 7 240 4.84E-72 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS03735 a620cd775206ef9b2ce276e30d79c1a7 243 Gene3D G3DSA:3.40.1160.10 2 241 9.7E-43 T 28-03-2018 DDI_RS03735 a620cd775206ef9b2ce276e30d79c1a7 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.576 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DDI_RS03735 a620cd775206ef9b2ce276e30d79c1a7 243 PIRSF PIRSF005650 4 243 1.0E-89 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DDI_RS17725 67eb56e85f5e174050efe72794815cd7 278 SUPERFAMILY SSF161098 84 266 8.76E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17725 67eb56e85f5e174050efe72794815cd7 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 270 3.6E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17725 67eb56e85f5e174050efe72794815cd7 278 Gene3D G3DSA:1.10.3720.10 27 278 4.1E-32 T 28-03-2018 DDI_RS13950 1e5686b88bf91f0dde31c1b715daeec0 127 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 46 96 1.5E-19 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA DDI_RS13950 1e5686b88bf91f0dde31c1b715daeec0 127 Gene3D G3DSA:1.10.10.10 48 108 1.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 Gene3D G3DSA:3.40.50.180 156 350 2.4E-81 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 Pfam PF01339 CheB methylesterase 160 337 6.9E-63 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 SMART SM00448 4 119 1.5E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 SUPERFAMILY SSF52172 1 108 1.02E-27 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 Pfam PF00072 Response regulator receiver domain 6 109 4.9E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 343 41.839 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 PIRSF PIRSF000876 1 347 1.6E-139 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 Gene3D G3DSA:3.40.50.2300 1 155 5.5E-27 T 28-03-2018 DDI_RS12150 629486dc7b7065d9ca7cdbb4cd67eb61 350 SUPERFAMILY SSF52738 157 343 1.7E-75 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DDI_RS05745 095be8e692da3c1782e088f83777fa05 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 65 2.0E-24 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type DDI_RS05745 095be8e692da3c1782e088f83777fa05 69 SUPERFAMILY SSF57716 35 68 4.13E-7 T 28-03-2018 DDI_RS05745 095be8e692da3c1782e088f83777fa05 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 31 66 5.0E-12 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DDI_RS06780 0caf12764d320129de38259d9e59fd7b 508 Pfam PF07690 Major Facilitator Superfamily 20 412 4.9E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS06780 0caf12764d320129de38259d9e59fd7b 508 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 494 9.0E-144 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 DDI_RS06780 0caf12764d320129de38259d9e59fd7b 508 Gene3D G3DSA:1.20.1250.20 255 504 9.4E-24 T 28-03-2018 DDI_RS06780 0caf12764d320129de38259d9e59fd7b 508 SUPERFAMILY SSF103473 10 198 4.19E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS06780 0caf12764d320129de38259d9e59fd7b 508 SUPERFAMILY SSF103473 251 422 4.19E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS06780 0caf12764d320129de38259d9e59fd7b 508 SUPERFAMILY SSF103473 472 499 4.19E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS06780 0caf12764d320129de38259d9e59fd7b 508 Gene3D G3DSA:1.20.1250.20 4 202 5.3E-36 T 28-03-2018 DDI_RS19360 023e42d777d4a94015b8c37e36afefa0 323 PIRSF PIRSF003097 22 319 9.8E-94 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 DDI_RS19360 023e42d777d4a94015b8c37e36afefa0 323 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 24 323 4.9E-129 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 DDI_RS19360 023e42d777d4a94015b8c37e36afefa0 323 Pfam PF02687 FtsX-like permease family 224 313 3.7E-6 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDI_RS13300 c716daca89d7b741570c2354650c63f2 339 SUPERFAMILY SSF51735 137 304 4.08E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS13300 c716daca89d7b741570c2354650c63f2 339 Pfam PF00107 Zinc-binding dehydrogenase 171 297 4.9E-18 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DDI_RS13300 c716daca89d7b741570c2354650c63f2 339 SUPERFAMILY SSF50129 1 170 3.04E-51 T 28-03-2018 IPR011032 GroES-like DDI_RS13300 c716daca89d7b741570c2354650c63f2 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 8.3E-33 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DDI_RS13300 c716daca89d7b741570c2354650c63f2 339 Gene3D G3DSA:3.90.180.10 1 158 2.6E-47 T 28-03-2018 DDI_RS13300 c716daca89d7b741570c2354650c63f2 339 Gene3D G3DSA:3.40.50.720 159 282 4.4E-19 T 28-03-2018 DDI_RS02190 5e441322cecdc671f160326287c09ece 332 Gene3D G3DSA:3.20.20.150 10 329 8.4E-15 T 28-03-2018 DDI_RS02190 5e441322cecdc671f160326287c09ece 332 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DDI_RS02190 5e441322cecdc671f160326287c09ece 332 Pfam PF01136 Peptidase family U32 84 331 1.0E-64 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DDI_RS07635 bc48ad20b4c1cd65f37c1a0fafffcd67 76 SUPERFAMILY SSF158651 1 75 4.32E-30 T 28-03-2018 IPR023202 YejL-like domain DDI_RS07635 bc48ad20b4c1cd65f37c1a0fafffcd67 76 Gene3D G3DSA:1.10.3390.10 2 72 3.4E-33 T 28-03-2018 IPR023202 YejL-like domain DDI_RS07635 bc48ad20b4c1cd65f37c1a0fafffcd67 76 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 70 7.0E-27 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 DDI_RS07635 bc48ad20b4c1cd65f37c1a0fafffcd67 76 Pfam PF07208 Protein of unknown function (DUF1414) 26 70 5.0E-22 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 DDI_RS07635 bc48ad20b4c1cd65f37c1a0fafffcd67 76 PIRSF PIRSF006188 1 73 1.6E-33 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 DDI_RS07635 bc48ad20b4c1cd65f37c1a0fafffcd67 76 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 72 23.587 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 DDI_RS01480 a8d6a1e3251167ad8069bda422e0c3ae 403 Pfam PF13439 Glycosyltransferase Family 4 14 219 6.2E-17 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 DDI_RS01480 a8d6a1e3251167ad8069bda422e0c3ae 403 Gene3D G3DSA:3.40.50.2000 223 383 3.2E-37 T 28-03-2018 DDI_RS01480 a8d6a1e3251167ad8069bda422e0c3ae 403 Pfam PF00534 Glycosyl transferases group 1 225 378 2.5E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 DDI_RS01480 a8d6a1e3251167ad8069bda422e0c3ae 403 Gene3D G3DSA:3.40.50.2000 1 222 7.1E-15 T 28-03-2018 DDI_RS01480 a8d6a1e3251167ad8069bda422e0c3ae 403 SUPERFAMILY SSF53756 1 400 8.07E-77 T 28-03-2018 DDI_RS19210 ab30dbad41fcdae325fd419afdaa24f3 175 Pfam PF07813 LTXXQ motif family protein 44 141 4.8E-17 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 DDI_RS19210 ab30dbad41fcdae325fd419afdaa24f3 175 PIRSF PIRSF034445 3 156 2.1E-22 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 DDI_RS08020 03c299635f849ebad095fc3eabbbf378 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 DDI_RS08020 03c299635f849ebad095fc3eabbbf378 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.0E-71 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS08020 03c299635f849ebad095fc3eabbbf378 243 Gene3D G3DSA:3.40.190.10 134 243 4.5E-20 T 28-03-2018 DDI_RS08020 03c299635f849ebad095fc3eabbbf378 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 241 6.3E-89 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 DDI_RS08020 03c299635f849ebad095fc3eabbbf378 243 SMART SM00062 22 241 3.0E-85 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS08020 03c299635f849ebad095fc3eabbbf378 243 SMART SM00079 22 243 6.1E-5 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DDI_RS08020 03c299635f849ebad095fc3eabbbf378 243 Gene3D G3DSA:3.40.190.10 16 133 9.2E-37 T 28-03-2018 DDI_RS08020 03c299635f849ebad095fc3eabbbf378 243 SUPERFAMILY SSF53850 1 242 1.52E-73 T 28-03-2018 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 641 65.739 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 Gene3D G3DSA:1.10.460.10 483 614 6.1E-18 T 28-03-2018 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 SMART SM00436 128 223 8.2E-34 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 Pfam PF01131 DNA topoisomerase 158 593 5.4E-112 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 SMART SM00493 1 124 2.5E-29 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 Pfam PF01751 Toprim domain 3 133 1.4E-17 T 28-03-2018 IPR006171 TOPRIM domain DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 Gene3D G3DSA:1.10.460.10 157 367 7.7E-40 T 28-03-2018 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 SMART SM00437 280 558 4.2E-104 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 612 4.4E-278 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 3.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 3.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 3.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 SUPERFAMILY SSF56712 1 607 1.31E-187 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 Gene3D G3DSA:2.70.20.10 368 482 1.2E-21 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DDI_RS08950 38ae1f4231ebe8b47d565f1cd2e0ca82 641 Gene3D G3DSA:3.40.50.140 1 156 2.3E-40 T 28-03-2018 DDI_RS10540 64577f131ecdd8d7b8c98e72b30c934e 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 54 1.2E-12 T 28-03-2018 DDI_RS10540 64577f131ecdd8d7b8c98e72b30c934e 73 SUPERFAMILY SSF143120 1 62 4.58E-15 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DDI_RS10540 64577f131ecdd8d7b8c98e72b30c934e 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 52 2.0E-14 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DDI_RS10540 64577f131ecdd8d7b8c98e72b30c934e 73 Gene3D G3DSA:3.40.1620.10 1 58 7.6E-20 T 28-03-2018 DDI_RS03545 7a69ac6fbf31dc471aae118c57cfbbe6 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 71 8.2E-22 T 28-03-2018 IPR010305 Protein of unknown function DUF903 DDI_RS03545 7a69ac6fbf31dc471aae118c57cfbbe6 72 Gene3D G3DSA:2.30.30.100 21 71 7.6E-20 T 28-03-2018 DDI_RS03545 7a69ac6fbf31dc471aae118c57cfbbe6 72 SUPERFAMILY SSF50182 21 71 1.36E-15 T 28-03-2018 IPR010920 LSM domain DDI_RS06210 fc85c5c71d7be700f42f7ada5be06064 351 PIRSF PIRSF038896 6 320 5.9E-88 T 28-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 DDI_RS06210 fc85c5c71d7be700f42f7ada5be06064 351 SUPERFAMILY SSF56281 69 297 4.59E-38 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS06210 fc85c5c71d7be700f42f7ada5be06064 351 Pfam PF12706 Beta-lactamase superfamily domain 86 281 3.4E-51 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS06210 fc85c5c71d7be700f42f7ada5be06064 351 Gene3D G3DSA:3.60.15.10 43 333 1.3E-53 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS13985 a739cdd4b4b6162aac27c83df0a72599 461 Pfam PF13742 OB-fold nucleic acid binding domain 10 102 1.6E-32 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DDI_RS13985 a739cdd4b4b6162aac27c83df0a72599 461 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.364 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DDI_RS13985 a739cdd4b4b6162aac27c83df0a72599 461 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.1E-100 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DDI_RS13985 a739cdd4b4b6162aac27c83df0a72599 461 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 6.5E-138 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DDI_RS13985 a739cdd4b4b6162aac27c83df0a72599 461 Gene3D G3DSA:2.40.50.140 12 104 3.6E-7 T 28-03-2018 DDI_RS04600 03cc1c570a2909f8a36fe4ab8d42fcd2 178 Pfam PF13508 Acetyltransferase (GNAT) domain 63 154 1.2E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS04600 03cc1c570a2909f8a36fe4ab8d42fcd2 178 SUPERFAMILY SSF55729 63 163 7.39E-13 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS04600 03cc1c570a2909f8a36fe4ab8d42fcd2 178 Gene3D G3DSA:3.40.630.30 14 161 5.2E-13 T 28-03-2018 DDI_RS17305 a92b5be9ab6f35be947f7cf86b15fbe7 389 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.84 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DDI_RS17305 a92b5be9ab6f35be947f7cf86b15fbe7 389 SUPERFAMILY SSF54862 169 326 3.98E-18 T 28-03-2018 DDI_RS17305 a92b5be9ab6f35be947f7cf86b15fbe7 389 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 2.6E-154 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DDI_RS17305 a92b5be9ab6f35be947f7cf86b15fbe7 389 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS17305 a92b5be9ab6f35be947f7cf86b15fbe7 389 Pfam PF13484 4Fe-4S double cluster binding domain 192 256 2.0E-18 T 28-03-2018 DDI_RS17305 a92b5be9ab6f35be947f7cf86b15fbe7 389 Gene3D G3DSA:3.30.70.20 200 306 9.0E-11 T 28-03-2018 DDI_RS17305 a92b5be9ab6f35be947f7cf86b15fbe7 389 Gene3D G3DSA:3.30.70.20 58 199 1.4E-4 T 28-03-2018 DDI_RS17305 a92b5be9ab6f35be947f7cf86b15fbe7 389 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 6.8E-24 T 28-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 DDI_RS13350 9f98231005c5660cd661a0d242fd4175 238 SUPERFAMILY SSF161098 14 208 2.35E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13350 9f98231005c5660cd661a0d242fd4175 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 222 1.7E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13350 9f98231005c5660cd661a0d242fd4175 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 117 4.1E-19 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS13350 9f98231005c5660cd661a0d242fd4175 238 Gene3D G3DSA:1.10.3720.10 2 227 5.4E-35 T 28-03-2018 DDI_RS12530 10fcdb20f829cf1c416967c6bf9db3f4 400 Gene3D G3DSA:1.20.1250.20 2 195 2.2E-27 T 28-03-2018 DDI_RS12530 10fcdb20f829cf1c416967c6bf9db3f4 400 Pfam PF07690 Major Facilitator Superfamily 20 357 7.1E-42 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS12530 10fcdb20f829cf1c416967c6bf9db3f4 400 SUPERFAMILY SSF103473 8 391 1.96E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS12530 10fcdb20f829cf1c416967c6bf9db3f4 400 PRINTS PR01035 Tetracycline resistance protein signature 106 127 5.2E-7 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS12530 10fcdb20f829cf1c416967c6bf9db3f4 400 PRINTS PR01035 Tetracycline resistance protein signature 279 300 5.2E-7 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS12530 10fcdb20f829cf1c416967c6bf9db3f4 400 PRINTS PR01035 Tetracycline resistance protein signature 22 38 5.2E-7 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDI_RS12530 10fcdb20f829cf1c416967c6bf9db3f4 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 391 3.0E-89 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 DDI_RS12530 10fcdb20f829cf1c416967c6bf9db3f4 400 Gene3D G3DSA:1.20.1250.20 200 394 6.4E-20 T 28-03-2018 DDI_RS17415 8385484e19092d971e2951b4ca484e60 279 SUPERFAMILY SSF53850 7 255 3.36E-53 T 28-03-2018 DDI_RS17415 8385484e19092d971e2951b4ca484e60 279 Gene3D G3DSA:3.40.190.10 24 175 1.4E-35 T 28-03-2018 DDI_RS17415 8385484e19092d971e2951b4ca484e60 279 Gene3D G3DSA:3.40.190.10 176 254 2.8E-6 T 28-03-2018 DDI_RS17415 8385484e19092d971e2951b4ca484e60 279 SMART SM00062 35 256 4.3E-46 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS17415 8385484e19092d971e2951b4ca484e60 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 254 1.5E-48 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS14635 cb6e008e7c7d5c768d23c215cc9d567f 240 Pfam PF08241 Methyltransferase domain 74 125 2.7E-8 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 DDI_RS14635 cb6e008e7c7d5c768d23c215cc9d567f 240 SUPERFAMILY SSF53335 63 183 5.09E-14 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS14635 cb6e008e7c7d5c768d23c215cc9d567f 240 Gene3D G3DSA:3.40.50.150 54 210 1.3E-12 T 28-03-2018 DDI_RS15950 9d190ab65084f0c7c25da9998e16040a 350 Gene3D G3DSA:3.40.190.10 1 160 3.4E-12 T 28-03-2018 DDI_RS15950 9d190ab65084f0c7c25da9998e16040a 350 Gene3D G3DSA:3.40.190.10 161 323 6.5E-18 T 28-03-2018 DDI_RS15950 9d190ab65084f0c7c25da9998e16040a 350 Pfam PF13343 Bacterial extracellular solute-binding protein 86 318 1.1E-32 T 28-03-2018 DDI_RS15950 9d190ab65084f0c7c25da9998e16040a 350 SUPERFAMILY SSF53850 34 342 3.26E-45 T 28-03-2018 DDI_RS14135 6f0f4284a0dc5896a5c566b5839038e1 220 PIRSF PIRSF008159 6 220 1.4E-73 T 28-03-2018 IPR016537 Uncharacterised conserved protein UCP008159, DDI_RS14135 6f0f4284a0dc5896a5c566b5839038e1 220 Pfam PF06226 Protein of unknown function (DUF1007) 17 219 7.4E-64 T 28-03-2018 IPR010412 Protein of unknown function DUF1007 DDI_RS18045 406526c7d2b72a4302ddbf2b2ae5f881 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.39 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DDI_RS18045 406526c7d2b72a4302ddbf2b2ae5f881 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 8.0E-60 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DDI_RS18045 406526c7d2b72a4302ddbf2b2ae5f881 123 SMART SM01374 1 123 1.4E-85 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DDI_RS18045 406526c7d2b72a4302ddbf2b2ae5f881 123 SUPERFAMILY SSF50193 2 122 5.36E-51 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DDI_RS18045 406526c7d2b72a4302ddbf2b2ae5f881 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18045 406526c7d2b72a4302ddbf2b2ae5f881 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.0E-54 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DDI_RS18045 406526c7d2b72a4302ddbf2b2ae5f881 123 Gene3D G3DSA:2.40.150.20 1 123 4.9E-53 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DDI_RS13490 e4b178310ebb9c681535a68646500706 456 Gene3D G3DSA:3.30.1330.90 10 159 4.1E-50 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 DDI_RS13490 e4b178310ebb9c681535a68646500706 456 Pfam PF03313 Serine dehydratase alpha chain 187 449 2.0E-93 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit DDI_RS13490 e4b178310ebb9c681535a68646500706 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 452 4.6E-217 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DDI_RS13490 e4b178310ebb9c681535a68646500706 456 Pfam PF03315 Serine dehydratase beta chain 3 156 1.2E-54 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DDI_RS13490 e4b178310ebb9c681535a68646500706 456 SUPERFAMILY SSF143548 16 159 5.23E-45 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 DDI_RS13490 e4b178310ebb9c681535a68646500706 456 Gene3D G3DSA:1.10.4100.10 246 445 1.8E-34 T 28-03-2018 DDI_RS20510 46a00a5f14caf488ec0ecac979f1a5cf 83 SUPERFAMILY SSF159871 4 83 1.28E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS20510 46a00a5f14caf488ec0ecac979f1a5cf 83 Pfam PF07338 Protein of unknown function (DUF1471) 33 83 6.9E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS20510 46a00a5f14caf488ec0ecac979f1a5cf 83 Gene3D G3DSA:3.30.1660.10 26 82 6.0E-17 T 28-03-2018 IPR025543 Dodecin-like DDI_RS08985 cbbbb1ff7379324781ad81bc50d46416 300 Pfam PF01734 Patatin-like phospholipase 8 165 7.4E-22 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DDI_RS08985 cbbbb1ff7379324781ad81bc50d46416 300 SUPERFAMILY SSF52151 1 292 2.28E-58 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS08985 cbbbb1ff7379324781ad81bc50d46416 300 Gene3D G3DSA:3.40.1090.10 2 253 5.8E-40 T 28-03-2018 DDI_RS15035 79a62872cb2f3ff379f7cb04d2c7a0d6 95 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 1 87 1.5E-20 T 28-03-2018 IPR010152 CRISPR-associated protein Cas2 subtype DDI_RS15035 79a62872cb2f3ff379f7cb04d2c7a0d6 95 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 1 87 1.2E-28 T 28-03-2018 IPR010152 CRISPR-associated protein Cas2 subtype DDI_RS08375 c39467ad8aa0ee89d56352e90675a478 298 SUPERFAMILY SSF56112 14 271 1.47E-18 T 28-03-2018 IPR011009 Protein kinase-like domain DDI_RS08375 c39467ad8aa0ee89d56352e90675a478 298 Gene3D G3DSA:3.90.1200.10 85 285 1.2E-8 T 28-03-2018 DDI_RS08375 c39467ad8aa0ee89d56352e90675a478 298 Pfam PF01636 Phosphotransferase enzyme family 62 238 5.5E-9 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase DDI_RS06915 15085e7e9eb7b13663e08e1c8546a9b5 227 SUPERFAMILY SSF54427 85 223 1.62E-31 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS06915 15085e7e9eb7b13663e08e1c8546a9b5 227 Pfam PF04335 VirB8 protein 12 223 5.2E-50 T 28-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 DDI_RS12720 254dc4ada21643b0355c11d6b64b1127 148 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 8.9E-32 T 28-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12720 254dc4ada21643b0355c11d6b64b1127 148 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.994 T 28-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 DDI_RS16120 967c288acf9002817e20c7ca7c2f9eaf 155 SUPERFAMILY SSF143749 1 136 8.89E-55 T 28-03-2018 IPR009312 Minor tail protein U-like DDI_RS16120 967c288acf9002817e20c7ca7c2f9eaf 155 Gene3D G3DSA:3.30.2000.10 1 135 1.2E-40 T 28-03-2018 DDI_RS16120 967c288acf9002817e20c7ca7c2f9eaf 155 Pfam PF09646 Gp37 protein 10 151 6.9E-59 T 28-03-2018 IPR018602 Gp37/putative cytoplasmic protein STM4215 DDI_RS05095 6480cfa37d9148a79275ef1551e9bc9e 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 6.2E-28 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05095 6480cfa37d9148a79275ef1551e9bc9e 129 PIRSF PIRSF000178 3 129 1.7E-31 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05095 6480cfa37d9148a79275ef1551e9bc9e 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05095 6480cfa37d9148a79275ef1551e9bc9e 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05095 6480cfa37d9148a79275ef1551e9bc9e 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 1.5E-37 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS05095 6480cfa37d9148a79275ef1551e9bc9e 129 Gene3D G3DSA:1.20.1300.10 3 129 1.8E-24 T 28-03-2018 DDI_RS05095 6480cfa37d9148a79275ef1551e9bc9e 129 SUPERFAMILY SSF81343 3 129 5.56E-34 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS20355 b8b154e0d39dafbc7794bdd87639a0a1 250 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 39.488 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DDI_RS20355 b8b154e0d39dafbc7794bdd87639a0a1 250 Gene3D G3DSA:3.40.50.150 57 249 8.6E-37 T 28-03-2018 DDI_RS20355 b8b154e0d39dafbc7794bdd87639a0a1 250 SUPERFAMILY SSF53335 6 246 4.9E-76 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS20355 b8b154e0d39dafbc7794bdd87639a0a1 250 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 7.0E-108 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DDI_RS20355 b8b154e0d39dafbc7794bdd87639a0a1 250 Gene3D G3DSA:3.40.1630.10 3 55 5.8E-19 T 28-03-2018 DDI_RS20860 aa972113b14c406524c76ada4f4b2c8d 81 Pfam PF07338 Protein of unknown function (DUF1471) 31 81 1.1E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS20860 aa972113b14c406524c76ada4f4b2c8d 81 Gene3D G3DSA:3.30.1660.10 20 81 2.4E-17 T 28-03-2018 IPR025543 Dodecin-like DDI_RS20860 aa972113b14c406524c76ada4f4b2c8d 81 SUPERFAMILY SSF159871 1 81 5.49E-22 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 SMART SM00382 356 538 9.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 SMART SM00382 34 308 6.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 Pfam PF00005 ABC transporter 348 491 5.8E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 Pfam PF00005 ABC transporter 26 167 1.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 SUPERFAMILY SSF52540 330 551 1.78E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 Gene3D G3DSA:3.40.50.300 328 581 8.1E-63 T 28-03-2018 DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 Gene3D G3DSA:3.40.50.300 5 263 2.0E-54 T 28-03-2018 DDI_RS07235 f3909068c26acbfabb9b1c6604a3d241 583 SUPERFAMILY SSF52540 6 230 1.78E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04430 da71a4dcd623154fb91880134b90d1cd 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 1.9E-35 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDI_RS04430 da71a4dcd623154fb91880134b90d1cd 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.1E-40 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDI_RS04430 da71a4dcd623154fb91880134b90d1cd 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.361 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDI_RS04430 da71a4dcd623154fb91880134b90d1cd 109 PIRSF PIRSF004555 3 109 4.7E-38 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDI_RS04430 da71a4dcd623154fb91880134b90d1cd 109 Gene3D G3DSA:3.30.1310.10 1 109 2.0E-45 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDI_RS04430 da71a4dcd623154fb91880134b90d1cd 109 SUPERFAMILY SSF82607 11 103 1.31E-35 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDI_RS12675 5dce25071f45c85038b9df856aa694b2 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.871 T 28-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 DDI_RS12675 5dce25071f45c85038b9df856aa694b2 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 7.6E-22 T 28-03-2018 DDI_RS18695 522a3ae48ba4a58279257339dfe44e0d 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 2.3E-102 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDI_RS18695 522a3ae48ba4a58279257339dfe44e0d 274 SUPERFAMILY SSF54506 2 272 2.53E-56 T 28-03-2018 DDI_RS18695 522a3ae48ba4a58279257339dfe44e0d 274 Gene3D G3DSA:3.10.310.10 125 261 1.3E-50 T 28-03-2018 DDI_RS18695 522a3ae48ba4a58279257339dfe44e0d 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.298 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDI_RS18695 522a3ae48ba4a58279257339dfe44e0d 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 28-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDI_RS18695 522a3ae48ba4a58279257339dfe44e0d 274 Gene3D G3DSA:3.10.310.10 1 124 6.3E-48 T 28-03-2018 DDI_RS18695 522a3ae48ba4a58279257339dfe44e0d 274 Pfam PF01678 Diaminopimelate epimerase 152 267 3.7E-32 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDI_RS18695 522a3ae48ba4a58279257339dfe44e0d 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.7E-34 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 SMART SM00382 36 224 1.5E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 SMART SM00382 287 489 0.46 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 Gene3D G3DSA:3.40.50.300 268 496 6.4E-39 T 28-03-2018 DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 Pfam PF00005 ABC transporter 281 432 2.1E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 Pfam PF00005 ABC transporter 27 176 6.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 SUPERFAMILY SSF52540 11 233 5.86E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 Gene3D G3DSA:3.40.50.300 8 265 3.6E-54 T 28-03-2018 DDI_RS14870 f3b35fd90462beb3191b77fa72f4e34f 502 SUPERFAMILY SSF52540 270 491 9.2E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08500 3fffd34b122f2d72c239b319be5b2f8d 401 SUPERFAMILY SSF103473 13 389 1.1E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS08500 3fffd34b122f2d72c239b319be5b2f8d 401 Gene3D G3DSA:1.20.1250.20 198 397 3.6E-20 T 28-03-2018 DDI_RS08500 3fffd34b122f2d72c239b319be5b2f8d 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 39.317 T 28-03-2018 IPR022855 Multidrug resistance protein MdtH DDI_RS08500 3fffd34b122f2d72c239b319be5b2f8d 401 Gene3D G3DSA:1.20.1250.20 12 195 6.6E-26 T 28-03-2018 DDI_RS08500 3fffd34b122f2d72c239b319be5b2f8d 401 Pfam PF07690 Major Facilitator Superfamily 20 232 1.0E-22 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS13725 027b64680ea45979abcaf239035cc1c0 222 Gene3D G3DSA:1.10.3720.10 1 222 6.1E-35 T 28-03-2018 DDI_RS13725 027b64680ea45979abcaf239035cc1c0 222 SUPERFAMILY SSF161098 18 213 1.05E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS13725 027b64680ea45979abcaf239035cc1c0 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 111 2.1E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS13725 027b64680ea45979abcaf239035cc1c0 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 218 1.0E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00025 28190a5464fa0861013498502c66a017 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 110 2.2E-32 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS00025 28190a5464fa0861013498502c66a017 221 Gene3D G3DSA:1.10.3720.10 2 221 1.7E-37 T 28-03-2018 DDI_RS00025 28190a5464fa0861013498502c66a017 221 SUPERFAMILY SSF161098 13 201 9.29E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00025 28190a5464fa0861013498502c66a017 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 213 2.8E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS11445 0fe13cdbbb955cb1f7b04bc4505e65c4 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 1.3E-72 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DDI_RS11445 0fe13cdbbb955cb1f7b04bc4505e65c4 273 Gene3D G3DSA:3.40.50.300 29 271 0.0011 T 28-03-2018 DDI_RS11445 0fe13cdbbb955cb1f7b04bc4505e65c4 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 71.077 T 28-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein DDI_RS09750 90d95f6303a984fe21f9226a01446a6d 416 Pfam PF01266 FAD dependent oxidoreductase 2 397 2.3E-73 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDI_RS09750 90d95f6303a984fe21f9226a01446a6d 416 Gene3D G3DSA:3.50.50.60 1 416 7.3E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS09750 90d95f6303a984fe21f9226a01446a6d 416 SUPERFAMILY SSF54373 269 359 6.41E-18 T 28-03-2018 DDI_RS09750 90d95f6303a984fe21f9226a01446a6d 416 SUPERFAMILY SSF51905 107 271 3.88E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS09750 90d95f6303a984fe21f9226a01446a6d 416 SUPERFAMILY SSF51905 1 54 3.88E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS09750 90d95f6303a984fe21f9226a01446a6d 416 SUPERFAMILY SSF51905 359 415 3.88E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS09750 90d95f6303a984fe21f9226a01446a6d 416 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 51.769 T 28-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 DDI_RS11375 38a699ecd22fc465624d60599bccc5bc 78 Gene3D G3DSA:1.20.5.190 22 72 1.1E-14 T 28-03-2018 DDI_RS11375 38a699ecd22fc465624d60599bccc5bc 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 1.0E-23 T 28-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 DDI_RS11375 38a699ecd22fc465624d60599bccc5bc 78 PIRSF PIRSF002855 1 78 8.3E-29 T 28-03-2018 IPR016367 Murein-lipoprotein DDI_RS11375 38a699ecd22fc465624d60599bccc5bc 78 SUPERFAMILY SSF58042 22 77 4.97E-19 T 28-03-2018 DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 Gene3D G3DSA:3.40.50.300 285 552 1.8E-63 T 28-03-2018 DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 Gene3D G3DSA:3.40.50.300 12 282 6.8E-63 T 28-03-2018 DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 SUPERFAMILY SSF52540 17 266 5.32E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 SMART SM00382 327 525 5.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 SMART SM00382 45 244 1.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 278 5.8E-5 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 519 547 0.0011 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 Pfam PF00005 ABC transporter 319 468 3.9E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 Pfam PF00005 ABC transporter 36 194 5.4E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 SUPERFAMILY SSF52540 305 539 3.82E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14950 89d50b6c830dfcc453c1c25de34623fb 558 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS12500 c38969f1ba8bae828d6dfed23da01b18 429 Gene3D G3DSA:3.40.190.10 170 380 1.6E-38 T 28-03-2018 DDI_RS12500 c38969f1ba8bae828d6dfed23da01b18 429 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 18 44 1.8E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DDI_RS12500 c38969f1ba8bae828d6dfed23da01b18 429 SUPERFAMILY SSF53850 52 287 1.15E-31 T 28-03-2018 DDI_RS12500 c38969f1ba8bae828d6dfed23da01b18 429 Pfam PF13379 NMT1-like family 48 299 2.1E-104 T 28-03-2018 DDI_RS12500 c38969f1ba8bae828d6dfed23da01b18 429 Gene3D G3DSA:3.40.190.10 49 169 5.8E-10 T 28-03-2018 DDI_RS12500 c38969f1ba8bae828d6dfed23da01b18 429 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 17 38 1.4E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DDI_RS12120 ee5bae1492b403ab3da974033fd3c880 145 Gene3D G3DSA:1.20.58.300 1 119 3.1E-17 T 28-03-2018 DDI_RS12120 ee5bae1492b403ab3da974033fd3c880 145 Pfam PF05130 FlgN protein 1 134 1.8E-22 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 DDI_RS12120 ee5bae1492b403ab3da974033fd3c880 145 SUPERFAMILY SSF140566 1 118 3.53E-14 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 SMART SM00354 1 73 7.4E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 Gene3D G3DSA:3.40.50.2300 57 169 1.2E-25 T 28-03-2018 DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 SUPERFAMILY SSF53822 60 314 2.75E-41 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 9.1E-16 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 28-03-2018 DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 Gene3D G3DSA:1.10.260.40 1 56 7.6E-20 T 28-03-2018 DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 3.8E-149 T 28-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 DDI_RS16780 b1eaa01b6580f2dfc842de17ee0e91cc 334 Gene3D G3DSA:3.40.50.2300 170 329 7.1E-20 T 28-03-2018 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 SUPERFAMILY SSF118215 8 412 9.55E-124 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 1.9E-49 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.9E-49 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.9E-49 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 1.9E-49 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 1.9E-49 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 1.9E-49 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.9E-49 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 1.9E-49 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 Gene3D G3DSA:1.10.3860.10 1 418 1.1E-126 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 45.02 T 28-03-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DDI_RS05930 cc9e0ceb0dcbf9cc4ea7c1b0542feeec 438 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 7.2E-118 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS01965 d0c8d1f3e6f20a092fdae0cdf931116a 171 Pfam PF04985 Phage tail tube protein FII 4 170 1.3E-66 T 28-03-2018 IPR006498 Tail tube protein DDI_RS01965 d0c8d1f3e6f20a092fdae0cdf931116a 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 5.9E-55 T 28-03-2018 IPR006498 Tail tube protein DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 Pfam PF00375 Sodium:dicarboxylate symporter family 30 442 9.1E-105 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 SUPERFAMILY SSF118215 29 442 7.45E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 Gene3D G3DSA:1.10.3860.10 23 450 3.9E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 3.4E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 3.4E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 3.4E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 3.4E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 3.4E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS09965 a4c8aef0c275d4e49b5b95a42caf9d79 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 3.4E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDI_RS05975 5f9f475032cef4ca8c8a67bae2bf655f 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 4.1E-147 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDI_RS05975 5f9f475032cef4ca8c8a67bae2bf655f 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 4.2E-195 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDI_RS05975 5f9f475032cef4ca8c8a67bae2bf655f 446 PIRSF PIRSF004539 1 444 3.2E-194 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDI_RS10060 afd8e272d804315d57cf216c93ed6345 152 Gene3D G3DSA:3.90.79.10 1 147 5.3E-30 T 28-03-2018 DDI_RS10060 afd8e272d804315d57cf216c93ed6345 152 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.3E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDI_RS10060 afd8e272d804315d57cf216c93ed6345 152 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.3E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDI_RS10060 afd8e272d804315d57cf216c93ed6345 152 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDI_RS10060 afd8e272d804315d57cf216c93ed6345 152 SUPERFAMILY SSF55811 2 133 5.28E-27 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS10060 afd8e272d804315d57cf216c93ed6345 152 Pfam PF00293 NUDIX domain 4 112 1.9E-16 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS05530 046a46d9fb643e080596bebf2e841186 363 Gene3D G3DSA:3.40.50.300 5 333 4.8E-74 T 28-03-2018 DDI_RS05530 046a46d9fb643e080596bebf2e841186 363 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS05530 046a46d9fb643e080596bebf2e841186 363 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 320 5.0E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS05530 046a46d9fb643e080596bebf2e841186 363 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 302 5.3E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS05530 046a46d9fb643e080596bebf2e841186 363 SUPERFAMILY SSF52540 20 256 3.66E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05530 046a46d9fb643e080596bebf2e841186 363 Pfam PF00005 ABC transporter 35 185 6.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS05530 046a46d9fb643e080596bebf2e841186 363 SMART SM00382 43 235 1.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07760 0c2d7dc673761a303eea41cf0f6136d1 360 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 21 359 1.2E-105 T 28-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 DDI_RS07760 0c2d7dc673761a303eea41cf0f6136d1 360 Pfam PF03601 Conserved hypothetical protein 698 25 337 2.2E-98 T 28-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 DDI_RS00115 af08d36446441f3a69359419bf69c3d0 333 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 5 333 54.899 T 28-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 DDI_RS00115 af08d36446441f3a69359419bf69c3d0 333 Gene3D G3DSA:3.90.420.10 64 333 2.4E-61 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DDI_RS00115 af08d36446441f3a69359419bf69c3d0 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 266 3.0E-30 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DDI_RS00115 af08d36446441f3a69359419bf69c3d0 333 SUPERFAMILY SSF56524 71 329 4.97E-93 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 9.9E-6 T 28-03-2018 DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 SUPERFAMILY SSF51735 4 243 7.96E-85 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.7E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.7E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.7E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.7E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.7E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.7E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 3.5E-66 T 28-03-2018 DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 Gene3D G3DSA:3.40.50.720 46 244 2.5E-65 T 28-03-2018 DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 Gene3D G3DSA:3.40.50.720 1 45 4.8E-10 T 28-03-2018 DDI_RS11755 d92b47e6548c6081c463c9f08b50a001 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.1E-98 T 28-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS11390 c1c47a9b3605c59725997f94aa640c4a 417 Hamap MF_01831 Cysteine desulfurase [sufS]. 11 416 76.303 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 DDI_RS11390 c1c47a9b3605c59725997f94aa640c4a 417 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 17 415 1.2E-180 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 DDI_RS11390 c1c47a9b3605c59725997f94aa640c4a 417 SUPERFAMILY SSF53383 14 412 2.48E-123 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS11390 c1c47a9b3605c59725997f94aa640c4a 417 Pfam PF00266 Aminotransferase class-V 36 404 2.2E-154 T 28-03-2018 IPR000192 Aminotransferase class V domain DDI_RS11390 c1c47a9b3605c59725997f94aa640c4a 417 Gene3D G3DSA:3.90.1150.10 294 411 3.3E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS11390 c1c47a9b3605c59725997f94aa640c4a 417 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 227 246 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DDI_RS11390 c1c47a9b3605c59725997f94aa640c4a 417 Gene3D G3DSA:3.40.640.10 47 293 2.2E-59 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 Gene3D G3DSA:3.40.1380.10 42 239 4.4E-74 T 28-03-2018 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 Gene3D G3DSA:1.10.287.80 240 282 1.3E-14 T 28-03-2018 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 Gene3D G3DSA:1.10.287.80 2 41 5.7E-18 T 28-03-2018 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 SUPERFAMILY SSF52943 2 287 7.46E-97 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 Pfam PF00231 ATP synthase 5 286 3.8E-96 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 28-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 5.0E-111 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.5E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.5E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.5E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.5E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS20010 57009cf96ed9085ce8e4bc7c166b60e5 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.39 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDI_RS18550 7b526a1a40c43aa6d39d82d48cea0049 561 SUPERFAMILY SSF55781 236 365 9.81E-8 T 28-03-2018 IPR029016 GAF domain-like DDI_RS18550 7b526a1a40c43aa6d39d82d48cea0049 561 Gene3D G3DSA:3.30.450.40 199 381 2.4E-5 T 28-03-2018 IPR029016 GAF domain-like DDI_RS18550 7b526a1a40c43aa6d39d82d48cea0049 561 SUPERFAMILY SSF55874 425 558 3.97E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18550 7b526a1a40c43aa6d39d82d48cea0049 561 Gene3D G3DSA:3.30.565.10 383 559 3.6E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain DDI_RS18550 7b526a1a40c43aa6d39d82d48cea0049 561 Pfam PF06580 Histidine kinase 372 446 9.7E-25 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DDI_RS18550 7b526a1a40c43aa6d39d82d48cea0049 561 SMART SM00065 219 366 0.0061 T 28-03-2018 IPR003018 GAF domain GO:0005515 DDI_RS18550 7b526a1a40c43aa6d39d82d48cea0049 561 Pfam PF07694 5TMR of 5TMR-LYT 29 197 3.8E-58 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DDI_RS00255 314819e255614be175eecf1609e564e3 328 Gene3D G3DSA:3.40.50.10490 11 202 1.9E-54 T 28-03-2018 DDI_RS00255 314819e255614be175eecf1609e564e3 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 1.1E-121 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DDI_RS00255 314819e255614be175eecf1609e564e3 328 Gene3D G3DSA:3.10.580.10 203 328 1.7E-19 T 28-03-2018 DDI_RS00255 314819e255614be175eecf1609e564e3 328 Pfam PF01380 SIS domain 45 177 6.3E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS00255 314819e255614be175eecf1609e564e3 328 PIRSF PIRSF004692 2 328 4.1E-133 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DDI_RS00255 314819e255614be175eecf1609e564e3 328 SUPERFAMILY SSF53697 16 326 2.45E-68 T 28-03-2018 DDI_RS00255 314819e255614be175eecf1609e564e3 328 Pfam PF00571 CBS domain 208 261 7.6E-5 T 28-03-2018 IPR000644 CBS domain DDI_RS00255 314819e255614be175eecf1609e564e3 328 Pfam PF00571 CBS domain 274 325 1.5E-7 T 28-03-2018 IPR000644 CBS domain DDI_RS09285 0bc560b8c24dd8083c1e584627247273 520 Pfam PF06097 Bacterial protein of unknown function (DUF945) 3 483 8.9E-120 T 28-03-2018 IPR010352 Protein of unknown function DUF945 DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 SUPERFAMILY SSF46906 68 141 5.76E-26 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 28-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 28-03-2018 DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.317 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 SMART SM00649 9 141 6.0E-83 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.0E-28 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 2.2E-64 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 Gene3D G3DSA:3.30.1550.10 3 72 8.7E-34 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 SUPERFAMILY SSF54747 3 73 1.7E-29 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal DDI_RS21435 72e54747f3568512fb5119f7a1fc906e 142 Gene3D G3DSA:1.10.10.250 73 141 1.2E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DDI_RS03875 d5ad86deec56a193f6ffa795d8d4cf55 281 SUPERFAMILY SSF46689 234 281 1.0E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS03875 d5ad86deec56a193f6ffa795d8d4cf55 281 Gene3D G3DSA:1.10.10.60 181 234 0.012 T 28-03-2018 DDI_RS03875 d5ad86deec56a193f6ffa795d8d4cf55 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS03875 d5ad86deec56a193f6ffa795d8d4cf55 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDI_RS03875 d5ad86deec56a193f6ffa795d8d4cf55 281 SMART SM00342 198 280 3.0E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS03875 d5ad86deec56a193f6ffa795d8d4cf55 281 Gene3D G3DSA:1.10.10.60 235 281 7.0E-12 T 28-03-2018 DDI_RS03875 d5ad86deec56a193f6ffa795d8d4cf55 281 Pfam PF12833 Helix-turn-helix domain 204 281 1.5E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDI_RS06790 246328d748433b1b2122618cd809a383 161 Pfam PF10696 Protein of unknown function (DUF2501) 80 159 1.9E-27 T 28-03-2018 IPR019637 Protein of unknown function DUF2501 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 SUPERFAMILY SSF53067 327 446 1.4E-28 T 28-03-2018 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 SUPERFAMILY SSF53067 207 274 1.4E-28 T 28-03-2018 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 212 225 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 Pfam PF00012 Hsp70 protein 3 227 1.7E-12 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 Pfam PF00012 Hsp70 protein 331 426 1.2E-4 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 Gene3D G3DSA:3.30.420.40 1 215 1.1E-32 T 28-03-2018 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 Gene3D G3DSA:3.30.420.40 216 428 1.9E-29 T 28-03-2018 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 SUPERFAMILY SSF53067 1 44 1.55E-24 T 28-03-2018 DDI_RS11640 2ee095fb355b69d1ee72e53515387598 449 SUPERFAMILY SSF53067 84 203 1.55E-24 T 28-03-2018 DDI_RS18805 4918ccd462145571a170db13bc9c15a4 250 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 71 235 6.8E-50 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 DDI_RS18805 4918ccd462145571a170db13bc9c15a4 250 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 250 61.708 T 28-03-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 DDI_RS18805 4918ccd462145571a170db13bc9c15a4 250 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 66 241 3.7E-65 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 DDI_RS06975 4037f5de27b1b0e2c9b7e4a0c62e9e48 64 Gene3D G3DSA:1.10.10.10 6 63 3.7E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06975 4037f5de27b1b0e2c9b7e4a0c62e9e48 64 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 54 7.8E-25 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA DDI_RS04735 13d28fceaf9b109412d2408f8c7cd449 346 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 39.472 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC DDI_RS04735 13d28fceaf9b109412d2408f8c7cd449 346 PIRSF PIRSF026343 9 346 1.0E-116 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC DDI_RS04735 13d28fceaf9b109412d2408f8c7cd449 346 Pfam PF06804 NlpB/DapX lipoprotein 40 343 1.8E-111 T 28-03-2018 IPR010653 NlpB/DapX lipoprotein DDI_RS18710 14f22070f2eb67d46628d81e17f8c0f1 852 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 28-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 DDI_RS18710 14f22070f2eb67d46628d81e17f8c0f1 852 Pfam PF01295 Adenylate cyclase, class-I 228 825 8.8E-260 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 DDI_RS18710 14f22070f2eb67d46628d81e17f8c0f1 852 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 28-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 DDI_RS18710 14f22070f2eb67d46628d81e17f8c0f1 852 PIRSF PIRSF001444 1 850 0.0 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 DDI_RS18710 14f22070f2eb67d46628d81e17f8c0f1 852 Pfam PF12633 Adenylate cyclase NT domain 5 200 3.2E-81 T 28-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 DDI_RS06440 d7232352acb0af6f1d3b0ea651ee7cb6 306 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 74 5.8E-8 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS06440 d7232352acb0af6f1d3b0ea651ee7cb6 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 303 1.1E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06440 d7232352acb0af6f1d3b0ea651ee7cb6 306 SUPERFAMILY SSF161098 99 290 4.71E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06440 d7232352acb0af6f1d3b0ea651ee7cb6 306 Gene3D G3DSA:1.10.3720.10 28 294 5.4E-43 T 28-03-2018 DDI_RS08360 be1680cd6d1e1e756be595a1c77693c4 250 SUPERFAMILY SSF53448 3 246 1.22E-66 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS08360 be1680cd6d1e1e756be595a1c77693c4 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 6.0E-124 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DDI_RS08360 be1680cd6d1e1e756be595a1c77693c4 250 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.742 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DDI_RS08360 be1680cd6d1e1e756be595a1c77693c4 250 Gene3D G3DSA:3.90.550.10 1 250 3.5E-51 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS08360 be1680cd6d1e1e756be595a1c77693c4 250 Pfam PF02348 Cytidylyltransferase 5 221 2.2E-67 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 37.764 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 6.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 6.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 6.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 6.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 6.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 6.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 Gene3D G3DSA:3.40.50.1370 147 292 1.0E-45 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 Gene3D G3DSA:3.40.50.1370 1 146 6.5E-51 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 SUPERFAMILY SSF53671 4 306 1.83E-100 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 7.6E-117 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.3E-46 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.7E-28 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.6E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 3.6E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 3.6E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS00695 cbacb98eed7c5374737f7409770930e2 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 3.6E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDI_RS18000 0b4068a19eb8922b559603fab23dc515 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 7.3E-31 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P DDI_RS18000 0b4068a19eb8922b559603fab23dc515 144 Gene3D G3DSA:3.100.10.10 42 144 8.0E-26 T 28-03-2018 DDI_RS18000 0b4068a19eb8922b559603fab23dc515 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.933 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DDI_RS18000 0b4068a19eb8922b559603fab23dc515 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 28-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18000 0b4068a19eb8922b559603fab23dc515 144 SUPERFAMILY SSF52080 4 143 2.09E-46 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P DDI_RS18000 0b4068a19eb8922b559603fab23dc515 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.0E-50 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS17980 cd2ade55df70dfcee4574b32401de264 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.8E-55 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS17980 cd2ade55df70dfcee4574b32401de264 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.772 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DDI_RS17980 cd2ade55df70dfcee4574b32401de264 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DDI_RS17980 cd2ade55df70dfcee4574b32401de264 129 SUPERFAMILY SSF53137 14 129 3.79E-48 T 28-03-2018 DDI_RS17980 cd2ade55df70dfcee4574b32401de264 129 Gene3D G3DSA:3.30.420.80 5 129 4.1E-45 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DDI_RS17980 cd2ade55df70dfcee4574b32401de264 129 PIRSF PIRSF002131 1 129 5.9E-53 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DDI_RS17980 cd2ade55df70dfcee4574b32401de264 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site DDI_RS17230 13fa0cb805105d256e942b3ebeeff074 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.211 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 DDI_RS17230 13fa0cb805105d256e942b3ebeeff074 187 Gene3D G3DSA:3.40.1740.10 103 179 2.7E-11 T 28-03-2018 DDI_RS17230 13fa0cb805105d256e942b3ebeeff074 187 Gene3D G3DSA:3.40.1740.10 1 95 6.4E-29 T 28-03-2018 DDI_RS17230 13fa0cb805105d256e942b3ebeeff074 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.5E-49 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 DDI_RS17230 13fa0cb805105d256e942b3ebeeff074 187 SUPERFAMILY SSF143456 1 187 8.5E-65 T 28-03-2018 DDI_RS21280 d61f78088b922bfc20208e92cd5ebef4 255 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 2.1E-64 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDI_RS21280 d61f78088b922bfc20208e92cd5ebef4 255 ProSitePatterns PS01218 TatC family signature. 154 173 - T 28-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site DDI_RS21280 d61f78088b922bfc20208e92cd5ebef4 255 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 2.2E-77 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDI_RS21280 d61f78088b922bfc20208e92cd5ebef4 255 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.4E-49 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDI_RS21280 d61f78088b922bfc20208e92cd5ebef4 255 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.4E-49 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDI_RS21280 d61f78088b922bfc20208e92cd5ebef4 255 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.4E-49 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDI_RS21280 d61f78088b922bfc20208e92cd5ebef4 255 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.4E-49 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDI_RS21280 d61f78088b922bfc20208e92cd5ebef4 255 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 242 18.199 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDI_RS00900 f64bd3d3802e4b014e132f9359c902d3 90 SUPERFAMILY SSF47598 6 83 6.67E-21 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS00900 f64bd3d3802e4b014e132f9359c902d3 90 Pfam PF08681 Protein of unknown function (DUF1778) 10 85 1.5E-22 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 DDI_RS00900 f64bd3d3802e4b014e132f9359c902d3 90 Gene3D G3DSA:1.20.5.780 6 85 6.2E-26 T 28-03-2018 DDI_RS04985 0161fee4049ff22be095b97f7f08aece 148 Gene3D G3DSA:1.10.10.10 4 88 6.2E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS04985 0161fee4049ff22be095b97f7f08aece 148 Pfam PF01475 Ferric uptake regulator family 10 130 6.2E-48 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DDI_RS04985 0161fee4049ff22be095b97f7f08aece 148 SUPERFAMILY SSF46785 6 134 5.54E-44 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.4E-63 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 PRINTS PR01576 Peptide deformylase signature 33 62 5.4E-38 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 PRINTS PR01576 Peptide deformylase signature 120 149 5.4E-38 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 PRINTS PR01576 Peptide deformylase signature 101 119 5.4E-38 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 PRINTS PR01576 Peptide deformylase signature 89 100 5.4E-38 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.655 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 PIRSF PIRSF004749 1 169 1.2E-54 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 Pfam PF01327 Polypeptide deformylase 4 152 8.3E-50 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 Gene3D G3DSA:3.90.45.10 1 169 2.8E-62 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS17930 2f34ed5b733edad925d95ebbfd0a63b9 169 SUPERFAMILY SSF56420 3 164 6.15E-61 T 28-03-2018 IPR023635 Peptide deformylase DDI_RS08560 f18787d30d9270320eb36bad8f1de183 226 Gene3D G3DSA:3.10.350.10 167 223 6.1E-4 T 28-03-2018 DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 Pfam PF12795 Mechanosensitive ion channel porin domain 32 259 3.5E-56 T 28-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 482 818 9.3E-109 T 28-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 951 985 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 SUPERFAMILY SSF82861 838 920 1.44E-7 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 Gene3D G3DSA:2.30.30.60 937 986 2.9E-12 T 28-03-2018 DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 Gene3D G3DSA:1.20.5.110 199 722 7.7E-6 T 28-03-2018 DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 SUPERFAMILY SSF82689 989 1087 1.57E-14 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 Gene3D G3DSA:3.30.70.100 989 1083 1.7E-9 T 28-03-2018 DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 SUPERFAMILY SSF50182 922 987 1.21E-16 T 28-03-2018 IPR010920 LSM domain DDI_RS17755 81930e62db752feb65cafcc6ef682417 1107 Pfam PF00924 Mechanosensitive ion channel 880 1076 2.3E-50 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DDI_RS09980 5b683a25d4bb353100313d05cbdda4e2 303 SUPERFAMILY SSF103481 218 299 1.29E-8 T 28-03-2018 DDI_RS09980 5b683a25d4bb353100313d05cbdda4e2 303 Pfam PF00892 EamA-like transporter family 168 295 1.2E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS18295 cf040e0e60fe96064fe2868b1fd4ae93 654 PRINTS PR00723 Subtilisin serine protease family (S8) signature 27 46 5.1E-10 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related DDI_RS18295 cf040e0e60fe96064fe2868b1fd4ae93 654 PRINTS PR00723 Subtilisin serine protease family (S8) signature 60 73 5.1E-10 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related DDI_RS18295 cf040e0e60fe96064fe2868b1fd4ae93 654 PRINTS PR00723 Subtilisin serine protease family (S8) signature 221 237 5.1E-10 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related DDI_RS18295 cf040e0e60fe96064fe2868b1fd4ae93 654 SUPERFAMILY SSF52743 18 269 3.4E-49 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDI_RS18295 cf040e0e60fe96064fe2868b1fd4ae93 654 Pfam PF00082 Subtilase family 27 270 2.0E-25 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDI_RS18295 cf040e0e60fe96064fe2868b1fd4ae93 654 TIGRFAM TIGR03895 protease_PatA: cyanobactin maturation protease, PatA/PatG family 64 652 8.7E-138 T 28-03-2018 IPR023830 Peptidase S8A, PatG DDI_RS18295 cf040e0e60fe96064fe2868b1fd4ae93 654 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 64 74 - T 28-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site DDI_RS18295 cf040e0e60fe96064fe2868b1fd4ae93 654 Gene3D G3DSA:3.40.50.200 13 297 9.2E-48 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDI_RS09345 34550f10a6c09150577eb2ddb0b78d28 147 Pfam PF09722 Protein of unknown function (DUF2384) 94 144 1.9E-15 T 28-03-2018 IPR024467 Domain of unknown function DUF2384 DDI_RS09345 34550f10a6c09150577eb2ddb0b78d28 147 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 16 147 1.6E-32 T 28-03-2018 IPR011979 Conserved hypothetical protein CHP02293 DDI_RS05680 a28e533f464e511c78e5823bf64edde1 118 SUPERFAMILY SSF142906 1 116 1.57E-30 T 28-03-2018 DDI_RS05680 a28e533f464e511c78e5823bf64edde1 118 Pfam PF04237 YjbR 14 115 6.7E-16 T 28-03-2018 IPR007351 Uncharacterised protein YjbR DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 SUPERFAMILY SSF54292 4 106 1.26E-29 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 SUPERFAMILY SSF46548 107 229 5.76E-32 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 7.3E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 2.0E-32 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 Gene3D G3DSA:1.10.1060.10 107 243 3.1E-27 T 28-03-2018 DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 Gene3D G3DSA:3.10.20.30 1 106 8.1E-30 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS17775 f0a8f6944af9e00c5eaffe2ac56f1235 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 2.1E-98 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDI_RS16585 c061cf3803b09c5243a33f5bc5fbc1a9 458 Gene3D G3DSA:3.30.1330.120 272 411 6.7E-25 T 28-03-2018 DDI_RS16585 c061cf3803b09c5243a33f5bc5fbc1a9 458 SUPERFAMILY SSF103378 6 407 1.44E-74 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 DDI_RS16585 c061cf3803b09c5243a33f5bc5fbc1a9 458 Pfam PF03972 MmgE/PrpD family 8 406 5.3E-70 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 DDI_RS16585 c061cf3803b09c5243a33f5bc5fbc1a9 458 Gene3D G3DSA:1.10.4100.10 1 271 5.7E-68 T 28-03-2018 DDI_RS10090 754379d8a4a2801ad6d473ceba538f3f 373 SUPERFAMILY SSF51197 6 289 5.49E-75 T 28-03-2018 DDI_RS10090 754379d8a4a2801ad6d473ceba538f3f 373 Pfam PF08007 Cupin superfamily protein 9 309 1.9E-100 T 28-03-2018 IPR003347 JmjC domain DDI_RS10090 754379d8a4a2801ad6d473ceba538f3f 373 SMART SM00558 92 215 8.8E-8 T 28-03-2018 IPR003347 JmjC domain DDI_RS10090 754379d8a4a2801ad6d473ceba538f3f 373 Gene3D G3DSA:2.60.120.650 3 209 2.0E-30 T 28-03-2018 DDI_RS11175 0ea7608559cc6990d8ef8e73180b7953 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 52.239 T 28-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 DDI_RS11175 0ea7608559cc6990d8ef8e73180b7953 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 2.0E-124 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DDI_RS11175 0ea7608559cc6990d8ef8e73180b7953 286 SUPERFAMILY SSF53613 1 280 1.31E-73 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS11175 0ea7608559cc6990d8ef8e73180b7953 286 Gene3D G3DSA:3.40.1190.20 1 286 5.9E-62 T 28-03-2018 IPR029056 Ribokinase-like DDI_RS11175 0ea7608559cc6990d8ef8e73180b7953 286 Pfam PF08543 Phosphomethylpyrimidine kinase 75 254 3.0E-13 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DDI_RS11870 9b5d123b6caeff18eadb21d8e04a536f 91 Gene3D G3DSA:1.10.1220.10 1 91 6.0E-12 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS11870 9b5d123b6caeff18eadb21d8e04a536f 91 SUPERFAMILY SSF47598 1 45 2.13E-7 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS09410 895fa41f467cc538288cf411eb8ed6b5 467 SUPERFAMILY SSF56954 29 448 1.44E-78 T 28-03-2018 DDI_RS09410 895fa41f467cc538288cf411eb8ed6b5 467 Pfam PF02321 Outer membrane efflux protein 247 431 6.7E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS09410 895fa41f467cc538288cf411eb8ed6b5 467 Pfam PF02321 Outer membrane efflux protein 29 221 1.1E-19 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS09410 895fa41f467cc538288cf411eb8ed6b5 467 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 26 448 3.4E-141 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 DDI_RS09410 895fa41f467cc538288cf411eb8ed6b5 467 Gene3D G3DSA:1.20.1600.10 22 443 1.1E-60 T 28-03-2018 DDI_RS11465 fe6eab5fb3b4576a78418ed8c66cc0fb 422 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 4 409 4.7E-153 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 DDI_RS11465 fe6eab5fb3b4576a78418ed8c66cc0fb 422 Pfam PF04403 Paraquat-inducible protein A 52 201 6.4E-38 T 28-03-2018 IPR007498 Paraquat-inducible protein A DDI_RS11465 fe6eab5fb3b4576a78418ed8c66cc0fb 422 Pfam PF04403 Paraquat-inducible protein A 254 410 1.8E-55 T 28-03-2018 IPR007498 Paraquat-inducible protein A DDI_RS04020 1a244c6dbc16eb9d2b62d0fb945cf3cb 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 3.0E-51 T 28-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like DDI_RS04020 1a244c6dbc16eb9d2b62d0fb945cf3cb 218 SUPERFAMILY SSF56784 1 210 5.47E-28 T 28-03-2018 IPR023214 HAD-like domain DDI_RS04020 1a244c6dbc16eb9d2b62d0fb945cf3cb 218 Gene3D G3DSA:1.20.1440.100 16 76 3.6E-21 T 28-03-2018 DDI_RS04020 1a244c6dbc16eb9d2b62d0fb945cf3cb 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 2.9E-34 T 28-03-2018 DDI_RS04020 1a244c6dbc16eb9d2b62d0fb945cf3cb 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 1.2E-25 T 28-03-2018 DDI_RS04020 1a244c6dbc16eb9d2b62d0fb945cf3cb 218 Gene3D G3DSA:3.40.50.1000 77 218 7.6E-13 T 28-03-2018 IPR023214 HAD-like domain DDI_RS11340 439ac4fc12af0d3dff4eb538b0db79c6 55 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 52 1.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS11340 439ac4fc12af0d3dff4eb538b0db79c6 55 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 8.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS11340 439ac4fc12af0d3dff4eb538b0db79c6 55 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 8.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS11340 439ac4fc12af0d3dff4eb538b0db79c6 55 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 8.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS11340 439ac4fc12af0d3dff4eb538b0db79c6 55 SUPERFAMILY SSF46785 2 52 2.73E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS11340 439ac4fc12af0d3dff4eb538b0db79c6 55 Gene3D G3DSA:1.10.10.10 1 54 3.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS13610 1572a763250e4d37d03574ed1830fa4c 164 PIRSF PIRSF003093 1 164 1.3E-64 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 DDI_RS13610 1572a763250e4d37d03574ed1830fa4c 164 SUPERFAMILY SSF52540 29 143 4.78E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13610 1572a763250e4d37d03574ed1830fa4c 164 Pfam PF03846 Cell division inhibitor SulA 7 117 1.4E-52 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 DDI_RS13610 1572a763250e4d37d03574ed1830fa4c 164 Gene3D G3DSA:3.40.50.300 29 145 8.8E-20 T 28-03-2018 DDI_RS13610 1572a763250e4d37d03574ed1830fa4c 164 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 164 37.047 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 DDI_RS01370 2a990e766b1a5b4b66c5da440f67278f 217 Gene3D G3DSA:3.30.70.100 2 107 1.1E-5 T 28-03-2018 DDI_RS01370 2a990e766b1a5b4b66c5da440f67278f 217 Gene3D G3DSA:3.30.70.100 112 170 0.18 T 28-03-2018 DDI_RS06430 de907d85acb4b792f952a8188e922615 322 Gene3D G3DSA:3.90.245.10 1 316 8.9E-95 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS06430 de907d85acb4b792f952a8188e922615 322 SUPERFAMILY SSF53590 3 311 9.29E-84 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS06430 de907d85acb4b792f952a8188e922615 322 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 302 2.1E-76 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS06430 de907d85acb4b792f952a8188e922615 322 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 28-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 DDI_RS11400 27a759da4ae6e65117f462098a71d1ec 248 SMART SM00382 26 223 2.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS11400 27a759da4ae6e65117f462098a71d1ec 248 SUPERFAMILY SSF52540 2 231 2.35E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11400 27a759da4ae6e65117f462098a71d1ec 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS11400 27a759da4ae6e65117f462098a71d1ec 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.2E-109 T 28-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 DDI_RS11400 27a759da4ae6e65117f462098a71d1ec 248 Pfam PF00005 ABC transporter 18 172 1.7E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS11400 27a759da4ae6e65117f462098a71d1ec 248 Gene3D G3DSA:3.40.50.300 1 248 6.9E-42 T 28-03-2018 DDI_RS20290 9456055125a06c59e84ab7f5b7dade96 200 SUPERFAMILY SSF48498 86 199 1.87E-9 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS20290 9456055125a06c59e84ab7f5b7dade96 200 SUPERFAMILY SSF46689 6 82 1.7E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS20290 9456055125a06c59e84ab7f5b7dade96 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 1.2E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS20290 9456055125a06c59e84ab7f5b7dade96 200 Gene3D G3DSA:1.10.10.60 2 61 1.1E-12 T 28-03-2018 DDI_RS20290 9456055125a06c59e84ab7f5b7dade96 200 Gene3D G3DSA:1.10.357.10 62 199 1.6E-9 T 28-03-2018 DDI_RS05850 2197e4aa9d628f8e2986c4d645f763c4 180 Gene3D G3DSA:3.30.70.20 61 90 1.9E-11 T 28-03-2018 DDI_RS05850 2197e4aa9d628f8e2986c4d645f763c4 180 Pfam PF13247 4Fe-4S dicluster domain 55 153 5.9E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS05850 2197e4aa9d628f8e2986c4d645f763c4 180 Gene3D G3DSA:3.30.70.20 143 170 0.045 T 28-03-2018 DDI_RS05850 2197e4aa9d628f8e2986c4d645f763c4 180 Gene3D G3DSA:3.30.70.20 1 20 0.0012 T 28-03-2018 DDI_RS05850 2197e4aa9d628f8e2986c4d645f763c4 180 Gene3D G3DSA:3.30.70.20 21 60 8.1E-8 T 28-03-2018 DDI_RS05850 2197e4aa9d628f8e2986c4d645f763c4 180 Gene3D G3DSA:3.30.70.20 91 142 1.4E-14 T 28-03-2018 DDI_RS05850 2197e4aa9d628f8e2986c4d645f763c4 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS05850 2197e4aa9d628f8e2986c4d645f763c4 180 SUPERFAMILY SSF54862 1 169 1.4E-44 T 28-03-2018 DDI_RS20540 b226be6bb84321740b42bfa818b27765 268 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 1.4E-50 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DDI_RS17655 410d0724becfa4fd3c5fe4878473169c 439 Pfam PF13533 Biotin-lipoyl like 210 254 1.3E-7 T 28-03-2018 DDI_RS17655 410d0724becfa4fd3c5fe4878473169c 439 SUPERFAMILY SSF111369 209 379 6.67E-13 T 28-03-2018 DDI_RS17655 410d0724becfa4fd3c5fe4878473169c 439 Pfam PF13437 HlyD family secretion protein 304 402 6.1E-7 T 28-03-2018 DDI_RS17655 410d0724becfa4fd3c5fe4878473169c 439 Gene3D G3DSA:2.40.50.100 199 336 8.8E-12 T 28-03-2018 DDI_RS13690 8d72e2d5fcb90cb36eadb2167834d602 383 SUPERFAMILY SSF51735 2 153 3.09E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS13690 8d72e2d5fcb90cb36eadb2167834d602 383 Gene3D G3DSA:3.30.360.10 143 383 9.9E-42 T 28-03-2018 DDI_RS13690 8d72e2d5fcb90cb36eadb2167834d602 383 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 266 8.6E-7 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 DDI_RS13690 8d72e2d5fcb90cb36eadb2167834d602 383 Gene3D G3DSA:3.40.50.720 1 142 7.9E-40 T 28-03-2018 DDI_RS13690 8d72e2d5fcb90cb36eadb2167834d602 383 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 3.8E-25 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDI_RS13690 8d72e2d5fcb90cb36eadb2167834d602 383 SUPERFAMILY SSF55347 128 327 5.72E-31 T 28-03-2018 DDI_RS14435 163e1f3c90fd162016894d4541c4ef19 330 SMART SM00382 27 214 6.9E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14435 163e1f3c90fd162016894d4541c4ef19 330 Gene3D G3DSA:3.40.50.300 1 272 6.2E-78 T 28-03-2018 DDI_RS14435 163e1f3c90fd162016894d4541c4ef19 330 Pfam PF00005 ABC transporter 18 164 3.6E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14435 163e1f3c90fd162016894d4541c4ef19 330 Pfam PF12857 TOBE-like domain 267 322 2.4E-8 T 28-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 DDI_RS14435 163e1f3c90fd162016894d4541c4ef19 330 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 2.4E-120 T 28-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 DDI_RS14435 163e1f3c90fd162016894d4541c4ef19 330 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS14435 163e1f3c90fd162016894d4541c4ef19 330 SUPERFAMILY SSF52540 3 243 1.02E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14435 163e1f3c90fd162016894d4541c4ef19 330 SUPERFAMILY SSF50331 245 319 8.5E-6 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS17765 429fd68822e34103974be9ae2ac42d38 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 5.2E-6 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS17765 429fd68822e34103974be9ae2ac42d38 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 5.2E-6 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDI_RS17765 429fd68822e34103974be9ae2ac42d38 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 2.1E-133 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 DDI_RS17765 429fd68822e34103974be9ae2ac42d38 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 9.1E-50 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDI_RS17765 429fd68822e34103974be9ae2ac42d38 325 Gene3D G3DSA:3.30.930.10 9 324 5.0E-67 T 28-03-2018 DDI_RS17765 429fd68822e34103974be9ae2ac42d38 325 SUPERFAMILY SSF55681 13 320 3.45E-84 T 28-03-2018 DDI_RS17765 429fd68822e34103974be9ae2ac42d38 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.566 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 SUPERFAMILY SSF88697 276 366 7.18E-23 T 28-03-2018 IPR015947 PUA-like domain DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 SUPERFAMILY SSF53633 6 256 1.44E-64 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 Pfam PF00696 Amino acid kinase family 6 234 2.8E-44 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 6.1E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 6.1E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 6.1E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 6.1E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 6.1E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 PIRSF PIRSF000729 1 367 2.7E-139 T 28-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 Gene3D G3DSA:3.40.1160.10 1 265 8.4E-61 T 28-03-2018 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 Gene3D G3DSA:2.30.130.10 274 366 4.2E-27 T 28-03-2018 IPR002478 PUA domain GO:0003723 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 SMART SM00359 276 359 1.5E-20 T 28-03-2018 IPR002478 PUA domain GO:0003723 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 Pfam PF01472 PUA domain 276 350 1.0E-19 T 28-03-2018 IPR002478 PUA domain GO:0003723 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 28-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 366 9.3E-151 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDI_RS15065 7c306291e6e8c29e3e444edc7b9b2f29 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 263 35.776 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDI_RS13010 e2dce01e914f8cd1c8dca79d31abcd38 263 PIRSF PIRSF029958 1 263 2.4E-98 T 28-03-2018 IPR008701 Necrosis inducing protein DDI_RS13010 e2dce01e914f8cd1c8dca79d31abcd38 263 Pfam PF05630 Necrosis inducing protein (NPP1) 40 245 1.8E-45 T 28-03-2018 IPR008701 Necrosis inducing protein DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 263 300 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 Gene3D G3DSA:3.90.1150.10 8 186 1.2E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 Gene3D G3DSA:3.40.640.10 202 331 5.5E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 22 461 3.2E-213 T 28-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 SUPERFAMILY SSF53383 31 453 6.61E-125 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 Pfam PF00202 Aminotransferase class-III 40 453 1.1E-98 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 PIRSF PIRSF000521 30 150 3.5E-8 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 PIRSF PIRSF000521 146 456 5.0E-34 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDI_RS06110 29777cbfc08986e65e5dad607df0a896 467 Gene3D G3DSA:3.90.1150.10 332 456 2.0E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS19645 6451a7ed25ad1efc4bb68281ddcf5b8e 348 SUPERFAMILY SSF161098 23 64 3.4E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19645 6451a7ed25ad1efc4bb68281ddcf5b8e 348 SUPERFAMILY SSF161098 111 348 3.4E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19645 6451a7ed25ad1efc4bb68281ddcf5b8e 348 Gene3D G3DSA:1.10.3720.10 22 342 1.3E-35 T 28-03-2018 DDI_RS19645 6451a7ed25ad1efc4bb68281ddcf5b8e 348 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 338 2.8E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS17960 3010d8b99aece4ea28672a31d9adb4ca 128 Pfam PF09350 Domain of unknown function (DUF1992) 7 74 5.0E-22 T 28-03-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain DDI_RS12625 c1cd8fc6e626786a9af576804cb95fb4 568 Gene3D G3DSA:1.10.645.10 1 552 2.7E-179 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12625 c1cd8fc6e626786a9af576804cb95fb4 568 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 28-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 DDI_RS12625 c1cd8fc6e626786a9af576804cb95fb4 568 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 28-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 DDI_RS12625 c1cd8fc6e626786a9af576804cb95fb4 568 SUPERFAMILY SSF56762 1 552 1.31E-165 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS12625 c1cd8fc6e626786a9af576804cb95fb4 568 Pfam PF00374 Nickel-dependent hydrogenase 39 552 3.8E-208 T 28-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 DDI_RS05785 84e0ad28739d4ca136a4d23b0bd1cb33 423 Pfam PF13356 Arm DNA-binding domain 3 87 1.1E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain DDI_RS05785 84e0ad28739d4ca136a4d23b0bd1cb33 423 Pfam PF00589 Phage integrase family 208 383 5.4E-17 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS05785 84e0ad28739d4ca136a4d23b0bd1cb33 423 SUPERFAMILY SSF56349 97 393 1.77E-51 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS05785 84e0ad28739d4ca136a4d23b0bd1cb33 423 Gene3D G3DSA:1.10.443.10 201 399 1.7E-21 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS05785 84e0ad28739d4ca136a4d23b0bd1cb33 423 Gene3D G3DSA:1.10.150.130 86 200 5.6E-20 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS00855 ecc5c5d05734e54045041803759f5f0b 119 PIRSF PIRSF018634 1 117 4.8E-51 T 28-03-2018 IPR009387 Toxin HigB-2 DDI_RS00855 ecc5c5d05734e54045041803759f5f0b 119 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 113 2.1E-43 T 28-03-2018 IPR009387 Toxin HigB-2 DDI_RS21015 afb739d6c44077a6d69ffe261e01c0a1 336 Gene3D G3DSA:3.60.70.12 241 334 1.2E-22 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DDI_RS21015 afb739d6c44077a6d69ffe261e01c0a1 336 Gene3D G3DSA:3.60.70.12 15 240 4.6E-60 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DDI_RS21015 afb739d6c44077a6d69ffe261e01c0a1 336 SUPERFAMILY SSF56266 24 322 1.99E-82 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DDI_RS21015 afb739d6c44077a6d69ffe261e01c0a1 336 Pfam PF03576 Peptidase family S58 33 320 8.5E-88 T 28-03-2018 IPR005321 Peptidase S58, DmpA DDI_RS04700 079018768649f2de7d08068389b0deb0 432 Pfam PF00860 Permease family 16 382 2.6E-105 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS04700 079018768649f2de7d08068389b0deb0 432 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DDI_RS04700 079018768649f2de7d08068389b0deb0 432 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 5.5E-126 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DDI_RS19770 651c4f55fe285790479553002ad43d7d 462 Gene3D G3DSA:1.10.287.70 198 401 0.29 T 28-03-2018 DDI_RS19770 651c4f55fe285790479553002ad43d7d 462 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 3.2E-126 T 28-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 DDI_RS19770 651c4f55fe285790479553002ad43d7d 462 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DDI_RS19770 651c4f55fe285790479553002ad43d7d 462 Pfam PF00860 Permease family 33 425 1.8E-109 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS19770 651c4f55fe285790479553002ad43d7d 462 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 456 1.6E-139 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DDI_RS09780 9db40a48309b6e3cf4a0bd422d766b8c 91 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 70 3.0E-28 T 28-03-2018 IPR027354 YcgL domain DDI_RS09780 9db40a48309b6e3cf4a0bd422d766b8c 91 Pfam PF05166 YcgL domain 3 75 8.2E-32 T 28-03-2018 IPR027354 YcgL domain DDI_RS09780 9db40a48309b6e3cf4a0bd422d766b8c 91 SUPERFAMILY SSF160191 1 85 9.55E-38 T 28-03-2018 DDI_RS09780 9db40a48309b6e3cf4a0bd422d766b8c 91 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 26.834 T 28-03-2018 IPR027354 YcgL domain DDI_RS06355 5e0097d215b52913090bca77222c6896 258 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 254 6.1E-72 T 28-03-2018 IPR018648 Protein of unknown function DUF2076 DDI_RS10885 1d2577d5449b9a7113dd83ae1283c092 516 Pfam PF02652 L-lactate permease 9 508 2.1E-125 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DDI_RS10885 1d2577d5449b9a7113dd83ae1283c092 516 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 1 510 4.8E-120 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DDI_RS08145 d822e1cd0f5d7b10e97459a504f46aad 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 35.14 T 28-03-2018 IPR023745 MSF-type transporter, YcaD DDI_RS08145 d822e1cd0f5d7b10e97459a504f46aad 382 Gene3D G3DSA:1.20.1250.20 190 372 3.3E-19 T 28-03-2018 DDI_RS08145 d822e1cd0f5d7b10e97459a504f46aad 382 Gene3D G3DSA:1.20.1250.20 2 189 3.2E-18 T 28-03-2018 DDI_RS08145 d822e1cd0f5d7b10e97459a504f46aad 382 SUPERFAMILY SSF103473 5 371 3.01E-43 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS08145 d822e1cd0f5d7b10e97459a504f46aad 382 Pfam PF07690 Major Facilitator Superfamily 11 284 1.8E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS16400 bd128181455cc9e1ab6efab54a70952e 596 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 30 495 2.8E-56 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DDI_RS16400 bd128181455cc9e1ab6efab54a70952e 596 SUPERFAMILY SSF69279 25 184 9.07E-14 T 28-03-2018 DDI_RS16400 bd128181455cc9e1ab6efab54a70952e 596 SUPERFAMILY SSF69255 370 450 3.92E-18 T 28-03-2018 DDI_RS16400 bd128181455cc9e1ab6efab54a70952e 596 Gene3D G3DSA:3.55.50.10 114 200 0.0013 T 28-03-2018 DDI_RS16400 bd128181455cc9e1ab6efab54a70952e 596 Pfam PF05954 Phage late control gene D protein (GPD) 69 339 2.6E-8 T 28-03-2018 DDI_RS16400 bd128181455cc9e1ab6efab54a70952e 596 Gene3D G3DSA:2.40.50.260 372 476 2.2E-22 T 28-03-2018 DDI_RS16400 bd128181455cc9e1ab6efab54a70952e 596 SUPERFAMILY SSF69349 440 596 6.43E-8 T 28-03-2018 DDI_RS00605 ce217ec24b554c75ff5d3c297a59c068 302 SUPERFAMILY SSF82282 3 299 6.02E-78 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DDI_RS00605 ce217ec24b554c75ff5d3c297a59c068 302 Gene3D G3DSA:3.20.20.330 1 302 1.0E-71 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DDI_RS00605 ce217ec24b554c75ff5d3c297a59c068 302 Pfam PF02574 Homocysteine S-methyltransferase 6 297 1.4E-58 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DDI_RS00605 ce217ec24b554c75ff5d3c297a59c068 302 PIRSF PIRSF037505 2 301 2.7E-11 T 28-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DDI_RS20625 5ac087d2372736d2041bf94357691597 511 Gene3D G3DSA:3.40.309.10 282 485 4.9E-66 T 28-03-2018 DDI_RS20625 5ac087d2372736d2041bf94357691597 511 Pfam PF00171 Aldehyde dehydrogenase family 32 497 1.9E-165 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS20625 5ac087d2372736d2041bf94357691597 511 Gene3D G3DSA:3.40.605.10 15 281 1.9E-97 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS20625 5ac087d2372736d2041bf94357691597 511 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 DDI_RS20625 5ac087d2372736d2041bf94357691597 511 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 DDI_RS20625 5ac087d2372736d2041bf94357691597 511 SUPERFAMILY SSF53720 19 503 9.69E-165 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS06145 04187e5627147806d5ef111d3f21c51d 641 Pfam PF06276 Ferric iron reductase FhuF-like transporter 470 610 5.2E-11 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain DDI_RS06145 04187e5627147806d5ef111d3f21c51d 641 Pfam PF04183 IucA / IucC family 182 424 1.4E-54 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 DDI_RS01605 096a4cb80d7a4b687cc0c0c65e980d1c 345 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 275 5.2E-13 T 28-03-2018 DDI_RS01605 096a4cb80d7a4b687cc0c0c65e980d1c 345 Gene3D G3DSA:1.20.1050.10 189 327 3.4E-44 T 28-03-2018 DDI_RS01605 096a4cb80d7a4b687cc0c0c65e980d1c 345 PIRSF PIRSF015753 5 324 1.4E-130 T 28-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 DDI_RS01605 096a4cb80d7a4b687cc0c0c65e980d1c 345 SUPERFAMILY SSF52833 126 162 2.68E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01605 096a4cb80d7a4b687cc0c0c65e980d1c 345 SUPERFAMILY SSF52833 42 99 2.68E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS01605 096a4cb80d7a4b687cc0c0c65e980d1c 345 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 5.2E-22 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS01605 096a4cb80d7a4b687cc0c0c65e980d1c 345 SUPERFAMILY SSF47616 176 325 2.37E-36 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS01605 096a4cb80d7a4b687cc0c0c65e980d1c 345 Gene3D G3DSA:3.40.30.10 38 188 1.8E-35 T 28-03-2018 DDI_RS04240 58be12430ef02c4127b881bffa69640b 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 4.5E-19 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DDI_RS04240 58be12430ef02c4127b881bffa69640b 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 1.6E-39 T 28-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 DDI_RS02975 1f143a00a3dda5edb2d8b9f57ff83881 141 Gene3D G3DSA:3.40.630.30 1 141 2.4E-34 T 28-03-2018 DDI_RS02975 1f143a00a3dda5edb2d8b9f57ff83881 141 SUPERFAMILY SSF55729 1 130 4.58E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS02975 1f143a00a3dda5edb2d8b9f57ff83881 141 PIRSF PIRSF037663 1 136 2.3E-11 T 28-03-2018 IPR017255 Acetyltransferase, GNAT, predicted DDI_RS02975 1f143a00a3dda5edb2d8b9f57ff83881 141 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 6.7E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS02975 1f143a00a3dda5edb2d8b9f57ff83881 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 49.046 T 28-03-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 DDI_RS16245 bf64ea2ff80bacaf4ede575760d06bdf 172 Gene3D G3DSA:1.20.5.170 2 83 5.6E-16 T 28-03-2018 DDI_RS16245 bf64ea2ff80bacaf4ede575760d06bdf 172 Pfam PF07352 Bacteriophage Mu Gam like protein 20 165 7.4E-43 T 28-03-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 DDI_RS16245 bf64ea2ff80bacaf4ede575760d06bdf 172 SUPERFAMILY SSF161266 15 166 4.84E-46 T 28-03-2018 DDI_RS01000 92ed9782c8f65175184b905c40779c4a 207 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 8 200 3.5E-52 T 28-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein DDI_RS01000 92ed9782c8f65175184b905c40779c4a 207 PIRSF PIRSF033535 3 204 8.9E-30 T 28-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein DDI_RS01000 92ed9782c8f65175184b905c40779c4a 207 SUPERFAMILY SSF141318 42 186 2.62E-15 T 28-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 Gene3D G3DSA:1.10.10.10 1 83 1.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 Gene3D G3DSA:3.40.190.10 87 175 1.2E-7 T 28-03-2018 DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.3E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 Pfam PF03466 LysR substrate binding domain 117 289 9.8E-23 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 SUPERFAMILY SSF53850 89 291 2.09E-26 T 28-03-2018 DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 SUPERFAMILY SSF46785 1 80 1.84E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12925 262c88f692186da2d3232cba768d04dd 303 Gene3D G3DSA:3.40.190.10 176 259 2.4E-13 T 28-03-2018 DDI_RS10575 b53eae81a3b3aea1ab97ad677aac370d 296 Gene3D G3DSA:3.40.190.10 88 175 1.1E-13 T 28-03-2018 DDI_RS10575 b53eae81a3b3aea1ab97ad677aac370d 296 Gene3D G3DSA:3.40.190.10 176 263 6.8E-26 T 28-03-2018 DDI_RS10575 b53eae81a3b3aea1ab97ad677aac370d 296 Pfam PF03466 LysR substrate binding domain 88 291 1.1E-41 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS10575 b53eae81a3b3aea1ab97ad677aac370d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS10575 b53eae81a3b3aea1ab97ad677aac370d 296 SUPERFAMILY SSF53850 89 294 3.62E-46 T 28-03-2018 DDI_RS10575 b53eae81a3b3aea1ab97ad677aac370d 296 SUPERFAMILY SSF46785 7 112 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10575 b53eae81a3b3aea1ab97ad677aac370d 296 Gene3D G3DSA:1.10.10.10 3 84 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 Pfam PF07687 Peptidase dimerisation domain 181 276 2.3E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 SUPERFAMILY SSF55031 181 288 4.78E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 PIRSF PIRSF005962 1 383 9.3E-114 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 Pfam PF01546 Peptidase family M20/M25/M40 73 376 8.3E-33 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 Gene3D G3DSA:3.40.630.10 241 386 4.2E-19 T 28-03-2018 DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 Gene3D G3DSA:3.40.630.10 2 240 4.1E-41 T 28-03-2018 DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 SUPERFAMILY SSF53187 3 196 4.29E-73 T 28-03-2018 DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 SUPERFAMILY SSF53187 297 380 4.29E-73 T 28-03-2018 DDI_RS18735 ff1a510a3f95f14e97d4863b4e64fb0b 386 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 364 1.8E-106 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 DDI_RS20500 65bdde11be7cdea9db885710faff58f3 313 SUPERFAMILY SSF161098 93 291 2.88E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20500 65bdde11be7cdea9db885710faff58f3 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 308 3.1E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20500 65bdde11be7cdea9db885710faff58f3 313 Gene3D G3DSA:1.10.3720.10 2 297 1.7E-31 T 28-03-2018 DDI_RS06655 475d02a1f5644bc0c887f5bd08f53289 477 Pfam PF06812 ImpA, N-terminal, type VI secretion system 5 112 3.2E-23 T 28-03-2018 IPR010657 ImpA, N-terminal DDI_RS06655 475d02a1f5644bc0c887f5bd08f53289 477 Pfam PF12486 Type VI secretion system, EvfB, or VasL 324 471 8.2E-45 T 28-03-2018 IPR021069 ImpA, C-terminal DDI_RS02630 58b828c6dddaa722084d7c0f7fb1a285 352 SUPERFAMILY SSF161098 215 337 1.29E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS02630 58b828c6dddaa722084d7c0f7fb1a285 352 SUPERFAMILY SSF161098 108 176 1.29E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS02630 58b828c6dddaa722084d7c0f7fb1a285 352 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 351 1.2E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS02630 58b828c6dddaa722084d7c0f7fb1a285 352 Gene3D G3DSA:1.10.3720.10 18 340 1.6E-41 T 28-03-2018 DDI_RS11685 750cd93329a9607aa94e041f9f57172c 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 DDI_RS11685 750cd93329a9607aa94e041f9f57172c 341 Gene3D G3DSA:3.20.20.300 1 340 6.4E-81 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS11685 750cd93329a9607aa94e041f9f57172c 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 8 288 2.1E-93 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS11685 750cd93329a9607aa94e041f9f57172c 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.324 T 28-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DDI_RS11685 750cd93329a9607aa94e041f9f57172c 341 SUPERFAMILY SSF51445 3 291 6.95E-84 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS12915 6bd0111bd0750a91dbada9308824d83d 225 Pfam PF01965 DJ-1/PfpI family 25 223 3.2E-14 T 28-03-2018 IPR002818 DJ-1/PfpI DDI_RS12915 6bd0111bd0750a91dbada9308824d83d 225 Gene3D G3DSA:3.40.50.880 1 225 3.7E-62 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS12915 6bd0111bd0750a91dbada9308824d83d 225 SUPERFAMILY SSF52317 1 224 1.24E-75 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS19735 2640838533dc75e09466884880af551d 560 Pfam PF00884 Sulfatase 252 539 7.3E-40 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 DDI_RS19735 2640838533dc75e09466884880af551d 560 Gene3D G3DSA:3.40.720.10 248 546 9.2E-17 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 DDI_RS19735 2640838533dc75e09466884880af551d 560 SUPERFAMILY SSF53649 252 500 3.55E-16 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS19735 2640838533dc75e09466884880af551d 560 Pfam PF08019 Domain of unknown function (DUF1705) 59 175 2.9E-20 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 DDI_RS05075 66eb761420c3af25e07dd752fa766280 219 SMART SM00796 4 203 2.9E-96 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DDI_RS05075 66eb761420c3af25e07dd752fa766280 219 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 203 1.1E-72 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DDI_RS05075 66eb761420c3af25e07dd752fa766280 219 Gene3D G3DSA:3.30.1360.40 4 85 1.4E-9 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 DDI_RS05075 66eb761420c3af25e07dd752fa766280 219 SUPERFAMILY SSF50891 90 215 4.55E-47 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS05075 66eb761420c3af25e07dd752fa766280 219 SUPERFAMILY SSF160467 5 94 9.29E-11 T 28-03-2018 DDI_RS05075 66eb761420c3af25e07dd752fa766280 219 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 212 1.0E-90 T 28-03-2018 IPR010016 KipI family DDI_RS05075 66eb761420c3af25e07dd752fa766280 219 Gene3D G3DSA:2.40.100.10 87 217 1.8E-52 T 28-03-2018 IPR029000 Cyclophilin-like domain DDI_RS21170 b056bc40f7e337cdb659b38d9dbf0679 143 SUPERFAMILY SSF52821 16 142 3.54E-30 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS21170 b056bc40f7e337cdb659b38d9dbf0679 143 Pfam PF00581 Rhodanese-like domain 44 133 2.3E-16 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS21170 b056bc40f7e337cdb659b38d9dbf0679 143 SMART SM00450 40 138 4.4E-21 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS21170 b056bc40f7e337cdb659b38d9dbf0679 143 Gene3D G3DSA:3.40.250.10 24 143 9.7E-24 T 28-03-2018 IPR001763 Rhodanese-like domain DDI_RS06620 009df60d801fedb6e972007059c06198 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 5.6E-157 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 DDI_RS06620 009df60d801fedb6e972007059c06198 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 2.2E-161 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 DDI_RS21270 289daf30becb6775efe67bfc33640fef 84 Pfam PF02416 mttA/Hcf106 family 4 49 5.1E-14 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DDI_RS21270 289daf30becb6775efe67bfc33640fef 84 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 3.3E-21 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DDI_RS21270 289daf30becb6775efe67bfc33640fef 84 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 23.321 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 Gene3D G3DSA:1.20.1260.10 3 167 3.6E-40 T 28-03-2018 IPR012347 Ferritin-related DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 44.101 T 28-03-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 SUPERFAMILY SSF47240 13 167 1.08E-48 T 28-03-2018 IPR009078 Ferritin-like superfamily DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 Pfam PF00210 Ferritin-like domain 30 166 6.1E-24 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.7E-12 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.7E-12 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.7E-12 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DDI_RS07375 8929232c206f5d9e91ac35d628cb9b1e 167 PIRSF PIRSF005900 10 167 2.8E-40 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 DDI_RS21125 87d7729d3900ac454620f5d53bca021b 368 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 175 316 1.9E-22 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 DDI_RS21125 87d7729d3900ac454620f5d53bca021b 368 Gene3D G3DSA:3.40.50.2000 23 160 4.0E-18 T 28-03-2018 DDI_RS21125 87d7729d3900ac454620f5d53bca021b 368 SUPERFAMILY SSF53756 31 367 4.4E-55 T 28-03-2018 DDI_RS21125 87d7729d3900ac454620f5d53bca021b 368 Gene3D G3DSA:3.40.50.2000 171 368 4.6E-39 T 28-03-2018 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 PIRSF PIRSF001365 1 294 2.0E-74 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 Gene3D G3DSA:3.20.20.70 1 294 5.1E-80 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 5.5E-19 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 5.5E-19 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 5.5E-19 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 5.5E-19 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 SUPERFAMILY SSF51569 2 284 3.45E-78 T 28-03-2018 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 SMART SM01130 4 293 2.3E-91 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 Pfam PF00701 Dihydrodipicolinate synthetase family 6 276 8.6E-63 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 DDI_RS16540 fa79d31d67f1bf9c7e4793ab149319e0 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DDI_RS09045 411b665d00be677404b68fa1a4ee76a4 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.2E-27 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS09045 411b665d00be677404b68fa1a4ee76a4 334 SMART SM00382 48 241 2.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09045 411b665d00be677404b68fa1a4ee76a4 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 4.5E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS09045 411b665d00be677404b68fa1a4ee76a4 334 Gene3D G3DSA:3.40.50.300 7 330 1.8E-80 T 28-03-2018 DDI_RS09045 411b665d00be677404b68fa1a4ee76a4 334 Pfam PF00005 ABC transporter 40 191 9.2E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS09045 411b665d00be677404b68fa1a4ee76a4 334 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS09045 411b665d00be677404b68fa1a4ee76a4 334 SUPERFAMILY SSF52540 23 263 1.86E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS17850 b5b8a47c45362fe23a45531cc858d985 585 PIRSF PIRSF000719 1 575 8.2E-282 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 DDI_RS17850 b5b8a47c45362fe23a45531cc858d985 585 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.6E-245 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 DDI_RS17850 b5b8a47c45362fe23a45531cc858d985 585 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.52 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 DDI_RS17850 b5b8a47c45362fe23a45531cc858d985 585 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 572 0.0 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 DDI_RS00035 8c4dd3a9059f44195d1bab7449bd4697 380 Gene3D G3DSA:3.60.10.10 3 377 7.0E-33 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS00035 8c4dd3a9059f44195d1bab7449bd4697 380 SUPERFAMILY SSF56219 111 377 2.11E-30 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS00035 8c4dd3a9059f44195d1bab7449bd4697 380 SUPERFAMILY SSF56219 2 25 2.11E-30 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDI_RS03305 08ac0b762707593280a07a7195f0270c 246 Gene3D G3DSA:3.40.50.1820 2 239 9.0E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS03305 08ac0b762707593280a07a7195f0270c 246 SUPERFAMILY SSF53474 2 238 9.36E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS03305 08ac0b762707593280a07a7195f0270c 246 Pfam PF12146 Serine aminopeptidase, S33 67 226 3.5E-11 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 DDI_RS04260 61d6a04ad22e8d996be09bb473126059 489 Gene3D G3DSA:1.20.1250.20 210 408 2.1E-17 T 28-03-2018 DDI_RS04260 61d6a04ad22e8d996be09bb473126059 489 Gene3D G3DSA:1.20.1250.20 1 209 1.1E-23 T 28-03-2018 DDI_RS04260 61d6a04ad22e8d996be09bb473126059 489 Pfam PF07690 Major Facilitator Superfamily 17 366 4.5E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS04260 61d6a04ad22e8d996be09bb473126059 489 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 3.8E-113 T 28-03-2018 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397 DDI_RS04260 61d6a04ad22e8d996be09bb473126059 489 SUPERFAMILY SSF103473 12 406 1.23E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 Pfam PF07729 FCD domain 96 220 4.6E-22 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.8E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 SMART SM00345 15 74 4.0E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 SUPERFAMILY SSF48008 94 227 5.49E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 SUPERFAMILY SSF46785 10 78 1.36E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 SMART SM00895 95 221 1.2E-17 T 28-03-2018 IPR011711 GntR, C-terminal DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 Gene3D G3DSA:1.20.120.530 89 230 3.0E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 Gene3D G3DSA:1.10.10.10 5 76 9.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.6E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS19585 d1ac778d05992db399c415d95aaee80a 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.6E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDI_RS18215 659d276fdd3b5deefdd09a56f0d1a579 339 Pfam PF01636 Phosphotransferase enzyme family 44 274 4.9E-33 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase DDI_RS18215 659d276fdd3b5deefdd09a56f0d1a579 339 Gene3D G3DSA:3.90.1200.10 117 335 8.7E-21 T 28-03-2018 DDI_RS18215 659d276fdd3b5deefdd09a56f0d1a579 339 Gene3D G3DSA:3.30.200.20 8 116 1.4E-18 T 28-03-2018 DDI_RS18215 659d276fdd3b5deefdd09a56f0d1a579 339 SUPERFAMILY SSF56112 16 309 1.51E-57 T 28-03-2018 IPR011009 Protein kinase-like domain DDI_RS02060 fbad462f8a76bf0dfc870fc01b6d47f9 323 SUPERFAMILY SSF48576 5 322 2.56E-99 T 28-03-2018 IPR008949 Isoprenoid synthase domain DDI_RS02060 fbad462f8a76bf0dfc870fc01b6d47f9 323 Gene3D G3DSA:1.10.600.10 1 323 4.2E-101 T 28-03-2018 IPR008949 Isoprenoid synthase domain DDI_RS02060 fbad462f8a76bf0dfc870fc01b6d47f9 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site DDI_RS02060 fbad462f8a76bf0dfc870fc01b6d47f9 323 Pfam PF00348 Polyprenyl synthetase 32 262 2.1E-77 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 DDI_RS02060 fbad462f8a76bf0dfc870fc01b6d47f9 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site DDI_RS12780 9eff49c5e1cd571a2a41b3a46315bd77 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 28-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site DDI_RS12780 9eff49c5e1cd571a2a41b3a46315bd77 183 SUPERFAMILY SSF56300 1 170 5.52E-38 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS12780 9eff49c5e1cd571a2a41b3a46315bd77 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 3.0E-24 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DDI_RS12780 9eff49c5e1cd571a2a41b3a46315bd77 183 Gene3D G3DSA:3.60.21.10 1 168 1.4E-30 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like DDI_RS12780 9eff49c5e1cd571a2a41b3a46315bd77 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 164 8.6E-38 T 28-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 91.874 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 1.2E-56 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 Gene3D G3DSA:3.30.360.10 188 490 4.7E-125 T 28-03-2018 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 SUPERFAMILY SSF55347 176 488 3.6E-113 T 28-03-2018 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 Gene3D G3DSA:3.40.50.720 7 187 1.4E-61 T 28-03-2018 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 4.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 4.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 4.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 4.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 4.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 28-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 PIRSF PIRSF000110 1 491 9.8E-182 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 SUPERFAMILY SSF51735 5 189 6.1E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 3.7E-198 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS08745 8ae0ffff06f3e783837f4b1eefdb895c 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 1.8E-115 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDI_RS19525 d48d757f434efd4ee3ee25e34f59a3b2 535 Gene3D G3DSA:3.10.105.10 300 506 2.0E-65 T 28-03-2018 DDI_RS19525 d48d757f434efd4ee3ee25e34f59a3b2 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site DDI_RS19525 d48d757f434efd4ee3ee25e34f59a3b2 535 SUPERFAMILY SSF53850 29 534 2.61E-157 T 28-03-2018 DDI_RS19525 d48d757f434efd4ee3ee25e34f59a3b2 535 Gene3D G3DSA:3.90.76.10 38 203 1.8E-36 T 28-03-2018 DDI_RS19525 d48d757f434efd4ee3ee25e34f59a3b2 535 PIRSF PIRSF002741 23 534 3.0E-118 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS19525 d48d757f434efd4ee3ee25e34f59a3b2 535 Gene3D G3DSA:3.40.190.10 204 299 4.6E-27 T 28-03-2018 DDI_RS19525 d48d757f434efd4ee3ee25e34f59a3b2 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 452 3.1E-103 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS12310 a800807b7dec97b95911330e4e856753 89 Gene3D G3DSA:1.10.1200.10 2 80 2.1E-9 T 28-03-2018 DDI_RS12310 a800807b7dec97b95911330e4e856753 89 Pfam PF00550 Phosphopantetheine attachment site 11 76 9.6E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS12310 a800807b7dec97b95911330e4e856753 89 SUPERFAMILY SSF47336 4 81 1.57E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS14020 abdf87d328fac0477202b00193a39ac2 373 SUPERFAMILY SSF56014 265 354 8.29E-10 T 28-03-2018 DDI_RS14020 abdf87d328fac0477202b00193a39ac2 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.772 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DDI_RS14020 abdf87d328fac0477202b00193a39ac2 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 2.6E-124 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DDI_RS14020 abdf87d328fac0477202b00193a39ac2 373 SUPERFAMILY SSF51604 23 138 6.0E-9 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS14020 abdf87d328fac0477202b00193a39ac2 373 Gene3D G3DSA:3.20.20.120 17 201 1.2E-19 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS14020 abdf87d328fac0477202b00193a39ac2 373 Pfam PF04551 GcpE protein 14 354 1.2E-130 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DDI_RS14020 abdf87d328fac0477202b00193a39ac2 373 PIRSF PIRSF004640 1 365 1.3E-146 T 28-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 Pfam PF00342 Phosphoglucose isomerase 52 541 1.5E-256 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 Gene3D G3DSA:1.10.1390.10 513 549 1.1E-20 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.905 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 1.0E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 1.0E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.0E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 1.0E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 1.0E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.0E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 Gene3D G3DSA:3.40.50.10490 145 258 4.2E-54 T 28-03-2018 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 SUPERFAMILY SSF53697 5 548 2.47E-225 T 28-03-2018 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 Gene3D G3DSA:3.40.50.10490 1 144 4.6E-48 T 28-03-2018 DDI_RS17810 43b79b8747cfafcd2cf766ee0ba6e1e2 549 Gene3D G3DSA:3.40.50.10490 259 512 7.7E-126 T 28-03-2018 DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 Gene3D G3DSA:1.10.10.10 169 244 3.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 7.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 7.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 7.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 Pfam PF00196 Bacterial regulatory proteins, luxR family 180 232 9.5E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 SUPERFAMILY SSF75516 13 163 1.83E-41 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 SMART SM00421 177 234 3.5E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 Pfam PF03472 Autoinducer binding domain 14 158 3.3E-37 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 Gene3D G3DSA:3.30.450.80 12 168 1.0E-38 T 28-03-2018 DDI_RS20845 49ccd148444c96c6ce48205337dc6ad9 250 SUPERFAMILY SSF46894 175 240 4.76E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDI_RS13265 2c5b774dd995c0a3e2846ca3a462768d 417 Gene3D G3DSA:3.40.190.10 197 368 5.9E-10 T 28-03-2018 DDI_RS13265 2c5b774dd995c0a3e2846ca3a462768d 417 Pfam PF13416 Bacterial extracellular solute-binding protein 45 354 2.4E-44 T 28-03-2018 DDI_RS13265 2c5b774dd995c0a3e2846ca3a462768d 417 SUPERFAMILY SSF53850 30 405 2.59E-75 T 28-03-2018 DDI_RS13265 2c5b774dd995c0a3e2846ca3a462768d 417 Gene3D G3DSA:3.40.190.10 25 175 5.1E-22 T 28-03-2018 DDI_RS20085 6b89f49bf988c16f0a95c0502cfe44f7 569 Gene3D G3DSA:3.90.550.10 10 272 1.9E-23 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS20085 6b89f49bf988c16f0a95c0502cfe44f7 569 Pfam PF00535 Glycosyl transferase family 2 10 135 3.2E-17 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS20085 6b89f49bf988c16f0a95c0502cfe44f7 569 SUPERFAMILY SSF53448 10 236 5.13E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS06360 e7977f95b91a83fe997e55ce6aaa2e16 357 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 20 143 1.3E-35 T 28-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain DDI_RS06360 e7977f95b91a83fe997e55ce6aaa2e16 357 PRINTS PR00682 Isopenicillin N synthase signature 213 234 7.4E-13 T 28-03-2018 DDI_RS06360 e7977f95b91a83fe997e55ce6aaa2e16 357 PRINTS PR00682 Isopenicillin N synthase signature 42 59 7.4E-13 T 28-03-2018 DDI_RS06360 e7977f95b91a83fe997e55ce6aaa2e16 357 PRINTS PR00682 Isopenicillin N synthase signature 249 275 7.4E-13 T 28-03-2018 DDI_RS06360 e7977f95b91a83fe997e55ce6aaa2e16 357 Gene3D G3DSA:2.60.120.330 14 335 3.4E-86 T 28-03-2018 IPR027443 Isopenicillin N synthase-like DDI_RS06360 e7977f95b91a83fe997e55ce6aaa2e16 357 SUPERFAMILY SSF51197 13 300 1.24E-80 T 28-03-2018 DDI_RS06360 e7977f95b91a83fe997e55ce6aaa2e16 357 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 193 288 2.0E-18 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DDI_RS18265 40cd5599927714fc18c3919e3dc51d75 135 Gene3D G3DSA:3.30.300.20 35 133 1.3E-20 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta DDI_RS18265 40cd5599927714fc18c3919e3dc51d75 135 SUPERFAMILY SSF82784 1 131 1.83E-42 T 28-03-2018 IPR003718 OsmC/Ohr family DDI_RS18265 40cd5599927714fc18c3919e3dc51d75 135 Gene3D G3DSA:2.20.25.10 1 29 9.7E-15 T 28-03-2018 DDI_RS18265 40cd5599927714fc18c3919e3dc51d75 135 Pfam PF02566 OsmC-like protein 30 127 4.1E-19 T 28-03-2018 IPR003718 OsmC/Ohr family DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.347 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 Pfam PF13360 PQQ-like domain 78 320 1.3E-55 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 2.1E-135 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 SMART SM00564 290 321 42.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 SMART SM00564 64 96 3.1E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 SMART SM00564 116 147 4.4E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 SMART SM00564 252 283 3.9E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 SMART SM00564 330 362 5.3 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 SMART SM00564 201 232 76.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 SMART SM00564 155 187 2.8E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 SUPERFAMILY SSF50998 29 384 1.67E-80 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 Gene3D G3DSA:2.140.10.10 193 288 3.8E-12 T 28-03-2018 DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 Gene3D G3DSA:2.140.10.10 289 393 3.3E-16 T 28-03-2018 DDI_RS14005 8c04cb1fd2553ee1518bf42afa1179ef 393 Gene3D G3DSA:2.140.10.10 30 192 3.2E-32 T 28-03-2018 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 PRINTS PR00142 RecA protein signature 299 316 3.3E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 PRINTS PR00142 RecA protein signature 167 196 3.3E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 PRINTS PR00142 RecA protein signature 245 274 3.3E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 PRINTS PR00142 RecA protein signature 212 240 3.3E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 PRINTS PR00142 RecA protein signature 129 158 3.3E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 PRINTS PR00142 RecA protein signature 95 124 3.3E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 Gene3D G3DSA:3.40.50.300 28 270 7.7E-47 T 28-03-2018 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 SMART SM00382 59 230 1.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 9.7E-172 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 Gene3D G3DSA:3.30.250.10 272 328 1.9E-23 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 Hamap MF_00268 Protein RecA [recA]. 7 331 50.871 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 SUPERFAMILY SSF54752 271 327 6.28E-20 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 Pfam PF00154 recA bacterial DNA recombination protein 9 270 2.2E-142 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 ProSitePatterns PS00321 recA signature. 215 223 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 DDI_RS14825 559a5a249c5874139b8b09e0417de579 358 SUPERFAMILY SSF52540 6 269 1.19E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13805 85eaeb21ba25bd9d3931b83e6fdd4d30 171 SMART SM00871 18 171 2.9E-23 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding DDI_RS13805 85eaeb21ba25bd9d3931b83e6fdd4d30 171 SUPERFAMILY SSF55136 18 170 3.14E-24 T 28-03-2018 DDI_RS13805 85eaeb21ba25bd9d3931b83e6fdd4d30 171 Gene3D G3DSA:3.20.80.10 10 171 3.2E-19 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain DDI_RS13805 85eaeb21ba25bd9d3931b83e6fdd4d30 171 Pfam PF06445 GyrI-like small molecule binding domain 18 170 2.3E-23 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain DDI_RS08800 634ccad5aa2ab9bdd679b8e64770e248 365 SUPERFAMILY SSF109604 123 356 1.76E-35 T 28-03-2018 DDI_RS08800 634ccad5aa2ab9bdd679b8e64770e248 365 Pfam PF00072 Response regulator receiver domain 3 113 1.8E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS08800 634ccad5aa2ab9bdd679b8e64770e248 365 Gene3D G3DSA:3.40.50.2300 1 125 1.4E-25 T 28-03-2018 DDI_RS08800 634ccad5aa2ab9bdd679b8e64770e248 365 PIRSF PIRSF036883 1 363 1.8E-71 T 28-03-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative DDI_RS08800 634ccad5aa2ab9bdd679b8e64770e248 365 SMART SM00448 1 113 1.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS08800 634ccad5aa2ab9bdd679b8e64770e248 365 Pfam PF08668 HDOD domain 138 262 6.0E-22 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD DDI_RS08800 634ccad5aa2ab9bdd679b8e64770e248 365 SUPERFAMILY SSF52172 2 125 4.55E-27 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS08800 634ccad5aa2ab9bdd679b8e64770e248 365 Gene3D G3DSA:1.10.3210.10 126 348 4.2E-24 T 28-03-2018 DDI_RS05330 d9d9c690f100dfbf170115ab59b9a5cb 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 2.3E-99 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DDI_RS05330 d9d9c690f100dfbf170115ab59b9a5cb 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 28-03-2018 IPR000808 Mrp, conserved site GO:0005524 DDI_RS05330 d9d9c690f100dfbf170115ab59b9a5cb 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 36.921 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein DDI_RS05330 d9d9c690f100dfbf170115ab59b9a5cb 369 SUPERFAMILY SSF52540 108 355 1.02E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05330 d9d9c690f100dfbf170115ab59b9a5cb 369 Gene3D G3DSA:3.40.50.300 91 328 4.9E-60 T 28-03-2018 DDI_RS05330 d9d9c690f100dfbf170115ab59b9a5cb 369 SUPERFAMILY SSF117916 14 92 3.92E-5 T 28-03-2018 IPR034904 Fe-S cluster assembly domain DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 Gene3D G3DSA:3.20.20.80 11 496 8.4E-148 T 28-03-2018 DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 18 32 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 PRINTS PR00131 Glycosyl hydrolase family 1 signature 432 449 4.9E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 PRINTS PR00131 Glycosyl hydrolase family 1 signature 323 337 4.9E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 PRINTS PR00131 Glycosyl hydrolase family 1 signature 457 469 4.9E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 398 4.9E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 422 4.9E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 SUPERFAMILY SSF51445 13 494 2.79E-155 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS15850 cab8d70c699bd796116860999271b6b7 496 Pfam PF00232 Glycosyl hydrolase family 1 12 492 8.2E-129 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DDI_RS19930 e073521c94ca3683384a705804998312 135 Gene3D G3DSA:2.40.50.200 22 135 1.4E-35 T 28-03-2018 DDI_RS19930 e073521c94ca3683384a705804998312 135 Pfam PF04076 Bacterial OB fold (BOF) protein 31 132 5.8E-34 T 28-03-2018 IPR005220 Bacterial OB-fold DDI_RS19930 e073521c94ca3683384a705804998312 135 SUPERFAMILY SSF101756 34 132 1.7E-32 T 28-03-2018 IPR005220 Bacterial OB-fold DDI_RS19930 e073521c94ca3683384a705804998312 135 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 133 5.4E-40 T 28-03-2018 IPR016052 Bacteriophage 933W, L0136 DDI_RS13900 835a9b3c5c7ca65b91b45df12781a66c 684 SUPERFAMILY SSF110849 36 126 1.41E-12 T 28-03-2018 IPR003115 ParB/Sulfiredoxin DDI_RS13900 835a9b3c5c7ca65b91b45df12781a66c 684 Gene3D G3DSA:3.90.1530.10 14 124 3.4E-20 T 28-03-2018 DDI_RS13900 835a9b3c5c7ca65b91b45df12781a66c 684 Gene3D G3DSA:1.10.10.730 125 170 3.1E-9 T 28-03-2018 DDI_RS13900 835a9b3c5c7ca65b91b45df12781a66c 684 SMART SM00470 27 124 2.8E-16 T 28-03-2018 IPR003115 ParB/Sulfiredoxin DDI_RS13900 835a9b3c5c7ca65b91b45df12781a66c 684 SUPERFAMILY SSF109709 118 221 8.63E-19 T 28-03-2018 DDI_RS13900 835a9b3c5c7ca65b91b45df12781a66c 684 Pfam PF02195 ParB-like nuclease domain 29 121 1.1E-11 T 28-03-2018 IPR003115 ParB/Sulfiredoxin DDI_RS12940 ee7007be786e617c5fc244c1a990e87e 266 Pfam PF01925 Sulfite exporter TauE/SafE 14 249 5.5E-45 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DDI_RS05385 a934caa729dc65af4ea07a4094987dbb 354 Gene3D G3DSA:3.40.50.720 1 193 1.2E-38 T 28-03-2018 DDI_RS05385 a934caa729dc65af4ea07a4094987dbb 354 SUPERFAMILY SSF51735 1 345 2.99E-96 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05385 a934caa729dc65af4ea07a4094987dbb 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 3.7E-96 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05385 a934caa729dc65af4ea07a4094987dbb 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 340 1.4E-158 T 28-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DDI_RS05385 a934caa729dc65af4ea07a4094987dbb 354 Gene3D G3DSA:3.90.25.10 194 350 6.5E-51 T 28-03-2018 DDI_RS06805 8200ded125a5e2d1852d2848fbbec2e7 112 Pfam PF08956 Domain of unknown function (DUF1869) 56 112 3.7E-34 T 28-03-2018 IPR015051 Protein YoaG DDI_RS06805 8200ded125a5e2d1852d2848fbbec2e7 112 Gene3D G3DSA:3.30.160.220 5 56 2.8E-19 T 28-03-2018 IPR015051 Protein YoaG DDI_RS06805 8200ded125a5e2d1852d2848fbbec2e7 112 Gene3D G3DSA:3.30.160.220 57 107 7.0E-27 T 28-03-2018 IPR015051 Protein YoaG DDI_RS06805 8200ded125a5e2d1852d2848fbbec2e7 112 SUPERFAMILY SSF103063 56 112 1.57E-24 T 28-03-2018 IPR015051 Protein YoaG DDI_RS13030 754f9782c22e8f4fdd875631660cc573 426 SUPERFAMILY SSF103473 17 403 3.14E-43 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS13030 754f9782c22e8f4fdd875631660cc573 426 Gene3D G3DSA:1.20.1250.20 221 420 5.5E-13 T 28-03-2018 DDI_RS13030 754f9782c22e8f4fdd875631660cc573 426 Gene3D G3DSA:1.20.1250.20 12 209 7.2E-24 T 28-03-2018 DDI_RS13030 754f9782c22e8f4fdd875631660cc573 426 Pfam PF05977 Transmembrane secretion effector 16 407 1.3E-29 T 28-03-2018 IPR010290 Transmembrane secretion effector DDI_RS10465 da4b4c78ef92814fdaeb00b3a4bdb28d 423 SUPERFAMILY SSF161098 191 409 2.88E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10465 da4b4c78ef92814fdaeb00b3a4bdb28d 423 Gene3D G3DSA:1.10.3720.10 36 417 3.9E-44 T 28-03-2018 DDI_RS10465 da4b4c78ef92814fdaeb00b3a4bdb28d 423 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 222 410 1.8E-7 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS11345 6f905d82308e3681a6562334d369472e 394 SUPERFAMILY SSF81296 50 109 2.8E-8 T 28-03-2018 IPR014756 Immunoglobulin E-set DDI_RS11345 6f905d82308e3681a6562334d369472e 394 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 47 107 1.1E-7 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 DDI_RS11345 6f905d82308e3681a6562334d369472e 394 SUPERFAMILY SSF53474 141 394 1.59E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS11345 6f905d82308e3681a6562334d369472e 394 Gene3D G3DSA:3.40.50.1820 138 394 4.3E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS11345 6f905d82308e3681a6562334d369472e 394 Pfam PF00756 Putative esterase 155 311 6.2E-21 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DDI_RS11345 6f905d82308e3681a6562334d369472e 394 Gene3D G3DSA:2.60.40.10 42 137 8.8E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold DDI_RS02980 e53a61e7357acfb6f761cb36c2371dff 202 Pfam PF06572 Protein of unknown function (DUF1131) 28 197 4.5E-77 T 28-03-2018 IPR010938 Protein of unknown function DUF1131 DDI_RS02980 e53a61e7357acfb6f761cb36c2371dff 202 Gene3D G3DSA:2.60.460.10 36 197 1.7E-58 T 28-03-2018 DDI_RS02980 e53a61e7357acfb6f761cb36c2371dff 202 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 37 196 3.0E-54 T 28-03-2018 IPR010938 Protein of unknown function DUF1131 DDI_RS10650 a2bb9727e5b19e753886e87f9c13b9ee 280 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 94 157 1.1E-31 T 28-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 DDI_RS10650 a2bb9727e5b19e753886e87f9c13b9ee 280 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 6 65 1.2E-18 T 28-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 DDI_RS10650 a2bb9727e5b19e753886e87f9c13b9ee 280 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 175 273 7.2E-24 T 28-03-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 DDI_RS10650 a2bb9727e5b19e753886e87f9c13b9ee 280 Gene3D G3DSA:1.10.260.40 91 158 1.9E-8 T 28-03-2018 DDI_RS10650 a2bb9727e5b19e753886e87f9c13b9ee 280 Gene3D G3DSA:1.10.260.40 2 68 9.0E-6 T 28-03-2018 DDI_RS16180 94ba185cd1773215871dee87beb58599 213 Gene3D G3DSA:1.20.140.50 37 213 5.2E-4 T 28-03-2018 DDI_RS19955 5b51f509e8e452e3cd4fb4fddae6110a 491 SUPERFAMILY SSF53300 322 469 1.47E-18 T 28-03-2018 IPR002035 von Willebrand factor, type A DDI_RS19955 5b51f509e8e452e3cd4fb4fddae6110a 491 Gene3D G3DSA:3.40.50.410 303 466 2.2E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A DDI_RS19955 5b51f509e8e452e3cd4fb4fddae6110a 491 Hamap MF_01626 Protein ViaA [viaA]. 1 488 55.541 T 28-03-2018 IPR023481 Uncharacterised protein family ViaA DDI_RS19955 5b51f509e8e452e3cd4fb4fddae6110a 491 Pfam PF05762 VWA domain containing CoxE-like protein 310 462 1.2E-11 T 28-03-2018 IPR008912 Uncharacterised protein family CoxE-like DDI_RS19955 5b51f509e8e452e3cd4fb4fddae6110a 491 SMART SM00327 324 486 1.6E-7 T 28-03-2018 IPR002035 von Willebrand factor, type A DDI_RS04195 da2a73252f06ab36a3c85017a787012b 82 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 4.0E-16 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDI_RS04195 da2a73252f06ab36a3c85017a787012b 82 Gene3D G3DSA:1.10.287.1040 8 75 1.5E-26 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDI_RS04195 da2a73252f06ab36a3c85017a787012b 82 SUPERFAMILY SSF116842 3 73 1.44E-22 T 28-03-2018 DDI_RS04195 da2a73252f06ab36a3c85017a787012b 82 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.746 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDI_RS04195 da2a73252f06ab36a3c85017a787012b 82 PIRSF PIRSF006488 1 81 1.0E-24 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDI_RS04195 da2a73252f06ab36a3c85017a787012b 82 Pfam PF02609 Exonuclease VII small subunit 11 62 2.6E-21 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDI_RS04195 da2a73252f06ab36a3c85017a787012b 82 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 2.5E-24 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDI_RS14395 44357b18fe78dad99f0503b1655468ee 101 Gene3D G3DSA:3.40.50.2300 2 101 8.2E-35 T 28-03-2018 DDI_RS14395 44357b18fe78dad99f0503b1655468ee 101 SUPERFAMILY SSF52794 1 100 4.19E-34 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS14395 44357b18fe78dad99f0503b1655468ee 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 1.9E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS08260 e368e1534cef5553a46f5abd0e7d7754 241 PIRSF PIRSF006171 14 240 5.9E-65 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 DDI_RS08260 e368e1534cef5553a46f5abd0e7d7754 241 Gene3D G3DSA:3.40.50.2300 15 159 8.4E-24 T 28-03-2018 DDI_RS08260 e368e1534cef5553a46f5abd0e7d7754 241 SUPERFAMILY SSF52172 15 156 6.83E-28 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS08260 e368e1534cef5553a46f5abd0e7d7754 241 Gene3D G3DSA:1.10.1660.10 175 241 0.001 T 28-03-2018 DDI_RS08260 e368e1534cef5553a46f5abd0e7d7754 241 Pfam PF00072 Response regulator receiver domain 18 129 1.6E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS08260 e368e1534cef5553a46f5abd0e7d7754 241 SMART SM00448 16 129 1.5E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS08260 e368e1534cef5553a46f5abd0e7d7754 241 Pfam PF12431 Transcriptional regulator 145 173 2.7E-5 T 28-03-2018 IPR028141 Transcriptional regulator DDI_RS14075 d5a6531a11bb905e539108a79f21110a 172 SUPERFAMILY SSF47144 77 170 1.09E-24 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS14075 d5a6531a11bb905e539108a79f21110a 172 Gene3D G3DSA:1.20.1280.20 80 169 1.2E-24 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS14075 d5a6531a11bb905e539108a79f21110a 172 SUPERFAMILY SSF46565 1 75 1.57E-16 T 28-03-2018 IPR001623 DnaJ domain DDI_RS14075 d5a6531a11bb905e539108a79f21110a 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.093 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS14075 d5a6531a11bb905e539108a79f21110a 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 5.1E-18 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS14075 d5a6531a11bb905e539108a79f21110a 172 Gene3D G3DSA:1.10.287.110 1 79 3.5E-9 T 28-03-2018 IPR001623 DnaJ domain DDI_RS14075 d5a6531a11bb905e539108a79f21110a 172 SMART SM00271 1 66 1.1E-5 T 28-03-2018 IPR001623 DnaJ domain DDI_RS14075 d5a6531a11bb905e539108a79f21110a 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 3.0E-50 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 448 34.145 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 Pfam PF08245 Mur ligase middle domain 106 293 1.0E-47 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 Gene3D G3DSA:3.90.190.20 313 453 5.2E-38 T 28-03-2018 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 Gene3D G3DSA:3.40.1390.10 1 89 1.6E-27 T 28-03-2018 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 Gene3D G3DSA:3.40.1190.10 90 310 1.4E-60 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 SUPERFAMILY SSF53623 100 311 2.49E-58 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 SUPERFAMILY SSF63418 1 97 4.97E-28 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 SUPERFAMILY SSF53244 314 447 9.46E-38 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 Pfam PF01225 Mur ligase family, catalytic domain 23 71 1.5E-8 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 447 1.7E-140 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDI_RS16745 58fc0f7322b5fc72aaa11ffa3b55708a 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 392 1.6E-12 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS07575 e4269a6dbb5c7815f132d200c8995e10 154 SUPERFAMILY SSF88723 37 136 5.89E-5 T 28-03-2018 IPR029060 PIN domain-like DDI_RS07575 e4269a6dbb5c7815f132d200c8995e10 154 Gene3D G3DSA:3.40.50.1010 2 137 4.4E-5 T 28-03-2018 IPR029060 PIN domain-like DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 249 1.4E-26 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 Gene3D G3DSA:1.10.150.20 174 251 9.8E-25 T 28-03-2018 DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 SMART SM00279 162 197 3.7E-12 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 146 7.9E-30 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 45.344 T 28-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 SUPERFAMILY SSF88723 4 159 5.89E-38 T 28-03-2018 IPR029060 PIN domain-like DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 SMART SM00475 3 250 5.2E-90 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 Gene3D G3DSA:3.40.50.1010 3 173 1.5E-40 T 28-03-2018 IPR029060 PIN domain-like DDI_RS03675 6c3e69818de6d303ed6f33336ead3eec 253 SUPERFAMILY SSF47807 160 243 1.79E-24 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 Gene3D G3DSA:2.30.42.10 368 456 2.0E-14 T 28-03-2018 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 Gene3D G3DSA:2.40.10.10 29 139 4.7E-34 T 28-03-2018 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 Gene3D G3DSA:2.40.10.10 140 258 4.3E-41 T 28-03-2018 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 SMART SM00228 268 350 1.5E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 SMART SM00228 375 448 1.0E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 Pfam PF13180 PDZ domain 284 358 3.1E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 Pfam PF13365 Trypsin-like peptidase domain 93 229 1.5E-32 T 28-03-2018 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 SUPERFAMILY SSF50156 226 351 1.16E-24 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 444 6.8E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 1.2E-58 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 1.2E-58 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 1.2E-58 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 1.2E-58 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 1.2E-58 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 1.2E-58 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 SUPERFAMILY SSF50156 387 452 3.42E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 SUPERFAMILY SSF50494 39 264 1.55E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 Gene3D G3DSA:2.30.42.10 263 367 6.9E-27 T 28-03-2018 DDI_RS00305 5589747ed8e2a37e9c73588d5fcd48d2 456 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 454 1.0E-160 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DDI_RS09425 104ae9976e7e23c45b8f56463c3db13b 120 PRINTS PR01274 Metalloprotease inhibitor signature 20 36 3.3E-19 T 28-03-2018 IPR022815 Protease inhibitor I38 DDI_RS09425 104ae9976e7e23c45b8f56463c3db13b 120 PRINTS PR01274 Metalloprotease inhibitor signature 81 94 3.3E-19 T 28-03-2018 IPR022815 Protease inhibitor I38 DDI_RS09425 104ae9976e7e23c45b8f56463c3db13b 120 PRINTS PR01274 Metalloprotease inhibitor signature 59 70 3.3E-19 T 28-03-2018 IPR022815 Protease inhibitor I38 DDI_RS09425 104ae9976e7e23c45b8f56463c3db13b 120 PRINTS PR01274 Metalloprotease inhibitor signature 98 111 3.3E-19 T 28-03-2018 IPR022815 Protease inhibitor I38 DDI_RS09425 104ae9976e7e23c45b8f56463c3db13b 120 SUPERFAMILY SSF50882 20 118 1.18E-28 T 28-03-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 DDI_RS09425 104ae9976e7e23c45b8f56463c3db13b 120 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 28 115 3.0E-43 T 28-03-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 DDI_RS09425 104ae9976e7e23c45b8f56463c3db13b 120 Pfam PF02974 Protease inhibitor Inh 25 117 1.9E-22 T 28-03-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 DDI_RS09425 104ae9976e7e23c45b8f56463c3db13b 120 Gene3D G3DSA:2.40.128.10 26 118 1.8E-22 T 28-03-2018 DDI_RS14575 60e4089767fe38a06cacb588e2a4fa7d 354 SMART SM00382 31 216 1.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14575 60e4089767fe38a06cacb588e2a4fa7d 354 Pfam PF08402 TOBE domain 280 344 1.3E-6 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS14575 60e4089767fe38a06cacb588e2a4fa7d 354 Pfam PF00005 ABC transporter 22 166 1.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14575 60e4089767fe38a06cacb588e2a4fa7d 354 SUPERFAMILY SSF52540 7 248 2.92E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14575 60e4089767fe38a06cacb588e2a4fa7d 354 SUPERFAMILY SSF50331 242 345 2.78E-9 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS14575 60e4089767fe38a06cacb588e2a4fa7d 354 Gene3D G3DSA:3.40.50.300 2 246 1.1E-56 T 28-03-2018 DDI_RS19375 be90ba747d7d019c5f35e87975ec4f60 207 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 8 192 6.3E-65 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DDI_RS19375 be90ba747d7d019c5f35e87975ec4f60 207 Gene3D G3DSA:3.40.50.150 1 201 7.8E-35 T 28-03-2018 DDI_RS19375 be90ba747d7d019c5f35e87975ec4f60 207 Pfam PF03602 Conserved hypothetical protein 95 13 190 2.7E-62 T 28-03-2018 DDI_RS19375 be90ba747d7d019c5f35e87975ec4f60 207 PIRSF PIRSF004553 12 194 8.3E-57 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DDI_RS19375 be90ba747d7d019c5f35e87975ec4f60 207 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 127 133 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS19375 be90ba747d7d019c5f35e87975ec4f60 207 SUPERFAMILY SSF53335 12 192 1.41E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS19160 0c361c876530d7feed440f0af944dbf2 365 Hamap MF_01841 Agmatine deiminase [aguA]. 5 362 58.313 T 28-03-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DDI_RS19160 0c361c876530d7feed440f0af944dbf2 365 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 361 8.3E-120 T 28-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DDI_RS19160 0c361c876530d7feed440f0af944dbf2 365 Gene3D G3DSA:3.75.10.10 1 365 9.2E-134 T 28-03-2018 DDI_RS19160 0c361c876530d7feed440f0af944dbf2 365 SUPERFAMILY SSF55909 5 362 9.46E-135 T 28-03-2018 DDI_RS19160 0c361c876530d7feed440f0af944dbf2 365 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 362 9.8E-169 T 28-03-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DDI_RS09255 cf6aab0114c15bb490e277954d631765 328 Gene3D G3DSA:1.10.3470.10 5 321 3.2E-31 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS09255 cf6aab0114c15bb490e277954d631765 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 315 2.2E-43 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS01120 92d1c207cae07a4a1337c06b9b302dbb 236 Gene3D G3DSA:1.10.3210.10 7 216 4.7E-18 T 28-03-2018 DDI_RS01120 92d1c207cae07a4a1337c06b9b302dbb 236 SUPERFAMILY SSF109604 8 216 3.45E-55 T 28-03-2018 DDI_RS01120 92d1c207cae07a4a1337c06b9b302dbb 236 SMART SM00471 23 142 4.5E-5 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS01120 92d1c207cae07a4a1337c06b9b302dbb 236 Pfam PF01966 HD domain 29 132 3.7E-10 T 28-03-2018 IPR006674 HD domain DDI_RS03265 0da7f49931751722aa2b8885a5acbede 261 Gene3D G3DSA:2.40.160.20 181 259 0.016 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS03265 0da7f49931751722aa2b8885a5acbede 261 Gene3D G3DSA:2.40.160.20 15 180 0.4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS03265 0da7f49931751722aa2b8885a5acbede 261 Pfam PF06629 MltA-interacting protein MipA 36 261 2.0E-39 T 28-03-2018 IPR010583 MltA-interacting MipA DDI_RS15475 34df04597b003263a1099b5bd5916a11 122 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 4.4E-33 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 DDI_RS15475 34df04597b003263a1099b5bd5916a11 122 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 120 9.9E-35 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 DDI_RS15475 34df04597b003263a1099b5bd5916a11 122 PIRSF PIRSF006113 1 120 6.3E-54 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 DDI_RS15475 34df04597b003263a1099b5bd5916a11 122 Gene3D G3DSA:3.30.479.10 1 120 7.6E-41 T 28-03-2018 DDI_RS15475 34df04597b003263a1099b5bd5916a11 122 SUPERFAMILY SSF55620 3 119 4.0E-41 T 28-03-2018 DDI_RS04155 d4b29288502ae8d1d9be4498b77d4af7 149 Pfam PF03477 ATP cone domain 50 136 1.6E-14 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DDI_RS04155 d4b29288502ae8d1d9be4498b77d4af7 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 87.471 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DDI_RS04155 d4b29288502ae8d1d9be4498b77d4af7 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 7.0E-76 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DDI_RS10130 f2de959c84c06c55aeb9547510c1e308 44 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 4 40 1.0E-17 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 DDI_RS10130 f2de959c84c06c55aeb9547510c1e308 44 Gene3D G3DSA:2.10.260.10 7 39 3.1E-5 T 28-03-2018 DDI_RS18015 700350dfe7e9fc89b94dc7f5527325c5 117 SUPERFAMILY SSF53137 3 115 1.9E-53 T 28-03-2018 DDI_RS18015 700350dfe7e9fc89b94dc7f5527325c5 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.275 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18015 700350dfe7e9fc89b94dc7f5527325c5 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.2E-46 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS18015 700350dfe7e9fc89b94dc7f5527325c5 117 Gene3D G3DSA:3.30.420.100 1 117 3.0E-38 T 28-03-2018 DDI_RS18015 700350dfe7e9fc89b94dc7f5527325c5 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.7E-43 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS09860 59d8bc3e41cce14340ae12b37e768564 318 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 159 307 7.7E-55 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 DDI_RS09860 59d8bc3e41cce14340ae12b37e768564 318 SUPERFAMILY SSF53062 3 128 5.76E-36 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DDI_RS09860 59d8bc3e41cce14340ae12b37e768564 318 SUPERFAMILY SSF52728 157 315 1.11E-54 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DDI_RS09860 59d8bc3e41cce14340ae12b37e768564 318 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 116 1.6E-43 T 28-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 DDI_RS09860 59d8bc3e41cce14340ae12b37e768564 318 Gene3D G3DSA:3.40.35.10 158 314 8.2E-59 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DDI_RS09860 59d8bc3e41cce14340ae12b37e768564 318 Pfam PF03610 PTS system fructose IIA component 5 117 2.7E-31 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DDI_RS09860 59d8bc3e41cce14340ae12b37e768564 318 Gene3D G3DSA:3.40.50.510 1 141 1.8E-33 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DDI_RS09860 59d8bc3e41cce14340ae12b37e768564 318 Pfam PF03830 PTS system sorbose subfamily IIB component 159 306 1.4E-54 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DDI_RS17570 3e9b7f3fe9f6cb79c8add1fba90ce042 461 Gene3D G3DSA:3.40.50.1980 349 441 6.8E-13 T 28-03-2018 DDI_RS17570 3e9b7f3fe9f6cb79c8add1fba90ce042 461 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 2 432 5.2E-191 T 28-03-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0006461|GO:0009399 DDI_RS17570 3e9b7f3fe9f6cb79c8add1fba90ce042 461 Gene3D G3DSA:3.40.50.1980 166 276 6.9E-26 T 28-03-2018 DDI_RS17570 3e9b7f3fe9f6cb79c8add1fba90ce042 461 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 20 430 6.7E-92 T 28-03-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 DDI_RS17570 3e9b7f3fe9f6cb79c8add1fba90ce042 461 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 37 44 - T 28-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 DDI_RS17570 3e9b7f3fe9f6cb79c8add1fba90ce042 461 Gene3D G3DSA:1.20.89.10 277 346 2.1E-21 T 28-03-2018 DDI_RS17570 3e9b7f3fe9f6cb79c8add1fba90ce042 461 Gene3D G3DSA:3.40.50.1980 19 164 2.2E-36 T 28-03-2018 DDI_RS17570 3e9b7f3fe9f6cb79c8add1fba90ce042 461 SUPERFAMILY SSF53807 7 448 2.32E-116 T 28-03-2018 DDI_RS03455 23a2d7aedf31890822566de3ffdad711 449 Gene3D G3DSA:3.90.220.20 5 195 6.2E-26 T 28-03-2018 DDI_RS03455 23a2d7aedf31890822566de3ffdad711 449 Gene3D G3DSA:3.90.220.20 196 425 6.5E-35 T 28-03-2018 DDI_RS03455 23a2d7aedf31890822566de3ffdad711 449 SUPERFAMILY SSF116734 230 444 1.5E-39 T 28-03-2018 DDI_RS03455 23a2d7aedf31890822566de3ffdad711 449 Pfam PF01420 Type I restriction modification DNA specificity domain 242 424 1.7E-12 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DDI_RS03455 23a2d7aedf31890822566de3ffdad711 449 Pfam PF01420 Type I restriction modification DNA specificity domain 27 200 3.9E-10 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DDI_RS03455 23a2d7aedf31890822566de3ffdad711 449 SUPERFAMILY SSF116734 15 221 1.47E-36 T 28-03-2018 DDI_RS16215 506fee6eb3ccb7dd2963844b39aaf49c 61 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 4 58 2.7E-26 T 28-03-2018 IPR026365 Phage-associated protein, BcepMu gp16 family DDI_RS16215 506fee6eb3ccb7dd2963844b39aaf49c 61 Gene3D G3DSA:1.10.260.40 1 61 8.1E-6 T 28-03-2018 DDI_RS16215 506fee6eb3ccb7dd2963844b39aaf49c 61 SUPERFAMILY SSF47413 6 59 2.48E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS10205 9d78db7c0271c82269325202739a5e56 179 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 4 171 3.9E-39 T 28-03-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 DDI_RS10205 9d78db7c0271c82269325202739a5e56 179 SUPERFAMILY SSF56399 7 177 1.27E-54 T 28-03-2018 DDI_RS10205 9d78db7c0271c82269325202739a5e56 179 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 4 178 32.875 T 28-03-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 Pfam PF03466 LysR substrate binding domain 88 296 5.9E-22 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 SUPERFAMILY SSF53850 90 297 2.17E-25 T 28-03-2018 DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 SUPERFAMILY SSF46785 2 111 1.24E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 Gene3D G3DSA:3.40.190.10 90 180 9.2E-17 T 28-03-2018 DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 Gene3D G3DSA:3.40.190.10 181 261 7.8E-7 T 28-03-2018 DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.7E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06350 a0d2bde3e5d35c0d38517d9ec10ffc5d 313 Gene3D G3DSA:1.10.10.10 1 89 1.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03170 ac26b33eec28c0e61d2e2dff02aa61b4 324 Pfam PF07859 alpha/beta hydrolase fold 80 301 1.6E-21 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 DDI_RS03170 ac26b33eec28c0e61d2e2dff02aa61b4 324 SUPERFAMILY SSF53474 29 323 1.83E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS03170 ac26b33eec28c0e61d2e2dff02aa61b4 324 Gene3D G3DSA:3.40.50.1820 9 324 6.0E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS10080 c75495830c95e8a4bb5855770ee3ddc5 222 SMART SM00448 1 112 1.8E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS10080 c75495830c95e8a4bb5855770ee3ddc5 222 SUPERFAMILY SSF52172 1 172 5.69E-37 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS10080 c75495830c95e8a4bb5855770ee3ddc5 222 Gene3D G3DSA:1.10.10.10 118 222 1.7E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS10080 c75495830c95e8a4bb5855770ee3ddc5 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 3.1E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS10080 c75495830c95e8a4bb5855770ee3ddc5 222 Pfam PF00072 Response regulator receiver domain 3 112 8.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS10080 c75495830c95e8a4bb5855770ee3ddc5 222 SMART SM00862 145 220 6.2E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS10080 c75495830c95e8a4bb5855770ee3ddc5 222 Gene3D G3DSA:3.40.50.2300 1 117 2.4E-32 T 28-03-2018 DDI_RS21340 d33ea015ea8daff089ef1b2515451588 443 SUPERFAMILY SSF55920 163 438 1.1E-55 T 28-03-2018 IPR000994 Peptidase M24 DDI_RS21340 d33ea015ea8daff089ef1b2515451588 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DDI_RS21340 d33ea015ea8daff089ef1b2515451588 443 Gene3D G3DSA:3.90.230.10 159 442 1.4E-53 T 28-03-2018 DDI_RS21340 d33ea015ea8daff089ef1b2515451588 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.282 T 28-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 DDI_RS21340 d33ea015ea8daff089ef1b2515451588 443 Pfam PF00557 Metallopeptidase family M24 168 430 1.3E-44 T 28-03-2018 IPR000994 Peptidase M24 DDI_RS11635 cf603c84e95d34329fbe25473965911f 501 SUPERFAMILY SSF141868 251 499 4.18E-75 T 28-03-2018 IPR001633 EAL domain DDI_RS11635 cf603c84e95d34329fbe25473965911f 501 Gene3D G3DSA:3.20.20.450 250 501 8.8E-77 T 28-03-2018 IPR001633 EAL domain DDI_RS11635 cf603c84e95d34329fbe25473965911f 501 Pfam PF00563 EAL domain 253 487 2.8E-63 T 28-03-2018 IPR001633 EAL domain DDI_RS11635 cf603c84e95d34329fbe25473965911f 501 Pfam PF12792 CSS motif domain associated with EAL 32 210 2.6E-30 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DDI_RS11635 cf603c84e95d34329fbe25473965911f 501 SMART SM00052 245 492 4.0E-91 T 28-03-2018 IPR001633 EAL domain DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 SMART SM00304 231 283 5.2E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 499 5.4E-57 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 Gene3D G3DSA:1.10.287.1060 261 342 0.11 T 28-03-2018 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 Gene3D G3DSA:1.20.120.30 40 203 2.2E-22 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 309 331 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 Pfam PF02203 Tar ligand binding domain homologue 18 184 3.3E-26 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 SMART SM00283 284 531 1.3E-91 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 Gene3D G3DSA:1.10.287.950 343 535 3.6E-47 T 28-03-2018 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 SUPERFAMILY SSF47170 48 175 2.75E-13 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 SUPERFAMILY SSF58104 251 533 5.49E-75 T 28-03-2018 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 409 8.7E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 459 488 8.7E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 8.7E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 8.7E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12200 f06bba491b5bcbdd22b78d471a3382e0 575 Pfam PF00672 HAMP domain 232 280 2.6E-14 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS20775 588f2dbd718189f5bd572098bd4e1571 312 Gene3D G3DSA:3.40.47.10 8 167 1.6E-5 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20775 588f2dbd718189f5bd572098bd4e1571 312 Gene3D G3DSA:3.40.47.10 168 306 1.8E-6 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20775 588f2dbd718189f5bd572098bd4e1571 312 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 115 180 1.3E-7 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDI_RS20775 588f2dbd718189f5bd572098bd4e1571 312 SUPERFAMILY SSF53901 104 307 2.88E-11 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS16515 60485c8bc2a1eae734691bdb40e2a4da 188 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 177 2.0E-57 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DDI_RS16515 60485c8bc2a1eae734691bdb40e2a4da 188 Pfam PF03641 Possible lysine decarboxylase 46 175 1.8E-38 T 28-03-2018 IPR031100 LOG family DDI_RS16515 60485c8bc2a1eae734691bdb40e2a4da 188 Gene3D G3DSA:3.40.50.450 3 188 3.6E-56 T 28-03-2018 DDI_RS16515 60485c8bc2a1eae734691bdb40e2a4da 188 SUPERFAMILY SSF102405 4 174 1.45E-57 T 28-03-2018 DDI_RS10785 11a9c248310d45e6cb023fc04ab6b4dd 392 Gene3D G3DSA:3.55.50.10 119 229 3.1E-4 T 28-03-2018 DDI_RS10785 11a9c248310d45e6cb023fc04ab6b4dd 392 Pfam PF05954 Phage late control gene D protein (GPD) 52 359 1.2E-24 T 28-03-2018 DDI_RS10785 11a9c248310d45e6cb023fc04ab6b4dd 392 SUPERFAMILY SSF69279 36 186 3.74E-18 T 28-03-2018 DDI_RS12505 875873213ebd00e1b0d900b3a1774544 428 Pfam PF08376 Nitrate and nitrite sensing 38 278 5.2E-44 T 28-03-2018 IPR013587 Nitrate/nitrite sensing protein DDI_RS12505 875873213ebd00e1b0d900b3a1774544 428 SUPERFAMILY SSF52172 339 417 2.04E-16 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS12505 875873213ebd00e1b0d900b3a1774544 428 Pfam PF03861 ANTAR domain 366 417 4.7E-18 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 DDI_RS12505 875873213ebd00e1b0d900b3a1774544 428 SMART SM01012 363 418 3.0E-22 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 DDI_RS12505 875873213ebd00e1b0d900b3a1774544 428 Gene3D G3DSA:1.10.10.10 367 419 1.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS01290 9012fa9eb0bbdd3f60504b8c2f7b821c 271 SMART SM00382 34 217 4.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS01290 9012fa9eb0bbdd3f60504b8c2f7b821c 271 SUPERFAMILY SSF52540 7 229 2.15E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01290 9012fa9eb0bbdd3f60504b8c2f7b821c 271 Gene3D G3DSA:3.40.50.300 5 234 2.9E-55 T 28-03-2018 DDI_RS01290 9012fa9eb0bbdd3f60504b8c2f7b821c 271 Pfam PF00005 ABC transporter 25 172 2.5E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS01440 22850541e15c3e7fdc4ec72392c1fda5 399 Gene3D G3DSA:3.30.390.10 21 162 3.7E-28 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS01440 22850541e15c3e7fdc4ec72392c1fda5 399 SMART SM00922 176 273 8.6E-28 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS01440 22850541e15c3e7fdc4ec72392c1fda5 399 SUPERFAMILY SSF51604 144 385 5.37E-72 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS01440 22850541e15c3e7fdc4ec72392c1fda5 399 Gene3D G3DSA:3.20.20.120 163 381 1.8E-62 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS01440 22850541e15c3e7fdc4ec72392c1fda5 399 SUPERFAMILY SSF54826 27 157 1.38E-25 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS01440 22850541e15c3e7fdc4ec72392c1fda5 399 Pfam PF13378 Enolase C-terminal domain-like 186 383 2.1E-60 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS01440 22850541e15c3e7fdc4ec72392c1fda5 399 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 223 254 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DDI_RS01440 22850541e15c3e7fdc4ec72392c1fda5 399 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 60 156 2.1E-12 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DDI_RS01250 f5472e19af72634158bd34218bb740ca 213 Pfam PF04972 BON domain 145 212 6.5E-21 T 28-03-2018 IPR007055 BON domain DDI_RS01250 f5472e19af72634158bd34218bb740ca 213 Pfam PF04972 BON domain 65 132 3.3E-19 T 28-03-2018 IPR007055 BON domain DDI_RS01250 f5472e19af72634158bd34218bb740ca 213 SMART SM00749 150 213 1.3E-10 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria DDI_RS01250 f5472e19af72634158bd34218bb740ca 213 SMART SM00749 70 133 1.2E-9 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria DDI_RS04875 3cd588faac458c515b0bc28f11348ac8 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 1.4E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS04875 3cd588faac458c515b0bc28f11348ac8 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.7E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS04875 3cd588faac458c515b0bc28f11348ac8 224 Gene3D G3DSA:1.10.3720.10 10 224 4.1E-43 T 28-03-2018 DDI_RS04875 3cd588faac458c515b0bc28f11348ac8 224 SUPERFAMILY SSF161098 14 210 6.93E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS18740 46a75f2626150bac99293a8819d14b0f 253 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS18740 46a75f2626150bac99293a8819d14b0f 253 SMART SM00382 26 216 7.8E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS18740 46a75f2626150bac99293a8819d14b0f 253 SUPERFAMILY SSF52540 1 238 5.9E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18740 46a75f2626150bac99293a8819d14b0f 253 Pfam PF00005 ABC transporter 17 168 7.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS18740 46a75f2626150bac99293a8819d14b0f 253 Gene3D G3DSA:3.40.50.300 1 251 3.0E-77 T 28-03-2018 DDI_RS18740 46a75f2626150bac99293a8819d14b0f 253 PIRSF PIRSF039085 1 244 3.7E-99 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS17895 51084e514085835281141818bdd1f234 181 SUPERFAMILY SSF51161 7 175 1.11E-45 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS17895 51084e514085835281141818bdd1f234 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 46 6.7E-6 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS17895 51084e514085835281141818bdd1f234 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.6E-8 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS17895 51084e514085835281141818bdd1f234 181 Gene3D G3DSA:2.160.10.10 2 181 2.5E-43 T 28-03-2018 DDI_RS18335 cb87d651c8b524992c98afb9d9f647b1 420 Pfam PF13229 Right handed beta helix region 165 326 3.5E-6 T 28-03-2018 DDI_RS18335 cb87d651c8b524992c98afb9d9f647b1 420 SUPERFAMILY SSF51126 15 360 2.0E-48 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS18335 cb87d651c8b524992c98afb9d9f647b1 420 Gene3D G3DSA:2.160.20.10 15 360 7.7E-46 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS19465 1065d8fcfb1404d70bd4d497a8622d11 155 Pfam PF03500 Cellulose synthase subunit D 34 133 1.5E-11 T 28-03-2018 IPR022798 Cellulose synthase subunit D, bacterial DDI_RS03015 ef218f85f197e82f02b7ba52b6f84a6b 648 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS03015 ef218f85f197e82f02b7ba52b6f84a6b 648 Pfam PF02687 FtsX-like permease family 554 641 1.2E-8 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDI_RS03015 ef218f85f197e82f02b7ba52b6f84a6b 648 SUPERFAMILY SSF52540 5 228 1.33E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS03015 ef218f85f197e82f02b7ba52b6f84a6b 648 Pfam PF00005 ABC transporter 25 173 1.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS03015 ef218f85f197e82f02b7ba52b6f84a6b 648 Gene3D G3DSA:3.40.50.300 1 239 3.4E-63 T 28-03-2018 DDI_RS03015 ef218f85f197e82f02b7ba52b6f84a6b 648 Pfam PF12704 MacB-like periplasmic core domain 273 492 7.5E-39 T 28-03-2018 IPR025857 MacB-like periplasmic core domain DDI_RS03015 ef218f85f197e82f02b7ba52b6f84a6b 648 SMART SM00382 34 221 6.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20820 a51f65240b99f063a176a9c5edd3d529 103 Gene3D G3DSA:1.10.1200.10 20 98 1.5E-8 T 28-03-2018 DDI_RS20820 a51f65240b99f063a176a9c5edd3d529 103 Pfam PF00550 Phosphopantetheine attachment site 23 92 3.0E-5 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS20820 a51f65240b99f063a176a9c5edd3d529 103 SUPERFAMILY SSF47336 22 97 1.96E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS19350 e597a5060a62b9a95d346c59fb34570f 139 Gene3D G3DSA:3.40.630.30 1 133 2.4E-14 T 28-03-2018 DDI_RS19350 e597a5060a62b9a95d346c59fb34570f 139 Pfam PF12568 Acetyltransferase (GNAT) domain 3 131 1.9E-43 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS19350 e597a5060a62b9a95d346c59fb34570f 139 Hamap MF_02018 PanD maturation factor [panM]. 1 132 32.172 T 28-03-2018 IPR032900 PanD regulatory factor PanM GO:0015940|GO:0031638 DDI_RS19350 e597a5060a62b9a95d346c59fb34570f 139 SUPERFAMILY SSF55729 21 130 1.89E-13 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS20945 c58fe45a0fa5e3859d42c3e5a380e207 353 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 144 285 1.5E-30 T 28-03-2018 IPR006342 Methyltransferase FkbM DDI_RS20945 c58fe45a0fa5e3859d42c3e5a380e207 353 Gene3D G3DSA:3.40.50.150 127 336 1.5E-35 T 28-03-2018 DDI_RS20945 c58fe45a0fa5e3859d42c3e5a380e207 353 SUPERFAMILY SSF53335 89 325 6.81E-48 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS20945 c58fe45a0fa5e3859d42c3e5a380e207 353 Pfam PF05050 Methyltransferase FkbM domain 147 319 3.2E-18 T 28-03-2018 IPR006342 Methyltransferase FkbM DDI_RS20575 edff6163fab7ad51a6f48f40ba410ff3 258 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS20575 edff6163fab7ad51a6f48f40ba410ff3 258 SUPERFAMILY SSF52540 3 216 3.59E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20575 edff6163fab7ad51a6f48f40ba410ff3 258 Gene3D G3DSA:3.40.50.300 1 223 2.3E-57 T 28-03-2018 DDI_RS20575 edff6163fab7ad51a6f48f40ba410ff3 258 SMART SM00382 28 218 5.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20575 edff6163fab7ad51a6f48f40ba410ff3 258 Pfam PF00005 ABC transporter 19 168 1.8E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06675 384f618c68bb381e490bdd79e2683199 281 Pfam PF03239 Iron permease FTR1 family 1 256 7.1E-68 T 28-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 DDI_RS21545 44b44b61f50b23a12fabcf7976b54513 90 SUPERFAMILY SSF47729 1 90 6.77E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 DDI_RS21545 44b44b61f50b23a12fabcf7976b54513 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DDI_RS21545 44b44b61f50b23a12fabcf7976b54513 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS21545 44b44b61f50b23a12fabcf7976b54513 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS21545 44b44b61f50b23a12fabcf7976b54513 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS21545 44b44b61f50b23a12fabcf7976b54513 90 SMART SM00411 1 90 8.5E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS21545 44b44b61f50b23a12fabcf7976b54513 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.7E-33 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDI_RS21545 44b44b61f50b23a12fabcf7976b54513 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 DDI_RS02725 decdb348a0e64cdccd8454080ba20099 478 Gene3D G3DSA:1.20.1250.20 13 217 2.1E-19 T 28-03-2018 DDI_RS02725 decdb348a0e64cdccd8454080ba20099 478 Pfam PF13347 MFS/sugar transport protein 14 441 2.1E-102 T 28-03-2018 DDI_RS02725 decdb348a0e64cdccd8454080ba20099 478 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 63 88 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 DDI_RS02725 decdb348a0e64cdccd8454080ba20099 478 SUPERFAMILY SSF103473 13 435 2.49E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS02725 decdb348a0e64cdccd8454080ba20099 478 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 12 454 1.2E-119 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 DDI_RS02725 decdb348a0e64cdccd8454080ba20099 478 Gene3D G3DSA:1.20.1250.20 218 435 4.9E-11 T 28-03-2018 DDI_RS06375 8e0b7fc485c64919a87eeccaa23e4760 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 219 1.2E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06375 8e0b7fc485c64919a87eeccaa23e4760 223 SUPERFAMILY SSF161098 12 206 2.75E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06375 8e0b7fc485c64919a87eeccaa23e4760 223 Gene3D G3DSA:1.10.3720.10 6 222 3.7E-34 T 28-03-2018 DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 SUPERFAMILY SSF52540 6 225 1.33E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 SMART SM00382 32 220 5.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 SMART SM00382 281 476 2.6E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 Pfam PF00005 ABC transporter 23 172 1.5E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 Pfam PF00005 ABC transporter 274 427 1.4E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 Gene3D G3DSA:3.40.50.300 266 505 9.6E-37 T 28-03-2018 DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 Gene3D G3DSA:3.40.50.300 4 238 2.7E-53 T 28-03-2018 DDI_RS09250 3e46bcfe88cb5f84015d26d11dde20c2 507 SUPERFAMILY SSF52540 272 486 2.71E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02710 5115d7369b6cd96585f5d9af999cb6b9 181 Gene3D G3DSA:3.40.630.30 1 179 5.0E-27 T 28-03-2018 DDI_RS02710 5115d7369b6cd96585f5d9af999cb6b9 181 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 2.2E-29 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS02710 5115d7369b6cd96585f5d9af999cb6b9 181 SUPERFAMILY SSF55729 2 154 5.97E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS11645 44bcc5fa0c9b9d1049aa291094264a15 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 103 128 7.4E-11 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DDI_RS11645 44bcc5fa0c9b9d1049aa291094264a15 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 71 93 7.4E-11 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DDI_RS11645 44bcc5fa0c9b9d1049aa291094264a15 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 47 70 7.4E-11 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DDI_RS11645 44bcc5fa0c9b9d1049aa291094264a15 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 23 46 7.4E-11 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DDI_RS11645 44bcc5fa0c9b9d1049aa291094264a15 271 SUPERFAMILY SSF54001 6 262 4.17E-66 T 28-03-2018 DDI_RS11645 44bcc5fa0c9b9d1049aa291094264a15 271 Pfam PF00797 N-acetyltransferase 26 255 1.4E-62 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DDI_RS11645 44bcc5fa0c9b9d1049aa291094264a15 271 Gene3D G3DSA:3.30.2140.10 143 271 4.8E-25 T 28-03-2018 DDI_RS11645 44bcc5fa0c9b9d1049aa291094264a15 271 Gene3D G3DSA:3.30.2140.10 1 142 2.7E-33 T 28-03-2018 DDI_RS16560 31d55d9723a0703a3001392297942358 227 Gene3D G3DSA:3.40.50.720 2 227 1.2E-53 T 28-03-2018 DDI_RS16560 31d55d9723a0703a3001392297942358 227 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 225 3.4E-34 T 28-03-2018 DDI_RS16560 31d55d9723a0703a3001392297942358 227 SUPERFAMILY SSF51735 5 226 1.84E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS16560 31d55d9723a0703a3001392297942358 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 1.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS16560 31d55d9723a0703a3001392297942358 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 156 1.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS16560 31d55d9723a0703a3001392297942358 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS16560 31d55d9723a0703a3001392297942358 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 1.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS16560 31d55d9723a0703a3001392297942358 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 128 1.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS16560 31d55d9723a0703a3001392297942358 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 209 1.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 PRINTS PR00988 Uridine kinase signature 87 102 1.6E-37 T 28-03-2018 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 PRINTS PR00988 Uridine kinase signature 8 25 1.6E-37 T 28-03-2018 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 PRINTS PR00988 Uridine kinase signature 143 153 1.6E-37 T 28-03-2018 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 PRINTS PR00988 Uridine kinase signature 157 168 1.6E-37 T 28-03-2018 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 PRINTS PR00988 Uridine kinase signature 42 53 1.6E-37 T 28-03-2018 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 PRINTS PR00988 Uridine kinase signature 179 192 1.6E-37 T 28-03-2018 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 SUPERFAMILY SSF52540 6 205 3.66E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 8.6E-43 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 40.793 T 28-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 Gene3D G3DSA:3.40.50.300 4 213 3.9E-56 T 28-03-2018 DDI_RS05335 acb7a8d38d656ce90ecf3fe967620f96 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 2.3E-93 T 28-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 Gene3D G3DSA:1.10.40.60 100 235 6.3E-30 T 28-03-2018 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 PIRSF PIRSF002786 1 126 1.2E-29 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 PIRSF PIRSF002786 133 343 5.3E-37 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 SUPERFAMILY SSF158544 102 117 8.11E-28 T 28-03-2018 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 SUPERFAMILY SSF158544 146 233 8.11E-28 T 28-03-2018 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 SUPERFAMILY SSF54523 36 101 2.04E-26 T 28-03-2018 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 SUPERFAMILY SSF54523 302 340 2.04E-26 T 28-03-2018 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 Pfam PF03934 Type II secretion system (T2SS), protein K 32 330 3.3E-90 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 SUPERFAMILY SSF158544 236 293 3.66E-17 T 28-03-2018 DDI_RS13130 b47aeb124e015e0a441a134e266fc3dc 346 Gene3D G3DSA:1.10.40.60 237 299 3.1E-19 T 28-03-2018 DDI_RS07955 2fcaa03248a0561c83b6ce2df5f56d37 240 SUPERFAMILY SSF55469 3 239 1.01E-69 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDI_RS07955 2fcaa03248a0561c83b6ce2df5f56d37 240 Gene3D G3DSA:3.40.109.10 1 240 2.3E-55 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDI_RS07955 2fcaa03248a0561c83b6ce2df5f56d37 240 PIRSF PIRSF005426 1 240 3.2E-83 T 28-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 DDI_RS07955 2fcaa03248a0561c83b6ce2df5f56d37 240 Pfam PF00881 Nitroreductase family 8 159 1.1E-15 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DDI_RS08515 506e3f201e64eb4a62c414f19929be3b 307 SUPERFAMILY SSF55347 123 267 8.17E-40 T 28-03-2018 DDI_RS08515 506e3f201e64eb4a62c414f19929be3b 307 Gene3D G3DSA:3.40.50.720 1 132 3.7E-39 T 28-03-2018 DDI_RS08515 506e3f201e64eb4a62c414f19929be3b 307 SUPERFAMILY SSF51735 4 136 5.11E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS08515 506e3f201e64eb4a62c414f19929be3b 307 Gene3D G3DSA:3.30.360.10 133 307 7.7E-18 T 28-03-2018 DDI_RS08515 506e3f201e64eb4a62c414f19929be3b 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 4.0E-28 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDI_RS10505 45e31c142eb4ca43c8e177a54d6b5ced 343 Gene3D G3DSA:3.20.20.210 1 343 3.5E-86 T 28-03-2018 DDI_RS10505 45e31c142eb4ca43c8e177a54d6b5ced 343 PIRSF PIRSF005632 1 343 2.8E-196 T 28-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit DDI_RS10505 45e31c142eb4ca43c8e177a54d6b5ced 343 SUPERFAMILY SSF51726 7 340 1.01E-65 T 28-03-2018 DDI_RS10505 45e31c142eb4ca43c8e177a54d6b5ced 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 327 1.8E-34 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDI_RS07335 08bd24a9a2481386bbeb051a5e29d788 621 Pfam PF01432 Peptidase family M3 150 553 2.2E-22 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DDI_RS07335 08bd24a9a2481386bbeb051a5e29d788 621 Gene3D G3DSA:1.10.1370.10 337 566 2.5E-27 T 28-03-2018 DDI_RS07335 08bd24a9a2481386bbeb051a5e29d788 621 Gene3D G3DSA:1.10.1370.10 36 326 8.0E-24 T 28-03-2018 DDI_RS07335 08bd24a9a2481386bbeb051a5e29d788 621 SUPERFAMILY SSF55486 2 554 8.79E-69 T 28-03-2018 DDI_RS00545 95b493076ae93738f0140d25dd912cb7 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 5.5E-113 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDI_RS00545 95b493076ae93738f0140d25dd912cb7 383 Gene3D G3DSA:1.20.1090.10 184 383 7.8E-61 T 28-03-2018 DDI_RS00545 95b493076ae93738f0140d25dd912cb7 383 Gene3D G3DSA:3.40.50.1970 8 183 3.2E-40 T 28-03-2018 DDI_RS00545 95b493076ae93738f0140d25dd912cb7 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS00545 95b493076ae93738f0140d25dd912cb7 383 SUPERFAMILY SSF56796 3 382 2.09E-117 T 28-03-2018 DDI_RS00545 95b493076ae93738f0140d25dd912cb7 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.4E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.4E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.4E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.4E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.4E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 1.6E-129 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 SUPERFAMILY SSF160544 251 355 1.44E-42 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 Gene3D G3DSA:3.40.1690.10 218 353 9.1E-60 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DDI_RS12135 53575d5bec25dc0a6b6716bcebcd4883 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 4.0E-137 T 28-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 DDI_RS13525 0568d1d0f3128a0cd05faa7ea2324104 75 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 26 54 2.0E-4 T 28-03-2018 IPR022576 Protein of unknown function DUF2633 DDI_RS13525 0568d1d0f3128a0cd05faa7ea2324104 75 Pfam PF11119 Protein of unknown function (DUF2633) 14 60 5.5E-17 T 28-03-2018 IPR022576 Protein of unknown function DUF2633 DDI_RS03925 5ff80ade8cc2469c8e9936b8b9ca3d03 86 Gene3D G3DSA:3.10.20.30 4 86 5.4E-4 T 28-03-2018 IPR012675 Beta-grasp domain DDI_RS03925 5ff80ade8cc2469c8e9936b8b9ca3d03 86 SUPERFAMILY SSF54285 15 86 2.03E-6 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DDI_RS19975 fa66b3d702005328371560f9507a2e5f 206 Gene3D G3DSA:3.40.50.150 1 206 2.1E-33 T 28-03-2018 DDI_RS19975 fa66b3d702005328371560f9507a2e5f 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.114 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DDI_RS19975 fa66b3d702005328371560f9507a2e5f 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 1.9E-60 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DDI_RS19975 fa66b3d702005328371560f9507a2e5f 206 PIRSF PIRSF003078 1 206 1.0E-61 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DDI_RS19975 fa66b3d702005328371560f9507a2e5f 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 24 204 3.8E-56 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DDI_RS19975 fa66b3d702005328371560f9507a2e5f 206 SUPERFAMILY SSF53335 3 204 6.19E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS06325 4b30c736c898f7946df1615351238cad 279 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 199 277 4.9E-22 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 DDI_RS06325 4b30c736c898f7946df1615351238cad 279 PRINTS PR01374 Gram-negative bacterial tonB protein signature 135 145 6.7E-6 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDI_RS06325 4b30c736c898f7946df1615351238cad 279 PRINTS PR01374 Gram-negative bacterial tonB protein signature 216 234 6.7E-6 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDI_RS06325 4b30c736c898f7946df1615351238cad 279 PRINTS PR01374 Gram-negative bacterial tonB protein signature 195 216 6.7E-6 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDI_RS06325 4b30c736c898f7946df1615351238cad 279 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 201 278 1.8E-23 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 DDI_RS06325 4b30c736c898f7946df1615351238cad 279 SUPERFAMILY SSF74653 193 275 7.85E-23 T 28-03-2018 DDI_RS06325 4b30c736c898f7946df1615351238cad 279 Gene3D G3DSA:3.30.1150.10 98 279 6.0E-22 T 28-03-2018 DDI_RS00740 bcb7a41983205b340a44101a7d142168 355 PIRSF PIRSF000443 13 355 1.8E-63 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 DDI_RS00740 bcb7a41983205b340a44101a7d142168 355 Pfam PF00561 alpha/beta hydrolase fold 63 321 4.9E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS00740 bcb7a41983205b340a44101a7d142168 355 SUPERFAMILY SSF53474 31 331 4.57E-61 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS00740 bcb7a41983205b340a44101a7d142168 355 Gene3D G3DSA:3.40.50.1820 18 350 5.9E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.5E-74 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 Gene3D G3DSA:3.40.50.300 277 376 6.4E-23 T 28-03-2018 DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 Gene3D G3DSA:3.40.50.300 1 142 3.1E-24 T 28-03-2018 DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 Gene3D G3DSA:3.40.50.300 143 276 4.0E-30 T 28-03-2018 DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 3.4E-71 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 SUPERFAMILY SSF52540 2 636 2.07E-163 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.061 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 DDI_RS18885 203d48954364ce812651bbb7c9fb679e 674 Gene3D G3DSA:1.10.486.10 377 551 4.9E-38 T 28-03-2018 DDI_RS11125 8f3d453f5435b4d73ba05f0e3e160b30 71 Pfam PF05433 Glycine zipper 2TM domain 33 68 2.1E-6 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 SMART SM00283 269 516 6.8E-88 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 Gene3D G3DSA:1.10.287.950 324 520 1.4E-46 T 28-03-2018 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 Gene3D G3DSA:1.10.287.950 51 323 7.7E-15 T 28-03-2018 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 173 4.9E-16 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 SUPERFAMILY SSF58104 237 517 4.19E-69 T 28-03-2018 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 9.8E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.1E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.1E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.1E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS19295 6d1b2265d203ff73eec9502c42079351 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.1E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS20415 4fb331e533ef426d999cc02ce1d58cd4 404 Gene3D G3DSA:3.40.50.1110 47 401 1.1E-35 T 28-03-2018 DDI_RS20415 4fb331e533ef426d999cc02ce1d58cd4 404 SUPERFAMILY SSF52266 70 125 4.68E-5 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS20415 4fb331e533ef426d999cc02ce1d58cd4 404 SUPERFAMILY SSF52266 219 400 2.6E-24 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS20415 4fb331e533ef426d999cc02ce1d58cd4 404 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 225 386 1.4E-14 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS10560 632df135abc886574d9c1346cf66e2ba 239 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 161 5.3E-43 T 28-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 DDI_RS10560 632df135abc886574d9c1346cf66e2ba 239 Gene3D G3DSA:1.10.3480.10 2 177 4.3E-28 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS10560 632df135abc886574d9c1346cf66e2ba 239 Pfam PF02613 Nitrate reductase delta subunit 39 122 4.0E-7 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS10560 632df135abc886574d9c1346cf66e2ba 239 SUPERFAMILY SSF89155 3 164 5.89E-29 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone DDI_RS05895 2b49e660f8e53334ca54f7da6a27d112 216 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 13 197 7.0E-54 T 28-03-2018 DDI_RS05895 2b49e660f8e53334ca54f7da6a27d112 216 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 128 211 3.7E-10 T 28-03-2018 DDI_RS09270 30622d0ae602feedd847281e1a0c6b00 331 PIRSF PIRSF026166 1 329 5.5E-130 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter DDI_RS09270 30622d0ae602feedd847281e1a0c6b00 331 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 318 3.9E-101 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter DDI_RS19760 159fddbdf2b66a04199e4aecf7255010 230 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 5.9E-22 T 28-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 DDI_RS19760 159fddbdf2b66a04199e4aecf7255010 230 Gene3D G3DSA:3.40.1280.10 1 190 2.5E-45 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS19760 159fddbdf2b66a04199e4aecf7255010 230 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 37.223 T 28-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 DDI_RS19760 159fddbdf2b66a04199e4aecf7255010 230 SUPERFAMILY SSF75217 3 182 5.82E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS19760 159fddbdf2b66a04199e4aecf7255010 230 Pfam PF00588 SpoU rRNA Methylase family 20 159 8.9E-35 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 Gene3D G3DSA:1.20.120.30 19 182 7.4E-27 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 Gene3D G3DSA:1.10.287.1060 235 320 0.038 T 28-03-2018 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 417 6.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 24 6.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 436 465 6.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 282 311 6.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 359 386 6.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 Gene3D G3DSA:1.10.287.950 321 512 6.7E-49 T 28-03-2018 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 SUPERFAMILY SSF58104 228 509 3.27E-74 T 28-03-2018 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 SMART SM00283 261 508 3.2E-87 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 SMART SM00304 435 505 110.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 SMART SM00304 208 260 2.3E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 474 1.2E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 Pfam PF00672 HAMP domain 208 256 1.1E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS12440 7b884ce43199c1193e78ccd5771f4f2f 532 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 181 2.7E-35 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS16850 6dd656509083a0a5f8c7ed9b4df15482 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 2.6E-144 T 28-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 DDI_RS16850 6dd656509083a0a5f8c7ed9b4df15482 327 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 119 136 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 DDI_RS16850 6dd656509083a0a5f8c7ed9b4df15482 327 Gene3D G3DSA:3.40.190.10 136 274 2.0E-33 T 28-03-2018 DDI_RS16850 6dd656509083a0a5f8c7ed9b4df15482 327 SUPERFAMILY SSF53850 21 323 2.39E-65 T 28-03-2018 DDI_RS16850 6dd656509083a0a5f8c7ed9b4df15482 327 Pfam PF01547 Bacterial extracellular solute-binding protein 41 270 3.1E-19 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 DDI_RS16850 6dd656509083a0a5f8c7ed9b4df15482 327 Gene3D G3DSA:3.40.190.10 16 135 2.1E-4 T 28-03-2018 DDI_RS16850 6dd656509083a0a5f8c7ed9b4df15482 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 6 327 1.3E-167 T 28-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 DDI_RS05675 a02d94821db571a31c55e7414c9c7c69 152 SUPERFAMILY SSF54427 22 140 2.15E-16 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS05675 a02d94821db571a31c55e7414c9c7c69 152 Pfam PF13474 SnoaL-like domain 36 138 2.2E-7 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain DDI_RS05675 a02d94821db571a31c55e7414c9c7c69 152 Gene3D G3DSA:3.10.450.50 10 142 6.5E-13 T 28-03-2018 DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 1.3E-202 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 Gene3D G3DSA:2.160.10.10 245 321 8.9E-17 T 28-03-2018 DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.116 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 5.3E-7 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 8.3E-8 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 322 351 0.0023 T 28-03-2018 IPR001451 Hexapeptide repeat DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 SUPERFAMILY SSF53448 6 252 1.42E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 7.4E-22 T 28-03-2018 IPR025877 MobA-like NTP transferase DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 Gene3D G3DSA:3.90.550.10 1 244 5.6E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 SUPERFAMILY SSF51161 255 440 2.61E-51 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS20030 84ab74953214bec55532b98d82ef30d2 456 Gene3D G3DSA:2.160.10.10 322 441 3.1E-32 T 28-03-2018 DDI_RS19685 0160454ba3f9e77744ea25ba257e20da 426 SUPERFAMILY SSF53850 26 422 9.88E-54 T 28-03-2018 DDI_RS19685 0160454ba3f9e77744ea25ba257e20da 426 Gene3D G3DSA:3.40.190.10 28 208 1.4E-28 T 28-03-2018 DDI_RS19685 0160454ba3f9e77744ea25ba257e20da 426 Pfam PF13416 Bacterial extracellular solute-binding protein 47 362 1.9E-38 T 28-03-2018 DDI_RS19685 0160454ba3f9e77744ea25ba257e20da 426 Gene3D G3DSA:3.40.190.10 209 380 3.4E-11 T 28-03-2018 DDI_RS01940 af8583499265fa7aa6cb0069724c1349 302 Pfam PF04865 Baseplate J-like protein 118 261 1.0E-28 T 28-03-2018 IPR006949 Baseplate protein J-like DDI_RS01940 af8583499265fa7aa6cb0069724c1349 302 PIRSF PIRSF020481 1 302 4.2E-125 T 28-03-2018 IPR014507 Baseplate assembly protein J, predicted DDI_RS09825 73a489f7d5c629fd9f8692c966f0427c 115 Gene3D G3DSA:3.30.1330.40 2 115 1.2E-23 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DDI_RS09825 73a489f7d5c629fd9f8692c966f0427c 115 Pfam PF01042 Endoribonuclease L-PSP 4 114 9.3E-26 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family DDI_RS09825 73a489f7d5c629fd9f8692c966f0427c 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 28-03-2018 IPR019897 RidA, conserved site DDI_RS09825 73a489f7d5c629fd9f8692c966f0427c 115 SUPERFAMILY SSF55298 2 114 1.57E-28 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DDI_RS11665 396ffab91f284de7e34c078a27244204 357 SUPERFAMILY SSF53822 73 339 3.62E-42 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS11665 396ffab91f284de7e34c078a27244204 357 Gene3D G3DSA:3.40.50.2300 67 174 3.2E-12 T 28-03-2018 DDI_RS11665 396ffab91f284de7e34c078a27244204 357 Gene3D G3DSA:1.10.10.60 1 19 0.0012 T 28-03-2018 DDI_RS11665 396ffab91f284de7e34c078a27244204 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 44 2.5E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS11665 396ffab91f284de7e34c078a27244204 357 Gene3D G3DSA:3.40.50.2300 175 320 2.6E-30 T 28-03-2018 DDI_RS11665 396ffab91f284de7e34c078a27244204 357 Pfam PF13377 Periplasmic binding protein-like domain 173 337 3.9E-29 T 28-03-2018 DDI_RS11665 396ffab91f284de7e34c078a27244204 357 SUPERFAMILY SSF47413 5 59 4.56E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS11665 396ffab91f284de7e34c078a27244204 357 SMART SM00354 4 64 0.0011 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS11665 396ffab91f284de7e34c078a27244204 357 Gene3D G3DSA:1.10.260.40 20 64 4.2E-11 T 28-03-2018 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 SUPERFAMILY SSF116878 379 454 9.15E-52 T 28-03-2018 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 SUPERFAMILY SSF116878 121 220 9.15E-52 T 28-03-2018 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 Gene3D G3DSA:3.30.1360.120 1 121 4.4E-41 T 28-03-2018 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 Pfam PF01926 50S ribosome-binding GTPase 218 307 1.7E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 6.5E-35 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 9.6E-22 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 3.1E-98 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 Gene3D G3DSA:1.20.120.430 282 454 2.6E-35 T 28-03-2018 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 Gene3D G3DSA:1.20.120.430 122 281 5.8E-28 T 28-03-2018 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.1 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 Pfam PF12631 MnmE helical domain 123 451 2.7E-60 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 SUPERFAMILY SSF52540 72 152 5.04E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20305 2b8edbae3765b421d9bfa7069e10920b 454 SUPERFAMILY SSF52540 188 372 5.04E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10240 a18e6929722f506a6a172325755fcb9b 340 Pfam PF04877 HrpZ 1 300 6.4E-59 T 28-03-2018 IPR006961 Harpin, HrpN/Z DDI_RS08995 7b9d413248740a64c9160037a7c7c300 303 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 1.0E-113 T 28-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DDI_RS08995 7b9d413248740a64c9160037a7c7c300 303 Pfam PF00483 Nucleotidyl transferase 10 275 4.0E-27 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DDI_RS08995 7b9d413248740a64c9160037a7c7c300 303 SUPERFAMILY SSF53448 9 287 2.07E-62 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS08995 7b9d413248740a64c9160037a7c7c300 303 Gene3D G3DSA:3.90.550.10 1 302 2.9E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS02270 0ce57a160287f13f415533d138b2986b 1034 Pfam PF04851 Type III restriction enzyme, res subunit 286 458 1.6E-21 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DDI_RS02270 0ce57a160287f13f415533d138b2986b 1034 Gene3D G3DSA:3.40.50.300 536 740 4.1E-7 T 28-03-2018 DDI_RS02270 0ce57a160287f13f415533d138b2986b 1034 SUPERFAMILY SSF52540 257 516 1.19E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02270 0ce57a160287f13f415533d138b2986b 1034 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 177 2.4E-25 T 28-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 DDI_RS02270 0ce57a160287f13f415533d138b2986b 1034 SMART SM00487 283 495 0.0022 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDI_RS02270 0ce57a160287f13f415533d138b2986b 1034 Gene3D G3DSA:3.40.50.300 282 469 7.6E-13 T 28-03-2018 DDI_RS02270 0ce57a160287f13f415533d138b2986b 1034 SUPERFAMILY SSF52540 602 713 2.8E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02270 0ce57a160287f13f415533d138b2986b 1034 SUPERFAMILY SSF52540 309 365 2.8E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 28-03-2018 IPR027486 Ribosomal protein S10 domain DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 28-03-2018 IPR027486 Ribosomal protein S10 domain DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain DDI_RS18100 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 1.4E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain DDI_RS07505 6fb0a02acdfa6a9c19e89e2467e432e8 121 Pfam PF09394 Chagasin family peptidase inhibitor I42 30 114 1.1E-24 T 28-03-2018 IPR018990 Proteinase inhibitor I42, chagasin DDI_RS07505 6fb0a02acdfa6a9c19e89e2467e432e8 121 SUPERFAMILY SSF141066 20 112 6.02E-25 T 28-03-2018 IPR018990 Proteinase inhibitor I42, chagasin DDI_RS11860 3742aadb3c54e6fa6691fd7b0e5ac435 505 Pfam PF03929 PepSY-associated TM region 44 440 1.4E-64 T 28-03-2018 IPR005625 PepSY-associated TM protein DDI_RS14140 5848ec086c231a2bc6f398da1b3fc934 382 Gene3D G3DSA:1.20.1250.20 4 193 8.3E-10 T 28-03-2018 DDI_RS14140 5848ec086c231a2bc6f398da1b3fc934 382 Pfam PF12832 MFS_1 like family 8 357 1.6E-47 T 28-03-2018 IPR024989 Major facilitator superfamily associated domain DDI_RS14140 5848ec086c231a2bc6f398da1b3fc934 382 Gene3D G3DSA:1.20.1250.20 194 375 2.8E-12 T 28-03-2018 DDI_RS14140 5848ec086c231a2bc6f398da1b3fc934 382 PIRSF PIRSF004925 1 382 4.4E-109 T 28-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter DDI_RS14140 5848ec086c231a2bc6f398da1b3fc934 382 SUPERFAMILY SSF103473 7 373 1.22E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS03880 f37ca3d2fda0a4e036531b8125326b2c 192 Gene3D G3DSA:3.90.280.10 17 190 2.6E-51 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein DDI_RS03880 f37ca3d2fda0a4e036531b8125326b2c 192 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 48 187 2.2E-38 T 28-03-2018 IPR005247 YbhB/YbcL DDI_RS03880 f37ca3d2fda0a4e036531b8125326b2c 192 Pfam PF01161 Phosphatidylethanolamine-binding protein 42 187 7.9E-37 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein DDI_RS03880 f37ca3d2fda0a4e036531b8125326b2c 192 SUPERFAMILY SSF49777 29 189 1.44E-50 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein DDI_RS21510 b9aa6160015906063184c5e7672e09f7 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 19 201 4.8E-54 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DDI_RS21510 b9aa6160015906063184c5e7672e09f7 211 Gene3D G3DSA:3.20.20.70 7 207 1.1E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS21510 b9aa6160015906063184c5e7672e09f7 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 1 207 20.55 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DDI_RS21510 b9aa6160015906063184c5e7672e09f7 211 Pfam PF02581 Thiamine monophosphate synthase 19 189 7.5E-54 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DDI_RS21510 b9aa6160015906063184c5e7672e09f7 211 SUPERFAMILY SSF51391 6 207 7.98E-63 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DDI_RS20470 a69e3e34f9e6d6c5db35178a71a7438b 98 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 3 91 3.9E-33 T 28-03-2018 IPR024476 Protein of unknown function DUF3861 DDI_RS17440 20b469889e668d38a32c22a7731ae435 306 SMART SM00062 62 291 3.8E-18 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS17440 20b469889e668d38a32c22a7731ae435 306 Gene3D G3DSA:3.40.190.10 58 192 4.8E-19 T 28-03-2018 DDI_RS17440 20b469889e668d38a32c22a7731ae435 306 SUPERFAMILY SSF53850 58 289 1.09E-39 T 28-03-2018 DDI_RS17440 20b469889e668d38a32c22a7731ae435 306 Gene3D G3DSA:3.40.190.10 193 303 4.3E-10 T 28-03-2018 DDI_RS17440 20b469889e668d38a32c22a7731ae435 306 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 64 288 3.0E-31 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS16255 92a251852c2f03935388b90dbbded8af 235 PIRSF PIRSF028111 3 235 9.1E-76 T 28-03-2018 IPR016868 Bacteriophage B3, Orf5 DDI_RS16255 92a251852c2f03935388b90dbbded8af 235 Pfam PF10979 Protein of unknown function (DUF2786) 8 46 1.1E-13 T 28-03-2018 IPR024498 Domain of unknown function DUF2786 DDI_RS20605 861fb484ccfbd0b987371192f6f78dce 176 SUPERFAMILY SSF158668 5 170 1.31E-57 T 28-03-2018 DDI_RS20605 861fb484ccfbd0b987371192f6f78dce 176 Gene3D G3DSA:1.20.120.330 6 170 1.5E-56 T 28-03-2018 DDI_RS20605 861fb484ccfbd0b987371192f6f78dce 176 Pfam PF05068 Mannitol repressor 8 170 4.3E-64 T 28-03-2018 IPR007761 Mannitol repressor MtlR-like DDI_RS20735 1804effe79b4f6a6e5676de96c73ad64 362 Gene3D G3DSA:3.40.50.1820 97 350 9.6E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS20735 1804effe79b4f6a6e5676de96c73ad64 362 SUPERFAMILY SSF53474 107 326 1.68E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS20735 1804effe79b4f6a6e5676de96c73ad64 362 Pfam PF12697 Alpha/beta hydrolase family 125 271 1.1E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 Gene3D G3DSA:3.40.50.300 1 242 8.4E-73 T 28-03-2018 DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 Pfam PF08402 TOBE domain 278 350 3.1E-7 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 Pfam PF00005 ABC transporter 20 161 4.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 SUPERFAMILY SSF52540 4 243 2.43E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 SMART SM00382 28 211 4.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 SUPERFAMILY SSF50331 236 358 5.78E-28 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 Gene3D G3DSA:2.40.50.100 243 288 4.4E-7 T 28-03-2018 DDI_RS16470 d1dec82498fd5a00e2857b1c281f8e7e 366 Gene3D G3DSA:2.40.50.140 289 343 2.0E-10 T 28-03-2018 DDI_RS17340 199bf58db169b97ddfc98c995c81e1c6 312 Gene3D G3DSA:3.40.50.720 3 164 1.8E-13 T 28-03-2018 DDI_RS17340 199bf58db169b97ddfc98c995c81e1c6 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 230 3.9E-39 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS17340 199bf58db169b97ddfc98c995c81e1c6 312 SUPERFAMILY SSF51735 3 308 7.03E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS17340 199bf58db169b97ddfc98c995c81e1c6 312 Gene3D G3DSA:3.90.25.10 165 312 3.2E-22 T 28-03-2018 DDI_RS21075 d65b76ef030a2ffa13e29d0a6d97dcd9 152 Gene3D G3DSA:2.70.40.10 2 116 2.0E-39 T 28-03-2018 DDI_RS21075 d65b76ef030a2ffa13e29d0a6d97dcd9 152 Pfam PF00692 dUTPase 17 150 2.3E-42 T 28-03-2018 IPR029054 dUTPase-like DDI_RS21075 d65b76ef030a2ffa13e29d0a6d97dcd9 152 SUPERFAMILY SSF51283 1 151 4.45E-55 T 28-03-2018 IPR029054 dUTPase-like DDI_RS21075 d65b76ef030a2ffa13e29d0a6d97dcd9 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 151 2.4E-48 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 DDI_RS21075 d65b76ef030a2ffa13e29d0a6d97dcd9 152 Gene3D G3DSA:2.70.40.10 117 151 7.3E-15 T 28-03-2018 DDI_RS21075 d65b76ef030a2ffa13e29d0a6d97dcd9 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 33.648 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 DDI_RS13770 350357b51ea27ccddb27c1b98c979b2e 306 SUPERFAMILY SSF158544 197 249 5.49E-8 T 28-03-2018 DDI_RS13770 350357b51ea27ccddb27c1b98c979b2e 306 Gene3D G3DSA:3.30.1300.30 28 133 6.3E-9 T 28-03-2018 DDI_RS13770 350357b51ea27ccddb27c1b98c979b2e 306 Gene3D G3DSA:1.10.40.60 198 249 9.4E-4 T 28-03-2018 DDI_RS13770 350357b51ea27ccddb27c1b98c979b2e 306 Pfam PF03934 Type II secretion system (T2SS), protein K 41 115 3.6E-8 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 DDI_RS06225 4bd8367bb5295a94d3a644c1a2e8516d 213 Gene3D G3DSA:1.20.950.20 1 213 5.9E-54 T 28-03-2018 DDI_RS06225 4bd8367bb5295a94d3a644c1a2e8516d 213 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 2.8E-64 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 DDI_RS06225 4bd8367bb5295a94d3a644c1a2e8516d 213 SUPERFAMILY SSF81342 3 208 5.18E-52 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DDI_RS06225 4bd8367bb5295a94d3a644c1a2e8516d 213 Pfam PF01292 Prokaryotic cytochrome b561 12 186 1.8E-20 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DDI_RS21540 5c0d8f8aca09a85c4df928d83f38b852 196 Pfam PF04222 Protein of unknown function (DUF416) 5 192 1.3E-79 T 28-03-2018 IPR007338 Protein of unknown function DUF416 DDI_RS21540 5c0d8f8aca09a85c4df928d83f38b852 196 Gene3D G3DSA:1.20.1590.10 5 194 4.4E-76 T 28-03-2018 IPR023381 YP001051499.1-like domain DDI_RS09335 a0df419fc34a3fa0d87f0c77f5c8b7ca 408 Gene3D G3DSA:3.90.550.10 49 364 3.4E-17 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS09335 a0df419fc34a3fa0d87f0c77f5c8b7ca 408 SUPERFAMILY SSF53448 39 405 1.8E-79 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS04580 a98bf7d60d03a4877b2b59929ecbcc0c 322 Gene3D G3DSA:3.30.390.10 1 110 1.6E-17 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS04580 a98bf7d60d03a4877b2b59929ecbcc0c 322 Pfam PF13378 Enolase C-terminal domain-like 130 273 1.1E-14 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS04580 a98bf7d60d03a4877b2b59929ecbcc0c 322 SMART SM00922 115 209 1.5E-6 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS04580 a98bf7d60d03a4877b2b59929ecbcc0c 322 Gene3D G3DSA:3.20.20.120 111 294 1.8E-35 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS04580 a98bf7d60d03a4877b2b59929ecbcc0c 322 SUPERFAMILY SSF54826 1 99 1.92E-25 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS04580 a98bf7d60d03a4877b2b59929ecbcc0c 322 SUPERFAMILY SSF51604 109 311 9.43E-47 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS04580 a98bf7d60d03a4877b2b59929ecbcc0c 322 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 306 5.0E-106 T 28-03-2018 DDI_RS04580 a98bf7d60d03a4877b2b59929ecbcc0c 322 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 314 23.75 T 28-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 289 0.0022 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 519 545 8.5E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 SMART SM00382 325 517 3.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 SMART SM00382 44 243 3.3E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 SUPERFAMILY SSF52540 294 539 1.28E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 SUPERFAMILY SSF52540 15 264 1.09E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 Pfam PF00005 ABC transporter 36 194 3.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 Pfam PF00005 ABC transporter 317 467 3.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 Gene3D G3DSA:3.40.50.300 292 549 1.1E-70 T 28-03-2018 DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 Gene3D G3DSA:3.40.50.300 12 291 2.0E-72 T 28-03-2018 DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS20490 e43bd92f49a77ba63fdb8acc1129fbfe 550 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS12045 61ec986296532ab769c9b306670b9396 89 PIRSF PIRSF004669 1 89 5.5E-33 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS12045 61ec986296532ab769c9b306670b9396 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 1.6E-32 T 28-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 DDI_RS12045 61ec986296532ab769c9b306670b9396 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 6.1E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS12045 61ec986296532ab769c9b306670b9396 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 6.1E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS12045 61ec986296532ab769c9b306670b9396 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 6.1E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS12045 61ec986296532ab769c9b306670b9396 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-29 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS13600 804c869bbd99b2cd746dcb0c6548b8e5 731 Pfam PF13515 Fusaric acid resistance protein-like 410 529 1.1E-22 T 28-03-2018 DDI_RS13600 804c869bbd99b2cd746dcb0c6548b8e5 731 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 709 0.0 T 28-03-2018 IPR010019 Integral membrane protein, YccS DDI_RS13600 804c869bbd99b2cd746dcb0c6548b8e5 731 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 709 3.1E-276 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK DDI_RS13600 804c869bbd99b2cd746dcb0c6548b8e5 731 Pfam PF12805 FUSC-like inner membrane protein yccS 69 347 5.4E-106 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal DDI_RS19075 23735e5c743ad694274821e2f388f814 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.9E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS19075 23735e5c743ad694274821e2f388f814 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.9E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS19075 23735e5c743ad694274821e2f388f814 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.9E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS19075 23735e5c743ad694274821e2f388f814 71 Pfam PF01197 Ribosomal protein L31 1 64 3.5E-31 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS19075 23735e5c743ad694274821e2f388f814 71 SUPERFAMILY SSF143800 1 66 5.89E-28 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS19075 23735e5c743ad694274821e2f388f814 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 2.6E-34 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS19075 23735e5c743ad694274821e2f388f814 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.348 T 28-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS19075 23735e5c743ad694274821e2f388f814 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS15890 0114845d69712b08fa14d7bc1cee3f61 105 SUPERFAMILY SSF52794 1 104 4.97E-31 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS15890 0114845d69712b08fa14d7bc1cee3f61 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 99 3.5E-19 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDI_RS15890 0114845d69712b08fa14d7bc1cee3f61 105 Gene3D G3DSA:3.40.50.2300 2 105 6.3E-33 T 28-03-2018 DDI_RS03665 9ac59d484a1d66725b0f9091f140f3ee 128 Pfam PF04241 Protein of unknown function (DUF423) 20 106 2.4E-24 T 28-03-2018 IPR006696 Protein of unknown function DUF423 DDI_RS19715 5293e9a335351ded268f4df17d856f0c 213 Pfam PF14518 Iron-containing redox enzyme 39 197 8.1E-8 T 28-03-2018 IPR028201 PqqC-like protein DDI_RS19715 5293e9a335351ded268f4df17d856f0c 213 Gene3D G3DSA:1.20.910.10 1 213 6.5E-23 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DDI_RS19715 5293e9a335351ded268f4df17d856f0c 213 SUPERFAMILY SSF48613 1 211 1.1E-37 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DDI_RS05620 a75e95d7e23df43f67b04d5329af5fce 190 SUPERFAMILY SSF52218 1 181 8.0E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS05620 a75e95d7e23df43f67b04d5329af5fce 190 Gene3D G3DSA:3.40.50.360 1 182 4.1E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS05620 a75e95d7e23df43f67b04d5329af5fce 190 Pfam PF02525 Flavodoxin-like fold 2 175 6.0E-38 T 28-03-2018 IPR003680 Flavodoxin-like fold DDI_RS05550 2db8f76e216511ddbb47decae2cf98e3 298 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 292 3.2E-94 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 Gene3D G3DSA:1.10.645.10 391 542 4.3E-31 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 Gene3D G3DSA:1.10.645.10 181 390 1.1E-42 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 43 159 2.6E-24 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 SUPERFAMILY SSF143243 16 200 1.7E-44 T 28-03-2018 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 301 472 1.2E-40 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 477 543 1.1E-10 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 Pfam PF00374 Nickel-dependent hydrogenase 224 292 6.8E-12 T 28-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 SUPERFAMILY SSF56762 199 543 2.09E-108 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 94 139 2.0E-15 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05885 5a18a10febee80053a87cb54a1e731fc 575 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 222 233 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS14380 1b37f680a53a4e94eabb285302202444 244 Pfam PF01925 Sulfite exporter TauE/SafE 8 236 6.7E-11 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DDI_RS08790 fa8beb9a9f080aa0f567a410f6668dd5 227 SUPERFAMILY SSF54060 43 219 1.18E-43 T 28-03-2018 DDI_RS08790 fa8beb9a9f080aa0f567a410f6668dd5 227 Gene3D G3DSA:3.40.570.10 37 223 3.7E-42 T 28-03-2018 DDI_RS08790 fa8beb9a9f080aa0f567a410f6668dd5 227 Pfam PF01223 DNA/RNA non-specific endonuclease 43 206 1.8E-36 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 DDI_RS08790 fa8beb9a9f080aa0f567a410f6668dd5 227 SMART SM00892 48 217 1.3E-23 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 DDI_RS08790 fa8beb9a9f080aa0f567a410f6668dd5 227 SMART SM00477 49 224 9.3E-14 T 28-03-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 DDI_RS01215 a60a80a1a85f109ca48a9ca2245a151d 204 PIRSF PIRSF006806 12 201 2.0E-37 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DDI_RS01215 a60a80a1a85f109ca48a9ca2245a151d 204 SUPERFAMILY SSF100950 17 204 1.33E-57 T 28-03-2018 DDI_RS01215 a60a80a1a85f109ca48a9ca2245a151d 204 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 17 198 1.0E-45 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DDI_RS01215 a60a80a1a85f109ca48a9ca2245a151d 204 Gene3D G3DSA:3.40.50.10420 5 204 6.3E-61 T 28-03-2018 DDI_RS01215 a60a80a1a85f109ca48a9ca2245a151d 204 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 17 198 8.9E-55 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DDI_RS21505 45f95b638ce3f30cfaf74f69516e9924 249 SUPERFAMILY SSF69572 2 246 1.29E-80 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDI_RS21505 45f95b638ce3f30cfaf74f69516e9924 249 Pfam PF00899 ThiF family 10 240 3.2E-64 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDI_RS21505 45f95b638ce3f30cfaf74f69516e9924 249 Gene3D G3DSA:3.40.50.720 1 247 2.7E-71 T 28-03-2018 DDI_RS20105 926b0c2d42581b2cddbafb086dc19e62 190 Pfam PF11659 Protein of unknown function (DUF3261) 51 188 7.6E-39 T 28-03-2018 IPR021675 Protein of unknown function DUF3261 DDI_RS11380 b0999c80a781ed4acec6170f7fb377ae 329 Gene3D G3DSA:3.10.350.10 42 88 1.2E-4 T 28-03-2018 DDI_RS11380 b0999c80a781ed4acec6170f7fb377ae 329 SUPERFAMILY SSF141523 93 147 1.28E-29 T 28-03-2018 DDI_RS11380 b0999c80a781ed4acec6170f7fb377ae 329 SUPERFAMILY SSF141523 175 235 1.28E-29 T 28-03-2018 DDI_RS11380 b0999c80a781ed4acec6170f7fb377ae 329 Pfam PF03734 L,D-transpeptidase catalytic domain 100 234 2.1E-20 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DDI_RS11380 b0999c80a781ed4acec6170f7fb377ae 329 Gene3D G3DSA:2.40.440.10 93 236 2.2E-29 T 28-03-2018 DDI_RS05935 0d656cae2f19eeeebbe1769752059af1 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 117 2.4E-21 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDI_RS05935 0d656cae2f19eeeebbe1769752059af1 329 Gene3D G3DSA:3.40.50.720 1 149 2.6E-32 T 28-03-2018 DDI_RS05935 0d656cae2f19eeeebbe1769752059af1 329 SUPERFAMILY SSF55347 138 291 6.7E-20 T 28-03-2018 DDI_RS05935 0d656cae2f19eeeebbe1769752059af1 329 Gene3D G3DSA:3.30.360.10 150 328 2.2E-19 T 28-03-2018 DDI_RS05935 0d656cae2f19eeeebbe1769752059af1 329 SUPERFAMILY SSF51735 2 153 6.89E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS20185 de201f653d6b551003470b3ae349bec3 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 231 1.1E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20185 de201f653d6b551003470b3ae349bec3 248 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 89 4.9E-18 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS20185 de201f653d6b551003470b3ae349bec3 248 Gene3D G3DSA:1.10.3720.10 17 244 2.0E-41 T 28-03-2018 DDI_RS20185 de201f653d6b551003470b3ae349bec3 248 SUPERFAMILY SSF161098 23 232 2.22E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20095 7e4e9d792540642f1f40bf6d1dbfea70 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 35 189 8.3E-11 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DDI_RS20095 7e4e9d792540642f1f40bf6d1dbfea70 202 SUPERFAMILY SSF89392 22 196 2.75E-24 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DDI_RS20095 7e4e9d792540642f1f40bf6d1dbfea70 202 Gene3D G3DSA:2.50.20.10 19 196 5.2E-20 T 28-03-2018 DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 SMART SM00062 44 268 3.3E-35 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 SUPERFAMILY SSF53850 45 267 7.06E-37 T 28-03-2018 DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 SUPERFAMILY SSF53955 432 448 9.38E-35 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 SUPERFAMILY SSF53955 246 397 9.38E-35 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 Pfam PF01464 Transglycosylase SLT domain 296 402 3.0E-24 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 267 4.8E-32 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 Gene3D G3DSA:1.10.530.10 276 450 1.4E-34 T 28-03-2018 DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 Gene3D G3DSA:3.40.190.10 26 161 8.1E-16 T 28-03-2018 DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 Gene3D G3DSA:3.40.190.10 162 275 9.0E-8 T 28-03-2018 DDI_RS14205 a6d01ddd1924613f690465eedac36552 485 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 465 47.47 T 28-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 DDI_RS02545 2f632c91dbdd1dfdde14336e355c33fa 440 Gene3D G3DSA:3.40.190.10 147 433 1.0E-48 T 28-03-2018 DDI_RS02545 2f632c91dbdd1dfdde14336e355c33fa 440 SUPERFAMILY SSF53850 39 424 2.54E-75 T 28-03-2018 DDI_RS02545 2f632c91dbdd1dfdde14336e355c33fa 440 Pfam PF13416 Bacterial extracellular solute-binding protein 49 364 9.0E-40 T 28-03-2018 DDI_RS13970 78b9a8d09768decb1c4cdcfaad808454 418 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 151 2.7E-8 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DDI_RS13970 78b9a8d09768decb1c4cdcfaad808454 418 SUPERFAMILY SSF56349 98 385 1.0E-58 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS13970 78b9a8d09768decb1c4cdcfaad808454 418 Pfam PF13356 Arm DNA-binding domain 2 89 6.9E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain DDI_RS13970 78b9a8d09768decb1c4cdcfaad808454 418 Gene3D G3DSA:1.10.443.10 202 384 1.2E-25 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS13970 78b9a8d09768decb1c4cdcfaad808454 418 Gene3D G3DSA:1.10.150.130 87 199 1.1E-16 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS13970 78b9a8d09768decb1c4cdcfaad808454 418 Pfam PF00589 Phage integrase family 214 375 1.2E-20 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS11615 85dd91409bcd06f2cd69ba7cb7cd1c56 415 Pfam PF12704 MacB-like periplasmic core domain 28 238 6.5E-16 T 28-03-2018 IPR025857 MacB-like periplasmic core domain DDI_RS11615 85dd91409bcd06f2cd69ba7cb7cd1c56 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 4.4E-214 T 28-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 DDI_RS11615 85dd91409bcd06f2cd69ba7cb7cd1c56 415 Pfam PF02687 FtsX-like permease family 302 408 1.4E-10 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDI_RS11615 85dd91409bcd06f2cd69ba7cb7cd1c56 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 5.0E-156 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 Gene3D G3DSA:3.40.50.300 172 335 4.4E-5 T 28-03-2018 DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 Pfam PF13718 GNAT acetyltransferase 2 376 485 6.5E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 Pfam PF05127 Helicase 195 341 1.6E-37 T 28-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 15 659 48.844 T 28-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 SUPERFAMILY SSF52540 167 290 1.25E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 Gene3D G3DSA:3.40.630.30 356 524 3.1E-14 T 28-03-2018 DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 SUPERFAMILY SSF55729 372 520 1.03E-14 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 Pfam PF17176 tRNA-binding domain 544 661 1.1E-35 T 28-03-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 DDI_RS04750 68c5854069656021ac1e3df87d03b865 672 Pfam PF08351 Domain of unknown function (DUF1726) 65 147 4.8E-7 T 28-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 DDI_RS03795 04e0cfafb458c6eefb8ff4005bdedca7 198 SUPERFAMILY SSF53098 4 196 1.67E-69 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS03795 04e0cfafb458c6eefb8ff4005bdedca7 198 Gene3D G3DSA:3.30.420.10 6 198 9.1E-69 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 DDI_RS03795 04e0cfafb458c6eefb8ff4005bdedca7 198 Pfam PF01351 Ribonuclease HII 14 190 4.5E-39 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain DDI_RS03795 04e0cfafb458c6eefb8ff4005bdedca7 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 38.84 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 DDI_RS08510 1d8aed6d2781c9be02bbccc9f522f58f 214 Gene3D G3DSA:1.10.10.10 97 171 5.0E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08510 1d8aed6d2781c9be02bbccc9f522f58f 214 SUPERFAMILY SSF46785 2 84 4.67E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08510 1d8aed6d2781c9be02bbccc9f522f58f 214 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.5E-62 T 28-03-2018 IPR007432 Protein of unknown function DUF480 DDI_RS08510 1d8aed6d2781c9be02bbccc9f522f58f 214 Gene3D G3DSA:1.10.10.10 2 87 3.1E-37 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08510 1d8aed6d2781c9be02bbccc9f522f58f 214 SUPERFAMILY SSF46785 90 171 1.6E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS08510 1d8aed6d2781c9be02bbccc9f522f58f 214 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 34.495 T 28-03-2018 IPR007432 Protein of unknown function DUF480 DDI_RS21515 63f7c07ab8a48a480dfe798fa36a3b43 655 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 161 615 56.492 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DDI_RS21515 63f7c07ab8a48a480dfe798fa36a3b43 655 Pfam PF01964 Radical SAM ThiC family 162 610 3.1E-201 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DDI_RS21515 63f7c07ab8a48a480dfe798fa36a3b43 655 Pfam PF13667 ThiC-associated domain 41 122 7.2E-32 T 28-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DDI_RS21515 63f7c07ab8a48a480dfe798fa36a3b43 655 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 161 613 1.8E-223 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DDI_RS14775 f38dda1f57c3b15169b6533a76025cc0 517 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 516 1.1E-245 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DDI_RS14775 f38dda1f57c3b15169b6533a76025cc0 517 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 517 224.598 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DDI_RS14775 f38dda1f57c3b15169b6533a76025cc0 517 Pfam PF04262 Glutamate-cysteine ligase 9 380 2.9E-173 T 28-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DDI_RS14775 f38dda1f57c3b15169b6533a76025cc0 517 SUPERFAMILY SSF55931 4 514 1.63E-200 T 28-03-2018 DDI_RS02350 7646c6a393f282879c84808a6d38961a 202 SUPERFAMILY SSF109604 13 193 4.93E-45 T 28-03-2018 DDI_RS02350 7646c6a393f282879c84808a6d38961a 202 Gene3D G3DSA:1.10.3210.10 10 202 2.9E-45 T 28-03-2018 DDI_RS02350 7646c6a393f282879c84808a6d38961a 202 SMART SM00471 40 158 8.1E-4 T 28-03-2018 IPR003607 HD/PDEase domain DDI_RS02350 7646c6a393f282879c84808a6d38961a 202 Pfam PF13023 HD domain 23 184 6.5E-50 T 28-03-2018 IPR006674 HD domain DDI_RS19425 72281f979b970c1380c33973a43ffa4a 67 Gene3D G3DSA:3.30.429.10 2 66 1.1E-28 T 28-03-2018 DDI_RS19425 72281f979b970c1380c33973a43ffa4a 67 Pfam PF01361 Tautomerase enzyme 2 62 1.6E-24 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 DDI_RS19425 72281f979b970c1380c33973a43ffa4a 67 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 5.2E-31 T 28-03-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 DDI_RS19425 72281f979b970c1380c33973a43ffa4a 67 SUPERFAMILY SSF55331 2 66 4.09E-22 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily DDI_RS13745 28443f3dabf402cc2f9a1f6832a6c7ba 492 SUPERFAMILY SSF52540 96 485 6.87E-96 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS13745 28443f3dabf402cc2f9a1f6832a6c7ba 492 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 309 323 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS13745 28443f3dabf402cc2f9a1f6832a6c7ba 492 Pfam PF00437 Type II/IV secretion system protein 116 381 7.5E-87 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 DDI_RS13745 28443f3dabf402cc2f9a1f6832a6c7ba 492 Gene3D G3DSA:3.40.50.300 215 490 9.6E-62 T 28-03-2018 DDI_RS13745 28443f3dabf402cc2f9a1f6832a6c7ba 492 SMART SM00382 242 363 1.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS13745 28443f3dabf402cc2f9a1f6832a6c7ba 492 SUPERFAMILY SSF160246 9 68 4.71E-5 T 28-03-2018 DDI_RS13745 28443f3dabf402cc2f9a1f6832a6c7ba 492 Gene3D G3DSA:3.30.450.90 81 214 7.9E-43 T 28-03-2018 DDI_RS07445 2e3e92f951eec7a1bd57ce0439c1c7b5 225 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS07445 2e3e92f951eec7a1bd57ce0439c1c7b5 225 SUPERFAMILY SSF52540 8 223 5.2E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07445 2e3e92f951eec7a1bd57ce0439c1c7b5 225 SMART SM00382 33 221 2.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07445 2e3e92f951eec7a1bd57ce0439c1c7b5 225 Pfam PF00005 ABC transporter 24 172 4.5E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07445 2e3e92f951eec7a1bd57ce0439c1c7b5 225 Gene3D G3DSA:3.40.50.300 4 225 7.1E-60 T 28-03-2018 DDI_RS05225 e1e8f194c42efb5296df00ee0b96dad4 350 PIRSF PIRSF001361 1 350 3.9E-166 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DDI_RS05225 e1e8f194c42efb5296df00ee0b96dad4 350 Pfam PF00793 DAHP synthetase I family 39 338 1.1E-111 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDI_RS05225 e1e8f194c42efb5296df00ee0b96dad4 350 SUPERFAMILY SSF51569 7 348 3.04E-140 T 28-03-2018 DDI_RS05225 e1e8f194c42efb5296df00ee0b96dad4 350 Gene3D G3DSA:3.20.20.70 8 350 2.0E-136 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS05225 e1e8f194c42efb5296df00ee0b96dad4 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 2.1E-180 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DDI_RS11170 7f0dbfaa10b93d699ed55fb8de2c85b0 204 Gene3D G3DSA:1.20.1050.10 99 204 6.4E-22 T 28-03-2018 DDI_RS11170 7f0dbfaa10b93d699ed55fb8de2c85b0 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 1.7E-11 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDI_RS11170 7f0dbfaa10b93d699ed55fb8de2c85b0 204 SUPERFAMILY SSF52833 1 78 2.15E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS11170 7f0dbfaa10b93d699ed55fb8de2c85b0 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 189 6.5E-14 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal DDI_RS11170 7f0dbfaa10b93d699ed55fb8de2c85b0 204 SUPERFAMILY SSF47616 84 199 1.17E-26 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like DDI_RS11170 7f0dbfaa10b93d699ed55fb8de2c85b0 204 Gene3D G3DSA:3.40.30.10 1 98 8.2E-22 T 28-03-2018 DDI_RS00405 a2999bf84b488b46d206e744b1330776 289 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 285 7.0E-109 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS00405 a2999bf84b488b46d206e744b1330776 289 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS00405 a2999bf84b488b46d206e744b1330776 289 SUPERFAMILY SSF53790 13 232 5.63E-84 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS00405 a2999bf84b488b46d206e744b1330776 289 Gene3D G3DSA:3.30.950.10 122 237 1.5E-40 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS00405 a2999bf84b488b46d206e744b1330776 289 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.385 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS00405 a2999bf84b488b46d206e744b1330776 289 PIRSF PIRSF005917 1 287 5.7E-108 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 DDI_RS00405 a2999bf84b488b46d206e744b1330776 289 Gene3D G3DSA:3.40.1010.10 11 121 7.6E-44 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS00405 a2999bf84b488b46d206e744b1330776 289 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 4.8E-29 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 DDI_RS08000 77a48d465cd502d2718bb013866987e9 397 Gene3D G3DSA:1.20.1250.20 3 209 5.6E-28 T 28-03-2018 DDI_RS08000 77a48d465cd502d2718bb013866987e9 397 Gene3D G3DSA:1.20.1250.20 212 397 1.5E-21 T 28-03-2018 DDI_RS08000 77a48d465cd502d2718bb013866987e9 397 Pfam PF07690 Major Facilitator Superfamily 22 356 1.1E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS08000 77a48d465cd502d2718bb013866987e9 397 SUPERFAMILY SSF103473 13 393 7.59E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS01800 6973ee0120ef059e61322588b4e6cd65 167 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 2.1E-64 T 28-03-2018 IPR009679 Bacteriophage 186, CII DDI_RS18730 ca6fa6570df45ed1a4e7783f45abcd8d 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 2.1E-117 T 28-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 DDI_RS18730 ca6fa6570df45ed1a4e7783f45abcd8d 398 SUPERFAMILY SSF48452 116 213 1.27E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS18730 ca6fa6570df45ed1a4e7783f45abcd8d 398 SUPERFAMILY SSF48452 252 386 1.27E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS18730 ca6fa6570df45ed1a4e7783f45abcd8d 398 Pfam PF07219 HemY protein N-terminus 26 132 7.5E-33 T 28-03-2018 IPR010817 HemY, N-terminal DDI_RS18730 ca6fa6570df45ed1a4e7783f45abcd8d 398 Gene3D G3DSA:1.25.40.10 77 390 1.1E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS09475 cde81f86881f6b4f1ac71c4fa9714e38 388 Gene3D G3DSA:3.40.190.10 55 180 2.0E-7 T 28-03-2018 DDI_RS09475 cde81f86881f6b4f1ac71c4fa9714e38 388 SUPERFAMILY SSF53850 58 344 6.21E-35 T 28-03-2018 DDI_RS09475 cde81f86881f6b4f1ac71c4fa9714e38 388 Gene3D G3DSA:3.40.190.10 181 343 7.4E-19 T 28-03-2018 DDI_RS09475 cde81f86881f6b4f1ac71c4fa9714e38 388 Pfam PF13416 Bacterial extracellular solute-binding protein 78 344 1.8E-23 T 28-03-2018 DDI_RS09655 cef176897691ecfcb796b69f28ecf431 451 Gene3D G3DSA:2.160.20.10 1 399 1.0E-58 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS09655 cef176897691ecfcb796b69f28ecf431 451 SUPERFAMILY SSF51126 5 395 5.46E-18 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS09655 cef176897691ecfcb796b69f28ecf431 451 Pfam PF05048 Periplasmic copper-binding protein (NosD) 160 305 1.1E-9 T 28-03-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDI_RS00385 f23c91699ee5664dc25403bd47eb34cf 191 SMART SM00749 129 191 0.0047 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria DDI_RS00385 f23c91699ee5664dc25403bd47eb34cf 191 SMART SM00749 51 114 2.7E-9 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria DDI_RS00385 f23c91699ee5664dc25403bd47eb34cf 191 Pfam PF04972 BON domain 46 112 2.9E-13 T 28-03-2018 IPR007055 BON domain DDI_RS00385 f23c91699ee5664dc25403bd47eb34cf 191 Pfam PF04972 BON domain 125 188 1.2E-14 T 28-03-2018 IPR007055 BON domain DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 Gene3D G3DSA:1.10.10.10 2 88 1.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 Pfam PF03466 LysR substrate binding domain 99 304 3.5E-16 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 SUPERFAMILY SSF53850 98 305 5.07E-17 T 28-03-2018 DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 Gene3D G3DSA:3.40.190.10 172 279 2.6E-10 T 28-03-2018 DDI_RS13390 ad1b0aa6000c3045485ffb0bfeb30546 308 SUPERFAMILY SSF46785 8 86 1.96E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS09705 f624dde88cf1e3cad026b60045045f75 1634 Gene3D G3DSA:2.130.10.10 140 434 0.15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS09705 f624dde88cf1e3cad026b60045045f75 1634 Gene3D G3DSA:2.130.10.10 487 737 0.013 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS09705 f624dde88cf1e3cad026b60045045f75 1634 Pfam PF11725 Pathogenicity factor 47 1631 5.4E-256 T 28-03-2018 IPR021085 Pathogenicity factor DDI_RS11915 885db2d7b78ea55e34b31b586cf049fe 262 Pfam PF02562 PhoH-like protein 57 261 1.6E-76 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 DDI_RS11915 885db2d7b78ea55e34b31b586cf049fe 262 Gene3D G3DSA:3.40.50.300 53 257 2.7E-23 T 28-03-2018 DDI_RS11915 885db2d7b78ea55e34b31b586cf049fe 262 SUPERFAMILY SSF52540 57 237 9.91E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS12605 0a49dc68309ca116e608f50bdba1ff35 369 Gene3D G3DSA:3.40.50.300 167 328 3.9E-23 T 28-03-2018 DDI_RS12605 0a49dc68309ca116e608f50bdba1ff35 369 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 141 351 1.2E-92 T 28-03-2018 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 DDI_RS12605 0a49dc68309ca116e608f50bdba1ff35 369 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 169 330 1.2E-35 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DDI_RS12605 0a49dc68309ca116e608f50bdba1ff35 369 SUPERFAMILY SSF52540 153 349 9.65E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 SUPERFAMILY SSF52540 332 580 6.58E-96 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 5.3E-261 T 28-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 Pfam PF00664 ABC transporter transmembrane region 28 297 3.0E-60 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 SUPERFAMILY SSF90123 14 327 3.53E-74 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 SMART SM00382 368 555 2.3E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 Gene3D G3DSA:3.40.50.300 329 581 3.6E-78 T 28-03-2018 DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 Pfam PF00005 ABC transporter 359 509 2.8E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS08345 97bd74e8bf38ff421ea4b007ff25fa55 582 Gene3D G3DSA:1.20.1560.10 2 328 3.5E-65 T 28-03-2018 DDI_RS17215 37329b5dc6d78fd2fc97c08e9bab254c 232 SUPERFAMILY SSF54060 25 230 5.89E-88 T 28-03-2018 DDI_RS17215 37329b5dc6d78fd2fc97c08e9bab254c 232 Pfam PF04231 Endonuclease I 23 230 1.6E-45 T 28-03-2018 IPR007346 Endonuclease I GO:0004518 DDI_RS13410 40f69c5254b21a12701c1523d3b0610b 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 65 9.9E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS13410 40f69c5254b21a12701c1523d3b0610b 208 SUPERFAMILY SSF46689 12 82 1.75E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS13410 40f69c5254b21a12701c1523d3b0610b 208 SUPERFAMILY SSF48498 86 188 1.56E-7 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS13410 40f69c5254b21a12701c1523d3b0610b 208 Gene3D G3DSA:1.10.357.10 3 195 1.2E-27 T 28-03-2018 DDI_RS06385 dd3d3050efa3c6b09a3cf6ad9a5d7162 597 Pfam PF05935 Arylsulfotransferase (ASST) 111 382 1.8E-21 T 28-03-2018 IPR010262 Arylsulfotransferase, C-terminal DDI_RS06385 dd3d3050efa3c6b09a3cf6ad9a5d7162 597 Pfam PF00085 Thioredoxin 515 593 1.8E-9 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 DDI_RS06385 dd3d3050efa3c6b09a3cf6ad9a5d7162 597 Gene3D G3DSA:3.40.30.10 492 597 6.3E-13 T 28-03-2018 DDI_RS06385 dd3d3050efa3c6b09a3cf6ad9a5d7162 597 SUPERFAMILY SSF52833 512 596 1.01E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS12215 d5d4df336a6032597e045466797758ec 125 Gene3D G3DSA:1.20.120.10 26 122 1.1E-9 T 28-03-2018 DDI_RS12215 d5d4df336a6032597e045466797758ec 125 Pfam PF07361 Cytochrome b562 27 122 4.2E-23 T 28-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 DDI_RS12215 d5d4df336a6032597e045466797758ec 125 SUPERFAMILY SSF47175 26 123 1.29E-19 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 DDI_RS13545 96a0a1060528b95c4e4afe009fd4340d 178 Pfam PF00857 Isochorismatase family 3 135 3.8E-28 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 DDI_RS13545 96a0a1060528b95c4e4afe009fd4340d 178 Gene3D G3DSA:3.40.50.850 1 176 6.2E-33 T 28-03-2018 DDI_RS13545 96a0a1060528b95c4e4afe009fd4340d 178 SUPERFAMILY SSF52499 3 151 1.1E-35 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 DDI_RS16350 dc5ce3206c99cc668dd9a67d4f4e6c03 192 Gene3D G3DSA:2.30.110.10 8 192 7.4E-41 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS16350 dc5ce3206c99cc668dd9a67d4f4e6c03 192 SMART SM00903 15 162 3.5E-22 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 DDI_RS16350 dc5ce3206c99cc668dd9a67d4f4e6c03 192 SUPERFAMILY SSF50475 5 187 2.11E-40 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS16350 dc5ce3206c99cc668dd9a67d4f4e6c03 192 Pfam PF01613 Flavin reductase like domain 17 154 1.1E-17 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 DDI_RS08030 dc500c77c34a84ebe1fb01b54d717dd1 293 SUPERFAMILY SSF47090 208 281 8.63E-19 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS08030 dc500c77c34a84ebe1fb01b54d717dd1 293 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 49 187 7.0E-24 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDI_RS08030 dc500c77c34a84ebe1fb01b54d717dd1 293 SUPERFAMILY SSF55846 40 202 4.71E-46 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDI_RS08030 dc500c77c34a84ebe1fb01b54d717dd1 293 SMART SM00644 39 186 9.0E-27 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDI_RS08030 dc500c77c34a84ebe1fb01b54d717dd1 293 Gene3D G3DSA:3.40.80.10 49 200 8.9E-40 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDI_RS08030 dc500c77c34a84ebe1fb01b54d717dd1 293 Gene3D G3DSA:1.10.101.10 201 284 2.4E-7 T 28-03-2018 IPR002477 Peptidoglycan binding-like DDI_RS11700 e5dd3c54dbcd31bd217572fffeaed719 127 Pfam PF07233 Protein of unknown function (DUF1425) 37 125 9.3E-26 T 28-03-2018 IPR010824 Protein of unknown function DUF1425 DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 Pfam PF16591 Helical bimodular sensor domain 53 277 1.6E-10 T 28-03-2018 IPR032255 Helical bimodular sensor domain DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 Gene3D G3DSA:1.10.287.950 53 415 1.4E-16 T 28-03-2018 DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 Gene3D G3DSA:1.10.287.950 416 611 6.7E-49 T 28-03-2018 DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 SMART SM01358 36 285 1.3E-55 T 28-03-2018 IPR032255 Helical bimodular sensor domain DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 SMART SM00283 360 607 3.9E-95 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 SMART SM00304 307 359 2.4E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 574 4.8E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 SUPERFAMILY SSF58104 327 609 1.05E-75 T 28-03-2018 DDI_RS10395 015b06c68aeb140c0613d8c97ccc8ab2 658 Pfam PF00672 HAMP domain 309 350 2.3E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS18260 823ebbe4cf90235d38e2f1d600746f11 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 4.3E-28 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DDI_RS18260 823ebbe4cf90235d38e2f1d600746f11 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 4.3E-28 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DDI_RS18260 823ebbe4cf90235d38e2f1d600746f11 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 4.3E-28 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DDI_RS18260 823ebbe4cf90235d38e2f1d600746f11 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.3E-28 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DDI_RS18260 823ebbe4cf90235d38e2f1d600746f11 289 Gene3D G3DSA:3.40.50.300 1 288 2.2E-39 T 28-03-2018 DDI_RS18260 823ebbe4cf90235d38e2f1d600746f11 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.2E-71 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 DDI_RS18260 823ebbe4cf90235d38e2f1d600746f11 289 SUPERFAMILY SSF52540 4 286 1.87E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18260 823ebbe4cf90235d38e2f1d600746f11 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DDI_RS18510 7f587baf58c5acd4c6ad78c435ef18ec 274 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 274 45.979 T 28-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 DDI_RS18510 7f587baf58c5acd4c6ad78c435ef18ec 274 Gene3D G3DSA:1.20.1540.10 92 271 4.8E-36 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DDI_RS18510 7f587baf58c5acd4c6ad78c435ef18ec 274 SUPERFAMILY SSF144091 93 271 3.14E-41 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DDI_RS18510 7f587baf58c5acd4c6ad78c435ef18ec 274 Pfam PF01694 Rhomboid family 130 271 1.5E-30 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DDI_RS18510 7f587baf58c5acd4c6ad78c435ef18ec 274 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 7.1E-27 T 28-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 DDI_RS18510 7f587baf58c5acd4c6ad78c435ef18ec 274 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 270 4.4E-114 T 28-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 221 238 2.1E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 2.1E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 201 219 2.1E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 2.1E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 2.1E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 346 2.0E-121 T 28-03-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 SUPERFAMILY SSF160544 249 349 1.83E-27 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 2 342 1.7E-93 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DDI_RS10385 8e3435188237e48bba2d17bee4f10d0c 359 Gene3D G3DSA:3.40.1690.10 211 349 9.2E-45 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DDI_RS20935 4068fd219984bb41b992ba2ca614a4bb 246 SUPERFAMILY SSF52540 2 226 2.51E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS20935 4068fd219984bb41b992ba2ca614a4bb 246 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS20935 4068fd219984bb41b992ba2ca614a4bb 246 SMART SM00382 26 212 1.9E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS20935 4068fd219984bb41b992ba2ca614a4bb 246 Pfam PF00005 ABC transporter 18 163 5.1E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS20935 4068fd219984bb41b992ba2ca614a4bb 246 Gene3D G3DSA:3.40.50.300 1 239 4.8E-65 T 28-03-2018 DDI_RS01025 9fc286fbb1e9692cccacb8b17091eca5 203 Pfam PF01338 Bacillus thuringiensis toxin 19 170 7.9E-17 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01025 9fc286fbb1e9692cccacb8b17091eca5 203 ProDom PD009844 CYTOLYTIC TOXIN DELTA-ENDOTOXIN SPORULATION PLASMID TYPE-1AA TOCIN 3D-STRUCTURE CRYET29 TYPE-1BA 25 166 1.0E-8 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01025 9fc286fbb1e9692cccacb8b17091eca5 203 SUPERFAMILY SSF55676 20 174 6.15E-16 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS01025 9fc286fbb1e9692cccacb8b17091eca5 203 Gene3D G3DSA:3.40.198.10 12 199 2.0E-39 T 28-03-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 DDI_RS08625 e3516c6b8b0e157857e7af44fed0417b 190 SUPERFAMILY SSF54593 10 185 1.41E-67 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS08625 e3516c6b8b0e157857e7af44fed0417b 190 Gene3D G3DSA:3.10.180.10 9 186 1.2E-73 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS08625 e3516c6b8b0e157857e7af44fed0417b 190 Pfam PF06185 YecM protein 12 185 8.0E-72 T 28-03-2018 IPR010393 Protein of unknown function DUF991 DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 Gene3D G3DSA:3.30.470.20 156 339 2.7E-31 T 28-03-2018 DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 SUPERFAMILY SSF52440 2 74 7.19E-15 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 Pfam PF02222 ATP-grasp domain 88 254 4.1E-53 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 Gene3D G3DSA:3.30.1490.20 94 155 1.5E-11 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 330 1.5E-110 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.965 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 Gene3D G3DSA:3.40.50.20 1 69 1.8E-15 T 28-03-2018 DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 SUPERFAMILY SSF56059 79 274 4.47E-56 T 28-03-2018 DDI_RS13480 0061352540d19425c059bbb310fbe2a3 356 SUPERFAMILY SSF51246 278 353 6.28E-21 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDI_RS07805 cb34a7beae23d79899da96cac46faf62 331 Gene3D G3DSA:1.10.3470.10 44 329 7.6E-30 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS07805 cb34a7beae23d79899da96cac46faf62 331 SUPERFAMILY SSF81345 26 242 4.18E-5 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS07805 cb34a7beae23d79899da96cac46faf62 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 1.9E-36 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS12050 2515c2bd03da7a3accbafd799b297f28 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 3.5E-32 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS12050 2515c2bd03da7a3accbafd799b297f28 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 3.5E-32 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS12050 2515c2bd03da7a3accbafd799b297f28 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 3.5E-32 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS12050 2515c2bd03da7a3accbafd799b297f28 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 3.5E-32 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS12050 2515c2bd03da7a3accbafd799b297f28 260 Pfam PF01311 Bacterial export proteins, family 1 14 245 3.1E-68 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DDI_RS12050 2515c2bd03da7a3accbafd799b297f28 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 255 2.8E-72 T 28-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 DDI_RS03115 405b08c23f886da8203c32534c6df581 547 SUPERFAMILY SSF117457 361 536 2.75E-60 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DDI_RS03115 405b08c23f886da8203c32534c6df581 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 2.3E-84 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DDI_RS03115 405b08c23f886da8203c32534c6df581 547 Pfam PF05683 Fumarase C-terminus 332 536 5.1E-92 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DDI_RS03115 405b08c23f886da8203c32534c6df581 547 PIRSF PIRSF001394 30 547 2.5E-229 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 DDI_RS03115 405b08c23f886da8203c32534c6df581 547 Gene3D G3DSA:3.20.130.10 359 536 1.5E-66 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DDI_RS03115 405b08c23f886da8203c32534c6df581 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 536 7.7E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DDI_RS03115 405b08c23f886da8203c32534c6df581 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 6.7E-32 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DDI_RS06335 af58e327e507085be3619f79088f825a 773 Pfam PF00593 TonB dependent receptor 332 771 9.7E-33 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS06335 af58e327e507085be3619f79088f825a 773 Gene3D G3DSA:2.40.170.20 197 773 2.7E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 DDI_RS06335 af58e327e507085be3619f79088f825a 773 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 186 2.1E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS06335 af58e327e507085be3619f79088f825a 773 SUPERFAMILY SSF56935 58 773 1.04E-96 T 28-03-2018 DDI_RS06335 af58e327e507085be3619f79088f825a 773 Gene3D G3DSA:2.170.130.10 55 196 4.5E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 DDI_RS01715 82ca8f386d52e7edb5e5e8a949395edb 448 PIRSF PIRSF002808 11 447 1.1E-145 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 DDI_RS01715 82ca8f386d52e7edb5e5e8a949395edb 448 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 DDI_RS01715 82ca8f386d52e7edb5e5e8a949395edb 448 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 41 418 6.0E-146 T 28-03-2018 DDI_RS01715 82ca8f386d52e7edb5e5e8a949395edb 448 SUPERFAMILY SSF103473 22 442 3.92E-74 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS01715 82ca8f386d52e7edb5e5e8a949395edb 448 Gene3D G3DSA:1.20.1250.20 242 447 7.8E-28 T 28-03-2018 DDI_RS01715 82ca8f386d52e7edb5e5e8a949395edb 448 Gene3D G3DSA:1.20.1250.20 24 226 7.7E-30 T 28-03-2018 DDI_RS01715 82ca8f386d52e7edb5e5e8a949395edb 448 Pfam PF07690 Major Facilitator Superfamily 40 401 3.2E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS08925 d3c5dfc03fbf9fcfc2327fae833b5db8 91 Pfam PF07023 Protein of unknown function (DUF1315) 5 79 1.5E-26 T 28-03-2018 IPR009749 Protein of unknown function DUF1315 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00463 E-class P450 group I signature 35 54 7.0E-26 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00463 E-class P450 group I signature 363 387 7.0E-26 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00463 E-class P450 group I signature 396 406 7.0E-26 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00463 E-class P450 group I signature 280 306 7.0E-26 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00463 E-class P450 group I signature 323 341 7.0E-26 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00463 E-class P450 group I signature 260 277 7.0E-26 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00463 E-class P450 group I signature 406 429 7.0E-26 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00385 P450 superfamily signature 324 335 8.3E-13 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00385 P450 superfamily signature 271 288 8.3E-13 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00385 P450 superfamily signature 397 406 8.3E-13 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 PRINTS PR00385 P450 superfamily signature 406 417 8.3E-13 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 399 408 - T 28-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 Gene3D G3DSA:1.10.630.10 3 468 5.4E-104 T 28-03-2018 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 Pfam PF00067 Cytochrome P450 10 453 3.8E-73 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS16000 9c4e34546edf0779496d2a0ef3f84e88 468 SUPERFAMILY SSF48264 3 458 2.36E-95 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DDI_RS00665 991b4f988cd2c58858040a5b4b2cba2f 563 SUPERFAMILY SSF54373 365 483 1.37E-26 T 28-03-2018 DDI_RS00665 991b4f988cd2c58858040a5b4b2cba2f 563 Pfam PF01593 Flavin containing amine oxidoreductase 53 541 2.9E-83 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DDI_RS00665 991b4f988cd2c58858040a5b4b2cba2f 563 Gene3D G3DSA:3.50.50.60 11 394 3.5E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS00665 991b4f988cd2c58858040a5b4b2cba2f 563 Gene3D G3DSA:3.50.50.60 417 563 2.8E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS00665 991b4f988cd2c58858040a5b4b2cba2f 563 SUPERFAMILY SSF51905 43 384 3.24E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS00665 991b4f988cd2c58858040a5b4b2cba2f 563 SUPERFAMILY SSF51905 503 543 3.24E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS12775 ec67a38bc8ce91e7dd4017d5ddaa8aa6 204 PIRSF PIRSF017340 2 171 2.4E-68 T 28-03-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 DDI_RS12775 ec67a38bc8ce91e7dd4017d5ddaa8aa6 204 Pfam PF00293 NUDIX domain 37 151 2.0E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS12775 ec67a38bc8ce91e7dd4017d5ddaa8aa6 204 SUPERFAMILY SSF55811 11 166 7.18E-35 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS12775 ec67a38bc8ce91e7dd4017d5ddaa8aa6 204 Gene3D G3DSA:3.90.79.10 2 180 2.8E-37 T 28-03-2018 DDI_RS13625 55d78215ad36065340e2cb9fc7c46b1f 393 Pfam PF07670 Nucleoside recognition 91 189 7.5E-8 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DDI_RS13625 55d78215ad36065340e2cb9fc7c46b1f 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 391 9.8E-60 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 DDI_RS13625 55d78215ad36065340e2cb9fc7c46b1f 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 81 2.3E-17 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 DDI_RS17650 4921d80e14b61e219d5945c1e18ca1b0 702 Gene3D G3DSA:2.40.50.100 441 571 7.3E-10 T 28-03-2018 DDI_RS17650 4921d80e14b61e219d5945c1e18ca1b0 702 Pfam PF13533 Biotin-lipoyl like 452 487 4.2E-7 T 28-03-2018 DDI_RS17650 4921d80e14b61e219d5945c1e18ca1b0 702 Pfam PF13437 HlyD family secretion protein 540 621 3.4E-6 T 28-03-2018 DDI_RS10040 8a947db80adf6a02666c39d789e952db 294 Gene3D G3DSA:3.30.2010.10 64 157 1.0E-20 T 28-03-2018 DDI_RS10040 8a947db80adf6a02666c39d789e952db 294 Hamap MF_00188 Protease HtpX [htpX]. 1 290 25.978 T 28-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DDI_RS10040 8a947db80adf6a02666c39d789e952db 294 Pfam PF01435 Peptidase family M48 74 289 1.9E-38 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DDI_RS15940 ee80dcd30651c3bcfa834b59f35271e4 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 269 1.2E-8 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15940 ee80dcd30651c3bcfa834b59f35271e4 280 SUPERFAMILY SSF161098 2 275 2.71E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15940 ee80dcd30651c3bcfa834b59f35271e4 280 Gene3D G3DSA:1.10.3720.10 6 278 4.3E-34 T 28-03-2018 DDI_RS03915 8af723dc75a4ef69ec5eb71b606e9580 277 Gene3D G3DSA:3.20.20.150 3 275 6.9E-33 T 28-03-2018 DDI_RS03915 8af723dc75a4ef69ec5eb71b606e9580 277 Pfam PF05114 Protein of unknown function (DUF692) 44 245 1.2E-25 T 28-03-2018 IPR007801 Uncharacterised protein family UPF0276 DDI_RS02250 c33b64d20325053d8ce3e5fa65f64cda 312 SUPERFAMILY SSF53686 5 302 1.57E-66 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS02250 c33b64d20325053d8ce3e5fa65f64cda 312 Gene3D G3DSA:3.40.50.1100 16 127 9.1E-33 T 28-03-2018 DDI_RS02250 c33b64d20325053d8ce3e5fa65f64cda 312 Gene3D G3DSA:3.40.50.1100 128 303 9.1E-25 T 28-03-2018 DDI_RS02250 c33b64d20325053d8ce3e5fa65f64cda 312 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 292 9.9E-59 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDI_RS00880 fa134eef2c09c0a24502880e095b082b 94 Pfam PF13744 Helix-turn-helix domain 36 93 1.5E-11 T 28-03-2018 DDI_RS00880 fa134eef2c09c0a24502880e095b082b 94 Gene3D G3DSA:3.30.1190.10 54 94 5.5E-12 T 28-03-2018 DDI_RS00880 fa134eef2c09c0a24502880e095b082b 94 SMART SM00530 37 92 2.4E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS00880 fa134eef2c09c0a24502880e095b082b 94 Gene3D G3DSA:1.10.10.10 18 53 3.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00880 fa134eef2c09c0a24502880e095b082b 94 SUPERFAMILY SSF47413 25 93 1.32E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS19215 9e3516d8df87771f23049db096d7e69b 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 6.1E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS19215 9e3516d8df87771f23049db096d7e69b 232 Pfam PF00072 Response regulator receiver domain 4 112 8.6E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS19215 9e3516d8df87771f23049db096d7e69b 232 SMART SM00862 152 228 1.6E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDI_RS19215 9e3516d8df87771f23049db096d7e69b 232 SUPERFAMILY SSF52172 2 188 1.42E-40 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS19215 9e3516d8df87771f23049db096d7e69b 232 Gene3D G3DSA:3.40.50.2300 2 120 1.8E-37 T 28-03-2018 DDI_RS19215 9e3516d8df87771f23049db096d7e69b 232 Gene3D G3DSA:1.10.10.10 121 232 5.0E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS19215 9e3516d8df87771f23049db096d7e69b 232 SMART SM00448 2 111 6.3E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS07555 d9b38e7bb40f63aee37dbea9cb3362cd 597 Gene3D G3DSA:3.40.50.1700 391 597 2.6E-10 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DDI_RS07555 d9b38e7bb40f63aee37dbea9cb3362cd 597 SUPERFAMILY SSF52279 405 597 1.83E-8 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DDI_RS07555 d9b38e7bb40f63aee37dbea9cb3362cd 597 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 280 297 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 DDI_RS07555 d9b38e7bb40f63aee37dbea9cb3362cd 597 SUPERFAMILY SSF51445 3 377 4.95E-81 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily DDI_RS07555 d9b38e7bb40f63aee37dbea9cb3362cd 597 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 368 4.4E-87 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS07555 d9b38e7bb40f63aee37dbea9cb3362cd 597 Gene3D G3DSA:3.20.20.300 1 390 6.8E-87 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDI_RS03525 ba872e974505ea5cce6afefa23ab7e43 114 Pfam PF04320 Protein with unknown function (DUF469) 7 107 3.7E-42 T 28-03-2018 IPR007416 Protein of unknown function DUF469 DDI_RS05295 92566611b59313eb7efc136c13f58656 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 326 4.2E-91 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller DDI_RS05295 92566611b59313eb7efc136c13f58656 331 SUPERFAMILY SSF50974 4 291 5.89E-48 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 DDI_RS05295 92566611b59313eb7efc136c13f58656 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 330 56.45 T 28-03-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 DDI_RS05295 92566611b59313eb7efc136c13f58656 331 Gene3D G3DSA:2.130.10.10 1 330 1.8E-50 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.2E-47 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.2E-47 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.2E-47 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.2E-47 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.2E-47 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 Gene3D G3DSA:3.90.79.10 1 145 3.6E-29 T 28-03-2018 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 SUPERFAMILY SSF55811 3 142 3.79E-24 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS08670 f21eaeccf5e253cba9476e3b9c11cb44 147 Pfam PF00293 NUDIX domain 5 141 1.3E-16 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS07450 fdde87253e0eb98dc62bbbfdb758536c 393 Pfam PF02687 FtsX-like permease family 299 386 1.2E-9 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDI_RS07450 fdde87253e0eb98dc62bbbfdb758536c 393 Pfam PF12704 MacB-like periplasmic core domain 23 236 1.4E-17 T 28-03-2018 IPR025857 MacB-like periplasmic core domain DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 Gene3D G3DSA:1.10.10.10 1 82 3.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 SUPERFAMILY SSF46785 1 112 3.05E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 Pfam PF03466 LysR substrate binding domain 90 299 5.5E-22 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 SUPERFAMILY SSF53850 92 298 9.23E-22 T 28-03-2018 DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 Gene3D G3DSA:3.40.190.10 185 266 8.3E-7 T 28-03-2018 DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS06405 c2ccb17c590c2c6c8d06f2d570e4c184 308 Gene3D G3DSA:3.40.190.10 83 184 1.6E-16 T 28-03-2018 DDI_RS03825 7c576a6fbced6f78c27f098249260384 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 65 4.5E-34 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 DDI_RS03825 7c576a6fbced6f78c27f098249260384 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 1.0E-24 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 DDI_RS16760 0eed039fba349d7fcbcbb73aa06762cc 107 Pfam PF04999 Cell division protein FtsL 12 104 5.7E-34 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 DDI_RS16760 0eed039fba349d7fcbcbb73aa06762cc 107 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 17.043 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 DDI_RS16760 0eed039fba349d7fcbcbb73aa06762cc 107 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 103 9.7E-27 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 DDI_RS16900 8390ac4e386252cdf2e80aab5aa86985 159 Gene3D G3DSA:2.30.110.20 2 158 1.2E-39 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS16900 8390ac4e386252cdf2e80aab5aa86985 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 2.9E-55 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS16900 8390ac4e386252cdf2e80aab5aa86985 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 5.0E-20 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS16900 8390ac4e386252cdf2e80aab5aa86985 159 SUPERFAMILY SSF141452 4 156 5.36E-31 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp DDI_RS14940 901bcade2fe2963faeaf16e8ccdccf5d 315 SUPERFAMILY SSF161098 90 296 1.83E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14940 901bcade2fe2963faeaf16e8ccdccf5d 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 313 5.7E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14940 901bcade2fe2963faeaf16e8ccdccf5d 315 Gene3D G3DSA:1.10.3720.10 2 302 5.6E-37 T 28-03-2018 DDI_RS02200 e516e26c1e462a2aa620740a3afc1f32 167 SUPERFAMILY SSF55729 1 154 1.7E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS02200 e516e26c1e462a2aa620740a3afc1f32 167 Pfam PF00583 Acetyltransferase (GNAT) family 38 122 2.3E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS02200 e516e26c1e462a2aa620740a3afc1f32 167 Gene3D G3DSA:3.40.630.30 1 130 9.5E-20 T 28-03-2018 DDI_RS05425 c7e7de8719be3742c0412d82f9796387 519 SUPERFAMILY SSF51126 54 377 4.07E-9 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS05425 c7e7de8719be3742c0412d82f9796387 519 Gene3D G3DSA:2.160.20.10 43 463 3.7E-13 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS02275 6cc5cd51072acfbebb24705387d5764a 147 SUPERFAMILY SSF55729 3 146 5.64E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS02275 6cc5cd51072acfbebb24705387d5764a 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 1.5E-41 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DDI_RS02275 6cc5cd51072acfbebb24705387d5764a 147 Gene3D G3DSA:3.40.630.30 1 147 1.6E-30 T 28-03-2018 DDI_RS02275 6cc5cd51072acfbebb24705387d5764a 147 Pfam PF00583 Acetyltransferase (GNAT) family 25 120 6.4E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS11120 61e5bc5467c277f620b06586ba069fdc 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 196 1.9E-44 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS11120 61e5bc5467c277f620b06586ba069fdc 231 SMART SM01007 7 198 1.0E-64 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS11120 61e5bc5467c277f620b06586ba069fdc 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 1.2E-126 T 28-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 DDI_RS11120 61e5bc5467c277f620b06586ba069fdc 231 Gene3D G3DSA:3.40.225.10 1 231 4.0E-56 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS11120 61e5bc5467c277f620b06586ba069fdc 231 SUPERFAMILY SSF53639 1 223 4.71E-68 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS10035 c06b75d7ada8a32175c3af240e4829cc 388 SUPERFAMILY SSF82171 165 382 2.88E-32 T 28-03-2018 DDI_RS10035 c06b75d7ada8a32175c3af240e4829cc 388 SUPERFAMILY SSF82171 16 135 2.88E-32 T 28-03-2018 DDI_RS10035 c06b75d7ada8a32175c3af240e4829cc 388 Pfam PF14583 Oligogalacturonate lyase 1 386 5.3E-258 T 28-03-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 DDI_RS10035 c06b75d7ada8a32175c3af240e4829cc 388 Gene3D G3DSA:2.130.10.10 1 388 1.1E-40 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 DDI_RS02575 b45c610a1c47aa1ca374defbc88a5935 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 2 305 68.78 T 28-03-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 DDI_RS02575 b45c610a1c47aa1ca374defbc88a5935 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 305 48.834 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 DDI_RS02575 b45c610a1c47aa1ca374defbc88a5935 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 305 1.7E-133 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 DDI_RS02575 b45c610a1c47aa1ca374defbc88a5935 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 296 7.2E-101 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDI_RS02575 b45c610a1c47aa1ca374defbc88a5935 306 PIRSF PIRSF026649 1 305 7.4E-94 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDI_RS12230 4b5f1d82e1728d5cfaa87ad44a60e07d 103 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 80 4.0E-22 T 28-03-2018 IPR007633 Bacteriophage P2, GpY, holin DDI_RS12230 4b5f1d82e1728d5cfaa87ad44a60e07d 103 Pfam PF04550 Phage holin family 2 1 86 6.0E-40 T 28-03-2018 IPR007633 Bacteriophage P2, GpY, holin DDI_RS06205 7ead2783eff1599d4a048937f7acbe48 86 Gene3D G3DSA:3.30.2310.20 1 86 6.2E-14 T 28-03-2018 DDI_RS06205 7ead2783eff1599d4a048937f7acbe48 86 SUPERFAMILY SSF143011 1 80 7.85E-16 T 28-03-2018 IPR035095 Toxin RelE-like domain DDI_RS06205 7ead2783eff1599d4a048937f7acbe48 86 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 72 3.3E-8 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDI_RS00845 fd5e9fcab9d6cd6cf1cde3c2c04181a3 293 Pfam PF12835 Integrase 102 250 1.4E-60 T 28-03-2018 IPR024456 Integrase catalytic domain, putative DDI_RS00845 fd5e9fcab9d6cd6cf1cde3c2c04181a3 293 Pfam PF12834 Phage integrase, N-terminal 1 91 1.6E-35 T 28-03-2018 IPR024457 Putative integrase, N-terminal DDI_RS00845 fd5e9fcab9d6cd6cf1cde3c2c04181a3 293 Gene3D G3DSA:1.10.150.130 2 101 2.5E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal DDI_RS00845 fd5e9fcab9d6cd6cf1cde3c2c04181a3 293 SUPERFAMILY SSF56349 12 254 1.68E-17 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDI_RS00845 fd5e9fcab9d6cd6cf1cde3c2c04181a3 293 Gene3D G3DSA:1.10.443.10 113 292 7.3E-11 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDI_RS05000 e1dc6dfdf3b0b4d7acaea72b59cc25ce 90 Gene3D G3DSA:1.10.1220.10 38 90 2.3E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS05000 e1dc6dfdf3b0b4d7acaea72b59cc25ce 90 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 89 1.8E-6 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 Pfam PF00106 short chain dehydrogenase 6 194 7.1E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 Gene3D G3DSA:3.40.50.720 4 287 3.3E-54 T 28-03-2018 DDI_RS20295 3e72b502664b6ff8c93c853dbf87b42a 293 SUPERFAMILY SSF51735 5 249 1.2E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS11585 400250c98438700c92c7124e4468b44c 154 SUPERFAMILY SSF54001 31 154 5.49E-41 T 28-03-2018 DDI_RS11585 400250c98438700c92c7124e4468b44c 154 Pfam PF00877 NlpC/P60 family 47 153 3.0E-30 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain DDI_RS11585 400250c98438700c92c7124e4468b44c 154 Gene3D G3DSA:3.90.1720.10 31 154 2.2E-36 T 28-03-2018 DDI_RS13185 223f485460b075f9c9097f544c0c7283 133 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 18 127 4.9E-44 T 28-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like DDI_RS13185 223f485460b075f9c9097f544c0c7283 133 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 43 120 8.0E-5 T 28-03-2018 DDI_RS13185 223f485460b075f9c9097f544c0c7283 133 TIGRFAM TIGR01004 PulS_OutS: lipoprotein, PulS/OutS family 1 132 1.4E-61 T 28-03-2018 IPR005699 Chaperone lipoprotein, PulS/OutS GO:0006886|GO:0008565 DDI_RS17035 36a58aff71a79c4ac6f6f309338a4c41 391 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 10 382 1.3E-150 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DDI_RS17035 36a58aff71a79c4ac6f6f309338a4c41 391 Pfam PF06965 Na+/H+ antiporter 1 11 382 1.9E-138 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DDI_RS17035 36a58aff71a79c4ac6f6f309338a4c41 391 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 391 22.4 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DDI_RS17035 36a58aff71a79c4ac6f6f309338a4c41 391 Gene3D G3DSA:1.20.1530.10 3 386 2.3E-138 T 28-03-2018 IPR023171 Na/H antiporter domain DDI_RS01535 5e9491dcdb182e604d6684f9a022fe96 127 Pfam PF03091 CutA1 divalent ion tolerance protein 27 124 1.2E-32 T 28-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 DDI_RS01535 5e9491dcdb182e604d6684f9a022fe96 127 Gene3D G3DSA:3.30.70.120 19 127 1.3E-35 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DDI_RS01535 5e9491dcdb182e604d6684f9a022fe96 127 SUPERFAMILY SSF54913 24 126 5.19E-34 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DDI_RS01535 5e9491dcdb182e604d6684f9a022fe96 127 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 21 127 35.706 T 28-03-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 Gene3D G3DSA:3.40.50.980 3 145 4.2E-23 T 28-03-2018 DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 Gene3D G3DSA:3.40.50.980 146 283 4.3E-28 T 28-03-2018 DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 447 4.0E-110 T 28-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 SUPERFAMILY SSF56801 9 453 8.5E-96 T 28-03-2018 DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 Gene3D G3DSA:2.30.38.10 284 352 3.9E-6 T 28-03-2018 DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 Pfam PF13193 AMP-binding enzyme C-terminal domain 369 431 4.9E-8 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 ProSitePatterns PS00455 Putative AMP-binding domain signature. 140 151 - T 28-03-2018 IPR020845 AMP-binding, conserved site DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 Gene3D G3DSA:3.30.300.30 354 456 9.7E-18 T 28-03-2018 DDI_RS04585 9962bfbc6f917a21f1a4e4791653ecea 456 Pfam PF00501 AMP-binding enzyme 11 357 7.0E-51 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 DDI_RS12225 b26c1db8abcb9a23b245505edd63c576 425 SUPERFAMILY SSF51126 32 424 1.4E-76 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS12225 b26c1db8abcb9a23b245505edd63c576 425 SMART SM00710 161 183 61.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS12225 b26c1db8abcb9a23b245505edd63c576 425 SMART SM00710 242 276 9800.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS12225 b26c1db8abcb9a23b245505edd63c576 425 SMART SM00710 185 215 4000.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS12225 b26c1db8abcb9a23b245505edd63c576 425 SMART SM00710 304 327 2600.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS12225 b26c1db8abcb9a23b245505edd63c576 425 SMART SM00710 218 240 740.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS12225 b26c1db8abcb9a23b245505edd63c576 425 Gene3D G3DSA:2.160.20.10 26 425 9.0E-61 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS12225 b26c1db8abcb9a23b245505edd63c576 425 Pfam PF13229 Right handed beta helix region 133 313 3.1E-19 T 28-03-2018 DDI_RS07945 aaea8c53fa17d129c6d10fd496893a3c 124 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 3 120 7.0E-37 T 28-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 DDI_RS07945 aaea8c53fa17d129c6d10fd496893a3c 124 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 4 119 4.6E-48 T 28-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 DDI_RS16465 13a895286023743cfdac2c2bb45f7aa5 333 Gene3D G3DSA:1.20.58.370 18 67 4.1E-8 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain DDI_RS16465 13a895286023743cfdac2c2bb45f7aa5 333 Gene3D G3DSA:1.10.3720.10 100 329 5.1E-44 T 28-03-2018 DDI_RS16465 13a895286023743cfdac2c2bb45f7aa5 333 SUPERFAMILY SSF161098 101 320 1.44E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS16465 13a895286023743cfdac2c2bb45f7aa5 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 330 7.8E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 Pfam PF13522 Glutamine amidotransferase domain 67 185 1.2E-19 T 28-03-2018 DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 Gene3D G3DSA:3.40.50.10490 241 459 5.3E-60 T 28-03-2018 DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 Pfam PF01380 SIS domain 463 593 1.8E-27 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 Pfam PF01380 SIS domain 290 419 7.6E-34 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 SUPERFAMILY SSF53697 246 611 1.76E-111 T 28-03-2018 DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 Gene3D G3DSA:3.40.50.10490 460 609 7.5E-51 T 28-03-2018 DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 SUPERFAMILY SSF56235 2 233 4.2E-71 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 1.5E-260 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 Gene3D G3DSA:3.60.20.10 2 240 1.9E-66 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS20035 af3a6de70911fd1d86ba05ddeb63ba74 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 40.89 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DDI_RS11195 e851243bec70926690490c0e65203458 370 SUPERFAMILY SSF53067 143 340 3.56E-25 T 28-03-2018 DDI_RS11195 e851243bec70926690490c0e65203458 370 SUPERFAMILY SSF53067 66 111 3.56E-25 T 28-03-2018 DDI_RS11195 e851243bec70926690490c0e65203458 370 SUPERFAMILY SSF53067 5 36 3.56E-25 T 28-03-2018 DDI_RS11195 e851243bec70926690490c0e65203458 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 367 9.4E-167 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 DDI_RS11195 e851243bec70926690490c0e65203458 370 Gene3D G3DSA:3.30.420.40 198 370 2.0E-30 T 28-03-2018 DDI_RS11195 e851243bec70926690490c0e65203458 370 Gene3D G3DSA:3.30.420.40 3 184 1.2E-54 T 28-03-2018 DDI_RS11195 e851243bec70926690490c0e65203458 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.26 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 DDI_RS11255 b54eab173fe22ec74f7ae8dcede09db7 457 PIRSF PIRSF006603 3 454 4.1E-61 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS11255 b54eab173fe22ec74f7ae8dcede09db7 457 Pfam PF01554 MatE 17 177 1.5E-39 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS11255 b54eab173fe22ec74f7ae8dcede09db7 457 Pfam PF01554 MatE 244 404 3.2E-36 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS11255 b54eab173fe22ec74f7ae8dcede09db7 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 3.1E-115 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS18830 ac92c60e5d3246cf95a12a02196ffda8 234 Gene3D G3DSA:3.40.630.30 88 234 3.6E-18 T 28-03-2018 DDI_RS18830 ac92c60e5d3246cf95a12a02196ffda8 234 SUPERFAMILY SSF55729 54 233 3.72E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS18830 ac92c60e5d3246cf95a12a02196ffda8 234 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 45 234 1.1E-78 T 28-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 DDI_RS18830 ac92c60e5d3246cf95a12a02196ffda8 234 Pfam PF00583 Acetyltransferase (GNAT) family 144 222 7.1E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS18830 ac92c60e5d3246cf95a12a02196ffda8 234 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 234 44.802 T 28-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 DDI_RS07705 441847260cd1a77a4cb5433292b4d316 365 SUPERFAMILY SSF161098 131 347 1.96E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07705 441847260cd1a77a4cb5433292b4d316 365 Gene3D G3DSA:1.10.3720.10 2 349 5.0E-36 T 28-03-2018 DDI_RS07705 441847260cd1a77a4cb5433292b4d316 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 3.8E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00965 3bb7cf221b44ffd3cf4218735c3a70c2 464 SUPERFAMILY SSF103473 258 453 9.81E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS00965 3bb7cf221b44ffd3cf4218735c3a70c2 464 SUPERFAMILY SSF103473 20 203 9.81E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS00965 3bb7cf221b44ffd3cf4218735c3a70c2 464 Pfam PF07690 Major Facilitator Superfamily 29 419 3.3E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS00965 3bb7cf221b44ffd3cf4218735c3a70c2 464 Gene3D G3DSA:1.20.1250.20 269 454 9.6E-24 T 28-03-2018 DDI_RS00965 3bb7cf221b44ffd3cf4218735c3a70c2 464 Gene3D G3DSA:1.20.1250.20 19 216 7.0E-28 T 28-03-2018 DDI_RS09795 6096087ef0521786df2241841990bc02 93 SUPERFAMILY SSF55229 32 84 1.96E-18 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DDI_RS09795 6096087ef0521786df2241841990bc02 93 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 1.5E-25 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DDI_RS09795 6096087ef0521786df2241841990bc02 93 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.7E-36 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DDI_RS09795 6096087ef0521786df2241841990bc02 93 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.567 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DDI_RS09795 6096087ef0521786df2241841990bc02 93 Gene3D G3DSA:3.30.1070.10 1 83 1.8E-29 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DDI_RS14010 09297b1c5336629468d8b9410cfc798f 206 Gene3D G3DSA:1.25.40.10 140 203 4.7E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS14010 09297b1c5336629468d8b9410cfc798f 206 Gene3D G3DSA:1.25.40.10 45 139 6.0E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS14010 09297b1c5336629468d8b9410cfc798f 206 PIRSF PIRSF006170 1 206 8.7E-58 T 28-03-2018 IPR026039 Uncharacterised protein family UPF0070 DDI_RS14010 09297b1c5336629468d8b9410cfc798f 206 SUPERFAMILY SSF48452 88 191 1.63E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS14010 09297b1c5336629468d8b9410cfc798f 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.9E-60 T 28-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 DDI_RS13025 a124300270db6ffa95cf23648f8ebc3a 329 SUPERFAMILY SSF53807 29 313 3.92E-43 T 28-03-2018 DDI_RS13025 a124300270db6ffa95cf23648f8ebc3a 329 Pfam PF01497 Periplasmic binding protein 54 303 3.5E-23 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 DDI_RS13025 a124300270db6ffa95cf23648f8ebc3a 329 Gene3D G3DSA:3.40.50.1980 22 159 3.2E-24 T 28-03-2018 DDI_RS13025 a124300270db6ffa95cf23648f8ebc3a 329 Gene3D G3DSA:3.40.50.1980 160 327 1.2E-25 T 28-03-2018 DDI_RS10475 fbb43e2f127747bebc0bdfab2ef87500 486 Gene3D G3DSA:3.40.605.10 1 270 1.7E-103 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 DDI_RS10475 fbb43e2f127747bebc0bdfab2ef87500 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 DDI_RS10475 fbb43e2f127747bebc0bdfab2ef87500 486 Pfam PF00171 Aldehyde dehydrogenase family 20 477 4.7E-171 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 DDI_RS10475 fbb43e2f127747bebc0bdfab2ef87500 486 Gene3D G3DSA:3.40.309.10 271 464 1.6E-74 T 28-03-2018 DDI_RS10475 fbb43e2f127747bebc0bdfab2ef87500 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 DDI_RS10475 fbb43e2f127747bebc0bdfab2ef87500 486 SUPERFAMILY SSF53720 5 482 2.62E-173 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 DDI_RS10475 fbb43e2f127747bebc0bdfab2ef87500 486 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 2.1E-219 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 DDI_RS14600 d4cf174f11a53dff437039f907b41043 77 Pfam PF00462 Glutaredoxin 3 61 9.7E-14 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DDI_RS14600 d4cf174f11a53dff437039f907b41043 77 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 1.5E-25 T 28-03-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 DDI_RS14600 d4cf174f11a53dff437039f907b41043 77 SUPERFAMILY SSF52833 1 70 5.72E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS14600 d4cf174f11a53dff437039f907b41043 77 Gene3D G3DSA:3.40.30.10 1 77 1.6E-14 T 28-03-2018 DDI_RS16435 ca1381f8bb49b7417df932452fd2800f 1280 SUPERFAMILY SSF48371 833 966 5.76E-5 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 DDI_RS16435 ca1381f8bb49b7417df932452fd2800f 1280 SUPERFAMILY SSF48371 724 773 5.76E-5 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 DDI_RS16435 ca1381f8bb49b7417df932452fd2800f 1280 SUPERFAMILY SSF48371 570 643 5.76E-5 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 DDI_RS16435 ca1381f8bb49b7417df932452fd2800f 1280 SUPERFAMILY SSF48371 673 689 5.76E-5 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 DDI_RS00670 befe3bef4e7fc73fb6b0539e325a9881 447 Gene3D G3DSA:3.90.1300.10 2 447 5.3E-104 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS00670 befe3bef4e7fc73fb6b0539e325a9881 447 SUPERFAMILY SSF75304 4 444 7.46E-107 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS00670 befe3bef4e7fc73fb6b0539e325a9881 447 Pfam PF01425 Amidase 30 435 5.8E-79 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DDI_RS13700 7915059085cdf4e46b32582f078206ed 284 SUPERFAMILY SSF51658 49 266 2.49E-38 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS13700 7915059085cdf4e46b32582f078206ed 284 Pfam PF01261 Xylose isomerase-like TIM barrel 55 238 2.8E-17 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS13700 7915059085cdf4e46b32582f078206ed 284 Gene3D G3DSA:3.20.20.150 27 284 2.1E-38 T 28-03-2018 DDI_RS01445 27850ba1cb24be2a4cbf67b4d51a079f 468 Pfam PF02397 Bacterial sugar transferase 278 460 2.2E-63 T 28-03-2018 IPR003362 Bacterial sugar transferase DDI_RS01445 27850ba1cb24be2a4cbf67b4d51a079f 468 Gene3D G3DSA:3.40.50.720 141 267 2.1E-8 T 28-03-2018 DDI_RS01445 27850ba1cb24be2a4cbf67b4d51a079f 468 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 28 468 5.7E-156 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 DDI_RS01445 27850ba1cb24be2a4cbf67b4d51a079f 468 Pfam PF13727 CoA-binding domain 74 242 4.3E-22 T 28-03-2018 DDI_RS01445 27850ba1cb24be2a4cbf67b4d51a079f 468 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 468 9.4E-132 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DDI_RS01040 75506957c991684be37b8608c46f848c 515 SUPERFAMILY SSF53850 33 515 2.25E-117 T 28-03-2018 DDI_RS01040 75506957c991684be37b8608c46f848c 515 PIRSF PIRSF002741 11 512 2.4E-85 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS01040 75506957c991684be37b8608c46f848c 515 Gene3D G3DSA:3.90.76.10 46 190 7.9E-34 T 28-03-2018 DDI_RS01040 75506957c991684be37b8608c46f848c 515 Gene3D G3DSA:3.40.190.10 191 289 7.7E-26 T 28-03-2018 DDI_RS01040 75506957c991684be37b8608c46f848c 515 Gene3D G3DSA:3.10.105.10 290 488 7.7E-39 T 28-03-2018 DDI_RS01040 75506957c991684be37b8608c46f848c 515 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 438 1.5E-84 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS12615 e2ce9b14c0d4bd30ff869307a0e7cd19 188 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 41 179 1.0E-34 T 28-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE DDI_RS12615 e2ce9b14c0d4bd30ff869307a0e7cd19 188 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 41 179 1.5E-50 T 28-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE DDI_RS12615 e2ce9b14c0d4bd30ff869307a0e7cd19 188 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 37 180 8.0E-44 T 28-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE DDI_RS02620 274b6ec0744a351647305625c900e1de 384 SUPERFAMILY SSF51604 113 381 2.49E-61 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS02620 274b6ec0744a351647305625c900e1de 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 30 125 1.2E-8 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DDI_RS02620 274b6ec0744a351647305625c900e1de 384 Pfam PF13378 Enolase C-terminal domain-like 154 372 8.5E-46 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS02620 274b6ec0744a351647305625c900e1de 384 SMART SM00922 150 253 8.8E-17 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS02620 274b6ec0744a351647305625c900e1de 384 SUPERFAMILY SSF54826 2 127 6.57E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS02620 274b6ec0744a351647305625c900e1de 384 Gene3D G3DSA:3.20.20.120 132 372 6.3E-48 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS02620 274b6ec0744a351647305625c900e1de 384 Gene3D G3DSA:3.30.390.10 1 131 9.7E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS06930 8869434ec228f5d6f4e7e884477083b2 238 Gene3D G3DSA:1.20.58.430 22 223 4.1E-36 T 28-03-2018 DDI_RS06930 8869434ec228f5d6f4e7e884477083b2 238 SUPERFAMILY SSF101082 22 221 9.94E-38 T 28-03-2018 IPR023220 Type IV secretion system, VirB5-domain DDI_RS06930 8869434ec228f5d6f4e7e884477083b2 238 Pfam PF07996 Type IV secretion system proteins 22 221 3.4E-48 T 28-03-2018 IPR014158 Type IV secretion system, VirB5 DDI_RS07895 ae1719f1601cf97a1c69296a9c9d51b9 374 SUPERFAMILY SSF50952 30 370 2.09E-46 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 DDI_RS07895 ae1719f1601cf97a1c69296a9c9d51b9 374 Gene3D G3DSA:2.120.10.30 277 366 2.9E-18 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like DDI_RS07895 ae1719f1601cf97a1c69296a9c9d51b9 374 Gene3D G3DSA:2.120.10.30 21 276 5.4E-51 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like DDI_RS07895 ae1719f1601cf97a1c69296a9c9d51b9 374 Pfam PF07995 Glucose / Sorbosone dehydrogenase 37 369 4.9E-132 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase DDI_RS00515 b5b9dfac38d4fc914f7de46e25105ef3 139 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.9E-64 T 28-03-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 DDI_RS00515 b5b9dfac38d4fc914f7de46e25105ef3 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 1.5E-30 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 DDI_RS17475 576f22a0c53cfd82a67e97ed0b0502d9 507 TIGRFAM TIGR00819 ydaH: AbgT transporter family 8 506 2.0E-228 T 28-03-2018 IPR011540 AbgT, Proteobacteria GO:0015558|GO:1902604 DDI_RS17475 576f22a0c53cfd82a67e97ed0b0502d9 507 Pfam PF03806 AbgT putative transporter family 15 506 3.8E-192 T 28-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 DDI_RS00315 3cdebf7eaf0001c650de0524c9a80c04 376 SUPERFAMILY SSF52540 63 209 1.32E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00315 3cdebf7eaf0001c650de0524c9a80c04 376 Gene3D G3DSA:3.40.50.300 53 372 1.7E-12 T 28-03-2018 DDI_RS00315 3cdebf7eaf0001c650de0524c9a80c04 376 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 376 53.556 T 28-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 DDI_RS00315 3cdebf7eaf0001c650de0524c9a80c04 376 Pfam PF03969 AFG1-like ATPase 4 372 1.5E-147 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 DDI_RS14715 dd212582a7d49e507296300ecdb29038 112 SUPERFAMILY SSF69754 3 104 2.62E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 DDI_RS14715 dd212582a7d49e507296300ecdb29038 112 Gene3D G3DSA:3.30.160.100 2 92 8.9E-27 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 DDI_RS14715 dd212582a7d49e507296300ecdb29038 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.9E-34 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 DDI_RS14715 dd212582a7d49e507296300ecdb29038 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 2.0E-22 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 DDI_RS01745 2f8d9261003874aebc28b6ff318772bc 323 SUPERFAMILY SSF143631 7 306 1.96E-89 T 28-03-2018 IPR003374 ApbE-like domain DDI_RS01745 2f8d9261003874aebc28b6ff318772bc 323 Pfam PF02424 ApbE family 15 294 3.4E-77 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 DDI_RS01745 2f8d9261003874aebc28b6ff318772bc 323 Gene3D G3DSA:3.10.520.10 10 310 2.3E-50 T 28-03-2018 DDI_RS01745 2f8d9261003874aebc28b6ff318772bc 323 PIRSF PIRSF006268 2 315 8.4E-92 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 DDI_RS02800 2db8980ab2855d03169d83cfe3add428 296 Gene3D G3DSA:3.20.20.150 1 293 1.8E-50 T 28-03-2018 DDI_RS02800 2db8980ab2855d03169d83cfe3add428 296 SUPERFAMILY SSF51658 5 288 2.07E-54 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS02800 2db8980ab2855d03169d83cfe3add428 296 Pfam PF01261 Xylose isomerase-like TIM barrel 32 243 1.1E-26 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDI_RS02800 2db8980ab2855d03169d83cfe3add428 296 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 2 288 2.0E-128 T 28-03-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 DDI_RS05360 63c06fb2680eba20c678a4537fa57b1b 378 Gene3D G3DSA:1.20.5.70 345 374 2.0E-16 T 28-03-2018 DDI_RS05360 63c06fb2680eba20c678a4537fa57b1b 378 Gene3D G3DSA:3.30.1950.10 89 160 2.4E-23 T 28-03-2018 DDI_RS05360 63c06fb2680eba20c678a4537fa57b1b 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 165 3.0E-25 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 DDI_RS05360 63c06fb2680eba20c678a4537fa57b1b 378 Pfam PF10531 SLBB domain 173 220 4.9E-6 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05360 63c06fb2680eba20c678a4537fa57b1b 378 Pfam PF10531 SLBB domain 256 305 8.4E-4 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05360 63c06fb2680eba20c678a4537fa57b1b 378 Gene3D G3DSA:3.10.560.10 252 344 1.6E-15 T 28-03-2018 DDI_RS05360 63c06fb2680eba20c678a4537fa57b1b 378 Gene3D G3DSA:3.10.560.10 161 251 2.3E-24 T 28-03-2018 DDI_RS10155 493088c661aac2880da0d559faf01055 106 Pfam PF15569 Immunity protein 40 25 89 2.4E-8 T 28-03-2018 IPR029080 Immunity protein 40 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 Gene3D G3DSA:3.40.50.620 64 230 3.0E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 Gene3D G3DSA:3.40.50.300 231 399 9.4E-16 T 28-03-2018 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 3.0E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 Pfam PF13521 AAA domain 234 394 2.0E-31 T 28-03-2018 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 PIRSF PIRSF004776 4 414 6.2E-208 T 28-03-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 SUPERFAMILY SSF52374 64 222 1.61E-17 T 28-03-2018 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 SUPERFAMILY SSF52540 232 402 1.53E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 3.6E-155 T 28-03-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 Gene3D G3DSA:1.10.260.40 4 63 2.6E-10 T 28-03-2018 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 SUPERFAMILY SSF47413 6 62 4.74E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 SMART SM00530 6 62 2.8E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS01220 6c29fd7c31d02ce18eabcf331e4a005c 418 Pfam PF01381 Helix-turn-helix 7 61 4.7E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS19910 acf68f75a07f5b8f1640ea579190d3b6 296 SUPERFAMILY SSF53822 26 296 1.66E-85 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS19910 acf68f75a07f5b8f1640ea579190d3b6 296 Gene3D G3DSA:3.40.50.2300 132 296 2.7E-44 T 28-03-2018 DDI_RS19910 acf68f75a07f5b8f1640ea579190d3b6 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.4E-57 T 28-03-2018 IPR025997 Periplasmic binding protein DDI_RS19910 acf68f75a07f5b8f1640ea579190d3b6 296 Gene3D G3DSA:3.40.50.2300 27 131 1.9E-24 T 28-03-2018 DDI_RS19260 34b2b09f7e187a91cf31509dba3ebf1f 282 SUPERFAMILY SSF161098 4 278 2.15E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19260 34b2b09f7e187a91cf31509dba3ebf1f 282 Gene3D G3DSA:1.10.3720.10 3 271 1.4E-31 T 28-03-2018 DDI_RS19260 34b2b09f7e187a91cf31509dba3ebf1f 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 277 2.0E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14910 1ff1c2c21dae1a656eb518fcbd241163 715 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 485 613 6.2E-34 T 28-03-2018 IPR025299 CstA, C-terminal domain DDI_RS14910 1ff1c2c21dae1a656eb518fcbd241163 715 Pfam PF02554 Carbon starvation protein CstA 33 402 4.0E-162 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 DDI_RS03090 e2675980ad01866bdd14cefd72ad6620 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.028 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS03090 e2675980ad01866bdd14cefd72ad6620 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.9E-83 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS03090 e2675980ad01866bdd14cefd72ad6620 217 Gene3D G3DSA:3.90.870.10 3 217 8.0E-92 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain DDI_RS03090 e2675980ad01866bdd14cefd72ad6620 217 SUPERFAMILY SSF55821 7 211 4.58E-86 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain DDI_RS03090 e2675980ad01866bdd14cefd72ad6620 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 3.3E-82 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDI_RS05855 4565c8f763c3b72b33498bd365227652 85 Pfam PF13711 Domain of unknown function (DUF4160) 9 74 1.8E-15 T 28-03-2018 IPR025427 Protein of unknown function DUF4160 DDI_RS01110 834149e5768c4790ab3f1ea4e60fa007 173 Pfam PF01817 Chorismate mutase type II 19 88 1.2E-9 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS01110 834149e5768c4790ab3f1ea4e60fa007 173 SMART SM00830 10 90 1.8E-15 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS01110 834149e5768c4790ab3f1ea4e60fa007 173 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 16 126 2.7E-36 T 28-03-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS01110 834149e5768c4790ab3f1ea4e60fa007 173 SUPERFAMILY SSF48600 19 170 2.42E-34 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS01110 834149e5768c4790ab3f1ea4e60fa007 173 Gene3D G3DSA:1.20.59.10 15 96 8.7E-18 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS01110 834149e5768c4790ab3f1ea4e60fa007 173 PIRSF PIRSF026640 1 173 6.9E-49 T 28-03-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDI_RS04870 0be3c0a977187c1a3c89e4dd368f852d 241 SUPERFAMILY SSF52540 1 235 2.85E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS04870 0be3c0a977187c1a3c89e4dd368f852d 241 PIRSF PIRSF039085 1 241 2.7E-104 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDI_RS04870 0be3c0a977187c1a3c89e4dd368f852d 241 Gene3D G3DSA:3.40.50.300 1 239 1.7E-69 T 28-03-2018 DDI_RS04870 0be3c0a977187c1a3c89e4dd368f852d 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS04870 0be3c0a977187c1a3c89e4dd368f852d 241 Pfam PF00005 ABC transporter 17 165 2.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS04870 0be3c0a977187c1a3c89e4dd368f852d 241 SMART SM00382 26 213 1.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05450 05661a1812cdb48c867fd469a4cd1d54 329 Pfam PF12996 DUF based on E. rectale Gene description (DUF3880) 111 177 4.2E-6 T 28-03-2018 IPR024542 Domain of unknown function DUF3880 DDI_RS05450 05661a1812cdb48c867fd469a4cd1d54 329 SUPERFAMILY SSF53756 6 325 6.07E-7 T 28-03-2018 DDI_RS05450 05661a1812cdb48c867fd469a4cd1d54 329 Gene3D G3DSA:3.40.50.2000 5 314 5.8E-10 T 28-03-2018 DDI_RS05450 05661a1812cdb48c867fd469a4cd1d54 329 Pfam PF13524 Glycosyl transferases group 1 230 325 3.7E-20 T 28-03-2018 DDI_RS03295 607aab7aa572ff33af4536a1181eb89e 131 Pfam PF01638 HxlR-like helix-turn-helix 26 113 3.6E-28 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type DDI_RS03295 607aab7aa572ff33af4536a1181eb89e 131 Gene3D G3DSA:1.10.10.10 23 124 6.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03295 607aab7aa572ff33af4536a1181eb89e 131 SUPERFAMILY SSF46785 10 113 2.25E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS06765 927cebd2eda9ecdf0b304fe159513df5 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06765 927cebd2eda9ecdf0b304fe159513df5 252 SUPERFAMILY SSF52540 2 234 1.02E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06765 927cebd2eda9ecdf0b304fe159513df5 252 SMART SM00382 36 222 2.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06765 927cebd2eda9ecdf0b304fe159513df5 252 Pfam PF00005 ABC transporter 27 173 4.7E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06765 927cebd2eda9ecdf0b304fe159513df5 252 Gene3D G3DSA:3.40.50.300 1 250 8.8E-61 T 28-03-2018 DDI_RS21480 5a678cc2285b1ce5af70701c7526df7d 63 Pfam PF06568 Domain of unknown function (DUF1127) 22 58 6.0E-12 T 28-03-2018 IPR009506 Protein of unknown function DUF1127 DDI_RS11110 7828e2fbbe28d3e3b818dec5e421ea64 688 Pfam PF02554 Carbon starvation protein CstA 32 409 6.2E-171 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 DDI_RS11110 7828e2fbbe28d3e3b818dec5e421ea64 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 7.1E-32 T 28-03-2018 IPR025299 CstA, C-terminal domain DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 1.3E-7 T 28-03-2018 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-7 T 28-03-2018 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 1.3E-7 T 28-03-2018 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 4.6E-15 T 28-03-2018 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.6E-15 T 28-03-2018 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 4.6E-15 T 28-03-2018 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 116 134 4.6E-15 T 28-03-2018 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 339 4.1E-66 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 SUPERFAMILY SSF51905 7 225 5.39E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 Gene3D G3DSA:3.50.50.60 6 160 2.4E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 Gene3D G3DSA:3.50.50.60 162 368 3.2E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS11675 aeea7ca62fc2afe43fd8f88fc0305250 435 SUPERFAMILY SSF51905 169 352 1.1E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS02880 54fddfda19cdb0633f5bd1a9456ef32e 86 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 24 73 4.3E-19 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA DDI_RS02880 54fddfda19cdb0633f5bd1a9456ef32e 86 Gene3D G3DSA:1.10.10.10 26 86 1.2E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12390 a0f1308e0e491b31fb4e12d76dfc4b2e 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 1.8E-38 T 28-03-2018 DDI_RS08170 5640b362d2dcee1b10ad104fa73ede67 587 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.8E-80 T 28-03-2018 IPR003776 YcaO-like domain DDI_RS08170 5640b362d2dcee1b10ad104fa73ede67 587 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 7.1E-161 T 28-03-2018 IPR003776 YcaO-like domain DDI_RS18815 9805ec376838fca658eb1848400886fd 361 SUPERFAMILY SSF53756 77 352 9.42E-6 T 28-03-2018 DDI_RS18815 9805ec376838fca658eb1848400886fd 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 356 2.6E-172 T 28-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 DDI_RS18815 9805ec376838fca658eb1848400886fd 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 65.153 T 28-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 DDI_RS18815 9805ec376838fca658eb1848400886fd 361 Gene3D G3DSA:3.40.50.2000 40 338 2.1E-6 T 28-03-2018 DDI_RS04825 f744fb6f48bdc0a21d2117901261c997 370 Pfam PF01098 Cell cycle protein 21 364 3.2E-124 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 DDI_RS04825 f744fb6f48bdc0a21d2117901261c997 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 6.3E-138 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 DDI_RS04825 f744fb6f48bdc0a21d2117901261c997 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 SUPERFAMILY SSF52540 7 223 1.6E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 SUPERFAMILY SSF50331 234 350 1.83E-22 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 9.0E-148 T 28-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 Gene3D G3DSA:2.40.50.100 282 349 2.5E-20 T 28-03-2018 DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 290 351 2.5E-16 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 SMART SM00382 23 206 7.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 Gene3D G3DSA:3.40.50.300 10 281 1.2E-54 T 28-03-2018 DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 Pfam PF03459 TOBE domain 290 350 4.2E-17 T 28-03-2018 IPR005116 Transport-associated OB, type 1 DDI_RS05285 e62a8bd25ddbbc89a1e36826b3e94458 352 Pfam PF00005 ABC transporter 16 156 2.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Gene3D G3DSA:2.60.40.1180 227 298 1.2E-9 T 28-03-2018 DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Gene3D G3DSA:2.60.40.1180 164 226 3.6E-11 T 28-03-2018 DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Gene3D G3DSA:2.60.40.1180 325 455 4.1E-18 T 28-03-2018 DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 151 183 100.0 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 346 381 0.044 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 248 284 2.9E-5 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 80 115 2.3E-5 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 184 219 3.9E-6 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 220 247 84.0 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 314 345 130.0 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 382 417 0.0066 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SMART SM00671 40 71 6.8 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SUPERFAMILY SSF81901 231 425 2.88E-27 T 28-03-2018 DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Pfam PF08238 Sel1 repeat 169 183 120.0 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Pfam PF08238 Sel1 repeat 249 283 0.0017 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Pfam PF08238 Sel1 repeat 231 246 4.7 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Pfam PF08238 Sel1 repeat 81 115 1.4E-6 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Pfam PF08238 Sel1 repeat 349 378 53.0 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Pfam PF08238 Sel1 repeat 384 416 8.2E-7 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Pfam PF08238 Sel1 repeat 41 70 1.6 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Pfam PF08238 Sel1 repeat 185 218 2.2E-4 T 28-03-2018 IPR006597 Sel1-like repeat DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SUPERFAMILY SSF81901 138 228 1.7E-16 T 28-03-2018 DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 Gene3D G3DSA:1.25.40.10 27 141 1.2E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS06660 6f4d74a2c117dee45acbdc92a8334a0f 455 SUPERFAMILY SSF81901 31 123 1.57E-13 T 28-03-2018 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.4E-40 T 28-03-2018 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 Gene3D G3DSA:1.10.260.40 2 54 1.9E-20 T 28-03-2018 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 Gene3D G3DSA:3.40.50.2300 55 176 3.3E-31 T 28-03-2018 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.4E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 SUPERFAMILY SSF53822 60 337 3.44E-96 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 Gene3D G3DSA:3.40.50.2300 177 335 5.3E-48 T 28-03-2018 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 SMART SM00354 1 71 7.4E-36 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 60.759 T 28-03-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 DDI_RS11240 d9736638e82d9adf90dcffa96d443ed2 341 SUPERFAMILY SSF47413 1 59 1.23E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS00655 d6838011dff242211734bda1ab54c4e4 309 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 9.3E-86 T 28-03-2018 IPR007296 Domain of unknown function DUF403 DDI_RS11770 af05c7ccb6e14c16f13d29e18fab285b 348 SUPERFAMILY SSF53659 4 344 1.77E-100 T 28-03-2018 DDI_RS11770 af05c7ccb6e14c16f13d29e18fab285b 348 Pfam PF02504 Fatty acid synthesis protein 5 335 1.8E-113 T 28-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DDI_RS11770 af05c7ccb6e14c16f13d29e18fab285b 348 Gene3D G3DSA:3.40.718.10 1 345 4.1E-112 T 28-03-2018 DDI_RS11770 af05c7ccb6e14c16f13d29e18fab285b 348 PIRSF PIRSF002465 2 348 4.2E-121 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DDI_RS11770 af05c7ccb6e14c16f13d29e18fab285b 348 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 346 1.3E-128 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DDI_RS11770 af05c7ccb6e14c16f13d29e18fab285b 348 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 348 139.415 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DDI_RS12000 79547d75b9e46eba7a6f8eac0f39cc01 245 PRINTS PR01003 Flagellar assembly protein FliH signature 150 172 2.1E-68 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DDI_RS12000 79547d75b9e46eba7a6f8eac0f39cc01 245 PRINTS PR01003 Flagellar assembly protein FliH signature 132 149 2.1E-68 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DDI_RS12000 79547d75b9e46eba7a6f8eac0f39cc01 245 PRINTS PR01003 Flagellar assembly protein FliH signature 173 200 2.1E-68 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DDI_RS12000 79547d75b9e46eba7a6f8eac0f39cc01 245 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 2.1E-68 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DDI_RS12000 79547d75b9e46eba7a6f8eac0f39cc01 245 PRINTS PR01003 Flagellar assembly protein FliH signature 112 131 2.1E-68 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DDI_RS12000 79547d75b9e46eba7a6f8eac0f39cc01 245 PRINTS PR01003 Flagellar assembly protein FliH signature 201 217 2.1E-68 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DDI_RS12000 79547d75b9e46eba7a6f8eac0f39cc01 245 PRINTS PR01003 Flagellar assembly protein FliH signature 218 243 2.1E-68 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DDI_RS12000 79547d75b9e46eba7a6f8eac0f39cc01 245 Pfam PF02108 Flagellar assembly protein FliH 111 236 1.9E-39 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DDI_RS04820 a9b26895f08100447b17561270a14cbe 387 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 178 9.0E-31 T 28-03-2018 IPR012997 Rare lipoprotein A DDI_RS04820 a9b26895f08100447b17561270a14cbe 387 Gene3D G3DSA:2.40.40.10 56 170 1.1E-16 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDI_RS04820 a9b26895f08100447b17561270a14cbe 387 Gene3D G3DSA:3.30.70.1070 307 382 2.5E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS04820 a9b26895f08100447b17561270a14cbe 387 Pfam PF05036 Sporulation related domain 310 380 2.2E-13 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS04820 a9b26895f08100447b17561270a14cbe 387 Pfam PF03330 Lytic transglycolase 78 165 3.7E-21 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDI_RS04820 a9b26895f08100447b17561270a14cbe 387 SUPERFAMILY SSF110997 311 380 6.15E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 DDI_RS04820 a9b26895f08100447b17561270a14cbe 387 SUPERFAMILY SSF50685 75 166 1.99E-7 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDI_RS04820 a9b26895f08100447b17561270a14cbe 387 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 167 22.186 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 DDI_RS08165 2a563614e9f08d38e9aa16c3c1f7b815 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 2.3E-92 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 DDI_RS08165 2a563614e9f08d38e9aa16c3c1f7b815 285 Gene3D G3DSA:1.20.1080.10 12 285 1.6E-77 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DDI_RS08165 2a563614e9f08d38e9aa16c3c1f7b815 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site DDI_RS08165 2a563614e9f08d38e9aa16c3c1f7b815 285 Pfam PF01226 Formate/nitrite transporter 15 275 1.1E-74 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 DDI_RS08165 2a563614e9f08d38e9aa16c3c1f7b815 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site DDI_RS08165 2a563614e9f08d38e9aa16c3c1f7b815 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 4.3E-124 T 28-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 DDI_RS02535 f1146efcca9305f9f4a24732d328bd5f 324 Gene3D G3DSA:3.40.50.720 1 175 7.9E-33 T 28-03-2018 DDI_RS02535 f1146efcca9305f9f4a24732d328bd5f 324 SUPERFAMILY SSF51735 2 311 3.86E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02535 f1146efcca9305f9f4a24732d328bd5f 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 219 2.4E-33 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDI_RS02535 f1146efcca9305f9f4a24732d328bd5f 324 Gene3D G3DSA:3.90.25.10 176 323 1.1E-18 T 28-03-2018 DDI_RS06410 1890a4d99b968d9a21139aba76be05de 254 SUPERFAMILY SSF54197 34 253 4.59E-80 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 DDI_RS06410 1890a4d99b968d9a21139aba76be05de 254 Gene3D G3DSA:3.30.428.30 31 252 8.1E-79 T 28-03-2018 DDI_RS06410 1890a4d99b968d9a21139aba76be05de 254 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 34 252 1.3E-81 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 DDI_RS06410 1890a4d99b968d9a21139aba76be05de 254 PIRSF PIRSF001273 2 254 3.0E-70 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 Gene3D G3DSA:1.10.1040.10 297 504 1.8E-69 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 SUPERFAMILY SSF51735 19 297 5.12E-94 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 231 476 1.2E-95 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 Gene3D G3DSA:3.40.50.720 15 296 3.4E-105 T 28-03-2018 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 PRINTS PR00084 Mannitol dehydrogenase signature 194 207 3.1E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 PRINTS PR00084 Mannitol dehydrogenase signature 263 278 3.1E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 PRINTS PR00084 Mannitol dehydrogenase signature 233 246 3.1E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 PRINTS PR00084 Mannitol dehydrogenase signature 42 52 3.1E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 SUPERFAMILY SSF48179 298 503 1.8E-68 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 41 203 1.1E-42 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DDI_RS02665 5080b472ebff5b074bf99a03e30adfb6 504 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 233 245 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DDI_RS13780 3e3d426e97bca5238b5e40b879298d08 153 Pfam PF04612 Type II secretion system (T2SS), protein M 5 146 7.7E-9 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 DDI_RS13780 3e3d426e97bca5238b5e40b879298d08 153 SUPERFAMILY SSF103054 74 147 3.4E-9 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain DDI_RS13780 3e3d426e97bca5238b5e40b879298d08 153 Gene3D G3DSA:3.30.1360.100 73 147 3.6E-11 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain DDI_RS14310 62a1dbb55144634dacca62ccd097e32a 247 Pfam PF05175 Methyltransferase small domain 46 171 4.8E-12 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 DDI_RS14310 62a1dbb55144634dacca62ccd097e32a 247 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS14310 62a1dbb55144634dacca62ccd097e32a 247 Gene3D G3DSA:3.40.50.150 34 241 1.1E-32 T 28-03-2018 DDI_RS14310 62a1dbb55144634dacca62ccd097e32a 247 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 148 172 6.5E-6 T 28-03-2018 DDI_RS14310 62a1dbb55144634dacca62ccd097e32a 247 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 50 64 6.5E-6 T 28-03-2018 DDI_RS14310 62a1dbb55144634dacca62ccd097e32a 247 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 118 130 6.5E-6 T 28-03-2018 DDI_RS14310 62a1dbb55144634dacca62ccd097e32a 247 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 13 247 53.873 T 28-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 DDI_RS14310 62a1dbb55144634dacca62ccd097e32a 247 SUPERFAMILY SSF53335 11 191 1.96E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS16225 f16b0da42364708755b458c720d95e18 308 Pfam PF11300 Protein of unknown function (DUF3102) 64 171 4.2E-6 T 28-03-2018 IPR021451 Protein of unknown function DUF3102 DDI_RS16225 f16b0da42364708755b458c720d95e18 308 Gene3D G3DSA:1.20.5.170 154 276 0.0018 T 28-03-2018 DDI_RS20695 6a4084cce86e324ea633ef19dd8efba3 297 Pfam PF00892 EamA-like transporter family 143 274 1.6E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS20695 6a4084cce86e324ea633ef19dd8efba3 297 Pfam PF00892 EamA-like transporter family 6 129 3.7E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS20695 6a4084cce86e324ea633ef19dd8efba3 297 SUPERFAMILY SSF103481 36 130 1.44E-9 T 28-03-2018 DDI_RS20695 6a4084cce86e324ea633ef19dd8efba3 297 SUPERFAMILY SSF103481 175 275 7.72E-12 T 28-03-2018 DDI_RS20695 6a4084cce86e324ea633ef19dd8efba3 297 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 14 272 1.9E-76 T 28-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 DDI_RS20265 75299bf5cece6c75d39c9fdb6f89d9e6 257 Pfam PF12706 Beta-lactamase superfamily domain 20 220 9.0E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS20265 75299bf5cece6c75d39c9fdb6f89d9e6 257 Gene3D G3DSA:3.60.15.10 1 257 1.0E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS20265 75299bf5cece6c75d39c9fdb6f89d9e6 257 SUPERFAMILY SSF56281 1 254 4.46E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS10435 4dd24b5d2875e26ddbaf5cfa6968742f 328 SUPERFAMILY SSF161098 99 309 6.28E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10435 4dd24b5d2875e26ddbaf5cfa6968742f 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 326 1.1E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10435 4dd24b5d2875e26ddbaf5cfa6968742f 328 Gene3D G3DSA:1.10.3720.10 2 315 1.4E-47 T 28-03-2018 DDI_RS06160 a97d48764264857d25027909a115e5ab 340 SUPERFAMILY SSF81345 16 335 4.58E-76 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS06160 a97d48764264857d25027909a115e5ab 340 Gene3D G3DSA:1.10.3470.10 13 340 3.3E-60 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS06160 a97d48764264857d25027909a115e5ab 340 Pfam PF01032 FecCD transport family 25 335 6.1E-89 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 DDI_RS17695 5286323dd914fe8fd7ed077115e114bd 88 Pfam PF00550 Phosphopantetheine attachment site 33 82 2.5E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS17695 5286323dd914fe8fd7ed077115e114bd 88 SUPERFAMILY SSF47336 34 78 2.09E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS17695 5286323dd914fe8fd7ed077115e114bd 88 Gene3D G3DSA:1.10.1200.10 19 83 6.8E-10 T 28-03-2018 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 3.7E-6 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 SUPERFAMILY SSF53623 13 285 5.49E-88 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 412 8.6E-103 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 Gene3D G3DSA:3.40.1190.10 3 287 1.5E-78 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 Gene3D G3DSA:3.90.190.20 288 422 1.8E-29 T 28-03-2018 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 Pfam PF08245 Mur ligase middle domain 54 219 1.0E-9 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 PIRSF PIRSF001563 6 419 1.6E-105 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DDI_RS12835 3a619a0c2aca2105759cd99accf10df6 422 SUPERFAMILY SSF53244 286 414 2.62E-34 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDI_RS12280 d3041222f91937d193580dccada12c51 481 SUPERFAMILY SSF51395 40 299 3.66E-20 T 28-03-2018 DDI_RS12280 d3041222f91937d193580dccada12c51 481 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 30 468 2.9E-199 T 28-03-2018 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DDI_RS12280 d3041222f91937d193580dccada12c51 481 Gene3D G3DSA:3.20.20.70 28 472 8.4E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS05060 6c5e448dc9a642ae639cbecad8929b4b 319 Pfam PF08349 Protein of unknown function (DUF1722) 193 310 5.0E-43 T 28-03-2018 IPR013560 Domain of unknown function DUF1722 DDI_RS05060 6c5e448dc9a642ae639cbecad8929b4b 319 Pfam PF04463 Protein of unknown function (DUF523) 8 150 5.7E-37 T 28-03-2018 IPR007553 Domain of unknown function DUF523 DDI_RS05060 6c5e448dc9a642ae639cbecad8929b4b 319 PIRSF PIRSF037004 1 319 6.2E-131 T 28-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 DDI_RS21260 9f7ef29591c91289b0fc8e2fc040ba04 202 Pfam PF02036 SCP-2 sterol transfer family 15 113 2.7E-22 T 28-03-2018 IPR003033 SCP2 sterol-binding domain DDI_RS21260 9f7ef29591c91289b0fc8e2fc040ba04 202 Gene3D G3DSA:3.30.1050.10 7 120 3.5E-7 T 28-03-2018 IPR003033 SCP2 sterol-binding domain DDI_RS21260 9f7ef29591c91289b0fc8e2fc040ba04 202 SUPERFAMILY SSF55718 8 116 2.5E-9 T 28-03-2018 IPR003033 SCP2 sterol-binding domain DDI_RS18955 7aa3fe47528618993f863a8a281a8ade 403 ProSitePatterns PS00217 Sugar transport proteins signature 2. 107 132 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDI_RS18955 7aa3fe47528618993f863a8a281a8ade 403 SUPERFAMILY SSF103473 5 387 1.44E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS18955 7aa3fe47528618993f863a8a281a8ade 403 Gene3D G3DSA:1.20.1250.20 8 201 4.6E-35 T 28-03-2018 DDI_RS18955 7aa3fe47528618993f863a8a281a8ade 403 Gene3D G3DSA:1.20.1250.20 206 398 3.0E-21 T 28-03-2018 DDI_RS18955 7aa3fe47528618993f863a8a281a8ade 403 Pfam PF07690 Major Facilitator Superfamily 17 349 3.5E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS16695 ec4fbb997114a5bd78b592d57f0a9b78 173 Pfam PF05258 Protein of unknown function (DUF721) 26 91 7.7E-12 T 28-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 DDI_RS05890 e4fcb332083055e12511da0fb511bb62 549 Pfam PF00361 Proton-conducting membrane transporter 132 427 5.6E-55 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05890 e4fcb332083055e12511da0fb511bb62 549 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 4.7E-10 T 28-03-2018 DDI_RS05890 e4fcb332083055e12511da0fb511bb62 549 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 321 333 4.7E-10 T 28-03-2018 DDI_RS05890 e4fcb332083055e12511da0fb511bb62 549 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 4.7E-10 T 28-03-2018 DDI_RS05890 e4fcb332083055e12511da0fb511bb62 549 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 102 2.9E-7 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05740 bca4cbcf56f05826d94ad0032a9dac68 194 Pfam PF11198 Protein of unknown function (DUF2857) 6 183 3.2E-62 T 28-03-2018 IPR021364 Protein of unknown function DUF2857 DDI_RS09245 fdef5e0987ce4b9ec4e9c0f8049d813e 327 PIRSF PIRSF002816 2 326 1.8E-147 T 28-03-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 DDI_RS09245 fdef5e0987ce4b9ec4e9c0f8049d813e 327 Gene3D G3DSA:3.40.50.2300 5 129 2.1E-9 T 28-03-2018 DDI_RS09245 fdef5e0987ce4b9ec4e9c0f8049d813e 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 1.5E-85 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DDI_RS09245 fdef5e0987ce4b9ec4e9c0f8049d813e 327 SUPERFAMILY SSF53822 26 325 5.65E-68 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS09245 fdef5e0987ce4b9ec4e9c0f8049d813e 327 Gene3D G3DSA:3.40.50.2300 130 326 9.9E-18 T 28-03-2018 DDI_RS18175 8bffc88395963b49c9b1e0f2203f16e4 326 Gene3D G3DSA:1.10.3720.10 31 294 5.0E-45 T 28-03-2018 DDI_RS18175 8bffc88395963b49c9b1e0f2203f16e4 326 SUPERFAMILY SSF161098 68 274 4.71E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS18175 8bffc88395963b49c9b1e0f2203f16e4 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 283 1.3E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS18175 8bffc88395963b49c9b1e0f2203f16e4 326 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 70 183 7.0E-19 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS08080 ae71c63186d8c2c03d91f78920089a71 242 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 3.1E-72 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DDI_RS08080 ae71c63186d8c2c03d91f78920089a71 242 SUPERFAMILY SSF55729 3 228 2.33E-93 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS08080 ae71c63186d8c2c03d91f78920089a71 242 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 242 96.848 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DDI_RS08080 ae71c63186d8c2c03d91f78920089a71 242 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 216 1.2E-79 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DDI_RS19225 aa03aaaeac7fe4a5bc95d1b3eeb04b14 733 Gene3D G3DSA:1.25.40.10 117 732 0.021 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS17255 01fd475b2b893010bc8b4135d7380bc4 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 9.2E-21 T 28-03-2018 IPR019201 Protein of unknown function DUF2065 DDI_RS08305 335c3608069070072c27a4b510a8db81 302 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 33 298 6.7E-105 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDI_RS08305 335c3608069070072c27a4b510a8db81 302 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 302 167.756 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDI_RS08305 335c3608069070072c27a4b510a8db81 302 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 36 296 9.4E-82 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDI_RS02185 7d85f7fe8244192ea0428d24e4d5bf95 292 Pfam PF01136 Peptidase family U32 92 215 3.3E-12 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DDI_RS10565 59288107193f0dd3d6b0360fe03b7c35 520 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 3.6E-30 T 28-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 DDI_RS10565 59288107193f0dd3d6b0360fe03b7c35 520 SUPERFAMILY SSF54862 1 503 1.47E-178 T 28-03-2018 DDI_RS10565 59288107193f0dd3d6b0360fe03b7c35 520 Gene3D G3DSA:3.30.70.20 198 236 4.5E-19 T 28-03-2018 DDI_RS10565 59288107193f0dd3d6b0360fe03b7c35 520 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 4.7E-297 T 28-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 DDI_RS10565 59288107193f0dd3d6b0360fe03b7c35 520 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.1E-36 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS10565 59288107193f0dd3d6b0360fe03b7c35 520 Gene3D G3DSA:3.30.70.20 237 363 2.8E-29 T 28-03-2018 DDI_RS10565 59288107193f0dd3d6b0360fe03b7c35 520 Gene3D G3DSA:3.30.70.20 364 466 7.6E-30 T 28-03-2018 DDI_RS10565 59288107193f0dd3d6b0360fe03b7c35 520 Gene3D G3DSA:3.30.70.20 5 197 6.6E-29 T 28-03-2018 DDI_RS21345 9a3899b36f044a8899bab49880088084 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 28-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DDI_RS21345 9a3899b36f044a8899bab49880088084 204 Gene3D G3DSA:3.30.230.30 8 134 3.9E-37 T 28-03-2018 IPR001498 Impact, N-terminal DDI_RS21345 9a3899b36f044a8899bab49880088084 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 1.3E-27 T 28-03-2018 IPR001498 Impact, N-terminal DDI_RS21345 9a3899b36f044a8899bab49880088084 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 1.5E-67 T 28-03-2018 IPR015796 Impact family, bacterial/archaeal DDI_RS21345 9a3899b36f044a8899bab49880088084 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 3.7E-12 T 28-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DDI_RS21345 9a3899b36f044a8899bab49880088084 204 SUPERFAMILY SSF54980 137 203 1.28E-12 T 28-03-2018 IPR035647 EF-G domain III/V-like DDI_RS21345 9a3899b36f044a8899bab49880088084 204 Gene3D G3DSA:3.30.70.240 136 199 2.1E-14 T 28-03-2018 DDI_RS21345 9a3899b36f044a8899bab49880088084 204 SUPERFAMILY SSF54211 2 132 4.93E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDI_RS05485 25f0be7e9cce99d5aff7eba0cacf36aa 170 SUPERFAMILY SSF54506 23 164 1.37E-12 T 28-03-2018 DDI_RS05485 25f0be7e9cce99d5aff7eba0cacf36aa 170 Gene3D G3DSA:3.10.310.10 17 168 2.0E-7 T 28-03-2018 DDI_RS18800 8f2d40aedd9b0b692e9680f8facd8eab 464 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DDI_RS18800 8f2d40aedd9b0b692e9680f8facd8eab 464 PIRSF PIRSF006060 1 463 7.5E-63 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS18800 8f2d40aedd9b0b692e9680f8facd8eab 464 Pfam PF00324 Amino acid permease 18 426 1.7E-99 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 DDI_RS11395 ecf7594352c156081409f31e79a99a6e 430 Pfam PF01458 Uncharacterized protein family (UPF0051) 175 397 9.7E-70 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 DDI_RS11395 ecf7594352c156081409f31e79a99a6e 430 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 139 413 2.8E-81 T 28-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 DDI_RS11395 ecf7594352c156081409f31e79a99a6e 430 SUPERFAMILY SSF101960 25 422 1.44E-104 T 28-03-2018 DDI_RS08275 3cef04869f3560e7fdb0302e863e26f9 294 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 74 275 7.3E-56 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 DDI_RS08275 3cef04869f3560e7fdb0302e863e26f9 294 SUPERFAMILY SSF56529 62 275 1.7E-68 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 DDI_RS08275 3cef04869f3560e7fdb0302e863e26f9 294 Gene3D G3DSA:3.90.850.10 40 279 6.7E-69 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 DDI_RS06280 6be90c2ef067dc95eaa17abb76dc3df0 207 Gene3D G3DSA:1.10.10.60 2 60 1.7E-18 T 28-03-2018 DDI_RS06280 6be90c2ef067dc95eaa17abb76dc3df0 207 SUPERFAMILY SSF48498 84 203 5.82E-15 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DDI_RS06280 6be90c2ef067dc95eaa17abb76dc3df0 207 Gene3D G3DSA:1.10.357.10 61 205 1.1E-19 T 28-03-2018 DDI_RS06280 6be90c2ef067dc95eaa17abb76dc3df0 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.6E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS06280 6be90c2ef067dc95eaa17abb76dc3df0 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.6E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS06280 6be90c2ef067dc95eaa17abb76dc3df0 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.3E-18 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS06280 6be90c2ef067dc95eaa17abb76dc3df0 207 SUPERFAMILY SSF46689 4 83 7.98E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS12620 7b0de6084201f199df86f394652c831f 166 SUPERFAMILY SSF53163 1 156 1.75E-46 T 28-03-2018 IPR023430 Peptidase HybD-like domain DDI_RS12620 7b0de6084201f199df86f394652c831f 166 Pfam PF01750 Hydrogenase maturation protease 20 146 4.2E-33 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS12620 7b0de6084201f199df86f394652c831f 166 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 147 1.3E-46 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS12620 7b0de6084201f199df86f394652c831f 166 Gene3D G3DSA:3.40.50.1450 1 161 1.8E-52 T 28-03-2018 IPR023430 Peptidase HybD-like domain DDI_RS12620 7b0de6084201f199df86f394652c831f 166 PRINTS PR00446 Hydrogen uptake protein signature 67 83 4.1E-23 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS12620 7b0de6084201f199df86f394652c831f 166 PRINTS PR00446 Hydrogen uptake protein signature 56 66 4.1E-23 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS12620 7b0de6084201f199df86f394652c831f 166 PRINTS PR00446 Hydrogen uptake protein signature 3 15 4.1E-23 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS12620 7b0de6084201f199df86f394652c831f 166 PRINTS PR00446 Hydrogen uptake protein signature 35 52 4.1E-23 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS12620 7b0de6084201f199df86f394652c831f 166 PRINTS PR00446 Hydrogen uptake protein signature 15 26 4.1E-23 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DDI_RS12620 7b0de6084201f199df86f394652c831f 166 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 152 6.7E-51 T 28-03-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 DDI_RS06020 14b2f91a866067c95420447c815a1873 284 PIRSF PIRSF011468 1 284 1.5E-164 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS06020 14b2f91a866067c95420447c815a1873 284 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 277 6.2E-146 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS17060 46de3b888e4a1b6c4e4b61a0df4b9407 195 SMART SM00852 7 153 1.4E-22 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS17060 46de3b888e4a1b6c4e4b61a0df4b9407 195 SUPERFAMILY SSF53218 4 188 7.07E-47 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS17060 46de3b888e4a1b6c4e4b61a0df4b9407 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 4.1E-28 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS17060 46de3b888e4a1b6c4e4b61a0df4b9407 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 6 145 3.0E-39 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS17060 46de3b888e4a1b6c4e4b61a0df4b9407 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DDI_RS17060 46de3b888e4a1b6c4e4b61a0df4b9407 195 Gene3D G3DSA:3.40.980.10 2 188 6.3E-40 T 28-03-2018 IPR001453 MoaB/Mog domain DDI_RS02095 db07b06be758b79b4f72742dd4bf1d41 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 2.3E-39 T 28-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 DDI_RS02095 db07b06be758b79b4f72742dd4bf1d41 97 Gene3D G3DSA:3.30.110.60 2 97 1.1E-27 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DDI_RS02095 db07b06be758b79b4f72742dd4bf1d41 97 SMART SM01103 3 86 7.9E-41 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DDI_RS02095 db07b06be758b79b4f72742dd4bf1d41 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 2.4E-22 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DDI_RS02095 db07b06be758b79b4f72742dd4bf1d41 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 3.0E-40 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DDI_RS02095 db07b06be758b79b4f72742dd4bf1d41 97 SUPERFAMILY SSF75471 1 95 6.28E-31 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DDI_RS14480 4c7a9c9c75d1759d6071ff72c4287746 114 Gene3D G3DSA:2.60.300.12 8 114 4.6E-39 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS14480 4c7a9c9c75d1759d6071ff72c4287746 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 7.4E-21 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS14480 4c7a9c9c75d1759d6071ff72c4287746 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DDI_RS14480 4c7a9c9c75d1759d6071ff72c4287746 114 SUPERFAMILY SSF89360 8 103 3.73E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDI_RS14480 4c7a9c9c75d1759d6071ff72c4287746 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 114 1.0E-38 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DDI_RS14480 4c7a9c9c75d1759d6071ff72c4287746 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.857 T 28-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 DDI_RS01475 e31ec191bf97d28714115f062ba52333 329 Gene3D G3DSA:3.90.550.10 1 249 1.7E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS01475 e31ec191bf97d28714115f062ba52333 329 SUPERFAMILY SSF53448 2 223 8.73E-38 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS01475 e31ec191bf97d28714115f062ba52333 329 Pfam PF00535 Glycosyl transferase family 2 8 164 2.0E-13 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDI_RS20245 9d0ccf10d2150cd5374548aeb94a1d79 113 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 113 27.605 T 28-03-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE DDI_RS20245 9d0ccf10d2150cd5374548aeb94a1d79 113 Pfam PF00892 EamA-like transporter family 10 109 1.6E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS20245 9d0ccf10d2150cd5374548aeb94a1d79 113 SUPERFAMILY SSF103481 31 109 5.49E-12 T 28-03-2018 DDI_RS04695 86145f5fc43bb6030bd1d5293061d079 208 SUPERFAMILY SSF53271 4 206 1.31E-65 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS04695 86145f5fc43bb6030bd1d5293061d079 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 4.1E-65 T 28-03-2018 DDI_RS04695 86145f5fc43bb6030bd1d5293061d079 208 Gene3D G3DSA:3.40.50.2020 1 206 1.4E-59 T 28-03-2018 DDI_RS04695 86145f5fc43bb6030bd1d5293061d079 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.323 T 28-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DDI_RS04695 86145f5fc43bb6030bd1d5293061d079 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.1E-89 T 28-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DDI_RS05340 c6f52b614f3598c947bc0d915d07cfb4 193 SUPERFAMILY SSF51283 1 193 2.22E-60 T 28-03-2018 IPR029054 dUTPase-like DDI_RS05340 c6f52b614f3598c947bc0d915d07cfb4 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.1E-67 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 DDI_RS05340 c6f52b614f3598c947bc0d915d07cfb4 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 33.875 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 DDI_RS05340 c6f52b614f3598c947bc0d915d07cfb4 193 Pfam PF00692 dUTPase 78 184 9.2E-9 T 28-03-2018 IPR029054 dUTPase-like DDI_RS05340 c6f52b614f3598c947bc0d915d07cfb4 193 Gene3D G3DSA:2.70.40.10 2 168 1.6E-43 T 28-03-2018 DDI_RS14960 46c2403dc77d42494a29e1266220b4f3 102 Gene3D G3DSA:3.30.70.1060 1 86 1.2E-10 T 28-03-2018 DDI_RS14960 46c2403dc77d42494a29e1266220b4f3 102 Pfam PF03795 YCII-related domain 1 77 2.1E-5 T 28-03-2018 IPR005545 YCII-related DDI_RS14960 46c2403dc77d42494a29e1266220b4f3 102 SUPERFAMILY SSF54909 1 75 1.15E-9 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS11305 54f4a545a5b117a235cc4989b521338f 115 Pfam PF01844 HNH endonuclease 27 75 6.6E-12 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 DDI_RS11305 54f4a545a5b117a235cc4989b521338f 115 Gene3D G3DSA:3.40.1800.10 6 86 2.9E-8 T 28-03-2018 DDI_RS11305 54f4a545a5b117a235cc4989b521338f 115 SMART SM00507 15 70 2.1E-6 T 28-03-2018 IPR003615 HNH nuclease DDI_RS12320 cffd50f927fb647ac291d8caca92e9be 377 TIGRFAM TIGR04020 seco_metab_LLM: natural product biosynthesis luciferase-like monooxygenase domain 33 364 1.0E-102 T 28-03-2018 IPR024011 Natural product biosynthesis luciferase-like monooxygenase domain DDI_RS12320 cffd50f927fb647ac291d8caca92e9be 377 Gene3D G3DSA:3.20.20.30 14 374 1.5E-55 T 28-03-2018 DDI_RS12320 cffd50f927fb647ac291d8caca92e9be 377 SUPERFAMILY SSF51679 32 365 1.22E-68 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS12320 cffd50f927fb647ac291d8caca92e9be 377 Pfam PF00296 Luciferase-like monooxygenase 34 339 3.7E-40 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DDI_RS00415 42cfc685d0e83a758e4a457d73bb25cb 262 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 261 4.4E-27 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DDI_RS00415 42cfc685d0e83a758e4a457d73bb25cb 262 PIRSF PIRSF006157 1 262 5.1E-90 T 28-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 DDI_RS00415 42cfc685d0e83a758e4a457d73bb25cb 262 SUPERFAMILY SSF53213 5 261 1.57E-91 T 28-03-2018 DDI_RS00415 42cfc685d0e83a758e4a457d73bb25cb 262 Gene3D G3DSA:3.40.830.10 1 262 1.6E-81 T 28-03-2018 DDI_RS08220 6a2b1bad069db6b21dd5c1782a7fd8f8 245 SUPERFAMILY SSF51366 1 243 5.99E-67 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 DDI_RS08220 6a2b1bad069db6b21dd5c1782a7fd8f8 245 Gene3D G3DSA:3.20.20.70 1 245 9.5E-55 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS08220 6a2b1bad069db6b21dd5c1782a7fd8f8 245 Pfam PF00977 Histidine biosynthesis protein 1 233 1.2E-77 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 DDI_RS08220 6a2b1bad069db6b21dd5c1782a7fd8f8 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.569 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DDI_RS08220 6a2b1bad069db6b21dd5c1782a7fd8f8 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.3E-78 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DDI_RS07785 b59889796db3873e8eb25f43bce47e00 582 TIGRFAM TIGR01686 FkbH: FkbH domain 225 552 3.8E-86 T 28-03-2018 IPR010037 FkbH domain DDI_RS07785 b59889796db3873e8eb25f43bce47e00 582 Gene3D G3DSA:3.40.50.1000 224 391 5.7E-13 T 28-03-2018 IPR023214 HAD-like domain DDI_RS07785 b59889796db3873e8eb25f43bce47e00 582 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 227 349 3.1E-18 T 28-03-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC DDI_RS07785 b59889796db3873e8eb25f43bce47e00 582 Gene3D G3DSA:3.40.630.30 420 557 1.1E-7 T 28-03-2018 DDI_RS07785 b59889796db3873e8eb25f43bce47e00 582 SUPERFAMILY SSF56784 225 347 1.45E-11 T 28-03-2018 IPR023214 HAD-like domain DDI_RS07785 b59889796db3873e8eb25f43bce47e00 582 SUPERFAMILY SSF55729 418 555 4.89E-7 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 4.9E-54 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 4.9E-54 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 4.9E-54 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 4.9E-54 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 4.9E-54 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 4.9E-54 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 4 403 3.9E-100 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 Gene3D G3DSA:3.40.50.1820 1 678 9.4E-84 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 SUPERFAMILY SSF53474 415 655 2.56E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 Pfam PF00326 Prolyl oligopeptidase family 461 678 1.0E-67 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DDI_RS08760 5b18b1c6039f2281397bf79fb8e9bdea 683 SUPERFAMILY SSF50993 1 407 8.37E-86 T 28-03-2018 DDI_RS12755 be6b53463d88447e8f93b0f7ef01e719 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 7.1E-59 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 DDI_RS12755 be6b53463d88447e8f93b0f7ef01e719 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.142 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 DDI_RS09700 ff194c6253f42d611757dd6161111b83 140 Pfam PF05932 Tir chaperone protein (CesT) family 10 127 6.4E-18 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 DDI_RS09700 ff194c6253f42d611757dd6161111b83 140 Gene3D G3DSA:3.30.1460.10 5 129 3.6E-24 T 28-03-2018 DDI_RS09700 ff194c6253f42d611757dd6161111b83 140 SUPERFAMILY SSF69635 6 132 6.8E-12 T 28-03-2018 DDI_RS03615 d14d35f0b17d46e870da9eb12e1acf7d 412 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 6.3E-54 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DDI_RS03615 d14d35f0b17d46e870da9eb12e1acf7d 412 SUPERFAMILY SSF53187 188 284 5.65E-56 T 28-03-2018 DDI_RS03615 d14d35f0b17d46e870da9eb12e1acf7d 412 SUPERFAMILY SSF53187 331 407 5.65E-56 T 28-03-2018 DDI_RS03615 d14d35f0b17d46e870da9eb12e1acf7d 412 Pfam PF11741 AMIN domain 39 142 2.6E-26 T 28-03-2018 IPR021731 AMIN domain DDI_RS03615 d14d35f0b17d46e870da9eb12e1acf7d 412 SMART SM00646 250 404 7.7E-66 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DDI_RS03615 d14d35f0b17d46e870da9eb12e1acf7d 412 Gene3D G3DSA:3.40.630.40 185 412 7.0E-59 T 28-03-2018 DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 Gene3D G3DSA:3.40.50.720 1 242 2.4E-49 T 28-03-2018 DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 SUPERFAMILY SSF51735 1 216 3.74E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.3E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.3E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.3E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.3E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 8.4E-4 T 28-03-2018 DDI_RS01270 4ee6e8a21bfebaed7ba72ae9949a84f9 254 Pfam PF00106 short chain dehydrogenase 6 190 8.7E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19790 b0e74201cb590dffee1002ee4bbf9277 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 7.3E-53 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DDI_RS19790 b0e74201cb590dffee1002ee4bbf9277 145 SUPERFAMILY SSF69500 1 144 3.01E-56 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain DDI_RS19790 b0e74201cb590dffee1002ee4bbf9277 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.2E-69 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DDI_RS19790 b0e74201cb590dffee1002ee4bbf9277 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.159 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DDI_RS19790 b0e74201cb590dffee1002ee4bbf9277 145 Gene3D G3DSA:3.50.80.10 1 145 9.6E-54 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain DDI_RS11730 78dc7a1cc7d7eb83c8a29486c91e13bd 214 Gene3D G3DSA:3.40.50.300 1 213 1.5E-51 T 28-03-2018 DDI_RS11730 78dc7a1cc7d7eb83c8a29486c91e13bd 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 1.7E-63 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DDI_RS11730 78dc7a1cc7d7eb83c8a29486c91e13bd 214 SUPERFAMILY SSF52540 1 210 2.81E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS11730 78dc7a1cc7d7eb83c8a29486c91e13bd 214 Pfam PF02223 Thymidylate kinase 8 198 1.4E-56 T 28-03-2018 DDI_RS11730 78dc7a1cc7d7eb83c8a29486c91e13bd 214 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 28-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DDI_RS11730 78dc7a1cc7d7eb83c8a29486c91e13bd 214 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.23 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DDI_RS13915 8c4043f78955307f25164a73b29a00a3 519 Gene3D G3DSA:1.25.40.10 3 505 1.0E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS00865 a73f4643b6a1ea2ed4581c2b6bc28c06 420 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 35 366 1.0E-34 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS00865 a73f4643b6a1ea2ed4581c2b6bc28c06 420 Gene3D G3DSA:3.40.50.300 3 399 1.9E-20 T 28-03-2018 DDI_RS00865 a73f4643b6a1ea2ed4581c2b6bc28c06 420 PIRSF PIRSF029347 2 392 7.0E-31 T 28-03-2018 IPR014555 RecF-like DDI_RS00865 a73f4643b6a1ea2ed4581c2b6bc28c06 420 SUPERFAMILY SSF52540 1 104 3.64E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS00865 a73f4643b6a1ea2ed4581c2b6bc28c06 420 SUPERFAMILY SSF52540 194 386 3.64E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS01375 d0f9fbc1dbd7bc34d9da25935031604c 437 SUPERFAMILY SSF103473 22 435 2.49E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS01375 d0f9fbc1dbd7bc34d9da25935031604c 437 Gene3D G3DSA:1.20.1250.20 232 437 2.4E-25 T 28-03-2018 DDI_RS01375 d0f9fbc1dbd7bc34d9da25935031604c 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDI_RS01375 d0f9fbc1dbd7bc34d9da25935031604c 437 Pfam PF07690 Major Facilitator Superfamily 63 394 5.6E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS01375 d0f9fbc1dbd7bc34d9da25935031604c 437 Gene3D G3DSA:1.20.1250.20 14 231 3.5E-21 T 28-03-2018 DDI_RS19610 015b83ae21c1f9c2e338c672158a47d8 502 Pfam PF01384 Phosphate transporter family 30 491 4.4E-89 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 DDI_RS18030 29553bbd12332515fe08f1b3898cf3e4 101 SUPERFAMILY SSF57716 2 101 2.64E-37 T 28-03-2018 DDI_RS18030 29553bbd12332515fe08f1b3898cf3e4 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.706 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid DDI_RS18030 29553bbd12332515fe08f1b3898cf3e4 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 28-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18030 29553bbd12332515fe08f1b3898cf3e4 101 Gene3D G3DSA:4.10.830.10 1 101 2.6E-32 T 28-03-2018 DDI_RS18030 29553bbd12332515fe08f1b3898cf3e4 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.6E-26 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS10835 b7f6f2fc8b43fe90b7cb82ecd050595d 289 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 63 2.8E-6 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDI_RS10835 b7f6f2fc8b43fe90b7cb82ecd050595d 289 Gene3D G3DSA:1.10.3720.10 9 276 9.4E-42 T 28-03-2018 DDI_RS10835 b7f6f2fc8b43fe90b7cb82ecd050595d 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 287 1.8E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS10835 b7f6f2fc8b43fe90b7cb82ecd050595d 289 SUPERFAMILY SSF161098 82 268 2.09E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS04305 7ea46ec742717a57fee849335d2cb913 124 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 61 122 8.1E-29 T 28-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DDI_RS04305 7ea46ec742717a57fee849335d2cb913 124 Gene3D G3DSA:1.10.150.310 81 124 8.4E-15 T 28-03-2018 DDI_RS04305 7ea46ec742717a57fee849335d2cb913 124 Pfam PF12836 Helix-hairpin-helix motif 60 123 3.7E-21 T 28-03-2018 DDI_RS04305 7ea46ec742717a57fee849335d2cb913 124 Gene3D G3DSA:1.10.150.20 36 80 7.3E-9 T 28-03-2018 DDI_RS04305 7ea46ec742717a57fee849335d2cb913 124 SUPERFAMILY SSF47781 49 119 1.22E-24 T 28-03-2018 IPR010994 RuvA domain 2-like DDI_RS10185 a305bfad86a02d63e932db64bfd4c9a1 87 Gene3D G3DSA:1.10.1220.10 3 43 1.4E-11 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS10185 a305bfad86a02d63e932db64bfd4c9a1 87 SUPERFAMILY SSF47598 3 45 7.11E-9 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS10185 a305bfad86a02d63e932db64bfd4c9a1 87 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 68 1.8E-26 T 28-03-2018 IPR022789 Antitoxin ParD DDI_RS10185 a305bfad86a02d63e932db64bfd4c9a1 87 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 3 64 3.0E-18 T 28-03-2018 IPR022789 Antitoxin ParD DDI_RS00280 a1afc38776b52f47fc907deace887636 218 Pfam PF05494 MlaC protein 38 204 9.1E-54 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DDI_RS00280 a1afc38776b52f47fc907deace887636 218 Gene3D G3DSA:1.10.10.640 168 213 0.34 T 28-03-2018 DDI_RS00280 a1afc38776b52f47fc907deace887636 218 PIRSF PIRSF004649 1 217 3.0E-59 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DDI_RS00280 a1afc38776b52f47fc907deace887636 218 Gene3D G3DSA:3.10.450.50 79 167 3.8E-19 T 28-03-2018 DDI_RS00280 a1afc38776b52f47fc907deace887636 218 Gene3D G3DSA:3.10.450.50 31 78 1.4E-5 T 28-03-2018 DDI_RS18840 9d345f814c676459aae383286ffc9800 376 Gene3D G3DSA:3.40.50.2000 1 210 1.2E-75 T 28-03-2018 DDI_RS18840 9d345f814c676459aae383286ffc9800 376 Gene3D G3DSA:3.40.50.2000 211 356 1.2E-35 T 28-03-2018 DDI_RS18840 9d345f814c676459aae383286ffc9800 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 1.3E-159 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 DDI_RS18840 9d345f814c676459aae383286ffc9800 376 SUPERFAMILY SSF53756 2 372 3.72E-135 T 28-03-2018 DDI_RS18840 9d345f814c676459aae383286ffc9800 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 7.5E-119 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 DDI_RS18840 9d345f814c676459aae383286ffc9800 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 62.964 T 28-03-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 DDI_RS00915 dba7a3b6fa6d5324546b3ba30de2dccf 73 SUPERFAMILY SSF47598 6 69 2.0E-16 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS00915 dba7a3b6fa6d5324546b3ba30de2dccf 73 Gene3D G3DSA:1.20.5.780 6 72 8.9E-21 T 28-03-2018 DDI_RS00915 dba7a3b6fa6d5324546b3ba30de2dccf 73 Pfam PF08681 Protein of unknown function (DUF1778) 10 69 1.1E-17 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 DDI_RS00375 0f912cd597978b070475f2ebb39b0267 249 Gene3D G3DSA:1.10.3810.10 52 247 1.1E-54 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 DDI_RS00375 0f912cd597978b070475f2ebb39b0267 249 SUPERFAMILY SSF53955 61 241 4.78E-59 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS00375 0f912cd597978b070475f2ebb39b0267 249 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 21 238 5.0E-83 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 DDI_RS00375 0f912cd597978b070475f2ebb39b0267 249 Pfam PF00912 Transglycosylase 68 234 1.9E-48 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 DDI_RS00375 0f912cd597978b070475f2ebb39b0267 249 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 15 240 42.199 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 DDI_RS02625 66cf14b607b076d844d6e8b54d973b60 536 SUPERFAMILY SSF53850 29 534 1.18E-103 T 28-03-2018 DDI_RS02625 66cf14b607b076d844d6e8b54d973b60 536 Gene3D G3DSA:3.40.190.10 160 302 3.4E-29 T 28-03-2018 DDI_RS02625 66cf14b607b076d844d6e8b54d973b60 536 Gene3D G3DSA:3.90.76.10 48 159 1.1E-24 T 28-03-2018 DDI_RS02625 66cf14b607b076d844d6e8b54d973b60 536 PIRSF PIRSF002741 1 535 4.1E-73 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS02625 66cf14b607b076d844d6e8b54d973b60 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 443 3.4E-77 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS02625 66cf14b607b076d844d6e8b54d973b60 536 Gene3D G3DSA:3.10.105.10 303 505 3.9E-38 T 28-03-2018 DDI_RS11225 792791de24450bf24a585132abdc58d9 116 SUPERFAMILY SSF52833 4 103 5.09E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS11225 792791de24450bf24a585132abdc58d9 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 6 102 3.2E-46 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related DDI_RS11225 792791de24450bf24a585132abdc58d9 116 Gene3D G3DSA:3.40.30.10 4 116 2.1E-29 T 28-03-2018 DDI_RS11225 792791de24450bf24a585132abdc58d9 116 Pfam PF00462 Glutaredoxin 18 82 2.4E-18 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DDI_RS11225 792791de24450bf24a585132abdc58d9 116 PIRSF PIRSF005894 1 109 1.5E-51 T 28-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 DDI_RS14700 3028e28e96025526a91ae3c6073a816f 246 Gene3D G3DSA:3.60.140.10 2 246 2.2E-96 T 28-03-2018 DDI_RS14700 3028e28e96025526a91ae3c6073a816f 246 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 23 244 3.7E-78 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase DDI_RS14700 3028e28e96025526a91ae3c6073a816f 246 SUPERFAMILY SSF64438 6 245 5.68E-87 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DDI_RS14700 3028e28e96025526a91ae3c6073a816f 246 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 28 245 3.2E-66 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase DDI_RS00550 d152752bf295c9fa1580a2d0962e8e28 275 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 248 1.9E-25 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS00550 d152752bf295c9fa1580a2d0962e8e28 275 Gene3D G3DSA:3.40.225.10 7 275 3.4E-41 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS00550 d152752bf295c9fa1580a2d0962e8e28 275 SUPERFAMILY SSF53639 7 273 2.16E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS00550 d152752bf295c9fa1580a2d0962e8e28 275 SMART SM01007 15 249 1.3E-18 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal DDI_RS21250 3330db2b807a7eafb23831269b09a706 510 Pfam PF02646 RmuC family 172 467 3.2E-103 T 28-03-2018 IPR003798 DNA recombination RmuC DDI_RS21250 3330db2b807a7eafb23831269b09a706 510 Gene3D G3DSA:1.20.5.340 182 333 7.7E-21 T 28-03-2018 DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 8.5E-45 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 Gene3D G3DSA:3.40.366.10 1 184 9.0E-52 T 28-03-2018 DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.8E-128 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 PIRSF PIRSF000446 1 309 1.1E-136 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 Pfam PF00698 Acyl transferase domain 7 291 7.8E-38 T 28-03-2018 IPR014043 Acyl transferase DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 Gene3D G3DSA:3.40.366.10 185 309 6.5E-32 T 28-03-2018 DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 SUPERFAMILY SSF52151 4 122 1.54E-81 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 SUPERFAMILY SSF52151 190 308 1.54E-81 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 DDI_RS11760 abfa047344becd49cd1af7789a6c5b68 309 SUPERFAMILY SSF55048 128 197 5.89E-18 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 DDI_RS09620 21a9d143fe40bc27be2b13bd78c1c9b4 206 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 204 3.0E-65 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DDI_RS09620 21a9d143fe40bc27be2b13bd78c1c9b4 206 Pfam PF03550 Outer membrane lipoprotein LolB 51 203 4.2E-45 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DDI_RS09620 21a9d143fe40bc27be2b13bd78c1c9b4 206 SUPERFAMILY SSF89392 34 204 4.32E-49 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DDI_RS09620 21a9d143fe40bc27be2b13bd78c1c9b4 206 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 205 27.931 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DDI_RS09620 21a9d143fe40bc27be2b13bd78c1c9b4 206 Gene3D G3DSA:2.50.20.10 30 206 2.5E-49 T 28-03-2018 DDI_RS10980 ae5e89261f7f0fd146061cc5475b90dd 167 SUPERFAMILY SSF52833 4 164 1.1E-42 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS10980 ae5e89261f7f0fd146061cc5475b90dd 167 Pfam PF08534 Redoxin 21 163 8.9E-30 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DDI_RS10980 ae5e89261f7f0fd146061cc5475b90dd 167 Gene3D G3DSA:3.40.30.10 14 167 2.7E-22 T 28-03-2018 DDI_RS10980 ae5e89261f7f0fd146061cc5475b90dd 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 40.036 T 28-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 DDI_RS10980 ae5e89261f7f0fd146061cc5475b90dd 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 28-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 DDI_RS15740 ebb8bee477210ca43e87798d8e46ff45 249 Gene3D G3DSA:3.40.50.1820 1 249 2.8E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS15740 ebb8bee477210ca43e87798d8e46ff45 249 SUPERFAMILY SSF53474 14 248 6.87E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS15740 ebb8bee477210ca43e87798d8e46ff45 249 Pfam PF00326 Prolyl oligopeptidase family 96 234 4.1E-15 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DDI_RS17825 613c7c4e4b785215d998abb656692eeb 484 PIRSF PIRSF002457 1 484 1.9E-148 T 28-03-2018 IPR030676 Citrate carrier CitT-related DDI_RS17825 613c7c4e4b785215d998abb656692eeb 484 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 482 4.9E-132 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDI_RS17825 613c7c4e4b785215d998abb656692eeb 484 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 30 478 2.2E-114 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDI_RS06315 2f9b0077f215f81721fbba6299af2258 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 132 8.6E-29 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 DDI_RS11115 84ade337c729e51b13d669806077e1bb 337 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 1.2E-182 T 28-03-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 DDI_RS11115 84ade337c729e51b13d669806077e1bb 337 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 39.601 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 DDI_RS11115 84ade337c729e51b13d669806077e1bb 337 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 2.8E-113 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 DDI_RS11115 84ade337c729e51b13d669806077e1bb 337 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 314 2.0E-129 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 SUPERFAMILY SSF52313 6 236 3.79E-96 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain DDI_RS03725 7430fb80c424a31aee40d72622059935 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.4E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.4E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.4E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.4E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.4E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.4E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.1E-107 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 Pfam PF00318 Ribosomal protein S2 9 224 6.0E-94 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.554 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 Gene3D G3DSA:3.40.50.10490 5 241 2.1E-96 T 28-03-2018 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DDI_RS03725 7430fb80c424a31aee40d72622059935 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DDI_RS10845 51da8c34f9d36cabc9cd8be5ba354440 225 SUPERFAMILY SSF110857 47 160 3.27E-10 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like DDI_RS10845 51da8c34f9d36cabc9cd8be5ba354440 225 Pfam PF04752 ChaC-like protein 47 215 1.1E-46 T 28-03-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 Reactome: R-HSA-174403 DDI_RS10845 51da8c34f9d36cabc9cd8be5ba354440 225 Gene3D G3DSA:3.10.490.10 32 218 1.5E-37 T 28-03-2018 DDI_RS18900 8bf066eb84451170fbe259a6ab1b2509 499 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 491 6.0E-226 T 28-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 DDI_RS18900 8bf066eb84451170fbe259a6ab1b2509 499 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 438 8.2E-124 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS18900 8bf066eb84451170fbe259a6ab1b2509 499 Pfam PF00474 Sodium:solute symporter family 36 438 1.2E-137 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS18900 8bf066eb84451170fbe259a6ab1b2509 499 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 420 440 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 Gene3D G3DSA:3.30.860.10 1 92 2.8E-40 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-45 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.582 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 PIRSF PIRSF002144 1 92 1.9E-31 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.1E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.1E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.1E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 Pfam PF00203 Ribosomal protein S19 3 83 1.4E-35 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS18075 b02b863f04c4a0a61ad801b1d4cddad8 92 SUPERFAMILY SSF54570 3 84 3.66E-35 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 3.5E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 55 70 3.5E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 3.5E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 703 5.7E-193 T 28-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 Gene3D G3DSA:3.40.50.300 1 306 3.7E-33 T 28-03-2018 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 160 1.9E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 SUPERFAMILY SSF52540 6 170 6.43E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 Pfam PF07670 Nucleoside recognition 356 447 3.7E-12 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 Pfam PF07670 Nucleoside recognition 516 706 5.0E-31 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 Pfam PF07664 Ferrous iron transport protein B C terminus 459 511 1.2E-22 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 DDI_RS10105 67d358d700c3198a21cae2b0c77fbfc1 774 Pfam PF02421 Ferrous iron transport protein B 7 161 5.6E-64 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 1.8E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 1.8E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 1.8E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 1.8E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 1.8E-50 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 SMART SM00304 215 267 2.9E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 Gene3D G3DSA:1.10.287.950 45 320 5.0E-17 T 28-03-2018 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 Gene3D G3DSA:1.10.287.950 321 519 1.8E-46 T 28-03-2018 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 SUPERFAMILY SSF58104 235 516 1.83E-71 T 28-03-2018 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 175 5.7E-18 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 482 7.9E-48 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 Pfam PF00672 HAMP domain 215 258 4.2E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 DDI_RS16330 17c9cb08c8ae6026fdd9839cde5f0df2 562 SMART SM00283 268 515 1.3E-81 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 DDI_RS07620 e17883f7e3c19ff28a50e5252a3d7ab2 260 SUPERFAMILY SSF52172 142 256 4.55E-13 T 28-03-2018 IPR011006 CheY-like superfamily DDI_RS07620 e17883f7e3c19ff28a50e5252a3d7ab2 260 Pfam PF00072 Response regulator receiver domain 144 239 1.4E-6 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDI_RS07620 e17883f7e3c19ff28a50e5252a3d7ab2 260 Gene3D G3DSA:3.40.50.2300 138 258 1.1E-13 T 28-03-2018 DDI_RS17790 3b54d5565c5404b5f665081a5fa05a5e 117 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 111 8.6E-44 T 28-03-2018 IPR007437 Putative member of DMT superfamily DDI_RS17790 3b54d5565c5404b5f665081a5fa05a5e 117 PIRSF PIRSF021239 1 114 1.8E-53 T 28-03-2018 IPR007437 Putative member of DMT superfamily DDI_RS00930 40528207f7b6522cf12f2c54dee215dc 462 Gene3D G3DSA:1.25.40.10 47 417 3.9E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 DDI_RS14060 6e0bef1a5b7c5fd4d623e8b93aa6a292 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.5E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DDI_RS14060 6e0bef1a5b7c5fd4d623e8b93aa6a292 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 3.1E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DDI_RS14060 6e0bef1a5b7c5fd4d623e8b93aa6a292 66 SUPERFAMILY SSF140319 3 64 1.44E-26 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DDI_RS14060 6e0bef1a5b7c5fd4d623e8b93aa6a292 66 PIRSF PIRSF039003 3 66 2.4E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DDI_RS14060 6e0bef1a5b7c5fd4d623e8b93aa6a292 66 Gene3D G3DSA:1.10.10.600 2 64 2.6E-33 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DDI_RS00270 dc3815f64df6d3dd8327e2d76ab095e3 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 1.0E-104 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DDI_RS00270 dc3815f64df6d3dd8327e2d76ab095e3 260 Pfam PF02405 Permease MlaE 46 256 6.1E-76 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 DDI_RS07990 39eb0784cdc41c71af2e61f7550259e8 145 Pfam PF10767 Protein of unknown function (DUF2593) 3 143 3.9E-63 T 28-03-2018 IPR019703 Protein of unknown function DUF2593 DDI_RS07290 bada7c7cf7f68e448a6a22b09ebba1e8 317 Gene3D G3DSA:3.40.710.10 21 315 2.5E-45 T 28-03-2018 DDI_RS07290 bada7c7cf7f68e448a6a22b09ebba1e8 317 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 264 5.7E-79 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DDI_RS07290 bada7c7cf7f68e448a6a22b09ebba1e8 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 2.2E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS07290 bada7c7cf7f68e448a6a22b09ebba1e8 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 2.2E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS07290 bada7c7cf7f68e448a6a22b09ebba1e8 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 2.2E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDI_RS07290 bada7c7cf7f68e448a6a22b09ebba1e8 317 SUPERFAMILY SSF56601 1 280 4.94E-62 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS02955 a86e7f306024f6b882e863a74fb088fe 194 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 6 185 3.0E-60 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 DDI_RS02955 a86e7f306024f6b882e863a74fb088fe 194 Pfam PF00293 NUDIX domain 45 170 5.2E-9 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS02955 a86e7f306024f6b882e863a74fb088fe 194 Gene3D G3DSA:3.90.79.10 1 191 2.0E-33 T 28-03-2018 DDI_RS02955 a86e7f306024f6b882e863a74fb088fe 194 SUPERFAMILY SSF55811 9 188 4.6E-48 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 SUPERFAMILY SSF64518 164 420 6.67E-26 T 28-03-2018 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 582 636 9.5E-9 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 3.6E-42 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 3.6E-42 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 3.6E-42 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 3.6E-42 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 3.6E-42 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 3.6E-42 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 PRINTS PR01005 Flagellar hook-associated protein signature 354 376 3.6E-42 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 370 3.2E-77 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 SUPERFAMILY SSF64518 425 636 1.57E-20 T 28-03-2018 DDI_RS12060 b46820ce6deb49592e0d9da1af968c11 640 Pfam PF00460 Flagella basal body rod protein 5 34 2.2E-7 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DDI_RS01175 bd4f73ea0d4ce58698aae3bf4780de80 180 Pfam PF07274 Protein of unknown function (DUF1440) 22 155 2.1E-56 T 28-03-2018 IPR009898 Protein of unknown function DUF1440 DDI_RS10365 29c41173db53e0eb2eec189feb5896e9 398 SUPERFAMILY SSF101801 320 390 3.79E-14 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS10365 29c41173db53e0eb2eec189feb5896e9 398 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 323 385 4.6E-12 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS10365 29c41173db53e0eb2eec189feb5896e9 398 Gene3D G3DSA:2.30.330.10 158 268 0.023 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS10365 29c41173db53e0eb2eec189feb5896e9 398 Gene3D G3DSA:2.30.330.10 311 387 1.8E-17 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) DDI_RS14120 9489bfe65432bce06b3f1e233b370db8 263 SUPERFAMILY SSF52540 6 231 3.29E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS14120 9489bfe65432bce06b3f1e233b370db8 263 SMART SM00382 31 216 5.4E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS14120 9489bfe65432bce06b3f1e233b370db8 263 Pfam PF00005 ABC transporter 29 166 5.1E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS14120 9489bfe65432bce06b3f1e233b370db8 263 Gene3D G3DSA:3.40.50.300 1 242 4.5E-49 T 28-03-2018 DDI_RS14120 9489bfe65432bce06b3f1e233b370db8 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS02595 6f846436703cf5617adb78502f1ce703 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.1E-33 T 28-03-2018 IPR007436 Protein of unknown function DUF485 DDI_RS06845 ed41b59c45c33158cd634cfed1d1fe29 104 Pfam PF01845 CcdB protein 2 103 8.7E-31 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 DDI_RS06845 ed41b59c45c33158cd634cfed1d1fe29 104 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 11 103 7.0E-24 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 DDI_RS06845 ed41b59c45c33158cd634cfed1d1fe29 104 Gene3D G3DSA:2.30.30.110 2 103 1.4E-20 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor DDI_RS06845 ed41b59c45c33158cd634cfed1d1fe29 104 SUPERFAMILY SSF50118 1 104 5.3E-26 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor DDI_RS05920 0f13fd2a6f84f458ef9fe4981c3e917b 91 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 28-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site DDI_RS05920 0f13fd2a6f84f458ef9fe4981c3e917b 91 Pfam PF01455 HupF/HypC family 1 73 6.6E-28 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS05920 0f13fd2a6f84f458ef9fe4981c3e917b 91 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 64 76 2.0E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS05920 0f13fd2a6f84f458ef9fe4981c3e917b 91 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 46 62 2.0E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS05920 0f13fd2a6f84f458ef9fe4981c3e917b 91 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 2.0E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS05920 0f13fd2a6f84f458ef9fe4981c3e917b 91 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 2.0E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS05920 0f13fd2a6f84f458ef9fe4981c3e917b 91 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 82 5.7E-27 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DDI_RS05920 0f13fd2a6f84f458ef9fe4981c3e917b 91 SUPERFAMILY SSF159127 1 87 4.19E-28 T 28-03-2018 DDI_RS18150 083f22124fa4e5d015cbd3825b3fb34c 240 Pfam PF13309 HTH domain 171 228 3.3E-19 T 28-03-2018 DDI_RS18150 083f22124fa4e5d015cbd3825b3fb34c 240 Gene3D G3DSA:1.10.10.60 185 236 4.4E-6 T 28-03-2018 DDI_RS18150 083f22124fa4e5d015cbd3825b3fb34c 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 3.0E-63 T 28-03-2018 IPR013559 YheO-like DDI_RS18150 083f22124fa4e5d015cbd3825b3fb34c 240 Pfam PF08348 YheO-like PAS domain 29 137 1.2E-36 T 28-03-2018 IPR013559 YheO-like DDI_RS11050 e93362290040d9bb5d80a7c3603c929b 221 Gene3D G3DSA:1.10.287.510 29 152 0.0093 T 28-03-2018 DDI_RS11050 e93362290040d9bb5d80a7c3603c929b 221 Gene3D G3DSA:1.20.5.1070 153 221 4.9E-4 T 28-03-2018 DDI_RS11050 e93362290040d9bb5d80a7c3603c929b 221 Pfam PF04012 PspA/IM30 family 2 216 4.8E-49 T 28-03-2018 IPR007157 PspA/IM30 DDI_RS11050 e93362290040d9bb5d80a7c3603c929b 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 2.9E-93 T 28-03-2018 IPR014319 Phage shock protein, PspA DDI_RS20515 13872e09e51e3e7a0e7ae78066f9569e 418 Pfam PF00155 Aminotransferase class I and II 167 402 2.4E-20 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS20515 13872e09e51e3e7a0e7ae78066f9569e 418 Gene3D G3DSA:3.40.640.10 69 291 3.9E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS20515 13872e09e51e3e7a0e7ae78066f9569e 418 Gene3D G3DSA:3.90.1150.10 292 413 2.5E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS20515 13872e09e51e3e7a0e7ae78066f9569e 418 SUPERFAMILY SSF53383 24 413 3.3E-62 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS03040 f3e59a92bf4c9c9c56e69a370e4aced0 187 Pfam PF01638 HxlR-like helix-turn-helix 20 102 2.6E-21 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type DDI_RS03040 f3e59a92bf4c9c9c56e69a370e4aced0 187 SUPERFAMILY SSF46785 6 143 5.67E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS03040 f3e59a92bf4c9c9c56e69a370e4aced0 187 Gene3D G3DSA:1.10.10.10 1 170 7.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00635 f862588036a6ef5b149d1c7779c8f300 199 Gene3D G3DSA:1.10.3690.10 10 112 5.9E-6 T 28-03-2018 DDI_RS00635 f862588036a6ef5b149d1c7779c8f300 199 Pfam PF16754 Bacterial toxin homologue of phage lysozyme, C-term 35 153 4.1E-6 T 28-03-2018 IPR031922 Bacterial toxin homologue of phage lysozyme, C-terminal DDI_RS06055 e590f9d998283fe32bd9d1d85d296b06 286 Pfam PF00005 ABC transporter 45 211 3.9E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS06055 e590f9d998283fe32bd9d1d85d296b06 286 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 27 279 1.1E-84 T 28-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 DDI_RS06055 e590f9d998283fe32bd9d1d85d296b06 286 SMART SM00382 54 280 4.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS06055 e590f9d998283fe32bd9d1d85d296b06 286 SUPERFAMILY SSF52540 26 272 7.31E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06055 e590f9d998283fe32bd9d1d85d296b06 286 ProSitePatterns PS00211 ABC transporters family signature. 183 197 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS06055 e590f9d998283fe32bd9d1d85d296b06 286 Gene3D G3DSA:3.40.50.300 24 280 1.5E-59 T 28-03-2018 DDI_RS17155 a1679eddc3c46a822f11df0712e74216 242 Pfam PF04402 Protein of unknown function (DUF541) 33 236 2.1E-42 T 28-03-2018 IPR007497 Protein of unknown function DUF541 DDI_RS04795 4f49fc75cbeb0aac9d16993b3a58d544 69 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 68 27.321 T 28-03-2018 IPR024905 Sec-independent protein translocase protein TatE DDI_RS04795 4f49fc75cbeb0aac9d16993b3a58d544 69 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 9.3E-19 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DDI_RS04795 4f49fc75cbeb0aac9d16993b3a58d544 69 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 19.869 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DDI_RS04795 4f49fc75cbeb0aac9d16993b3a58d544 69 Pfam PF02416 mttA/Hcf106 family 4 56 1.8E-11 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DDI_RS00570 2b8e5bb8bc3792caa13d28d8843a4947 538 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 128 534 0.0 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS00570 2b8e5bb8bc3792caa13d28d8843a4947 538 SUPERFAMILY SSF57997 27 110 1.31E-6 T 28-03-2018 DDI_RS00570 2b8e5bb8bc3792caa13d28d8843a4947 538 Gene3D G3DSA:2.40.170.10 121 538 3.0E-114 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS00570 2b8e5bb8bc3792caa13d28d8843a4947 538 Pfam PF02264 LamB porin 124 538 1.0E-101 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS00570 2b8e5bb8bc3792caa13d28d8843a4947 538 Pfam PF11471 Maltoporin periplasmic N-terminal extension 2 54 9.7E-17 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain DDI_RS00570 2b8e5bb8bc3792caa13d28d8843a4947 538 Gene3D G3DSA:1.20.1270.70 25 74 1.5E-4 T 28-03-2018 DDI_RS00570 2b8e5bb8bc3792caa13d28d8843a4947 538 Gene3D G3DSA:1.20.1270.70 75 120 0.25 T 28-03-2018 DDI_RS00570 2b8e5bb8bc3792caa13d28d8843a4947 538 SUPERFAMILY SSF56935 121 538 3.11E-126 T 28-03-2018 DDI_RS06575 e2ca4deeff3214f69edc46591d8319c4 469 PIRSF PIRSF006603 14 467 7.9E-75 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS06575 e2ca4deeff3214f69edc46591d8319c4 469 Pfam PF01554 MatE 39 199 5.9E-22 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS06575 e2ca4deeff3214f69edc46591d8319c4 469 Pfam PF01554 MatE 272 422 1.5E-19 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS06575 e2ca4deeff3214f69edc46591d8319c4 469 TIGRFAM TIGR00797 matE: MATE efflux family protein 39 427 1.2E-50 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS17265 d299b79e057fcdca26646cbfbef309e0 421 TIGRFAM TIGR01933 hflK: HflK protein 93 352 4.2E-121 T 28-03-2018 IPR010201 HflK GO:0016021 DDI_RS17265 d299b79e057fcdca26646cbfbef309e0 421 PRINTS PR00721 Stomatin signature 145 166 2.8E-6 T 28-03-2018 IPR001972 Stomatin family GO:0016020 DDI_RS17265 d299b79e057fcdca26646cbfbef309e0 421 PRINTS PR00721 Stomatin signature 98 120 2.8E-6 T 28-03-2018 IPR001972 Stomatin family GO:0016020 DDI_RS17265 d299b79e057fcdca26646cbfbef309e0 421 PRINTS PR00721 Stomatin signature 180 197 2.8E-6 T 28-03-2018 IPR001972 Stomatin family GO:0016020 DDI_RS17265 d299b79e057fcdca26646cbfbef309e0 421 SMART SM00244 91 251 6.4E-41 T 28-03-2018 IPR001107 Band 7 domain DDI_RS17265 d299b79e057fcdca26646cbfbef309e0 421 SUPERFAMILY SSF117892 124 255 6.28E-20 T 28-03-2018 IPR001107 Band 7 domain DDI_RS17265 d299b79e057fcdca26646cbfbef309e0 421 Pfam PF01145 SPFH domain / Band 7 family 95 267 1.7E-30 T 28-03-2018 IPR001107 Band 7 domain DDI_RS17265 d299b79e057fcdca26646cbfbef309e0 421 Pfam PF12221 Bacterial membrane protein N terminal 1 57 2.9E-14 T 28-03-2018 IPR020980 Menbrane protein HflK, N-terminal DDI_RS13060 31eb4016451712318f08621a7d354ae0 72 SUPERFAMILY SSF160582 6 70 7.06E-29 T 28-03-2018 DDI_RS13060 31eb4016451712318f08621a7d354ae0 72 Gene3D G3DSA:3.90.820.10 6 72 5.0E-33 T 28-03-2018 DDI_RS13060 31eb4016451712318f08621a7d354ae0 72 SMART SM00923 7 57 9.4E-27 T 28-03-2018 IPR005153 MbtH-like protein DDI_RS13060 31eb4016451712318f08621a7d354ae0 72 Pfam PF03621 MbtH-like protein 7 56 1.1E-25 T 28-03-2018 IPR005153 MbtH-like protein DDI_RS09390 af88e0dea979ada256c28b745ffa4552 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 622 30.876 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup DDI_RS09390 af88e0dea979ada256c28b745ffa4552 622 Pfam PF02705 K+ potassium transporter 15 543 4.2E-199 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 SUPERFAMILY SSF56784 7 220 2.76E-59 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 Gene3D G3DSA:1.10.150.240 22 81 7.0E-21 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 221 2.1E-79 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 187 3.6E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 35.267 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 192 4.0E-37 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 Gene3D G3DSA:3.40.50.1000 82 230 1.1E-36 T 28-03-2018 IPR023214 HAD-like domain DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 2.9E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 2.9E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 2.9E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 2.9E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS18355 a5b97454304d36d72d3c92dd94a8ec44 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 193 2.0E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 DDI_RS11000 c001e45198aac3e191b8ab35b48ab324 182 Pfam PF13302 Acetyltransferase (GNAT) domain 8 150 2.8E-26 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS11000 c001e45198aac3e191b8ab35b48ab324 182 SUPERFAMILY SSF55729 1 175 5.82E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS11000 c001e45198aac3e191b8ab35b48ab324 182 Gene3D G3DSA:3.40.630.30 3 182 5.3E-24 T 28-03-2018 DDI_RS10825 034ee8398f5be85e2175bcba254bc14e 227 SUPERFAMILY SSF52540 19 224 2.82E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS10825 034ee8398f5be85e2175bcba254bc14e 227 Gene3D G3DSA:3.40.50.300 4 227 5.7E-52 T 28-03-2018 DDI_RS10825 034ee8398f5be85e2175bcba254bc14e 227 Pfam PF00005 ABC transporter 27 174 8.9E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS10825 034ee8398f5be85e2175bcba254bc14e 227 SMART SM00382 35 223 1.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS17600 f8093d4ca173259766ffa39175fddc48 220 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 103 187 1.1E-15 T 28-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis DDI_RS17600 f8093d4ca173259766ffa39175fddc48 220 SUPERFAMILY SSF53146 92 208 4.19E-29 T 28-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis DDI_RS17600 f8093d4ca173259766ffa39175fddc48 220 Gene3D G3DSA:3.30.420.130 91 209 8.9E-24 T 28-03-2018 DDI_RS05005 37160609bd5378a2ce1f917d7164a5ef 256 Gene3D G3DSA:3.40.50.1820 1 255 5.9E-54 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05005 37160609bd5378a2ce1f917d7164a5ef 256 SUPERFAMILY SSF53474 3 253 2.01E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05005 37160609bd5378a2ce1f917d7164a5ef 256 Pfam PF12697 Alpha/beta hydrolase family 19 247 1.7E-21 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 DDI_RS08900 7282e39a01f9179062a3774a675b2123 247 Gene3D G3DSA:2.40.160.20 7 247 2.7E-9 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS08900 7282e39a01f9179062a3774a675b2123 247 Pfam PF06629 MltA-interacting protein MipA 27 247 4.1E-52 T 28-03-2018 IPR010583 MltA-interacting MipA DDI_RS19625 826271e453409f098ffbbb838a26a589 210 Gene3D G3DSA:3.40.1800.10 27 105 7.2E-5 T 28-03-2018 DDI_RS12945 5156885c9e466774c56b550513fe1cad 276 Gene3D G3DSA:3.30.1380.10 20 274 6.8E-96 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDI_RS12945 5156885c9e466774c56b550513fe1cad 276 SUPERFAMILY SSF55166 21 272 2.75E-97 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDI_RS12945 5156885c9e466774c56b550513fe1cad 276 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 64.544 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 DDI_RS12945 5156885c9e466774c56b550513fe1cad 276 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 2.8E-94 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 DDI_RS12945 5156885c9e466774c56b550513fe1cad 276 PIRSF PIRSF018455 3 276 5.3E-115 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 DDI_RS03440 bb1e55738c26ad46d98fe2b4fb0d9d85 355 Gene3D G3DSA:3.40.220.10 1 349 2.4E-36 T 28-03-2018 DDI_RS03440 bb1e55738c26ad46d98fe2b4fb0d9d85 355 SMART SM00506 1 132 1.7E-16 T 28-03-2018 IPR002589 Macro domain DDI_RS03440 bb1e55738c26ad46d98fe2b4fb0d9d85 355 SUPERFAMILY SSF52949 1 148 3.03E-45 T 28-03-2018 DDI_RS03440 bb1e55738c26ad46d98fe2b4fb0d9d85 355 Pfam PF01661 Macro domain 18 129 1.2E-19 T 28-03-2018 IPR002589 Macro domain DDI_RS19695 6d4768df016b1a9f961ad1c36919f6d0 283 SUPERFAMILY SSF161098 46 267 2.88E-60 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19695 6d4768df016b1a9f961ad1c36919f6d0 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 280 9.4E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19695 6d4768df016b1a9f961ad1c36919f6d0 283 Gene3D G3DSA:1.20.58.370 1 34 3.0E-4 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain DDI_RS19695 6d4768df016b1a9f961ad1c36919f6d0 283 Gene3D G3DSA:1.10.3720.10 53 282 2.0E-43 T 28-03-2018 DDI_RS07390 5bff4f4bd3e8827f576c1461221ad1ff 164 SUPERFAMILY SSF46785 10 161 4.68E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS07390 5bff4f4bd3e8827f576c1461221ad1ff 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 3.4E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS07390 5bff4f4bd3e8827f576c1461221ad1ff 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 3.4E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS07390 5bff4f4bd3e8827f576c1461221ad1ff 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 3.4E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS07390 5bff4f4bd3e8827f576c1461221ad1ff 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 3.4E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS07390 5bff4f4bd3e8827f576c1461221ad1ff 164 SMART SM00347 44 147 1.9E-25 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS07390 5bff4f4bd3e8827f576c1461221ad1ff 164 Gene3D G3DSA:1.10.10.10 1 163 6.0E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS07390 5bff4f4bd3e8827f576c1461221ad1ff 164 Pfam PF01047 MarR family 53 110 1.8E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDI_RS05880 fbaab4cfd9d7bca37dd5309a9c0e0332 189 Gene3D G3DSA:3.30.70.20 73 88 1.4E-7 T 28-03-2018 DDI_RS05880 fbaab4cfd9d7bca37dd5309a9c0e0332 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDI_RS05880 fbaab4cfd9d7bca37dd5309a9c0e0332 189 SUPERFAMILY SSF54862 18 118 4.6E-23 T 28-03-2018 DDI_RS05880 fbaab4cfd9d7bca37dd5309a9c0e0332 189 Gene3D G3DSA:1.10.1060.10 23 72 1.8E-10 T 28-03-2018 DDI_RS05880 fbaab4cfd9d7bca37dd5309a9c0e0332 189 Pfam PF12838 4Fe-4S dicluster domain 39 89 8.9E-13 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDI_RS05880 fbaab4cfd9d7bca37dd5309a9c0e0332 189 Gene3D G3DSA:3.30.70.20 89 169 3.5E-4 T 28-03-2018 DDI_RS00500 4b556c388c720b9244345fa1a6d32bb7 219 Pfam PF09335 SNARE associated Golgi protein 48 173 5.8E-20 T 28-03-2018 IPR032816 SNARE associated Golgi protein DDI_RS17645 ed37023cab3e457bfb8f597a8581c0f5 304 Gene3D G3DSA:3.90.1340.10 26 99 3.5E-16 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS17645 ed37023cab3e457bfb8f597a8581c0f5 304 SUPERFAMILY SSF88874 36 170 1.57E-22 T 28-03-2018 DDI_RS17645 ed37023cab3e457bfb8f597a8581c0f5 304 Pfam PF07484 Phage Tail Collar Domain 39 94 3.9E-19 T 28-03-2018 IPR011083 Phage tail collar domain DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 Pfam PF00467 KOW motif 130 162 5.5E-8 T 28-03-2018 IPR005824 KOW DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 Pfam PF02357 Transcription termination factor nusG 7 112 2.7E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 SMART SM00738 6 115 1.0E-49 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.3E-71 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.805 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 SUPERFAMILY SSF82679 6 116 2.09E-40 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 Gene3D G3DSA:3.30.70.940 6 119 5.0E-42 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 SMART SM00739 127 154 7.9E-7 T 28-03-2018 IPR005824 KOW DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 Gene3D G3DSA:2.30.30.30 122 180 6.5E-22 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 DDI_RS21430 b5a5e3efe0cc5404d720283e983f7f68 181 SUPERFAMILY SSF50104 125 180 6.02E-20 T 28-03-2018 IPR008991 Translation protein SH3-like domain DDI_RS08530 a507c593526a428067fbcaa14d7699ae 48 SUPERFAMILY SSF54909 13 47 1.77E-6 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS08530 a507c593526a428067fbcaa14d7699ae 48 Pfam PF07045 Domain of unknown function (DUF1330) 13 47 9.2E-8 T 28-03-2018 IPR010753 Domain of unknown function DUF1330 DDI_RS08530 a507c593526a428067fbcaa14d7699ae 48 Gene3D G3DSA:3.30.70.100 8 48 6.7E-8 T 28-03-2018 DDI_RS06955 135e8611c6e0092ae94d6397ef1c08c4 728 Gene3D G3DSA:3.40.50.300 1 577 1.7E-22 T 28-03-2018 DDI_RS06955 135e8611c6e0092ae94d6397ef1c08c4 728 SUPERFAMILY SSF52540 407 573 6.47E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06955 135e8611c6e0092ae94d6397ef1c08c4 728 SUPERFAMILY SSF52540 4 139 6.47E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS06955 135e8611c6e0092ae94d6397ef1c08c4 728 Pfam PF13166 AAA domain 27 711 2.1E-108 T 28-03-2018 IPR026866 Protein CR006, P-loop domain DDI_RS21175 7471278525d882a9303af32bed4659cc 156 Gene3D G3DSA:3.10.420.10 1 153 2.2E-53 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS21175 7471278525d882a9303af32bed4659cc 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 3.1E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS21175 7471278525d882a9303af32bed4659cc 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 3.1E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS21175 7471278525d882a9303af32bed4659cc 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 3.1E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS21175 7471278525d882a9303af32bed4659cc 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 3.1E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS21175 7471278525d882a9303af32bed4659cc 156 Pfam PF02556 Preprotein translocase subunit SecB 6 144 1.0E-56 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS21175 7471278525d882a9303af32bed4659cc 156 SUPERFAMILY SSF54611 10 141 1.42E-52 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS21175 7471278525d882a9303af32bed4659cc 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.298 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS21175 7471278525d882a9303af32bed4659cc 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 143 5.1E-67 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDI_RS03755 a7d2b1607946e5b51f3c81e52e05e30f 285 Pfam PF01148 Cytidylyltransferase family 4 279 2.3E-71 T 28-03-2018 DDI_RS03755 a7d2b1607946e5b51f3c81e52e05e30f 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 DDI_RS20880 9fba751bd46f5599e76c6bf7f83f4683 347 Pfam PF04245 37-kD nucleoid-associated bacterial protein 24 310 3.8E-18 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DDI_RS20315 e88da6bf78cb1b8e32b4461d5e1e54e0 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 67 9.0E-18 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor DDI_RS20315 e88da6bf78cb1b8e32b4461d5e1e54e0 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 83 5.0E-33 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor DDI_RS20315 e88da6bf78cb1b8e32b4461d5e1e54e0 85 Pfam PF01809 Haemolytic domain 10 75 6.2E-30 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor DDI_RS20315 e88da6bf78cb1b8e32b4461d5e1e54e0 85 SMART SM01234 8 75 1.7E-44 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor DDI_RS20315 e88da6bf78cb1b8e32b4461d5e1e54e0 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.802 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor DDI_RS01350 b98324c425c459c343e834aa31b1b604 384 Pfam PF01494 FAD binding domain 2 337 7.2E-29 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 DDI_RS01350 b98324c425c459c343e834aa31b1b604 384 Gene3D G3DSA:3.50.50.60 1 372 1.3E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01350 b98324c425c459c343e834aa31b1b604 384 SUPERFAMILY SSF51905 2 167 2.46E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01350 b98324c425c459c343e834aa31b1b604 384 SUPERFAMILY SSF51905 264 353 2.46E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDI_RS01350 b98324c425c459c343e834aa31b1b604 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 2.6E-18 T 28-03-2018 DDI_RS01350 b98324c425c459c343e834aa31b1b604 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 2.6E-18 T 28-03-2018 DDI_RS01350 b98324c425c459c343e834aa31b1b604 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 2.6E-18 T 28-03-2018 DDI_RS01350 b98324c425c459c343e834aa31b1b604 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 2.6E-18 T 28-03-2018 DDI_RS04455 435bbb76e771f730aa4182894742b24a 561 Pfam PF00999 Sodium/hydrogen exchanger family 14 385 2.7E-75 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DDI_RS04455 435bbb76e771f730aa4182894742b24a 561 Gene3D G3DSA:1.20.91.10 240 321 1.3E-5 T 28-03-2018 DDI_RS04455 435bbb76e771f730aa4182894742b24a 561 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 295 4.3E-75 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 DDI_RS04455 435bbb76e771f730aa4182894742b24a 561 Pfam PF02254 TrkA-N domain 422 535 2.5E-23 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DDI_RS04455 435bbb76e771f730aa4182894742b24a 561 SUPERFAMILY SSF51735 419 548 2.19E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS04455 435bbb76e771f730aa4182894742b24a 561 Gene3D G3DSA:3.40.50.720 416 550 2.9E-18 T 28-03-2018 DDI_RS16855 96a922f4ab9e417d65094b55bb2d4e99 536 Gene3D G3DSA:1.10.3720.10 322 530 9.7E-21 T 28-03-2018 DDI_RS16855 96a922f4ab9e417d65094b55bb2d4e99 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 262 9.2E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS16855 96a922f4ab9e417d65094b55bb2d4e99 536 SUPERFAMILY SSF161098 12 265 1.68E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS16855 96a922f4ab9e417d65094b55bb2d4e99 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 2.7E-242 T 28-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 DDI_RS16855 96a922f4ab9e417d65094b55bb2d4e99 536 Gene3D G3DSA:1.10.3720.10 8 273 1.6E-28 T 28-03-2018 DDI_RS16855 96a922f4ab9e417d65094b55bb2d4e99 536 SUPERFAMILY SSF161098 288 528 1.7E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01850 81488cc21091e759453407e4e120489e 231 Gene3D G3DSA:3.40.50.150 1 185 4.2E-21 T 28-03-2018 DDI_RS01850 81488cc21091e759453407e4e120489e 231 SUPERFAMILY SSF53335 2 177 1.48E-18 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS01850 81488cc21091e759453407e4e120489e 231 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 97 103 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDI_RS20720 c4b2681140c245e5cc8f5330d8082060 96 Gene3D G3DSA:1.10.1200.10 4 91 5.5E-11 T 28-03-2018 DDI_RS20720 c4b2681140c245e5cc8f5330d8082060 96 Pfam PF00550 Phosphopantetheine attachment site 16 84 3.8E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS20720 c4b2681140c245e5cc8f5330d8082060 96 SUPERFAMILY SSF47336 8 88 3.01E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS06100 67fc1759af66b4be1a8e082ff6474dca 220 PIRSF PIRSF029950 1 220 8.5E-85 T 28-03-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 DDI_RS06100 67fc1759af66b4be1a8e082ff6474dca 220 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 210 3.9E-33 T 28-03-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 DDI_RS06100 67fc1759af66b4be1a8e082ff6474dca 220 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 5 219 2.5E-61 T 28-03-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 DDI_RS06100 67fc1759af66b4be1a8e082ff6474dca 220 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 44 1.6E-13 T 28-03-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal DDI_RS15215 e8f6984318c9e0b513abfd32ac121ad8 126 Gene3D G3DSA:3.10.450.50 3 126 5.3E-24 T 28-03-2018 DDI_RS15215 e8f6984318c9e0b513abfd32ac121ad8 126 Pfam PF11533 Protein of unknown function (DUF3225) 4 125 2.0E-62 T 28-03-2018 IPR024507 Protein of unknown function DUF3225 DDI_RS15215 e8f6984318c9e0b513abfd32ac121ad8 126 SUPERFAMILY SSF54427 4 125 2.29E-42 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS05780 92366877c746a1a59fe6f8e9dcffdfb9 104 SUPERFAMILY SSF47413 9 79 4.5E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS05780 92366877c746a1a59fe6f8e9dcffdfb9 104 SMART SM00530 14 73 1.1E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS05780 92366877c746a1a59fe6f8e9dcffdfb9 104 Pfam PF13560 Helix-turn-helix domain 11 71 5.4E-7 T 28-03-2018 DDI_RS05780 92366877c746a1a59fe6f8e9dcffdfb9 104 Gene3D G3DSA:1.10.260.40 7 94 2.6E-12 T 28-03-2018 DDI_RS20785 c96a7b6e10697715fdd45a12ef312817 383 Gene3D G3DSA:1.20.140.10 215 372 3.5E-9 T 28-03-2018 DDI_RS20785 c96a7b6e10697715fdd45a12ef312817 383 SUPERFAMILY SSF56645 55 223 5.24E-23 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 DDI_RS20785 c96a7b6e10697715fdd45a12ef312817 383 Gene3D G3DSA:2.40.110.10 122 214 7.3E-14 T 28-03-2018 DDI_RS20785 c96a7b6e10697715fdd45a12ef312817 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 212 3.0E-12 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DDI_RS20785 c96a7b6e10697715fdd45a12ef312817 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 367 8.1E-9 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DDI_RS20785 c96a7b6e10697715fdd45a12ef312817 383 SUPERFAMILY SSF47203 229 372 3.24E-10 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DDI_RS18110 57397bb34d1ff79a8a554f03fa56be3a 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 2.8E-13 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DDI_RS17685 f4933d742d0b8f7adff22b7054ea5489 224 SUPERFAMILY SSF50447 4 73 3.11E-9 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain DDI_RS17685 f4933d742d0b8f7adff22b7054ea5489 224 Gene3D G3DSA:3.30.980.10 90 144 9.8E-5 T 28-03-2018 DDI_RS17685 f4933d742d0b8f7adff22b7054ea5489 224 Gene3D G3DSA:3.30.980.10 149 224 1.7E-4 T 28-03-2018 DDI_RS17685 f4933d742d0b8f7adff22b7054ea5489 224 SUPERFAMILY SSF55186 92 214 5.23E-18 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 DDI_RS05170 463c27774369d168bff5f7816ae4206a 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 140 3.2E-24 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 DDI_RS05170 463c27774369d168bff5f7816ae4206a 141 TIGRFAM TIGR02801 tolR: protein TolR 12 139 2.8E-39 T 28-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 DDI_RS09460 aaef5d3a0d9f182764d57298e21a2e94 518 Gene3D G3DSA:3.10.450.50 376 517 1.2E-14 T 28-03-2018 DDI_RS09460 aaef5d3a0d9f182764d57298e21a2e94 518 Pfam PF12902 Ferritin-like 41 250 1.7E-50 T 28-03-2018 DDI_RS09460 aaef5d3a0d9f182764d57298e21a2e94 518 SUPERFAMILY SSF47240 36 101 5.69E-6 T 28-03-2018 IPR009078 Ferritin-like superfamily DDI_RS09460 aaef5d3a0d9f182764d57298e21a2e94 518 Gene3D G3DSA:1.20.1260.10 35 174 6.7E-7 T 28-03-2018 IPR012347 Ferritin-related DDI_RS09460 aaef5d3a0d9f182764d57298e21a2e94 518 SUPERFAMILY SSF54427 377 505 8.25E-19 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS04690 c3378ba82a24ec4374f7ab9fca670e31 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 8.9E-152 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS04690 c3378ba82a24ec4374f7ab9fca670e31 345 Gene3D G3DSA:3.30.1330.10 32 161 9.4E-54 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS04690 c3378ba82a24ec4374f7ab9fca670e31 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 164 2.8E-16 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS04690 c3378ba82a24ec4374f7ab9fca670e31 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.437 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDI_RS04690 c3378ba82a24ec4374f7ab9fca670e31 345 SUPERFAMILY SSF55326 7 170 2.99E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain DDI_RS04690 c3378ba82a24ec4374f7ab9fca670e31 345 Gene3D G3DSA:3.90.650.10 171 345 2.5E-63 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS04690 c3378ba82a24ec4374f7ab9fca670e31 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 342 6.5E-38 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS04690 c3378ba82a24ec4374f7ab9fca670e31 345 SUPERFAMILY SSF56042 171 343 4.64E-64 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain DDI_RS17385 d378622699c181d7cf716ead32480058 147 Gene3D G3DSA:2.40.50.100 42 138 1.8E-6 T 28-03-2018 DDI_RS17385 d378622699c181d7cf716ead32480058 147 SUPERFAMILY SSF51230 63 136 2.99E-9 T 28-03-2018 IPR011053 Single hybrid motif DDI_RS03820 b5623de786f0f06dfd5932f795a10e10 86 Gene3D G3DSA:2.30.30.400 10 83 7.3E-24 T 28-03-2018 DDI_RS03820 b5623de786f0f06dfd5932f795a10e10 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 6.4E-25 T 28-03-2018 IPR009778 Modulator of Rho-dependent transcription termination DDI_RS03820 b5623de786f0f06dfd5932f795a10e10 86 SUPERFAMILY SSF101744 1 85 4.39E-27 T 28-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 6.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 6.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 Pfam PF00106 short chain dehydrogenase 6 192 8.6E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 SUPERFAMILY SSF51735 1 258 2.22E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS19720 104979cb64745b4374aa98c8348a8ae8 264 Gene3D G3DSA:3.40.50.720 1 260 1.1E-46 T 28-03-2018 DDI_RS20365 d9a2469ca85d4ed3499a7e9048a50610 94 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 3.5E-44 T 28-03-2018 IPR022574 Protein of unknown function DUF2623 DDI_RS20365 d9a2469ca85d4ed3499a7e9048a50610 94 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 90 4.0E-20 T 28-03-2018 IPR022574 Protein of unknown function DUF2623 DDI_RS07915 b1e3bae843ad42fe9e4c457348d4ec3d 220 Gene3D G3DSA:1.10.3720.10 2 216 9.8E-35 T 28-03-2018 DDI_RS07915 b1e3bae843ad42fe9e4c457348d4ec3d 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 218 1.4E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07915 b1e3bae843ad42fe9e4c457348d4ec3d 220 SUPERFAMILY SSF161098 8 200 2.35E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00440 fd40d1f2f0f581a52478e417a74587ea 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 1.1E-38 T 28-03-2018 IPR009659 Protein of unknown function DUF1249 DDI_RS08655 57685d8b4cd99e501ee99a06fbb2c82b 270 SUPERFAMILY SSF117396 2 250 2.35E-62 T 28-03-2018 IPR002763 Protein of unknown function DUF72 DDI_RS08655 57685d8b4cd99e501ee99a06fbb2c82b 270 Pfam PF01904 Protein of unknown function DUF72 20 246 1.3E-48 T 28-03-2018 IPR002763 Protein of unknown function DUF72 DDI_RS08655 57685d8b4cd99e501ee99a06fbb2c82b 270 Gene3D G3DSA:3.20.20.410 1 254 2.6E-57 T 28-03-2018 IPR002763 Protein of unknown function DUF72 DDI_RS20055 6b09ff5d79631ab4d63e0aa954a2427c 261 SMART SM00563 96 206 1.1E-13 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS20055 6b09ff5d79631ab4d63e0aa954a2427c 261 Pfam PF01553 Acyltransferase 83 193 1.0E-13 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 DDI_RS20055 6b09ff5d79631ab4d63e0aa954a2427c 261 Gene3D G3DSA:3.40.1130.10 51 260 3.8E-21 T 28-03-2018 DDI_RS20055 6b09ff5d79631ab4d63e0aa954a2427c 261 SUPERFAMILY SSF69593 61 238 4.05E-19 T 28-03-2018 DDI_RS18290 ce5c1bc2d070b83ce791593babed54de 84 Gene3D G3DSA:1.10.260.40 1 83 8.8E-6 T 28-03-2018 DDI_RS07550 bab1a691eec5486acff7ea83908c2a00 81 SUPERFAMILY SSF47598 2 42 2.22E-9 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS07550 bab1a691eec5486acff7ea83908c2a00 81 Gene3D G3DSA:1.10.1220.10 1 53 8.9E-10 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS05045 6ad6b0a43c8178e9036e629c0fda5f2d 561 PIRSF PIRSF001294 1 559 2.3E-233 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 DDI_RS05045 6ad6b0a43c8178e9036e629c0fda5f2d 561 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 557 34.706 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 DDI_RS05045 6ad6b0a43c8178e9036e629c0fda5f2d 561 Pfam PF03814 Potassium-transporting ATPase A subunit 12 555 7.8E-240 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 DDI_RS05045 6ad6b0a43c8178e9036e629c0fda5f2d 561 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 556 3.0E-247 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 DDI_RS15905 931155cc06215a69d8c7d84b1742ec91 108 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 2.9E-30 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DDI_RS15905 931155cc06215a69d8c7d84b1742ec91 108 PIRSF PIRSF000699 1 106 3.5E-31 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DDI_RS15905 931155cc06215a69d8c7d84b1742ec91 108 Gene3D G3DSA:1.20.58.80 3 101 1.5E-31 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DDI_RS15905 931155cc06215a69d8c7d84b1742ec91 108 SUPERFAMILY SSF46973 1 100 2.35E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DDI_RS17005 08f12fc4f51bca54c54b470b335923d2 157 Gene3D G3DSA:3.10.50.40 2 155 9.3E-21 T 28-03-2018 DDI_RS17005 08f12fc4f51bca54c54b470b335923d2 157 SUPERFAMILY SSF54534 5 144 6.87E-35 T 28-03-2018 DDI_RS17005 08f12fc4f51bca54c54b470b335923d2 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 5.3E-13 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDI_RS06820 701473c71946e742ec6b5f7f84a2f5f7 1344 Gene3D G3DSA:3.40.50.300 27 769 6.8E-5 T 28-03-2018 DDI_RS06820 701473c71946e742ec6b5f7f84a2f5f7 1344 SUPERFAMILY SSF52540 28 150 4.34E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS18725 d7f8c221cb542ad1f7bdc823cfdaece1 375 Gene3D G3DSA:3.90.20.10 34 139 1.7E-4 T 28-03-2018 DDI_RS18725 d7f8c221cb542ad1f7bdc823cfdaece1 375 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 35 363 3.0E-130 T 28-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX DDI_RS10115 b7a50093257082b83850a96d23535765 79 Gene3D G3DSA:2.30.30.90 5 79 3.5E-15 T 28-03-2018 DDI_RS10115 b7a50093257082b83850a96d23535765 79 SMART SM00899 6 77 2.9E-11 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DDI_RS10115 b7a50093257082b83850a96d23535765 79 Pfam PF04023 FeoA domain 7 76 5.0E-16 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DDI_RS10115 b7a50093257082b83850a96d23535765 79 SUPERFAMILY SSF50037 8 77 1.97E-11 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal DDI_RS01360 1d0b180ec74c65e4091c027678aec9b5 230 Pfam PF11010 Protein of unknown function (DUF2848) 26 221 1.2E-83 T 28-03-2018 IPR021269 Protein of unknown function DUF2848 DDI_RS07045 9f386a6a85be8e0e0a0ad8fb74b85eef 103 Pfam PF05284 Protein of unknown function (DUF736) 3 98 1.0E-33 T 28-03-2018 IPR007948 Protein of unknown function DUF736 DDI_RS08930 b8129ed14aa21d0b44f392855c486512 213 Pfam PF00857 Isochorismatase family 4 203 6.1E-36 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 DDI_RS08930 b8129ed14aa21d0b44f392855c486512 213 Gene3D G3DSA:3.40.50.850 1 213 6.6E-63 T 28-03-2018 DDI_RS08930 b8129ed14aa21d0b44f392855c486512 213 SUPERFAMILY SSF52499 2 211 3.92E-54 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 DDI_RS12985 6e4a145bb6e6672687182c655abf3586 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 9.6E-40 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 DDI_RS12985 6e4a145bb6e6672687182c655abf3586 98 Pfam PF04175 Protein of unknown function (DUF406) 7 98 3.8E-39 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 DDI_RS12985 6e4a145bb6e6672687182c655abf3586 98 Gene3D G3DSA:3.30.70.860 19 98 3.0E-32 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain DDI_RS05165 87af3377cea3824dfd5fb674ccbcab0a 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 7.2E-95 T 28-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 DDI_RS05165 87af3377cea3824dfd5fb674ccbcab0a 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 1.8E-42 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 DDI_RS19915 44362f74ed7c03c776caf581b402acb8 322 Gene3D G3DSA:1.10.3470.10 19 319 7.5E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS19915 44362f74ed7c03c776caf581b402acb8 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 3.0E-49 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS13220 a58ba05b2c3c524831fd1f9edb2ffcdf 373 SUPERFAMILY SSF51197 6 292 1.37E-73 T 28-03-2018 DDI_RS13220 a58ba05b2c3c524831fd1f9edb2ffcdf 373 Pfam PF08007 Cupin superfamily protein 10 310 3.0E-102 T 28-03-2018 IPR003347 JmjC domain DDI_RS13220 a58ba05b2c3c524831fd1f9edb2ffcdf 373 SMART SM00558 92 215 2.0E-8 T 28-03-2018 IPR003347 JmjC domain DDI_RS13220 a58ba05b2c3c524831fd1f9edb2ffcdf 373 Gene3D G3DSA:2.60.120.650 4 206 8.8E-27 T 28-03-2018 DDI_RS09175 caaecc302482cf48e10f905b68b74daf 197 Pfam PF16219 Domain of unknown function (DUF4879) 69 196 1.6E-52 T 28-03-2018 IPR032624 Protein of unknown function DUF4879 DDI_RS08525 4eba2f22ae288acae1a50e74bcbbf927 99 Gene3D G3DSA:3.40.190.10 5 69 2.5E-9 T 28-03-2018 DDI_RS08525 4eba2f22ae288acae1a50e74bcbbf927 99 Pfam PF03466 LysR substrate binding domain 13 96 2.0E-12 T 28-03-2018 IPR005119 LysR, substrate-binding DDI_RS08525 4eba2f22ae288acae1a50e74bcbbf927 99 SUPERFAMILY SSF53850 12 96 1.47E-12 T 28-03-2018 DDI_RS08440 f4e06f13a8e1458b09583bff25ba7017 204 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 6 189 1.7E-41 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 DDI_RS08440 f4e06f13a8e1458b09583bff25ba7017 204 SUPERFAMILY SSF55811 14 192 1.82E-41 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS08440 f4e06f13a8e1458b09583bff25ba7017 204 Gene3D G3DSA:3.90.79.10 4 195 3.5E-29 T 28-03-2018 DDI_RS17100 b1f60bfdff39b2b0f8ac1de5dd82550e 158 PIRSF PIRSF003174 1 158 1.3E-66 T 28-03-2018 IPR010292 Uncharacterised protein family CreA DDI_RS17100 b1f60bfdff39b2b0f8ac1de5dd82550e 158 Pfam PF05981 CreA protein 25 154 2.2E-56 T 28-03-2018 IPR010292 Uncharacterised protein family CreA DDI_RS04105 9d7a0795a12827769c9707c264141e24 450 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DDI_RS04105 9d7a0795a12827769c9707c264141e24 450 Pfam PF00324 Amino acid permease 15 449 5.7E-105 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 DDI_RS04105 9d7a0795a12827769c9707c264141e24 450 PIRSF PIRSF006060 1 449 4.7E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS10605 ae971312ec43b0a53188fbf9ad55dc2e 351 Pfam PF04338 Protein of unknown function, DUF481 144 351 8.7E-41 T 28-03-2018 IPR007433 Protein of unknown function DUF481 DDI_RS16915 ce4e5fbbe28068f5bb0851a44ee5e697 217 Gene3D G3DSA:3.30.2350.10 11 216 2.6E-60 T 28-03-2018 DDI_RS16915 ce4e5fbbe28068f5bb0851a44ee5e697 217 SUPERFAMILY SSF55120 6 214 4.48E-62 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS16915 ce4e5fbbe28068f5bb0851a44ee5e697 217 Pfam PF00849 RNA pseudouridylate synthase 20 167 6.7E-27 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS16915 ce4e5fbbe28068f5bb0851a44ee5e697 217 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 58 72 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDI_RS01880 68e7dbfe0f5f4186e68ad14ec03871fa 369 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 339 6.8E-95 T 28-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 DDI_RS01880 68e7dbfe0f5f4186e68ad14ec03871fa 369 Pfam PF05125 Phage major capsid protein, P2 family 8 339 1.2E-146 T 28-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 DDI_RS01410 02e3a6064903e5fa3aabcaa9c60d8f18 295 SUPERFAMILY SSF53067 4 113 6.91E-21 T 28-03-2018 DDI_RS01410 02e3a6064903e5fa3aabcaa9c60d8f18 295 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 283 4.6E-31 T 28-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 DDI_RS01410 02e3a6064903e5fa3aabcaa9c60d8f18 295 SUPERFAMILY SSF53067 115 284 9.07E-44 T 28-03-2018 DDI_RS01410 02e3a6064903e5fa3aabcaa9c60d8f18 295 Gene3D G3DSA:3.30.420.40 128 271 4.5E-38 T 28-03-2018 DDI_RS01410 02e3a6064903e5fa3aabcaa9c60d8f18 295 Gene3D G3DSA:3.30.420.40 2 127 3.3E-19 T 28-03-2018 DDI_RS01905 c15de51fd609289ee0ed82a69e1543f2 161 Pfam PF00959 Phage lysozyme 30 144 2.5E-13 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 DDI_RS01905 c15de51fd609289ee0ed82a69e1543f2 161 Gene3D G3DSA:1.10.530.10 1 161 8.8E-46 T 28-03-2018 DDI_RS01905 c15de51fd609289ee0ed82a69e1543f2 161 SUPERFAMILY SSF53955 3 159 1.74E-42 T 28-03-2018 IPR023346 Lysozyme-like domain DDI_RS01905 c15de51fd609289ee0ed82a69e1543f2 161 Hamap MF_04109 Endolysin. 1 161 36.169 T 28-03-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 DDI_RS20460 833f135a30ba88c02d17af69534ed2f0 155 Pfam PF13508 Acetyltransferase (GNAT) domain 50 128 1.2E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS20460 833f135a30ba88c02d17af69534ed2f0 155 Gene3D G3DSA:3.40.630.30 6 137 3.8E-14 T 28-03-2018 DDI_RS20460 833f135a30ba88c02d17af69534ed2f0 155 SUPERFAMILY SSF55729 47 133 1.6E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS16030 3cad745dfc3d7d81c7d9b694f99c0431 206 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 86 204 5.4E-27 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DDI_RS06755 e0e3f17c451fbb5091a455be015dac74 287 SUPERFAMILY SSF161098 70 257 6.41E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06755 e0e3f17c451fbb5091a455be015dac74 287 Gene3D G3DSA:1.10.3720.10 4 264 4.6E-33 T 28-03-2018 DDI_RS06755 e0e3f17c451fbb5091a455be015dac74 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 273 6.1E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12115 c14ffe6451a9ab12ab8e7e842ad3f6e9 99 SUPERFAMILY SSF101498 4 90 5.75E-12 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 DDI_RS12115 c14ffe6451a9ab12ab8e7e842ad3f6e9 99 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 89 6.6E-10 T 28-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DDI_RS12115 c14ffe6451a9ab12ab8e7e842ad3f6e9 99 Gene3D G3DSA:1.10.287.1160 62 90 9.3E-9 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 DDI_RS12115 c14ffe6451a9ab12ab8e7e842ad3f6e9 99 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 92 1.4E-18 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 DDI_RS00080 660bc2e326b0bf4c9ab16305f3bea3fa 295 SUPERFAMILY SSF53335 44 290 6.16E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS00080 660bc2e326b0bf4c9ab16305f3bea3fa 295 PIRSF PIRSF000401 1 294 5.9E-95 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DDI_RS00080 660bc2e326b0bf4c9ab16305f3bea3fa 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 6.3E-104 T 28-03-2018 DDI_RS00080 660bc2e326b0bf4c9ab16305f3bea3fa 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.875 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DDI_RS00080 660bc2e326b0bf4c9ab16305f3bea3fa 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 3.3E-120 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DDI_RS00080 660bc2e326b0bf4c9ab16305f3bea3fa 295 Gene3D G3DSA:3.40.50.150 99 292 9.3E-34 T 28-03-2018 DDI_RS03450 61744ba5fff1957f78291167d5d7fcfc 191 Pfam PF14487 Domain of unknown function (DUF4433) 11 187 1.7E-20 T 28-03-2018 IPR029494 Domain of unknown function DUF4433 DDI_RS03260 65807f20f758737d90b610ac0d7f9917 369 Gene3D G3DSA:3.40.50.720 1 361 2.5E-34 T 28-03-2018 DDI_RS03260 65807f20f758737d90b610ac0d7f9917 369 Pfam PF07993 Male sterility protein 6 238 3.0E-36 T 28-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 DDI_RS03260 65807f20f758737d90b610ac0d7f9917 369 SUPERFAMILY SSF51735 318 354 3.04E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS03260 65807f20f758737d90b610ac0d7f9917 369 SUPERFAMILY SSF51735 1 287 3.04E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS04205 9389a63d1b6f5715dead7a9f66260ff1 199 Gene3D G3DSA:3.40.50.880 1 190 5.4E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS04205 9389a63d1b6f5715dead7a9f66260ff1 199 Pfam PF01965 DJ-1/PfpI family 4 170 4.4E-43 T 28-03-2018 IPR002818 DJ-1/PfpI DDI_RS04205 9389a63d1b6f5715dead7a9f66260ff1 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 2.4E-64 T 28-03-2018 IPR006287 Protein DJ-1 DDI_RS04205 9389a63d1b6f5715dead7a9f66260ff1 199 SUPERFAMILY SSF52317 4 188 5.64E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS03385 30a34a6c08d501503d799a508ce51601 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 8.1E-21 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DDI_RS03385 30a34a6c08d501503d799a508ce51601 334 Pfam PF01548 Transposase 7 147 1.2E-20 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DDI_RS03385 30a34a6c08d501503d799a508ce51601 334 Gene3D G3DSA:1.10.340.30 107 220 7.3E-6 T 28-03-2018 DDI_RS03385 30a34a6c08d501503d799a508ce51601 334 Gene3D G3DSA:1.10.150.20 221 289 0.0043 T 28-03-2018 DDI_RS00110 3a4a61c1a7237742d075a8c3db330cce 199 Pfam PF01794 Ferric reductase like transmembrane component 48 161 5.0E-16 T 28-03-2018 IPR013130 Ferric reductase transmembrane component-like domain DDI_RS00110 3a4a61c1a7237742d075a8c3db330cce 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 3 197 21.589 T 28-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 DDI_RS19860 950e1ee5cf805ab9e6f092302481608b 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-40 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 DDI_RS19860 950e1ee5cf805ab9e6f092302481608b 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.1E-45 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 DDI_RS05945 f382c25c80c1db4994409ab6f66236c6 288 Gene3D G3DSA:1.10.3720.10 37 285 5.1E-21 T 28-03-2018 DDI_RS05945 f382c25c80c1db4994409ab6f66236c6 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 272 2.4E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05945 f382c25c80c1db4994409ab6f66236c6 288 SUPERFAMILY SSF161098 84 269 2.09E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS11925 514b70ff44a0d5b324bc449abe6ec671 170 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 169 5.3E-86 T 28-03-2018 IPR022523 Flagellar regulator, FliZ DDI_RS01580 3d3dfd35fe0de2a32cbdd55789688879 121 Pfam PF01219 Prokaryotic diacylglycerol kinase 15 116 1.3E-35 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DDI_RS01580 3d3dfd35fe0de2a32cbdd55789688879 121 Gene3D G3DSA:1.10.3830.10 6 118 4.2E-42 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DDI_RS01580 3d3dfd35fe0de2a32cbdd55789688879 121 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 69 80 - T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DDI_RS02235 91c1970aca8bffe71cba8e395cbd529b 310 Pfam PF00892 EamA-like transporter family 165 292 1.5E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS01835 798b37bb1336e8a6c480988e4c15adc4 305 Gene3D G3DSA:3.90.120.10 159 291 6.3E-16 T 28-03-2018 DDI_RS01835 798b37bb1336e8a6c480988e4c15adc4 305 Gene3D G3DSA:3.40.50.150 2 158 2.9E-42 T 28-03-2018 DDI_RS01835 798b37bb1336e8a6c480988e4c15adc4 305 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 107 121 3.4E-12 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDI_RS01835 798b37bb1336e8a6c480988e4c15adc4 305 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 150 163 3.4E-12 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDI_RS01835 798b37bb1336e8a6c480988e4c15adc4 305 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 3 19 3.4E-12 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDI_RS01835 798b37bb1336e8a6c480988e4c15adc4 305 SUPERFAMILY SSF53335 2 298 2.01E-62 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS01835 798b37bb1336e8a6c480988e4c15adc4 305 Pfam PF00145 C-5 cytosine-specific DNA methylase 2 169 1.6E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS01835 798b37bb1336e8a6c480988e4c15adc4 305 Pfam PF00145 C-5 cytosine-specific DNA methylase 236 299 2.7E-4 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS02920 95ae7bf64b5ddc00e98d9654865f2b3d 97 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 25.987 T 28-03-2018 IPR005346 RnfH protein DDI_RS02920 95ae7bf64b5ddc00e98d9654865f2b3d 97 Pfam PF03658 RnfH family Ubiquitin 4 86 1.2E-33 T 28-03-2018 IPR005346 RnfH protein DDI_RS02920 95ae7bf64b5ddc00e98d9654865f2b3d 97 Gene3D G3DSA:3.10.20.280 1 87 6.1E-34 T 28-03-2018 IPR005346 RnfH protein DDI_RS02920 95ae7bf64b5ddc00e98d9654865f2b3d 97 SUPERFAMILY SSF54285 4 78 1.7E-25 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DDI_RS20580 be30e4a1d21db4141351c9f5bfe7310d 270 SUPERFAMILY SSF161098 71 257 1.44E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20580 be30e4a1d21db4141351c9f5bfe7310d 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 259 7.5E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20580 be30e4a1d21db4141351c9f5bfe7310d 270 Gene3D G3DSA:1.10.3720.10 15 264 4.3E-23 T 28-03-2018 DDI_RS04505 c6627e8fd6342be742097a1daf44e739 150 Gene3D G3DSA:2.40.50.140 84 150 2.2E-14 T 28-03-2018 DDI_RS04505 c6627e8fd6342be742097a1daf44e739 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 149 9.1E-25 T 28-03-2018 IPR002810 NfeD-like, C-terminal domain DDI_RS04505 c6627e8fd6342be742097a1daf44e739 150 SUPERFAMILY SSF141322 107 148 6.54E-5 T 28-03-2018 DDI_RS15205 c17336c966135a368b7ad7953fcdeb34 65 Pfam PF13318 Protein of unknown function (DUF4089) 14 63 1.8E-22 T 28-03-2018 IPR025148 Protein of unknown function DUF4089 DDI_RS21350 54656f84ee60bbe2770888fcaeaaeb4e 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 2.1E-127 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 DDI_RS21350 54656f84ee60bbe2770888fcaeaaeb4e 483 PIRSF PIRSF006247 1 483 1.4E-184 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 DDI_RS21350 54656f84ee60bbe2770888fcaeaaeb4e 483 Pfam PF02386 Cation transport protein 37 477 2.7E-93 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DDI_RS10700 b0d939ed943df8274cf6741a5eef48a6 116 SUPERFAMILY SSF160719 14 115 1.01E-30 T 28-03-2018 DDI_RS10700 b0d939ed943df8274cf6741a5eef48a6 116 Pfam PF04965 Gene 25-like lysozyme 19 104 5.5E-17 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DDI_RS10700 b0d939ed943df8274cf6741a5eef48a6 116 Gene3D G3DSA:3.10.450.40 4 116 4.2E-27 T 28-03-2018 DDI_RS08650 cc4e5e201fa9dbb59199a25e8229a3ad 131 SUPERFAMILY SSF161084 4 127 1.03E-27 T 28-03-2018 DDI_RS08650 cc4e5e201fa9dbb59199a25e8229a3ad 131 Pfam PF01124 MAPEG family 3 120 1.1E-23 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein DDI_RS08650 cc4e5e201fa9dbb59199a25e8229a3ad 131 Gene3D G3DSA:1.20.120.550 1 126 3.8E-21 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain DDI_RS03200 a454973aac241050e8e26cd12a246df6 290 SUPERFAMILY SSF161098 51 277 1.83E-66 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS03200 a454973aac241050e8e26cd12a246df6 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 281 7.4E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS03200 a454973aac241050e8e26cd12a246df6 290 Gene3D G3DSA:1.20.58.370 1 41 5.4E-5 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain DDI_RS03200 a454973aac241050e8e26cd12a246df6 290 Gene3D G3DSA:1.10.3720.10 59 286 3.2E-48 T 28-03-2018 DDI_RS17635 7e39c7bd1b4e9ed857b9b41ca77ab0ab 502 SUPERFAMILY SSF56954 5 467 1.44E-55 T 28-03-2018 DDI_RS17635 7e39c7bd1b4e9ed857b9b41ca77ab0ab 502 Gene3D G3DSA:1.20.1600.10 46 469 3.6E-43 T 28-03-2018 DDI_RS17635 7e39c7bd1b4e9ed857b9b41ca77ab0ab 502 Pfam PF02321 Outer membrane efflux protein 283 462 5.7E-17 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS17635 7e39c7bd1b4e9ed857b9b41ca77ab0ab 502 Pfam PF02321 Outer membrane efflux protein 58 256 1.3E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS08385 38146f88e14a5ce2305690f368e16d2c 273 Pfam PF13649 Methyltransferase domain 48 143 2.5E-16 T 28-03-2018 DDI_RS08385 38146f88e14a5ce2305690f368e16d2c 273 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 42.657 T 28-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 DDI_RS08385 38146f88e14a5ce2305690f368e16d2c 273 Gene3D G3DSA:3.40.50.150 8 261 1.5E-50 T 28-03-2018 DDI_RS08385 38146f88e14a5ce2305690f368e16d2c 273 SUPERFAMILY SSF53335 6 260 5.06E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS11820 8cc585a257ae2975703ee3aab5902a6b 184 Gene3D G3DSA:1.20.950.20 1 183 5.2E-31 T 28-03-2018 DDI_RS11820 8cc585a257ae2975703ee3aab5902a6b 184 Pfam PF01292 Prokaryotic cytochrome b561 9 180 2.2E-25 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DDI_RS11820 8cc585a257ae2975703ee3aab5902a6b 184 SUPERFAMILY SSF81342 4 180 1.88E-35 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DDI_RS11385 b1919d711d8f8abc549fe35227b66aef 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 40.15 T 28-03-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 DDI_RS11385 b1919d711d8f8abc549fe35227b66aef 138 Gene3D G3DSA:3.90.1010.10 1 136 6.9E-47 T 28-03-2018 DDI_RS11385 b1919d711d8f8abc549fe35227b66aef 138 Pfam PF02657 Fe-S metabolism associated domain 12 131 4.5E-42 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like DDI_RS11385 b1919d711d8f8abc549fe35227b66aef 138 SUPERFAMILY SSF82649 3 135 2.62E-44 T 28-03-2018 DDI_RS12930 594872fd347931d06a50bcc020a66b7e 92 Pfam PF08891 YfcL protein 4 87 2.8E-37 T 28-03-2018 IPR014987 Uncharacterised protein family YfcL DDI_RS12930 594872fd347931d06a50bcc020a66b7e 92 Gene3D G3DSA:1.10.357.10 3 92 2.9E-5 T 28-03-2018 DDI_RS09840 94fda3c81a1caf0b60ec640600709f8c 207 Pfam PF00293 NUDIX domain 43 158 4.1E-13 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS09840 94fda3c81a1caf0b60ec640600709f8c 207 ProSitePatterns PS01293 Nudix CoA signature. 60 80 - T 28-03-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 DDI_RS09840 94fda3c81a1caf0b60ec640600709f8c 207 SUPERFAMILY SSF55811 41 194 6.5E-33 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS09840 94fda3c81a1caf0b60ec640600709f8c 207 Gene3D G3DSA:3.90.79.10 20 203 3.8E-42 T 28-03-2018 DDI_RS01970 155bf3c6b84b30dfa41f307e60ece824 100 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 88 3.1E-14 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative DDI_RS20530 6077c19b1ccda8bbb01ffb21cd77f430 151 Gene3D G3DSA:3.40.630.30 1 145 1.7E-24 T 28-03-2018 DDI_RS20530 6077c19b1ccda8bbb01ffb21cd77f430 151 SUPERFAMILY SSF55729 2 129 3.26E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS20530 6077c19b1ccda8bbb01ffb21cd77f430 151 Pfam PF13673 Acetyltransferase (GNAT) domain 46 140 9.0E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS02830 3168328d93b984024d414828bc1cddf1 458 PIRSF PIRSF006603 9 455 2.3E-61 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS02830 3168328d93b984024d414828bc1cddf1 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 426 6.6E-61 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS02830 3168328d93b984024d414828bc1cddf1 458 Pfam PF01554 MatE 23 181 9.4E-20 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS02830 3168328d93b984024d414828bc1cddf1 458 Pfam PF01554 MatE 247 411 2.6E-22 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS10375 f57abf49bab31f6687732ec5a3039a08 86 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 4 81 9.8E-30 T 28-03-2018 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 DDI_RS10375 f57abf49bab31f6687732ec5a3039a08 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 15 36 4.5E-26 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS10375 f57abf49bab31f6687732ec5a3039a08 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 36 51 4.5E-26 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS10375 f57abf49bab31f6687732ec5a3039a08 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 51 73 4.5E-26 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS10375 f57abf49bab31f6687732ec5a3039a08 86 PIRSF PIRSF004669 1 86 5.0E-22 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS10375 f57abf49bab31f6687732ec5a3039a08 86 Pfam PF01313 Bacterial export proteins, family 3 4 73 9.7E-25 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DDI_RS12630 a7fbb6f0028691692421b6866c8fa59c 399 Gene3D G3DSA:1.20.1630.10 42 337 9.2E-43 T 28-03-2018 DDI_RS12405 c8fec853d9512294e7db1cf92414ad42 91 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12405 c8fec853d9512294e7db1cf92414ad42 91 SUPERFAMILY SSF46785 1 87 1.62E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12405 c8fec853d9512294e7db1cf92414ad42 91 Gene3D G3DSA:1.10.10.10 1 83 6.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS12405 c8fec853d9512294e7db1cf92414ad42 91 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12405 c8fec853d9512294e7db1cf92414ad42 91 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS12405 c8fec853d9512294e7db1cf92414ad42 91 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDI_RS04060 9f2cd46d721cb7c13d8f8869b4de07db 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 2.8E-129 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 DDI_RS04060 9f2cd46d721cb7c13d8f8869b4de07db 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 41.869 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 DDI_RS09470 ee9fabf9193fd1909a7cacf22caff26d 252 Gene3D G3DSA:3.20.20.190 9 252 1.5E-54 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 DDI_RS09470 ee9fabf9193fd1909a7cacf22caff26d 252 SUPERFAMILY SSF51695 19 251 1.92E-59 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 DDI_RS09470 ee9fabf9193fd1909a7cacf22caff26d 252 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 22 191 7.9E-32 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DDI_RS00140 d177ff07c6274940c307d12b62a25c4f 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 6.0E-41 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DDI_RS00140 d177ff07c6274940c307d12b62a25c4f 162 Pfam PF04093 rod shape-determining protein MreD 7 154 1.9E-43 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DDI_RS00140 d177ff07c6274940c307d12b62a25c4f 162 PIRSF PIRSF018472 1 162 2.2E-56 T 28-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type DDI_RS08700 37eba0b689430018c96b86a621c05b57 261 Pfam PF00950 ABC 3 transport family 1 257 2.8E-81 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DDI_RS08700 37eba0b689430018c96b86a621c05b57 261 Gene3D G3DSA:1.10.3470.10 1 261 4.8E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS08700 37eba0b689430018c96b86a621c05b57 261 SUPERFAMILY SSF81345 3 257 4.05E-38 T 28-03-2018 IPR029022 ABC transporter, BtuC-like DDI_RS20790 dbab5395cb8c6a21a83f6035621fade8 307 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 217 307 1.0E-20 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDI_RS20790 dbab5395cb8c6a21a83f6035621fade8 307 SUPERFAMILY SSF53901 155 307 6.12E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS20790 dbab5395cb8c6a21a83f6035621fade8 307 Gene3D G3DSA:3.40.47.10 149 307 1.8E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 SMART SM00047 145 309 2.6E-48 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 75 97 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 174 192 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 216 237 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 54 74 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 150 173 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 194 215 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 260 279 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 280 298 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 114 139 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 298 315 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 PRINTS PR01002 Flagellar protein FlgJ signature 238 259 1.6E-101 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 165 298 1.4E-19 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 Gene3D G3DSA:1.10.530.10 149 301 5.2E-33 T 28-03-2018 DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 Pfam PF10135 Rod binding protein 51 98 5.4E-16 T 28-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal DDI_RS12065 e1d1b6fba11330e7aad286c2dd9f8540 316 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 298 6.4E-104 T 28-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 DDI_RS21475 624564fdae02b9e5ee51513f25b214d5 59 Pfam PF06568 Domain of unknown function (DUF1127) 22 56 1.4E-6 T 28-03-2018 IPR009506 Protein of unknown function DUF1127 DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 SUPERFAMILY SSF88946 2 103 1.4E-29 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 5.8E-98 T 28-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 Pfam PF08281 Sigma-70, region 4 133 180 4.8E-18 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 Gene3D G3DSA:1.10.10.10 114 187 4.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 SUPERFAMILY SSF88659 122 183 2.62E-18 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 4.4E-31 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 Gene3D G3DSA:1.10.1740.10 1 113 1.4E-29 T 28-03-2018 DDI_RS14300 035cce1741fbc8e6f7654171e05785d2 191 Pfam PF04542 Sigma-70 region 2 25 91 1.7E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDI_RS15655 4c8116ee6b1e8dc60be421d64f5cffd6 594 Pfam PF07244 Surface antigen variable number repeat 206 260 1.8E-7 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDI_RS15655 4c8116ee6b1e8dc60be421d64f5cffd6 594 Pfam PF17243 POTRA domain TamA domain 1 42 116 3.6E-19 T 28-03-2018 IPR035243 TamA, POTRA domain 1 DDI_RS15655 4c8116ee6b1e8dc60be421d64f5cffd6 594 Pfam PF01103 Surface antigen 299 591 3.3E-31 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DDI_RS15655 4c8116ee6b1e8dc60be421d64f5cffd6 594 Gene3D G3DSA:2.40.160.50 238 593 4.1E-58 T 28-03-2018 DDI_RS15655 4c8116ee6b1e8dc60be421d64f5cffd6 594 Gene3D G3DSA:3.10.20.310 118 205 5.3E-13 T 28-03-2018 DDI_RS00420 74bd1dcc87fb6a2a79eaff575e1c5eed 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.5E-161 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DDI_RS00420 74bd1dcc87fb6a2a79eaff575e1c5eed 386 SUPERFAMILY SSF56059 1 168 2.19E-91 T 28-03-2018 DDI_RS00420 74bd1dcc87fb6a2a79eaff575e1c5eed 386 SUPERFAMILY SSF56059 266 383 2.19E-91 T 28-03-2018 DDI_RS00420 74bd1dcc87fb6a2a79eaff575e1c5eed 386 SUPERFAMILY SSF52440 173 279 2.88E-40 T 28-03-2018 IPR016185 Pre-ATP-grasp domain DDI_RS08215 b6300cd493151b73f3eeca777d890a51 258 Pfam PF00977 Histidine biosynthesis protein 5 239 5.3E-78 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 DDI_RS08215 b6300cd493151b73f3eeca777d890a51 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.5E-115 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DDI_RS08215 b6300cd493151b73f3eeca777d890a51 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.448 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DDI_RS08215 b6300cd493151b73f3eeca777d890a51 258 Gene3D G3DSA:3.20.20.70 4 252 7.5E-59 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS08215 b6300cd493151b73f3eeca777d890a51 258 SUPERFAMILY SSF51366 1 257 1.26E-74 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 DDI_RS05870 e93ba4d3308d69ae8657c2d027ebd72c 132 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 5 129 1.7E-51 T 28-03-2018 IPR010005 Formate hydrogenlyase maturation HycH DDI_RS05870 e93ba4d3308d69ae8657c2d027ebd72c 132 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 6 130 4.0E-28 T 28-03-2018 IPR010005 Formate hydrogenlyase maturation HycH DDI_RS14510 2a24bb79d55e2e2b1ceb6d06c8e0ca06 151 SUPERFAMILY SSF57716 111 149 1.21E-9 T 28-03-2018 DDI_RS14510 2a24bb79d55e2e2b1ceb6d06c8e0ca06 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DDI_RS14510 2a24bb79d55e2e2b1ceb6d06c8e0ca06 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 4.0E-51 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DDI_RS14510 2a24bb79d55e2e2b1ceb6d06c8e0ca06 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.256 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DDI_RS14510 2a24bb79d55e2e2b1ceb6d06c8e0ca06 151 SUPERFAMILY SSF109635 9 109 1.18E-37 T 28-03-2018 DDI_RS14510 2a24bb79d55e2e2b1ceb6d06c8e0ca06 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 4.0E-10 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DDI_RS12240 2c7528955d7dd7768d38d12c4c75cd3c 146 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 7 139 8.1E-45 T 28-03-2018 IPR020000 Bacteriophage P2, LysB DDI_RS16830 40d988534307e96cfb158f35ee53510e 36 TIGRFAM TIGR02616 tnaC_leader: tryptophanase leader peptide 17 31 6.0E-7 T 28-03-2018 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 DDI_RS16380 38fc850ab73af617eff99747a150ba79 156 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 14 154 1.7E-35 T 28-03-2018 IPR011747 Conserved hypothetical protein CHP02241 DDI_RS16380 38fc850ab73af617eff99747a150ba79 156 Pfam PF06841 T4-like virus tail tube protein gp19 17 153 1.3E-44 T 28-03-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 DDI_RS05255 15b3a77ed03d0da216751bbcbdf7b486 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 8.0E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05255 15b3a77ed03d0da216751bbcbdf7b486 338 Gene3D G3DSA:3.40.50.720 1 207 1.9E-40 T 28-03-2018 DDI_RS05255 15b3a77ed03d0da216751bbcbdf7b486 338 SUPERFAMILY SSF51735 1 335 7.79E-98 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS05255 15b3a77ed03d0da216751bbcbdf7b486 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 4.6E-142 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 DDI_RS05255 15b3a77ed03d0da216751bbcbdf7b486 338 Gene3D G3DSA:3.90.25.10 254 337 8.7E-21 T 28-03-2018 DDI_RS05255 15b3a77ed03d0da216751bbcbdf7b486 338 Gene3D G3DSA:3.90.25.10 208 253 3.6E-11 T 28-03-2018 DDI_RS21195 426661160cc18711f050a31559b316af 299 SUPERFAMILY SSF103481 34 132 2.22E-9 T 28-03-2018 DDI_RS21195 426661160cc18711f050a31559b316af 299 Pfam PF00892 EamA-like transporter family 138 275 3.9E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS21195 426661160cc18711f050a31559b316af 299 Pfam PF00892 EamA-like transporter family 3 128 9.4E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS21195 426661160cc18711f050a31559b316af 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 2.2E-78 T 28-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 DDI_RS21195 426661160cc18711f050a31559b316af 299 SUPERFAMILY SSF103481 177 277 3.66E-7 T 28-03-2018 DDI_RS16130 8e2cd08020d2c456c45cb9c3e6c256e9 118 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 29 113 1.7E-5 T 28-03-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 DDI_RS00580 e4638f318e12814c4a18f8138ae14ea8 511 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 4 455 1.1E-99 T 28-03-2018 IPR013381 CRISPR-associated protein Cse1 DDI_RS00580 e4638f318e12814c4a18f8138ae14ea8 511 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 3 494 6.3E-129 T 28-03-2018 IPR013381 CRISPR-associated protein Cse1 DDI_RS13875 9dbdcb3238fadde16cc014b4c4a64bae 539 Gene3D G3DSA:1.10.10.60 281 333 1.9E-9 T 28-03-2018 DDI_RS13875 9dbdcb3238fadde16cc014b4c4a64bae 539 Pfam PF01610 Transposase 414 533 7.2E-11 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DDI_RS13875 9dbdcb3238fadde16cc014b4c4a64bae 539 Pfam PF01610 Transposase 160 294 1.5E-19 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DDI_RS13730 72ae7d1fa5137b25ab3a3d1abe6016ed 137 Gene3D G3DSA:3.10.180.10 1 135 1.4E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS13730 72ae7d1fa5137b25ab3a3d1abe6016ed 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 5.0E-11 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DDI_RS13730 72ae7d1fa5137b25ab3a3d1abe6016ed 137 SUPERFAMILY SSF54593 2 128 1.34E-25 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS15620 f001cc6d88900709ed0aa675083e7aeb 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 2.2E-100 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DDI_RS15620 f001cc6d88900709ed0aa675083e7aeb 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.683 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DDI_RS15620 f001cc6d88900709ed0aa675083e7aeb 273 Pfam PF02673 Bacitracin resistance protein BacA 10 267 1.6E-87 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DDI_RS03600 81dc10bba8ceea2bf3c5320461cde48d 128 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 38 116 2.0E-24 T 28-03-2018 IPR022204 Prepilin peptidase dependent protein C DDI_RS03600 81dc10bba8ceea2bf3c5320461cde48d 128 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site DDI_RS15545 7fcc457c6d517b71473ee8b37a6d19ab 446 Pfam PF13378 Enolase C-terminal domain-like 189 406 1.8E-37 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS15545 7fcc457c6d517b71473ee8b37a6d19ab 446 SMART SM00922 185 285 6.9E-18 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDI_RS15545 7fcc457c6d517b71473ee8b37a6d19ab 446 SUPERFAMILY SSF51604 139 416 3.38E-84 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS15545 7fcc457c6d517b71473ee8b37a6d19ab 446 SUPERFAMILY SSF54826 7 137 1.4E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15545 7fcc457c6d517b71473ee8b37a6d19ab 446 Gene3D G3DSA:3.20.20.120 141 413 4.1E-53 T 28-03-2018 IPR029065 Enolase C-terminal domain-like DDI_RS15545 7fcc457c6d517b71473ee8b37a6d19ab 446 Gene3D G3DSA:3.30.390.10 1 140 1.5E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDI_RS15545 7fcc457c6d517b71473ee8b37a6d19ab 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 1.7E-271 T 28-03-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 DDI_RS12555 5f0e58637d6775c260ba2f58d0251b4a 211 SUPERFAMILY SSF81342 3 208 1.88E-55 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DDI_RS12555 5f0e58637d6775c260ba2f58d0251b4a 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 8.1E-23 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DDI_RS12555 5f0e58637d6775c260ba2f58d0251b4a 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 6 204 1.7E-65 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 DDI_RS12555 5f0e58637d6775c260ba2f58d0251b4a 211 Gene3D G3DSA:1.20.950.20 1 211 3.1E-55 T 28-03-2018 DDI_RS10890 390db7106b59c7b629b557c85a0d2fd3 239 Pfam PF02754 Cysteine-rich domain 133 216 2.7E-13 T 28-03-2018 IPR004017 Cysteine-rich domain DDI_RS10890 390db7106b59c7b629b557c85a0d2fd3 239 Pfam PF02754 Cysteine-rich domain 3 85 2.4E-13 T 28-03-2018 IPR004017 Cysteine-rich domain DDI_RS16260 f5d0e2cf16658bef6179ebc0ca9909fe 139 Pfam PF06252 Protein of unknown function (DUF1018) 20 134 4.0E-38 T 28-03-2018 IPR009363 Bacteriophage Mu, Gp16 DDI_RS16655 19aa8b4f5cd59978af0a4736a74d7e08 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 1.2E-16 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS16655 19aa8b4f5cd59978af0a4736a74d7e08 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 1.2E-16 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS16655 19aa8b4f5cd59978af0a4736a74d7e08 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 1.2E-16 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS16655 19aa8b4f5cd59978af0a4736a74d7e08 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 1.2E-16 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS16655 19aa8b4f5cd59978af0a4736a74d7e08 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 DDI_RS16655 19aa8b4f5cd59978af0a4736a74d7e08 401 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 2.8E-30 T 28-03-2018 IPR018076 Type II secretion system F domain DDI_RS16655 19aa8b4f5cd59978af0a4736a74d7e08 401 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 5.8E-22 T 28-03-2018 IPR018076 Type II secretion system F domain DDI_RS01955 f1d4a8933c50b6a118928492fb7e927c 207 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 86 206 1.7E-27 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DDI_RS07690 076f866de770e9ee11c8d34b1694747d 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 4.0E-45 T 28-03-2018 IPR020489 Uncharacterised protein family YejG DDI_RS07690 076f866de770e9ee11c8d34b1694747d 114 Pfam PF13989 YejG-like protein 4 108 1.7E-51 T 28-03-2018 IPR020489 Uncharacterised protein family YejG DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 4.4E-76 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.787 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 1.5E-37 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 SUPERFAMILY SSF55200 90 179 3.4E-35 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 28-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 Gene3D G3DSA:3.30.110.10 87 180 2.3E-35 T 28-03-2018 DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 Gene3D G3DSA:3.10.20.80 10 86 6.0E-32 T 28-03-2018 DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.1E-31 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDI_RS10015 dc093d5c9c99bc670817347cec6fb0b3 180 SUPERFAMILY SSF54364 13 86 2.35E-29 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDI_RS03575 99ca8507898e054bbd96d4fc6571b6f4 287 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 284 3.1E-103 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 DDI_RS03575 99ca8507898e054bbd96d4fc6571b6f4 287 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 DDI_RS03575 99ca8507898e054bbd96d4fc6571b6f4 287 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 278 7.9E-79 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 DDI_RS03575 99ca8507898e054bbd96d4fc6571b6f4 287 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 283 20.38 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 DDI_RS12100 57dfb4b2748f8311e9d7d367f01f318c 134 Pfam PF00460 Flagella basal body rod protein 7 37 9.5E-10 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DDI_RS12100 57dfb4b2748f8311e9d7d367f01f318c 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 5.8E-54 T 28-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 DDI_RS12100 57dfb4b2748f8311e9d7d367f01f318c 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site DDI_RS12100 57dfb4b2748f8311e9d7d367f01f318c 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 130 2.9E-12 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DDI_RS11085 830ac9b96eef9f7272ff6f19bfb55c44 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 6.1E-85 T 28-03-2018 DDI_RS11085 830ac9b96eef9f7272ff6f19bfb55c44 263 Gene3D G3DSA:3.40.50.720 3 262 6.0E-46 T 28-03-2018 DDI_RS11085 830ac9b96eef9f7272ff6f19bfb55c44 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11085 830ac9b96eef9f7272ff6f19bfb55c44 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11085 830ac9b96eef9f7272ff6f19bfb55c44 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11085 830ac9b96eef9f7272ff6f19bfb55c44 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDI_RS11085 830ac9b96eef9f7272ff6f19bfb55c44 263 PIRSF PIRSF000094 1 260 5.7E-124 T 28-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDI_RS11085 830ac9b96eef9f7272ff6f19bfb55c44 263 SUPERFAMILY SSF51735 5 253 1.46E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS14560 b08aa9c8a759c481535612853d70e890 176 Gene3D G3DSA:3.40.50.2020 2 176 1.4E-42 T 28-03-2018 DDI_RS14560 b08aa9c8a759c481535612853d70e890 176 Pfam PF00156 Phosphoribosyl transferase domain 12 160 9.4E-25 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDI_RS14560 b08aa9c8a759c481535612853d70e890 176 SUPERFAMILY SSF53271 3 175 1.26E-54 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS14560 b08aa9c8a759c481535612853d70e890 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 2.4E-72 T 28-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 DDI_RS14130 e7b6c044d09e1c6fde1cc257c04363e1 346 Pfam PF03824 High-affinity nickel-transport protein 70 330 1.0E-38 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DDI_RS10820 8e03047c6477474c6ff9f122f52a42ef 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 438 1.6E-57 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain DDI_RS10820 8e03047c6477474c6ff9f122f52a42ef 533 SUPERFAMILY SSF53850 24 523 4.16E-85 T 28-03-2018 DDI_RS10820 8e03047c6477474c6ff9f122f52a42ef 533 Gene3D G3DSA:3.90.76.10 51 147 3.3E-13 T 28-03-2018 DDI_RS10820 8e03047c6477474c6ff9f122f52a42ef 533 Gene3D G3DSA:3.40.190.10 148 292 2.3E-21 T 28-03-2018 DDI_RS10820 8e03047c6477474c6ff9f122f52a42ef 533 Gene3D G3DSA:3.10.105.10 293 496 1.6E-37 T 28-03-2018 DDI_RS10820 8e03047c6477474c6ff9f122f52a42ef 533 PIRSF PIRSF002741 17 528 1.8E-52 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDI_RS15495 b6cc266214398b1deafb5e6ca828e470 524 Gene3D G3DSA:1.20.1250.20 9 218 2.5E-19 T 28-03-2018 DDI_RS15495 b6cc266214398b1deafb5e6ca828e470 524 Pfam PF13347 MFS/sugar transport protein 13 451 7.0E-52 T 28-03-2018 DDI_RS15495 b6cc266214398b1deafb5e6ca828e470 524 SUPERFAMILY SSF103473 10 449 2.35E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS15495 b6cc266214398b1deafb5e6ca828e470 524 Gene3D G3DSA:1.20.1250.20 234 466 9.2E-13 T 28-03-2018 DDI_RS19140 5c374a8733274cc622b24d6db6168e66 141 Pfam PF05656 Protein of unknown function (DUF805) 7 132 9.7E-20 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 DDI_RS16420 9aea69c74bb5f5dc1ff4452318a5af83 1373 Pfam PF04865 Baseplate J-like protein 1087 1243 2.1E-9 T 28-03-2018 IPR006949 Baseplate protein J-like DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 SUPERFAMILY SSF52964 28 159 6.93E-35 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Gene3D G3DSA:3.40.50.10070 22 161 6.3E-35 T 28-03-2018 DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 425 1.8E-152 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Hamap MF_00671 Protein TolB [tolB]. 5 424 33.414 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Pfam PF04052 TolB amino-terminal domain 23 120 1.1E-31 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Gene3D G3DSA:2.130.10.150 162 250 5.6E-12 T 28-03-2018 DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Gene3D G3DSA:2.130.10.150 251 427 5.2E-32 T 28-03-2018 DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 SUPERFAMILY SSF69304 158 426 2.62E-53 T 28-03-2018 DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Pfam PF07676 WD40-like Beta Propeller Repeat 280 313 5.6E-10 T 28-03-2018 IPR011659 WD40-like Beta Propeller DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Pfam PF07676 WD40-like Beta Propeller Repeat 197 221 4.5E-4 T 28-03-2018 IPR011659 WD40-like Beta Propeller DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Pfam PF07676 WD40-like Beta Propeller Repeat 367 396 0.0025 T 28-03-2018 IPR011659 WD40-like Beta Propeller DDI_RS05180 348c1a7fefe19d92c90b6befe70343fa 428 Pfam PF07676 WD40-like Beta Propeller Repeat 235 270 1.3E-9 T 28-03-2018 IPR011659 WD40-like Beta Propeller DDI_RS14100 e65ce4ff9ad21266c10203e832661d56 248 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 1.2E-89 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 DDI_RS14100 e65ce4ff9ad21266c10203e832661d56 248 SUPERFAMILY SSF75217 4 165 3.07E-38 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS14100 e65ce4ff9ad21266c10203e832661d56 248 PIRSF PIRSF004808 1 244 5.5E-77 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 DDI_RS14100 e65ce4ff9ad21266c10203e832661d56 248 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.1E-33 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDI_RS14100 e65ce4ff9ad21266c10203e832661d56 248 Gene3D G3DSA:3.40.1280.10 1 164 7.8E-43 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS04365 44c483c321c82d729abf98e26ecbc086 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 8.7E-33 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA DDI_RS04365 44c483c321c82d729abf98e26ecbc086 67 SUPERFAMILY SSF68989 1 67 3.01E-31 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA DDI_RS04365 44c483c321c82d729abf98e26ecbc086 67 Gene3D G3DSA:1.20.1280.40 1 66 2.2E-33 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA DDI_RS09070 496e5a904815410547d7254afae64e9c 98 Gene3D G3DSA:3.30.70.1060 1 98 5.3E-29 T 28-03-2018 DDI_RS09070 496e5a904815410547d7254afae64e9c 98 SUPERFAMILY SSF54909 1 97 2.5E-32 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS09070 496e5a904815410547d7254afae64e9c 98 Pfam PF03795 YCII-related domain 1 95 3.0E-30 T 28-03-2018 IPR005545 YCII-related DDI_RS02505 1bb91110f246c47969dbc291a8e77bac 461 SUPERFAMILY SSF56954 2 460 9.42E-100 T 28-03-2018 DDI_RS02505 1bb91110f246c47969dbc291a8e77bac 461 Pfam PF02321 Outer membrane efflux protein 275 456 9.7E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS02505 1bb91110f246c47969dbc291a8e77bac 461 Pfam PF02321 Outer membrane efflux protein 66 248 1.0E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 DDI_RS02505 1bb91110f246c47969dbc291a8e77bac 461 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 458 1.7E-105 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 DDI_RS02505 1bb91110f246c47969dbc291a8e77bac 461 Gene3D G3DSA:1.20.1600.10 19 461 1.9E-88 T 28-03-2018 DDI_RS06005 216f5395de27b875ac1a57bbc31389e3 149 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 5 147 2.5E-52 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS06005 216f5395de27b875ac1a57bbc31389e3 149 Pfam PF06754 Phosphonate metabolism protein PhnG 6 146 3.9E-54 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS01890 8291800311b4ddd86ea7440881479e38 154 Pfam PF05926 Phage head completion protein (GPL) 16 154 1.0E-57 T 28-03-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 DDI_RS09085 e7da328f118ead26517aceba45c29966 186 Pfam PF04279 Intracellular septation protein A 1 175 6.4E-67 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 DDI_RS09085 e7da328f118ead26517aceba45c29966 186 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.735 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 DDI_RS09085 e7da328f118ead26517aceba45c29966 186 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 3.7E-65 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 DDI_RS03630 ed6a521ded04b03ac544d5dbc430457e 384 Pfam PF06725 3D domain 279 355 1.8E-24 T 28-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DDI_RS03630 ed6a521ded04b03ac544d5dbc430457e 384 SMART SM00925 125 259 2.8E-70 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DDI_RS03630 ed6a521ded04b03ac544d5dbc430457e 384 Gene3D G3DSA:2.40.240.50 56 261 7.3E-60 T 28-03-2018 DDI_RS03630 ed6a521ded04b03ac544d5dbc430457e 384 SUPERFAMILY SSF50685 26 356 2.48E-110 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDI_RS03630 ed6a521ded04b03ac544d5dbc430457e 384 PIRSF PIRSF019422 2 366 1.5E-86 T 28-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A DDI_RS03630 ed6a521ded04b03ac544d5dbc430457e 384 Pfam PF03562 MltA specific insert domain 94 259 6.6E-42 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DDI_RS17330 f4d4681150a3a3f40d0acb65ca7e4240 262 Pfam PF01061 ABC-2 type transporter 20 223 5.1E-21 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DDI_RS02245 815bdd4effd3bccebd1117fca3386e1d 186 SUPERFAMILY SSF53271 35 170 4.04E-22 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like DDI_RS02245 815bdd4effd3bccebd1117fca3386e1d 186 Gene3D G3DSA:3.40.50.2020 5 186 3.0E-14 T 28-03-2018 DDI_RS02245 815bdd4effd3bccebd1117fca3386e1d 186 Pfam PF00156 Phosphoribosyl transferase domain 36 161 2.0E-11 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDI_RS10995 533f1ec06a36abd4c751e4da103a57b8 777 Gene3D G3DSA:1.10.439.10 21 184 4.6E-49 T 28-03-2018 IPR023343 Penicillin amidase type, domain1 GO:0016811 DDI_RS10995 533f1ec06a36abd4c751e4da103a57b8 777 Gene3D G3DSA:3.60.20.10 260 640 1.5E-58 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS10995 533f1ec06a36abd4c751e4da103a57b8 777 Gene3D G3DSA:3.60.20.10 656 765 9.1E-16 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS10995 533f1ec06a36abd4c751e4da103a57b8 777 SUPERFAMILY SSF56235 47 762 2.83E-152 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS10995 533f1ec06a36abd4c751e4da103a57b8 777 PIRSF PIRSF001227 11 772 6.2E-135 T 28-03-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 DDI_RS10995 533f1ec06a36abd4c751e4da103a57b8 777 Pfam PF01804 Penicillin amidase 51 758 4.2E-133 T 28-03-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 DDI_RS17465 1b6caaebcaba5032eedcfb1a4944e535 141 Gene3D G3DSA:3.30.300.20 48 141 7.3E-22 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta DDI_RS17465 1b6caaebcaba5032eedcfb1a4944e535 141 Pfam PF02566 OsmC-like protein 43 138 6.0E-15 T 28-03-2018 IPR003718 OsmC/Ohr family DDI_RS17465 1b6caaebcaba5032eedcfb1a4944e535 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 140 4.4E-54 T 28-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DDI_RS17465 1b6caaebcaba5032eedcfb1a4944e535 141 SUPERFAMILY SSF82784 1 140 6.28E-42 T 28-03-2018 IPR003718 OsmC/Ohr family DDI_RS17465 1b6caaebcaba5032eedcfb1a4944e535 141 Gene3D G3DSA:2.20.25.10 4 47 8.8E-19 T 28-03-2018 DDI_RS03255 e74617a23aff602e24eb8655666efd9f 274 Gene3D G3DSA:2.30.110.10 143 263 7.6E-9 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS03255 e74617a23aff602e24eb8655666efd9f 274 SUPERFAMILY SSF50475 133 262 4.34E-12 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS07885 8d2fd6122abe586ddf57a7f15d9fbe29 250 Pfam PF02698 DUF218 domain 48 182 1.2E-16 T 28-03-2018 IPR003848 Domain of unknown function DUF218 DDI_RS07885 8d2fd6122abe586ddf57a7f15d9fbe29 250 PIRSF PIRSF005011 1 248 6.6E-134 T 28-03-2018 IPR023604 Uncharacterised protein family SanA DDI_RS07885 8d2fd6122abe586ddf57a7f15d9fbe29 250 Gene3D G3DSA:3.40.50.620 37 174 2.0E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDI_RS16250 f57c36fbb5eb2a1aa49c7dc1788df534 99 SUPERFAMILY SSF101386 19 63 1.57E-5 T 28-03-2018 DDI_RS16250 f57c36fbb5eb2a1aa49c7dc1788df534 99 Gene3D G3DSA:1.10.287.1080 11 67 3.4E-5 T 28-03-2018 DDI_RS19095 eb7c81a4d1a242b72c6ea966e30b1bb8 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.004 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DDI_RS19095 eb7c81a4d1a242b72c6ea966e30b1bb8 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.2E-86 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DDI_RS19095 eb7c81a4d1a242b72c6ea966e30b1bb8 176 Pfam PF00227 Proteasome subunit 2 168 2.0E-22 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDI_RS19095 eb7c81a4d1a242b72c6ea966e30b1bb8 176 PIRSF PIRSF039093 1 175 4.1E-88 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DDI_RS19095 eb7c81a4d1a242b72c6ea966e30b1bb8 176 Gene3D G3DSA:3.60.20.10 2 172 1.9E-31 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS19095 eb7c81a4d1a242b72c6ea966e30b1bb8 176 SUPERFAMILY SSF56235 2 172 3.26E-58 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS15030 d80dc1708ca1e376ce429871f083dce3 291 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 14 281 8.5E-98 T 28-03-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 DDI_RS15030 d80dc1708ca1e376ce429871f083dce3 291 Pfam PF01867 CRISPR associated protein Cas1 135 245 8.5E-9 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS15030 d80dc1708ca1e376ce429871f083dce3 291 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 139 265 4.9E-29 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS15030 d80dc1708ca1e376ce429871f083dce3 291 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 13 291 17.687 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDI_RS07470 5733384777f0c05b108f7618957edb64 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 107 3.0E-34 T 28-03-2018 IPR009707 Membrane protein GlpM/YdgC DDI_RS07470 5733384777f0c05b108f7618957edb64 113 Pfam PF06942 GlpM protein 5 110 4.9E-49 T 28-03-2018 IPR009707 Membrane protein GlpM/YdgC DDI_RS11965 eff2a9a0c65e4db2a20dff22d0ecd06a 280 SUPERFAMILY SSF64518 1 280 1.19E-89 T 28-03-2018 DDI_RS11965 eff2a9a0c65e4db2a20dff22d0ecd06a 280 Pfam PF00700 Bacterial flagellin C-terminal helical region 195 279 1.3E-27 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DDI_RS11965 eff2a9a0c65e4db2a20dff22d0ecd06a 280 PRINTS PR00207 Flagellin signature 75 94 3.6E-22 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DDI_RS11965 eff2a9a0c65e4db2a20dff22d0ecd06a 280 PRINTS PR00207 Flagellin signature 36 53 3.6E-22 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DDI_RS11965 eff2a9a0c65e4db2a20dff22d0ecd06a 280 PRINTS PR00207 Flagellin signature 110 133 3.6E-22 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DDI_RS11965 eff2a9a0c65e4db2a20dff22d0ecd06a 280 Gene3D G3DSA:1.20.1330.10 39 252 7.0E-67 T 28-03-2018 DDI_RS11965 eff2a9a0c65e4db2a20dff22d0ecd06a 280 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 140 1.4E-42 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DDI_RS19555 94f5771a7323eb396393ae1b3a781f0b 149 Pfam PF00011 Hsp20/alpha crystallin family 38 133 1.6E-14 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain DDI_RS19555 94f5771a7323eb396393ae1b3a781f0b 149 SUPERFAMILY SSF49764 29 133 2.55E-15 T 28-03-2018 IPR008978 HSP20-like chaperone DDI_RS19555 94f5771a7323eb396393ae1b3a781f0b 149 Gene3D G3DSA:2.60.40.790 24 134 1.2E-14 T 28-03-2018 IPR008978 HSP20-like chaperone DDI_RS14565 1603c54d9ed91a69dd0268b65d7f2c46 150 SUPERFAMILY SSF55729 20 133 5.85E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS14565 1603c54d9ed91a69dd0268b65d7f2c46 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 134 3.7E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS14565 1603c54d9ed91a69dd0268b65d7f2c46 150 Gene3D G3DSA:3.40.630.30 7 137 5.2E-15 T 28-03-2018 DDI_RS13665 67fd16dd61ed0d316215a65675d07110 458 Pfam PF16325 Peptidase family U32 C-terminal domain 364 445 6.2E-22 T 28-03-2018 IPR032525 Peptidase family U32, C-terminal DDI_RS13665 67fd16dd61ed0d316215a65675d07110 458 Pfam PF01136 Peptidase family U32 76 348 1.3E-94 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DDI_RS13665 67fd16dd61ed0d316215a65675d07110 458 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DDI_RS13665 67fd16dd61ed0d316215a65675d07110 458 Gene3D G3DSA:3.20.20.70 7 173 1.3E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS17705 23c8f2231466e1af586c488c91eefecf 315 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 24 312 5.0E-124 T 28-03-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 DDI_RS17705 23c8f2231466e1af586c488c91eefecf 315 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 32 281 2.6E-53 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 DDI_RS17705 23c8f2231466e1af586c488c91eefecf 315 Gene3D G3DSA:3.40.190.10 24 158 4.0E-13 T 28-03-2018 DDI_RS17705 23c8f2231466e1af586c488c91eefecf 315 Gene3D G3DSA:3.40.190.10 159 315 1.8E-30 T 28-03-2018 DDI_RS17705 23c8f2231466e1af586c488c91eefecf 315 SUPERFAMILY SSF53850 29 300 2.33E-76 T 28-03-2018 DDI_RS12085 ecb38d398e6f54c88a85d80b8f995056 251 Pfam PF00460 Flagella basal body rod protein 5 35 6.3E-8 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DDI_RS12085 ecb38d398e6f54c88a85d80b8f995056 251 SUPERFAMILY SSF117143 78 209 1.7E-16 T 28-03-2018 DDI_RS12085 ecb38d398e6f54c88a85d80b8f995056 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 1.4E-32 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G DDI_RS12085 ecb38d398e6f54c88a85d80b8f995056 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 1.0E-21 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DDI_RS15260 2ebc9330dfc11c878bb82f1a993120a8 248 Pfam PF03591 AzlC protein 28 168 5.2E-40 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease DDI_RS13845 9492d24b74eaffe61bb04c6f6f2c00cd 212 Gene3D G3DSA:3.40.50.720 1 197 6.1E-26 T 28-03-2018 DDI_RS13845 9492d24b74eaffe61bb04c6f6f2c00cd 212 SUPERFAMILY SSF51735 1 197 4.57E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain DDI_RS13845 9492d24b74eaffe61bb04c6f6f2c00cd 212 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 92 5.1E-18 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DDI_RS16995 a9a521db9a383d43c5f39edd0b22fa79 305 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 28-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 DDI_RS16995 a9a521db9a383d43c5f39edd0b22fa79 305 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 294 1.1E-84 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS16995 a9a521db9a383d43c5f39edd0b22fa79 305 Gene3D G3DSA:3.90.245.10 1 304 1.3E-99 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS16995 a9a521db9a383d43c5f39edd0b22fa79 305 SUPERFAMILY SSF53590 4 301 4.71E-95 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DDI_RS08060 279cd69c7a5e411f9c8f0f81ef5c5276 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 101 28.866 T 28-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DDI_RS08060 279cd69c7a5e411f9c8f0f81ef5c5276 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 5.9E-35 T 28-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 DDI_RS08060 279cd69c7a5e411f9c8f0f81ef5c5276 106 SUPERFAMILY SSF54736 21 105 1.05E-33 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DDI_RS08060 279cd69c7a5e411f9c8f0f81ef5c5276 106 Gene3D G3DSA:3.30.1390.10 13 105 8.3E-38 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DDI_RS13020 f92e8fd41d4e7e1fa56ecaffedf809bb 615 Gene3D G3DSA:2.160.10.10 476 601 2.2E-5 T 28-03-2018 DDI_RS13020 f92e8fd41d4e7e1fa56ecaffedf809bb 615 SUPERFAMILY SSF51161 468 544 2.5E-7 T 28-03-2018 IPR011004 Trimeric LpxA-like DDI_RS01730 7927328d9929cea107dcc371207c954a 348 Pfam PF02424 ApbE family 40 323 9.9E-81 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 DDI_RS01730 7927328d9929cea107dcc371207c954a 348 SUPERFAMILY SSF143631 34 344 3.92E-95 T 28-03-2018 IPR003374 ApbE-like domain DDI_RS01730 7927328d9929cea107dcc371207c954a 348 Gene3D G3DSA:3.10.520.10 30 336 8.0E-53 T 28-03-2018 DDI_RS01730 7927328d9929cea107dcc371207c954a 348 PIRSF PIRSF006268 1 345 1.5E-87 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 DDI_RS09715 daf2822be2df3c27d381f291a38a73ff 592 Gene3D G3DSA:2.160.20.10 395 589 9.0E-57 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS09715 daf2822be2df3c27d381f291a38a73ff 592 Pfam PF03211 Pectate lyase 393 578 2.8E-48 T 28-03-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 DDI_RS09715 daf2822be2df3c27d381f291a38a73ff 592 SUPERFAMILY SSF51126 400 591 1.17E-54 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS03980 357af2748f05c62373a5e8a97412cd65 411 SMART SM00331 172 410 0.0014 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DDI_RS03980 357af2748f05c62373a5e8a97412cd65 411 Gene3D G3DSA:3.60.40.10 175 407 4.2E-18 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DDI_RS03980 357af2748f05c62373a5e8a97412cd65 411 SUPERFAMILY SSF54631 17 145 1.21E-7 T 28-03-2018 DDI_RS03980 357af2748f05c62373a5e8a97412cd65 411 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 204 406 1.5E-21 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DDI_RS03980 357af2748f05c62373a5e8a97412cd65 411 Gene3D G3DSA:3.10.580.10 19 153 2.7E-8 T 28-03-2018 DDI_RS08965 d23f8d8a0f7eb08f12d2eff2c2aa0e1f 206 Pfam PF03458 UPF0126 domain 90 162 5.5E-22 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 DDI_RS08965 d23f8d8a0f7eb08f12d2eff2c2aa0e1f 206 Pfam PF03458 UPF0126 domain 5 77 1.0E-18 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 DDI_RS07770 14abc90618bccbad9d2125f762f94b52 490 PIRSF PIRSF006060 2 488 5.2E-81 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS07770 14abc90618bccbad9d2125f762f94b52 490 Pfam PF00324 Amino acid permease 24 472 1.9E-138 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 DDI_RS07770 14abc90618bccbad9d2125f762f94b52 490 ProSitePatterns PS00218 Amino acid permeases signature. 49 80 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DDI_RS07530 7a5e48547c9f51f1f33bae8edb0196c6 150 Gene3D G3DSA:3.10.450.50 17 147 2.0E-15 T 28-03-2018 DDI_RS07530 7a5e48547c9f51f1f33bae8edb0196c6 150 SUPERFAMILY SSF54427 25 127 1.42E-18 T 28-03-2018 IPR032710 NTF2-like domain DDI_RS13680 e6440d7f12cba20064dcd96ccd51b2d0 415 Pfam PF03825 Nucleoside H+ symporter 21 411 1.9E-103 T 28-03-2018 DDI_RS13680 e6440d7f12cba20064dcd96ccd51b2d0 415 SUPERFAMILY SSF103473 15 411 1.7E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS13680 e6440d7f12cba20064dcd96ccd51b2d0 415 Gene3D G3DSA:1.20.1250.20 207 414 6.1E-22 T 28-03-2018 DDI_RS13680 e6440d7f12cba20064dcd96ccd51b2d0 415 Gene3D G3DSA:1.20.1250.20 12 202 9.5E-13 T 28-03-2018 DDI_RS21535 9fdc0a6ff07e1492e929000bd8550f0d 224 Pfam PF04493 Endonuclease V 15 206 8.7E-72 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 DDI_RS21535 9fdc0a6ff07e1492e929000bd8550f0d 224 Hamap MF_00801 Endonuclease V [nfi]. 2 216 34.2 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 SMART SM00267 357 525 2.0E-59 T 28-03-2018 IPR000160 GGDEF domain DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 Pfam PF00990 Diguanylate cyclase, GGDEF domain 368 521 2.2E-42 T 28-03-2018 IPR000160 GGDEF domain DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 SUPERFAMILY SSF103190 77 185 1.94E-7 T 28-03-2018 IPR029151 Periplasmic sensor domain-like DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 Gene3D G3DSA:3.30.450.20 68 164 3.9E-11 T 28-03-2018 DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 Gene3D G3DSA:3.30.70.270 356 525 5.2E-51 T 28-03-2018 DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 Gene3D G3DSA:3.30.450.20 165 273 6.4E-15 T 28-03-2018 DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 7.4E-50 T 28-03-2018 IPR000160 GGDEF domain DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 Pfam PF02743 Cache domain 42 248 5.9E-21 T 28-03-2018 IPR033479 Double Cache domain 1 DDI_RS16335 a04dd54dd6fe92f373834507d829a43e 536 SUPERFAMILY SSF55073 373 524 1.1E-44 T 28-03-2018 IPR029787 Nucleotide cyclase DDI_RS03835 c4b84f628058bed972beedc8bf27da0f 202 Pfam PF04170 NlpE N-terminal domain 38 121 2.9E-17 T 28-03-2018 IPR007298 Copper resistance lipoprotein NlpE DDI_RS20940 e44bc6e5300fb8d411aad0a4cf056a53 503 Gene3D G3DSA:3.40.710.10 5 338 7.0E-42 T 28-03-2018 DDI_RS20940 e44bc6e5300fb8d411aad0a4cf056a53 503 Pfam PF00144 Beta-lactamase 13 320 1.4E-33 T 28-03-2018 IPR001466 Beta-lactamase-related DDI_RS20940 e44bc6e5300fb8d411aad0a4cf056a53 503 SUPERFAMILY SSF56601 14 332 5.98E-49 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS06470 6236656d59b85e40e9455d5471e24ee7 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 94 3.7E-21 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DDI_RS06470 6236656d59b85e40e9455d5471e24ee7 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 94 2.0E-28 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit DDI_RS06470 6236656d59b85e40e9455d5471e24ee7 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 2.0E-36 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit DDI_RS06470 6236656d59b85e40e9455d5471e24ee7 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 40.683 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit DDI_RS03445 b9f95b8b465c2b7644631c9f000fe593 218 Pfam PF14487 Domain of unknown function (DUF4433) 17 217 2.7E-53 T 28-03-2018 IPR029494 Domain of unknown function DUF4433 DDI_RS00180 375f7460936287ed2d751ade8454bdee 649 Pfam PF04632 Fusaric acid resistance protein family 8 647 5.0E-153 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 DDI_RS00180 375f7460936287ed2d751ade8454bdee 649 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 648 53.13 T 28-03-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 DDI_RS10125 03c34017da2bd5b066d82a2ec8f3a232 94 Gene3D G3DSA:1.10.1220.10 3 42 1.0E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS20870 f990de6afdd8dcf47d96c83f3cd3e73f 85 SUPERFAMILY SSF47413 2 69 2.14E-27 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS20870 f990de6afdd8dcf47d96c83f3cd3e73f 85 Gene3D G3DSA:1.10.260.40 1 70 1.7E-13 T 28-03-2018 DDI_RS20870 f990de6afdd8dcf47d96c83f3cd3e73f 85 Pfam PF13693 Winged helix-turn-helix DNA-binding 4 77 3.5E-36 T 28-03-2018 DDI_RS04235 70accbb39ab4e216a39c411f719360cd 296 Pfam PF01040 UbiA prenyltransferase family 18 268 3.6E-60 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DDI_RS04235 70accbb39ab4e216a39c411f719360cd 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 17.996 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DDI_RS04235 70accbb39ab4e216a39c411f719360cd 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 283 2.4E-92 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DDI_RS04235 70accbb39ab4e216a39c411f719360cd 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site DDI_RS02585 2450977374442703d29c4de183166036 548 Pfam PF00999 Sodium/hydrogen exchanger family 7 420 2.3E-72 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DDI_RS02585 2450977374442703d29c4de183166036 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 544 1.4E-194 T 28-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 DDI_RS15575 d7dd37c90b884abdde0509c972011472 119 Pfam PF14282 FlxA-like protein 10 107 3.1E-17 T 28-03-2018 IPR025577 FlxA-like protein DDI_RS15575 d7dd37c90b884abdde0509c972011472 119 Gene3D G3DSA:1.20.1170.10 2 115 1.4E-6 T 28-03-2018 DDI_RS04480 c8decd497a51eceda01561fde84740b3 457 Gene3D G3DSA:2.160.20.10 44 449 8.3E-96 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS04480 c8decd497a51eceda01561fde84740b3 457 SMART SM00710 259 279 720.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS04480 c8decd497a51eceda01561fde84740b3 457 SMART SM00710 199 225 7000.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS04480 c8decd497a51eceda01561fde84740b3 457 SMART SM00710 285 306 0.16 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS04480 c8decd497a51eceda01561fde84740b3 457 SMART SM00710 226 249 680.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat DDI_RS04480 c8decd497a51eceda01561fde84740b3 457 SUPERFAMILY SSF51126 27 343 7.63E-93 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS04480 c8decd497a51eceda01561fde84740b3 457 SUPERFAMILY SSF51126 375 424 7.63E-93 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS04480 c8decd497a51eceda01561fde84740b3 457 Pfam PF00295 Glycosyl hydrolases family 28 61 338 5.1E-53 T 28-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 DDI_RS12075 4c9c38def7f5d32f787fab5cd5d75f83 239 Hamap MF_00415 Flagellar L-ring protein [flgH]. 14 237 27.125 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DDI_RS12075 4c9c38def7f5d32f787fab5cd5d75f83 239 PRINTS PR01008 Flagellar L-ring protein signature 80 92 2.5E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DDI_RS12075 4c9c38def7f5d32f787fab5cd5d75f83 239 PRINTS PR01008 Flagellar L-ring protein signature 153 168 2.5E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DDI_RS12075 4c9c38def7f5d32f787fab5cd5d75f83 239 PRINTS PR01008 Flagellar L-ring protein signature 216 230 2.5E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DDI_RS12075 4c9c38def7f5d32f787fab5cd5d75f83 239 PRINTS PR01008 Flagellar L-ring protein signature 200 214 2.5E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DDI_RS12075 4c9c38def7f5d32f787fab5cd5d75f83 239 PRINTS PR01008 Flagellar L-ring protein signature 179 195 2.5E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DDI_RS12075 4c9c38def7f5d32f787fab5cd5d75f83 239 Pfam PF02107 Flagellar L-ring protein 54 238 6.2E-60 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DDI_RS18390 d14989c45c3297806c1e05242e62e745 118 Pfam PF10748 Protein of unknown function (DUF2531) 8 95 2.7E-14 T 28-03-2018 IPR019684 HofP protein DDI_RS07370 9d89e11b2bff4fab844d812da33905c2 248 SMART SM00062 26 246 1.8E-68 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS07370 9d89e11b2bff4fab844d812da33905c2 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 1.2E-68 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDI_RS07370 9d89e11b2bff4fab844d812da33905c2 248 Gene3D G3DSA:3.40.190.10 13 147 4.5E-38 T 28-03-2018 DDI_RS07370 9d89e11b2bff4fab844d812da33905c2 248 SMART SM00079 26 245 1.5E-7 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DDI_RS07370 9d89e11b2bff4fab844d812da33905c2 248 Gene3D G3DSA:3.40.190.10 148 248 2.4E-17 T 28-03-2018 DDI_RS07370 9d89e11b2bff4fab844d812da33905c2 248 SUPERFAMILY SSF53850 1 245 9.42E-73 T 28-03-2018 DDI_RS06585 e965db497932c8374de16e7229d69138 167 PIRSF PIRSF028301 1 167 2.4E-60 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DDI_RS06585 e965db497932c8374de16e7229d69138 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 160 1.0E-55 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DDI_RS06585 e965db497932c8374de16e7229d69138 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 161 1.5E-53 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DDI_RS06920 5442e7b38e021700aa80d98580d11e99 342 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 40 252 7.9E-39 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 DDI_RS05465 f4fcf07de53cec9e164931147374c339 224 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 22 219 2.1E-65 T 28-03-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB DDI_RS05465 f4fcf07de53cec9e164931147374c339 224 Gene3D G3DSA:2.40.360.10 26 224 1.3E-64 T 28-03-2018 IPR023373 YmcC-like domain DDI_RS05465 f4fcf07de53cec9e164931147374c339 224 SUPERFAMILY SSF159270 27 223 6.93E-63 T 28-03-2018 IPR023373 YmcC-like domain DDI_RS03350 9dbc277ee51688b280eb449ed23001ec 331 Gene3D G3DSA:3.40.50.1820 15 320 1.9E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS03350 9dbc277ee51688b280eb449ed23001ec 331 SUPERFAMILY SSF53474 52 315 5.82E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS03350 9dbc277ee51688b280eb449ed23001ec 331 Pfam PF07859 alpha/beta hydrolase fold 71 292 4.7E-18 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 DDI_RS00190 723982176a7537a4d22859f0e7f6f123 208 PIRSF PIRSF006324 1 208 3.0E-57 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS00190 723982176a7537a4d22859f0e7f6f123 208 Pfam PF01810 LysE type translocator 15 205 5.2E-32 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS06840 0546304ac2a74cf61eb9404388208ea2 78 Pfam PF07362 Post-segregation antitoxin CcdA 9 78 4.8E-28 T 28-03-2018 IPR009956 Post-segregation antitoxin CcdA DDI_RS12355 222b0f557f9b0b9da42309658579010d 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 263 2.4E-49 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 DDI_RS12355 222b0f557f9b0b9da42309658579010d 264 SUPERFAMILY SSF52096 8 262 9.75E-39 T 28-03-2018 IPR029045 ClpP/crotonase-like domain DDI_RS12355 222b0f557f9b0b9da42309658579010d 264 Gene3D G3DSA:3.90.226.10 5 264 2.8E-41 T 28-03-2018 DDI_RS00465 a844fb29f2af7dbe68f2328ce9e8a648 193 Pfam PF02525 Flavodoxin-like fold 3 190 1.3E-36 T 28-03-2018 IPR003680 Flavodoxin-like fold DDI_RS00465 a844fb29f2af7dbe68f2328ce9e8a648 193 SUPERFAMILY SSF52218 1 192 4.19E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS00465 a844fb29f2af7dbe68f2328ce9e8a648 193 Gene3D G3DSA:3.40.50.360 1 193 2.6E-35 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS03645 1d0f6134a4c9614bb27574849795d962 289 Gene3D G3DSA:3.40.50.720 16 285 4.0E-51 T 28-03-2018 DDI_RS03645 1d0f6134a4c9614bb27574849795d962 289 Pfam PF00899 ThiF family 40 279 2.4E-35 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDI_RS03645 1d0f6134a4c9614bb27574849795d962 289 SUPERFAMILY SSF69572 19 271 3.92E-62 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDI_RS18525 9d333ca1b73febe7242b0956e7800638 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDI_RS18525 9d333ca1b73febe7242b0956e7800638 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDI_RS18525 9d333ca1b73febe7242b0956e7800638 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDI_RS18525 9d333ca1b73febe7242b0956e7800638 815 SUPERFAMILY SSF53756 9 814 0.0 T 28-03-2018 DDI_RS18525 9d333ca1b73febe7242b0956e7800638 815 PIRSF PIRSF000460 2 815 3.1E-233 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDI_RS18525 9d333ca1b73febe7242b0956e7800638 815 Gene3D G3DSA:3.40.50.2000 8 480 5.7E-197 T 28-03-2018 DDI_RS18525 9d333ca1b73febe7242b0956e7800638 815 Gene3D G3DSA:3.40.50.2000 481 795 9.2E-141 T 28-03-2018 DDI_RS04810 e5e4af3a773aaa3887c5158aad841c6f 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 3.0E-29 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 DDI_RS04810 e5e4af3a773aaa3887c5158aad841c6f 87 Gene3D G3DSA:3.30.70.260 5 87 4.6E-30 T 28-03-2018 DDI_RS04810 e5e4af3a773aaa3887c5158aad841c6f 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.692 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 DDI_RS04810 e5e4af3a773aaa3887c5158aad841c6f 87 SUPERFAMILY SSF117991 1 87 4.05E-31 T 28-03-2018 IPR027471 YbeD-like domain DDI_RS01315 0ceac6630221f826c5e41b8d14cf6ac1 276 SUPERFAMILY SSF55144 43 264 9.42E-46 T 28-03-2018 IPR009097 Cyclic phosphodiesterase DDI_RS01315 0ceac6630221f826c5e41b8d14cf6ac1 276 Pfam PF08975 Domain of unknown function (DUF1868) 50 163 3.5E-41 T 28-03-2018 IPR015069 Domain of unknown function DUF1868 DDI_RS01315 0ceac6630221f826c5e41b8d14cf6ac1 276 Gene3D G3DSA:3.90.1140.10 33 269 2.3E-65 T 28-03-2018 DDI_RS05595 74e4d19d4c165aed403ee35be968db5a 166 Pfam PF16162 Domain of unknown function (DUF4868) 6 153 1.3E-9 T 28-03-2018 IPR032359 Protein of unknown function DUF4868 DDI_RS10050 3e4d0134203b7a57c16b1634d75fd2b7 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 2.8E-231 T 28-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DDI_RS10050 3e4d0134203b7a57c16b1634d75fd2b7 417 SMART SM01329 29 413 2.6E-176 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DDI_RS10050 3e4d0134203b7a57c16b1634d75fd2b7 417 Gene3D G3DSA:3.40.718.10 9 417 5.8E-133 T 28-03-2018 DDI_RS10050 3e4d0134203b7a57c16b1634d75fd2b7 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 2.4E-116 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DDI_RS10050 3e4d0134203b7a57c16b1634d75fd2b7 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DDI_RS10050 3e4d0134203b7a57c16b1634d75fd2b7 417 SUPERFAMILY SSF53659 4 417 2.69E-146 T 28-03-2018 DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 SUPERFAMILY SSF52540 7 234 5.07E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 Pfam PF16193 AAA C-terminal domain 188 267 1.1E-22 T 28-03-2018 IPR032423 AAA C-terminal domain DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 5.1E-15 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 Gene3D G3DSA:1.20.272.10 252 346 6.2E-38 T 28-03-2018 DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 SMART SM00382 49 165 9.5E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 SUPERFAMILY SSF48019 252 434 8.5E-71 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 Gene3D G3DSA:1.10.8.60 154 243 1.3E-19 T 28-03-2018 DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 433 1.0E-64 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 Gene3D G3DSA:3.40.50.300 1 153 1.1E-28 T 28-03-2018 DDI_RS08115 2fdfc7e18d0501caf1d0a3b9f4666252 447 Gene3D G3DSA:1.10.3710.10 348 447 2.2E-31 T 28-03-2018 DDI_RS01900 759c5bf355f3daaac81367c0b650c140 98 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 88 7.0E-14 T 28-03-2018 IPR007633 Bacteriophage P2, GpY, holin DDI_RS01900 759c5bf355f3daaac81367c0b650c140 98 Pfam PF04550 Phage holin family 2 1 86 2.4E-38 T 28-03-2018 IPR007633 Bacteriophage P2, GpY, holin DDI_RS13365 1098700a55e8c0d2fa612d21691ced6f 182 Gene3D G3DSA:2.60.120.10 7 108 1.5E-33 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS13365 1098700a55e8c0d2fa612d21691ced6f 182 Pfam PF05962 HutD 11 162 1.8E-45 T 28-03-2018 IPR010282 Uncharacterised protein family HutD/Ves DDI_RS13365 1098700a55e8c0d2fa612d21691ced6f 182 Gene3D G3DSA:2.60.120.10 109 180 1.4E-4 T 28-03-2018 IPR014710 RmlC-like jelly roll fold DDI_RS13365 1098700a55e8c0d2fa612d21691ced6f 182 SUPERFAMILY SSF51182 1 179 4.98E-48 T 28-03-2018 IPR011051 RmlC-like cupin domain DDI_RS01390 484cc0908a2a9b6282105bca45f7a820 442 Gene3D G3DSA:3.40.190.10 34 224 8.1E-31 T 28-03-2018 DDI_RS01390 484cc0908a2a9b6282105bca45f7a820 442 Gene3D G3DSA:3.40.190.10 245 387 1.7E-8 T 28-03-2018 DDI_RS01390 484cc0908a2a9b6282105bca45f7a820 442 SUPERFAMILY SSF53850 30 437 8.7E-62 T 28-03-2018 DDI_RS01390 484cc0908a2a9b6282105bca45f7a820 442 Pfam PF13416 Bacterial extracellular solute-binding protein 53 366 1.1E-31 T 28-03-2018 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 SMART SM01061 1 59 1.9E-24 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 SUPERFAMILY SSF63520 172 273 2.88E-24 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 Gene3D G3DSA:2.30.24.10 1 54 6.9E-19 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 Pfam PF00874 PRD domain 184 271 5.9E-17 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 Pfam PF00874 PRD domain 76 163 1.7E-18 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 Pfam PF03123 CAT RNA binding domain 1 53 9.0E-20 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 SUPERFAMILY SSF63520 63 165 1.57E-25 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 SUPERFAMILY SSF50151 1 53 1.57E-14 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 Gene3D G3DSA:1.10.1790.10 55 164 3.8E-22 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS15860 5f2559fc7e03d91ccc33616c517c0de7 281 Gene3D G3DSA:1.10.1790.10 165 277 4.6E-23 T 28-03-2018 IPR011608 PRD domain GO:0006355 DDI_RS19690 54a1d3f5d44e2802abf24274053e8d39 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 286 2.9E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19690 54a1d3f5d44e2802abf24274053e8d39 297 SUPERFAMILY SSF161098 29 296 3.18E-61 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19690 54a1d3f5d44e2802abf24274053e8d39 297 Gene3D G3DSA:1.10.3720.10 29 287 2.0E-35 T 28-03-2018 DDI_RS09520 fcf2a47b78c037ced4ddd0d31b168195 211 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 103 191 2.8E-18 T 28-03-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 DDI_RS11065 893bd98a701785aa5de9ee34988f254c 321 SUPERFAMILY SSF161098 69 138 1.44E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS11065 893bd98a701785aa5de9ee34988f254c 321 SUPERFAMILY SSF161098 178 300 1.44E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS11065 893bd98a701785aa5de9ee34988f254c 321 Gene3D G3DSA:1.10.3720.10 4 303 1.4E-39 T 28-03-2018 DDI_RS11065 893bd98a701785aa5de9ee34988f254c 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 1.3E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS07060 b476791ce4d789ef144617054ff36b29 263 Pfam PF06167 Glucose-regulated metallo-peptidase M90 22 241 5.1E-59 T 28-03-2018 IPR010384 MtfA family DDI_RS07060 b476791ce4d789ef144617054ff36b29 263 Hamap MF_01593 Protein MtfA [mtfA]. 1 263 57.109 T 28-03-2018 IPR010384 MtfA family DDI_RS07060 b476791ce4d789ef144617054ff36b29 263 SUPERFAMILY SSF55486 32 242 4.39E-35 T 28-03-2018 DDI_RS07060 b476791ce4d789ef144617054ff36b29 263 Gene3D G3DSA:3.40.390.10 84 243 6.3E-23 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 DDI_RS13960 e4998abfc2cebbf32bc10ebb41b36f85 315 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 17 226 7.5E-35 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system DDI_RS07830 3ab8fbac7a89e8f1cfa964fd7e66f59d 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 7.7E-119 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 DDI_RS07830 3ab8fbac7a89e8f1cfa964fd7e66f59d 281 SUPERFAMILY SSF53474 5 278 9.39E-92 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS07830 3ab8fbac7a89e8f1cfa964fd7e66f59d 281 Gene3D G3DSA:3.40.50.1820 1 279 2.6E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS07830 3ab8fbac7a89e8f1cfa964fd7e66f59d 281 Pfam PF00756 Putative esterase 25 273 9.5E-65 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DDI_RS10180 ed192402667321cbe5d7c72505b57f94 103 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 89 1.0E-16 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDI_RS19390 abbf482bc903cc16ad21d20cdc713b1e 209 Pfam PF07947 YhhN family 26 207 3.6E-35 T 28-03-2018 IPR012506 YhhN-like GO:0016021 DDI_RS18810 970e320cc87438a686f3a722c0694168 446 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 446 42.221 T 28-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 DDI_RS18810 970e320cc87438a686f3a722c0694168 446 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 445 1.7E-242 T 28-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 DDI_RS19145 3dfedcfc0e3da8dd4096848f4c248c38 197 Pfam PF07305 Protein of unknown function (DUF1454) 22 196 1.7E-78 T 28-03-2018 IPR009918 Protein of unknown function DUF1454 DDI_RS11560 461e3c9379bba95cc7ea5922ff1180d1 182 SUPERFAMILY SSF55166 66 182 2.12E-31 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDI_RS11560 461e3c9379bba95cc7ea5922ff1180d1 182 Gene3D G3DSA:3.30.1380.10 59 182 3.2E-23 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDI_RS11560 461e3c9379bba95cc7ea5922ff1180d1 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.3E-61 T 28-03-2018 IPR010275 Protein of unknown function DUF882 DDI_RS03670 06b7fb5c04a65d8c49d37f41b9fa899f 366 Gene3D G3DSA:3.40.50.150 176 357 9.7E-24 T 28-03-2018 DDI_RS03670 06b7fb5c04a65d8c49d37f41b9fa899f 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 84.801 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 DDI_RS03670 06b7fb5c04a65d8c49d37f41b9fa899f 366 PIRSF PIRSF028774 1 360 9.7E-189 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 DDI_RS03670 06b7fb5c04a65d8c49d37f41b9fa899f 366 SUPERFAMILY SSF53335 184 298 2.27E-13 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS03670 06b7fb5c04a65d8c49d37f41b9fa899f 366 Pfam PF01728 FtsJ-like methyltransferase 186 263 5.2E-7 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DDI_RS16090 6345368c35379e987c8267ad5d3c4d05 48 Pfam PF06528 Phage P2 GpE 7 39 6.7E-8 T 28-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 DDI_RS19620 4263f5246063173c8b7981397048bda2 479 SUPERFAMILY SSF52540 1 147 2.19E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19620 4263f5246063173c8b7981397048bda2 479 SUPERFAMILY SSF52540 180 398 2.19E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS19620 4263f5246063173c8b7981397048bda2 479 Pfam PF13476 AAA domain 3 254 2.4E-18 T 28-03-2018 DDI_RS19620 4263f5246063173c8b7981397048bda2 479 Gene3D G3DSA:3.40.50.300 1 397 3.4E-33 T 28-03-2018 DDI_RS19620 4263f5246063173c8b7981397048bda2 479 SMART SM00382 28 394 1.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS05240 c3e32f56ec4357dc79ae5e4968a4dd7a 360 Pfam PF01263 Aldose 1-epimerase 25 348 1.3E-79 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DDI_RS05240 c3e32f56ec4357dc79ae5e4968a4dd7a 360 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 19 350 1.1E-133 T 28-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DDI_RS05240 c3e32f56ec4357dc79ae5e4968a4dd7a 360 PIRSF PIRSF005096 9 353 5.5E-108 T 28-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DDI_RS05240 c3e32f56ec4357dc79ae5e4968a4dd7a 360 Gene3D G3DSA:2.70.98.10 12 360 7.3E-100 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDI_RS05240 c3e32f56ec4357dc79ae5e4968a4dd7a 360 SUPERFAMILY SSF74650 15 350 1.13E-97 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 DDI_RS20205 78017a04af7aa20120d9b9e76b37f52a 246 Gene3D G3DSA:3.90.470.20 3 134 1.7E-8 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 DDI_RS13450 a96a7a5681667626cc3df14b9d4676fd 70 Gene3D G3DSA:3.10.290.10 1 70 6.5E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 DDI_RS13450 a96a7a5681667626cc3df14b9d4676fd 70 Pfam PF13275 S4 domain 9 68 6.5E-22 T 28-03-2018 DDI_RS13450 a96a7a5681667626cc3df14b9d4676fd 70 SUPERFAMILY SSF55174 6 68 2.49E-17 T 28-03-2018 DDI_RS20875 d5f1f675e1349e6773a263bb82f0e9c4 110 Gene3D G3DSA:1.10.260.40 10 107 8.1E-16 T 28-03-2018 DDI_RS20875 d5f1f675e1349e6773a263bb82f0e9c4 110 SMART SM00530 14 73 5.8E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS20875 d5f1f675e1349e6773a263bb82f0e9c4 110 SUPERFAMILY SSF47413 10 79 4.79E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS20875 d5f1f675e1349e6773a263bb82f0e9c4 110 Pfam PF01381 Helix-turn-helix 15 73 4.5E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS16615 743df608df48142783346aac815ee828 448 PIRSF PIRSF006060 1 447 2.6E-74 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS16615 743df608df48142783346aac815ee828 448 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DDI_RS16615 743df608df48142783346aac815ee828 448 Pfam PF00324 Amino acid permease 17 448 1.0E-115 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 DDI_RS19025 135aec16784ec19a6b565b65df1bfb92 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site DDI_RS19025 135aec16784ec19a6b565b65df1bfb92 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.657 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 DDI_RS19025 135aec16784ec19a6b565b65df1bfb92 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 8.8E-184 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 DDI_RS19025 135aec16784ec19a6b565b65df1bfb92 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 366 2.5E-188 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DDI_RS19025 135aec16784ec19a6b565b65df1bfb92 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site DDI_RS19025 135aec16784ec19a6b565b65df1bfb92 367 SUPERFAMILY SSF53335 8 365 8.37E-54 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDI_RS19025 135aec16784ec19a6b565b65df1bfb92 367 Gene3D G3DSA:3.40.50.150 174 366 6.9E-34 T 28-03-2018 DDI_RS04880 da3bd9ec157afe9bd787738c34b46766 246 SUPERFAMILY SSF161098 24 223 9.16E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS04880 da3bd9ec157afe9bd787738c34b46766 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 92 4.8E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS04880 da3bd9ec157afe9bd787738c34b46766 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 238 4.5E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS04880 da3bd9ec157afe9bd787738c34b46766 246 Gene3D G3DSA:1.10.3720.10 18 238 7.7E-39 T 28-03-2018 DDI_RS12575 d8e71d6b39728661c29a451748a92a24 241 Pfam PF00117 Glutamine amidotransferase class-I 43 204 2.0E-18 T 28-03-2018 IPR017926 Glutamine amidotransferase DDI_RS12575 d8e71d6b39728661c29a451748a92a24 241 SUPERFAMILY SSF52317 40 209 1.06E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS12575 d8e71d6b39728661c29a451748a92a24 241 Gene3D G3DSA:3.40.50.880 31 236 6.9E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS01635 46b978bd9f51f325e12a35bf8a46c4ae 225 Pfam PF09335 SNARE associated Golgi protein 48 172 5.6E-19 T 28-03-2018 IPR032816 SNARE associated Golgi protein DDI_RS21025 6b7ed9a742aee19204d73eefa4a1a322 306 Gene3D G3DSA:1.10.3720.10 3 293 1.8E-45 T 28-03-2018 DDI_RS21025 6b7ed9a742aee19204d73eefa4a1a322 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 5.2E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS21025 6b7ed9a742aee19204d73eefa4a1a322 306 SUPERFAMILY SSF161098 91 289 1.03E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS18205 90cb64a6694732bf2bba3050d1030b11 72 Gene3D G3DSA:1.20.5.300 4 50 2.3E-15 T 28-03-2018 DDI_RS18205 90cb64a6694732bf2bba3050d1030b11 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.901 T 28-03-2018 IPR007236 SlyX DDI_RS18205 90cb64a6694732bf2bba3050d1030b11 72 Pfam PF04102 SlyX 6 72 6.5E-23 T 28-03-2018 IPR007236 SlyX DDI_RS15070 9ad5c159b32b6d500fe1b37135e2a51f 132 Pfam PF07417 Transcriptional regulator Crl 16 123 2.3E-49 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 DDI_RS15070 9ad5c159b32b6d500fe1b37135e2a51f 132 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 9 132 28.657 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 Pfam PF13416 Bacterial extracellular solute-binding protein 45 334 2.5E-34 T 28-03-2018 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 SUPERFAMILY SSF53850 28 368 4.83E-104 T 28-03-2018 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 Gene3D G3DSA:3.40.190.10 200 335 3.4E-20 T 28-03-2018 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PIRSF PIRSF019574 1 369 2.6E-142 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 1.4E-70 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDI_RS07970 b89ff2265825e1e5a278a75bbdbf7ba5 369 Gene3D G3DSA:3.40.190.10 21 199 1.6E-35 T 28-03-2018 DDI_RS17090 2291d584e8f0a8f266d3a83dc4906a22 233 PIRSF PIRSF004808 1 231 6.6E-59 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 DDI_RS17090 2291d584e8f0a8f266d3a83dc4906a22 233 Gene3D G3DSA:3.40.1280.10 2 164 3.4E-32 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDI_RS17090 2291d584e8f0a8f266d3a83dc4906a22 233 SUPERFAMILY SSF75217 2 156 1.57E-29 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases DDI_RS17090 2291d584e8f0a8f266d3a83dc4906a22 233 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 4 225 3.2E-67 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 DDI_RS17090 2291d584e8f0a8f266d3a83dc4906a22 233 Pfam PF00588 SpoU rRNA Methylase family 3 153 2.1E-31 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDI_RS14445 b520110b9274ad8ddc754fddf4459ad9 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 270 9.4E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14445 b520110b9274ad8ddc754fddf4459ad9 270 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 267 1.5E-120 T 28-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 DDI_RS14445 b520110b9274ad8ddc754fddf4459ad9 270 SUPERFAMILY SSF161098 15 264 8.63E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14445 b520110b9274ad8ddc754fddf4459ad9 270 Gene3D G3DSA:1.10.3720.10 11 270 7.1E-43 T 28-03-2018 DDI_RS14445 b520110b9274ad8ddc754fddf4459ad9 270 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 9 265 1.2E-90 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DDI_RS06485 8d9f8db0f149f35d2adcb3dc3e2e915b 319 Pfam PF03547 Membrane transport protein 5 155 1.4E-30 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DDI_RS06485 8d9f8db0f149f35d2adcb3dc3e2e915b 319 Pfam PF03547 Membrane transport protein 157 313 9.7E-24 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DDI_RS20260 1f04b92c4893a8ea070c1aae1bb94772 361 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 276 1.6E-15 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DDI_RS20260 1f04b92c4893a8ea070c1aae1bb94772 361 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 7 142 2.9E-49 T 28-03-2018 DDI_RS20260 1f04b92c4893a8ea070c1aae1bb94772 361 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 354 1.3E-111 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 DDI_RS20260 1f04b92c4893a8ea070c1aae1bb94772 361 SUPERFAMILY SSF54593 7 342 1.07E-76 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS20260 1f04b92c4893a8ea070c1aae1bb94772 361 PIRSF PIRSF009283 2 356 9.3E-108 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 DDI_RS20260 1f04b92c4893a8ea070c1aae1bb94772 361 Gene3D G3DSA:3.10.180.10 5 154 2.5E-15 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS20260 1f04b92c4893a8ea070c1aae1bb94772 361 Gene3D G3DSA:3.10.180.10 155 356 1.9E-55 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS02690 b2d86d65cc6a5312456448a3f6428615 244 Pfam PF13302 Acetyltransferase (GNAT) domain 46 176 7.7E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS02690 b2d86d65cc6a5312456448a3f6428615 244 Gene3D G3DSA:3.40.630.30 19 208 1.4E-25 T 28-03-2018 DDI_RS02690 b2d86d65cc6a5312456448a3f6428615 244 SUPERFAMILY SSF55729 29 200 1.71E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS18950 bf3dd97fd2ff97e9f573be3d8bb57a69 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 5.6E-18 T 28-03-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 DDI_RS13190 febbe1ac4695b9062e0382999510f3f9 407 Gene3D G3DSA:3.90.1150.10 13 259 9.5E-43 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS13190 febbe1ac4695b9062e0382999510f3f9 407 SUPERFAMILY SSF53383 9 394 2.02E-106 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS13190 febbe1ac4695b9062e0382999510f3f9 407 Pfam PF00155 Aminotransferase class I and II 37 387 5.0E-58 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDI_RS13190 febbe1ac4695b9062e0382999510f3f9 407 Gene3D G3DSA:3.90.1150.10 260 397 1.9E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS03810 61ecf62ff64e5eaa11771401ec333c7c 129 SUPERFAMILY SSF54593 4 128 1.06E-31 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS03810 61ecf62ff64e5eaa11771401ec333c7c 129 Gene3D G3DSA:3.10.180.10 2 129 2.7E-28 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDI_RS03810 61ecf62ff64e5eaa11771401ec333c7c 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 1.1E-21 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DDI_RS05155 a1602e654cb505ecaf16dda9b46b713d 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 94 1.8E-32 T 28-03-2018 IPR011846 Cyd operon protein YbgE DDI_RS05155 a1602e654cb505ecaf16dda9b46b713d 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 97 8.2E-38 T 28-03-2018 IPR011846 Cyd operon protein YbgE DDI_RS09985 48136e6a3c6a330f67489fe4a9b0abe9 135 Pfam PF11756 Nitrous oxide-stimulated promoter 7 109 6.1E-38 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA DDI_RS09985 48136e6a3c6a330f67489fe4a9b0abe9 135 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 5 100 1.0E-24 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA DDI_RS10445 d0ee0b7225b45e5cdd24737163900cb5 392 SUPERFAMILY SSF103473 24 386 2.09E-36 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS10445 d0ee0b7225b45e5cdd24737163900cb5 392 Gene3D G3DSA:1.20.1250.20 24 206 3.5E-13 T 28-03-2018 DDI_RS10445 d0ee0b7225b45e5cdd24737163900cb5 392 Gene3D G3DSA:1.20.1250.20 211 388 5.9E-17 T 28-03-2018 DDI_RS10445 d0ee0b7225b45e5cdd24737163900cb5 392 Pfam PF07690 Major Facilitator Superfamily 32 210 8.3E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS06175 58f3d585fd67ed93ea7e7ce72d86b7f0 205 Pfam PF03737 Aldolase/RraA 34 171 1.0E-36 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DDI_RS06175 58f3d585fd67ed93ea7e7ce72d86b7f0 205 SUPERFAMILY SSF89562 22 178 3.27E-41 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DDI_RS06175 58f3d585fd67ed93ea7e7ce72d86b7f0 205 Gene3D G3DSA:3.50.30.40 9 192 4.7E-48 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DDI_RS15490 1e637cce7baaa1db9f1df1628ff7e80a 379 Gene3D G3DSA:1.50.10.10 1 379 6.9E-80 T 28-03-2018 DDI_RS15490 1e637cce7baaa1db9f1df1628ff7e80a 379 Pfam PF07470 Glycosyl Hydrolase Family 88 38 377 3.5E-103 T 28-03-2018 IPR010905 Glycosyl hydrolase, family 88 DDI_RS15490 1e637cce7baaa1db9f1df1628ff7e80a 379 SUPERFAMILY SSF48208 36 377 9.75E-91 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 SUPERFAMILY SSF56601 23 473 1.57E-101 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 9.3E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 9.3E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 9.3E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 9.3E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 9.3E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 Gene3D G3DSA:3.40.710.10 20 477 5.7E-40 T 28-03-2018 DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 23 468 2.4E-160 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS02085 16e333984e144a6fe58e3f2aa13215a9 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 46 446 7.5E-165 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDI_RS06120 71f6e22424603a52053a89e04915eb65 623 Pfam PF04183 IucA / IucC family 159 388 9.3E-42 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 DDI_RS06120 71f6e22424603a52053a89e04915eb65 623 Pfam PF06276 Ferric iron reductase FhuF-like transporter 418 577 1.8E-36 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain DDI_RS06750 d267b80dd67692ef9ab051713cb37a15 310 Gene3D G3DSA:1.10.3720.10 1 296 5.4E-39 T 28-03-2018 DDI_RS06750 d267b80dd67692ef9ab051713cb37a15 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 4.7E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS06750 d267b80dd67692ef9ab051713cb37a15 310 SUPERFAMILY SSF161098 91 292 5.67E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS05995 8654552e761e6bc0dcc53866eed57397 338 Pfam PF02661 Fic/DOC family 191 290 2.7E-19 T 28-03-2018 IPR003812 Fido domain DDI_RS05995 8654552e761e6bc0dcc53866eed57397 338 SUPERFAMILY SSF140931 166 336 6.02E-30 T 28-03-2018 IPR003812 Fido domain DDI_RS05995 8654552e761e6bc0dcc53866eed57397 338 Gene3D G3DSA:1.10.3290.10 156 338 4.2E-28 T 28-03-2018 IPR003812 Fido domain DDI_RS06695 9e5517fda196525f00b112cfba87053d 254 Pfam PF01925 Sulfite exporter TauE/SafE 13 250 1.7E-43 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DDI_RS21300 97dde190abbecb7578b8f54ed1fc9f81 495 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 8.5E-174 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DDI_RS21300 97dde190abbecb7578b8f54ed1fc9f81 495 SUPERFAMILY SSF50475 3 322 9.81E-127 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 DDI_RS21300 97dde190abbecb7578b8f54ed1fc9f81 495 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 3.7E-178 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DDI_RS21300 97dde190abbecb7578b8f54ed1fc9f81 495 Gene3D G3DSA:3.40.1670.10 323 459 7.6E-53 T 28-03-2018 DDI_RS21300 97dde190abbecb7578b8f54ed1fc9f81 495 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 74.496 T 28-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DDI_RS21300 97dde190abbecb7578b8f54ed1fc9f81 495 SUPERFAMILY SSF143968 323 485 1.11E-66 T 28-03-2018 DDI_RS21300 97dde190abbecb7578b8f54ed1fc9f81 495 Gene3D G3DSA:1.20.5.570 460 487 2.4E-19 T 28-03-2018 DDI_RS11980 d2a7c5a5829b2916282663a4d6f5a7d8 120 Pfam PF05400 Flagellar protein FliT 24 106 2.9E-19 T 28-03-2018 IPR008622 Flagellar protein FliT DDI_RS11980 d2a7c5a5829b2916282663a4d6f5a7d8 120 Gene3D G3DSA:1.20.58.380 5 90 7.4E-19 T 28-03-2018 DDI_RS11980 d2a7c5a5829b2916282663a4d6f5a7d8 120 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 119 25.431 T 28-03-2018 IPR008622 Flagellar protein FliT DDI_RS03425 34100da6744ea04db72615aaf26233ed 238 Pfam PF01863 Protein of unknown function DUF45 26 227 4.8E-59 T 28-03-2018 IPR002725 Protein of unknown function DUF45 DDI_RS03425 34100da6744ea04db72615aaf26233ed 238 Gene3D G3DSA:3.30.2010.10 55 211 0.0013 T 28-03-2018 DDI_RS14585 69bd5c67aeb4d0f8a346da40f33f08f5 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 24 115 7.0E-40 T 28-03-2018 DDI_RS14585 69bd5c67aeb4d0f8a346da40f33f08f5 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 27 106 6.2E-11 T 28-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like DDI_RS11270 7d952936f630074c311ca4c24cd58e2e 335 Gene3D G3DSA:3.20.20.100 1 317 1.4E-86 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS11270 7d952936f630074c311ca4c24cd58e2e 335 SUPERFAMILY SSF51430 1 310 4.32E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS11270 7d952936f630074c311ca4c24cd58e2e 335 Pfam PF00248 Aldo/keto reductase family 16 310 3.0E-65 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain DDI_RS08770 5836fe784075d521bff93287d20ad70d 126 SUPERFAMILY SSF81296 27 126 1.96E-22 T 28-03-2018 IPR014756 Immunoglobulin E-set DDI_RS08770 5836fe784075d521bff93287d20ad70d 126 Pfam PF04234 CopC domain 28 125 4.8E-21 T 28-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 DDI_RS08770 5836fe784075d521bff93287d20ad70d 126 Gene3D G3DSA:2.60.40.1220 27 126 1.3E-25 T 28-03-2018 DDI_RS03205 b872074c909aca62f438c80bb04d0048 440 Pfam PF01547 Bacterial extracellular solute-binding protein 75 356 7.0E-37 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 DDI_RS03205 b872074c909aca62f438c80bb04d0048 440 SUPERFAMILY SSF53850 64 439 9.06E-71 T 28-03-2018 DDI_RS03205 b872074c909aca62f438c80bb04d0048 440 Gene3D G3DSA:3.40.190.10 58 237 4.6E-29 T 28-03-2018 DDI_RS03205 b872074c909aca62f438c80bb04d0048 440 Gene3D G3DSA:3.40.190.10 238 398 6.8E-17 T 28-03-2018 DDI_RS05215 895eda5fe67168b76a75bca63f9402a7 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 1.6E-49 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DDI_RS05215 895eda5fe67168b76a75bca63f9402a7 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 230 5.2E-59 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DDI_RS18225 a8f2dc61a6c4e94c9fc3f2c974dec2b8 194 SUPERFAMILY SSF54534 2 140 9.23E-33 T 28-03-2018 DDI_RS18225 a8f2dc61a6c4e94c9fc3f2c974dec2b8 194 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 5.5E-9 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDI_RS18225 a8f2dc61a6c4e94c9fc3f2c974dec2b8 194 Gene3D G3DSA:3.10.50.40 1 164 3.3E-29 T 28-03-2018 DDI_RS19405 8cdd7c457635cd179804a11a017a2b1b 187 Gene3D G3DSA:3.40.1000.10 42 187 2.5E-17 T 28-03-2018 DDI_RS19405 8cdd7c457635cd179804a11a017a2b1b 187 Pfam PF08786 DcrB 53 181 6.7E-25 T 28-03-2018 IPR014894 Protein DcrB DDI_RS09080 2b4ff7860f1336926fce788a06993fcf 140 Gene3D G3DSA:3.10.129.10 1 140 3.8E-38 T 28-03-2018 DDI_RS09080 2b4ff7860f1336926fce788a06993fcf 140 SUPERFAMILY SSF54637 8 131 1.15E-41 T 28-03-2018 IPR029069 HotDog domain DDI_RS09080 2b4ff7860f1336926fce788a06993fcf 140 Pfam PF03061 Thioesterase superfamily 26 97 3.5E-20 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDI_RS18415 bf2fb2d93397f678fb0a95ca9ebe0fd3 183 Gene3D G3DSA:3.90.79.10 8 183 1.5E-37 T 28-03-2018 DDI_RS18415 bf2fb2d93397f678fb0a95ca9ebe0fd3 183 Pfam PF00293 NUDIX domain 48 155 6.7E-13 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDI_RS18415 bf2fb2d93397f678fb0a95ca9ebe0fd3 183 SUPERFAMILY SSF55811 2 181 5.55E-41 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 DDI_RS18415 bf2fb2d93397f678fb0a95ca9ebe0fd3 183 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDI_RS10120 7de4655b7ec34e5c6273ae8a9e4c04c5 101 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 91 1.6E-7 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDI_RS10120 7de4655b7ec34e5c6273ae8a9e4c04c5 101 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 93 4.1E-13 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDI_RS18935 2cccad2e1c7240cbd0a7d833d7da03c9 308 Gene3D G3DSA:3.30.470.10 1 141 2.9E-43 T 28-03-2018 DDI_RS18935 2cccad2e1c7240cbd0a7d833d7da03c9 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS18935 2cccad2e1c7240cbd0a7d833d7da03c9 308 Gene3D G3DSA:3.20.10.10 142 302 4.7E-49 T 28-03-2018 DDI_RS18935 2cccad2e1c7240cbd0a7d833d7da03c9 308 SUPERFAMILY SSF56752 6 306 9.16E-105 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS18935 2cccad2e1c7240cbd0a7d833d7da03c9 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 7.9E-146 T 28-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 DDI_RS18935 2cccad2e1c7240cbd0a7d833d7da03c9 308 Pfam PF01063 Amino-transferase class IV 35 267 6.6E-50 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 DDI_RS02745 2d50b6887dad39a66ba9f1154365b79a 94 Gene3D G3DSA:3.30.70.1060 1 83 1.8E-10 T 28-03-2018 DDI_RS02745 2d50b6887dad39a66ba9f1154365b79a 94 Pfam PF03795 YCII-related domain 2 79 7.0E-9 T 28-03-2018 IPR005545 YCII-related DDI_RS02745 2d50b6887dad39a66ba9f1154365b79a 94 SUPERFAMILY SSF54909 1 81 2.5E-13 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS19780 b3d54a619cf0bf73aeba403f4934c99e 581 Pfam PF05170 AsmA family 4 540 3.0E-14 T 28-03-2018 IPR007844 AsmA DDI_RS16775 599a3f1574b879b64ef39529d6fe59ac 153 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 144 5.0E-51 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 DDI_RS16775 599a3f1574b879b64ef39529d6fe59ac 153 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 145 33.538 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 DDI_RS16775 599a3f1574b879b64ef39529d6fe59ac 153 Pfam PF06610 L-alanine exporter 4 142 1.1E-66 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 DDI_RS20135 89d44e05f116a9565d8378163e8d7d6c 478 Gene3D G3DSA:3.40.50.300 5 353 4.7E-4 T 28-03-2018 DDI_RS01910 3ec05cf4391cfbe90732c20dac2f6a51 144 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 8 139 3.5E-43 T 28-03-2018 IPR020000 Bacteriophage P2, LysB DDI_RS15235 2596ea57577186e88e101ac578db2ff2 494 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 30 461 5.1E-84 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 DDI_RS15005 03affb2fafe65fec01e2c2b6a5cf85f2 507 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 6 502 2.6E-56 T 28-03-2018 IPR013381 CRISPR-associated protein Cse1 DDI_RS15005 03affb2fafe65fec01e2c2b6a5cf85f2 507 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 6 476 7.4E-59 T 28-03-2018 IPR013381 CRISPR-associated protein Cse1 DDI_RS06645 a85a111976ce11e7c7bc615013d59b25 478 Pfam PF06812 ImpA, N-terminal, type VI secretion system 15 112 1.7E-15 T 28-03-2018 IPR010657 ImpA, N-terminal DDI_RS06645 a85a111976ce11e7c7bc615013d59b25 478 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 6 472 3.8E-144 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 DDI_RS06645 a85a111976ce11e7c7bc615013d59b25 478 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 227 471 2.5E-80 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 DDI_RS16095 576ff393da1401752b1053b523a79d27 106 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 7 81 2.9E-19 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative DDI_RS18755 34f9a6e88ecbff2f028b491dd9ae9cbd 178 Gene3D G3DSA:3.40.630.30 2 177 1.1E-20 T 28-03-2018 DDI_RS18755 34f9a6e88ecbff2f028b491dd9ae9cbd 178 SUPERFAMILY SSF55729 2 159 1.38E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS18755 34f9a6e88ecbff2f028b491dd9ae9cbd 178 Pfam PF13673 Acetyltransferase (GNAT) domain 40 160 3.3E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS07590 4329f889080156041954fe4f03067527 448 Pfam PF08867 FRG domain 189 278 2.1E-19 T 28-03-2018 IPR014966 FRG domain DDI_RS07590 4329f889080156041954fe4f03067527 448 SMART SM00901 186 284 2.2E-30 T 28-03-2018 IPR014966 FRG domain DDI_RS11495 74da97d42e95e131fae834c66d2cff3a 184 Pfam PF03358 NADPH-dependent FMN reductase 1 140 3.7E-33 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DDI_RS11495 74da97d42e95e131fae834c66d2cff3a 184 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 170 3.5E-68 T 28-03-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 DDI_RS11495 74da97d42e95e131fae834c66d2cff3a 184 SUPERFAMILY SSF52218 1 156 3.89E-31 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS11495 74da97d42e95e131fae834c66d2cff3a 184 Gene3D G3DSA:3.40.50.360 1 183 3.1E-31 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS00980 9fa3eebf8fa004487e84ac8fdb4aaeb1 267 SUPERFAMILY SSF52518 3 263 2.33E-67 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold DDI_RS00980 9fa3eebf8fa004487e84ac8fdb4aaeb1 267 Gene3D G3DSA:3.40.50.970 1 266 6.9E-58 T 28-03-2018 DDI_RS00980 9fa3eebf8fa004487e84ac8fdb4aaeb1 267 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 257 5.5E-32 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDI_RS19980 633482f503e5a12e647b7aa62e133298 127 Pfam PF03899 ATP synthase I chain 16 109 1.5E-17 T 28-03-2018 IPR005598 ATP synthase protein I DDI_RS08885 d191b559c7ccf5acb4af9a6cd71702cc 82 Pfam PF04226 Transglycosylase associated protein 34 81 2.6E-14 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 DDI_RS01915 e5495c6ed74836cb0a99a7009f369b25 143 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 123 3.0E-46 T 28-03-2018 IPR009678 Bacteriophage tail completion protein R DDI_RS12210 15a565d410b1019d65a86bb248cff179 478 TIGRFAM TIGR00797 matE: MATE efflux family protein 39 443 3.5E-63 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS12210 15a565d410b1019d65a86bb248cff179 478 PIRSF PIRSF006603 19 476 3.2E-68 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS12210 15a565d410b1019d65a86bb248cff179 478 Pfam PF01554 MatE 39 199 4.8E-37 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS12210 15a565d410b1019d65a86bb248cff179 478 Pfam PF01554 MatE 269 430 2.4E-19 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS09815 d60ba40990b6462abe0399c407de2de6 233 Gene3D G3DSA:3.30.420.40 1 141 4.3E-38 T 28-03-2018 DDI_RS09815 d60ba40990b6462abe0399c407de2de6 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 4.4E-69 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DDI_RS09815 d60ba40990b6462abe0399c407de2de6 233 Pfam PF00814 Glycoprotease family 30 149 2.2E-28 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 DDI_RS09815 d60ba40990b6462abe0399c407de2de6 233 SUPERFAMILY SSF53067 110 219 3.19E-28 T 28-03-2018 DDI_RS09815 d60ba40990b6462abe0399c407de2de6 233 SUPERFAMILY SSF53067 5 106 6.04E-30 T 28-03-2018 DDI_RS16490 d2379f1fcf7b1d570f174b2c9686dada 182 SUPERFAMILY SSF53067 35 178 3.11E-21 T 28-03-2018 DDI_RS16490 d2379f1fcf7b1d570f174b2c9686dada 182 Gene3D G3DSA:3.30.420.40 34 182 9.0E-17 T 28-03-2018 DDI_RS12825 df454d4e9319ec17a2b99bb7a77bd5b6 163 Pfam PF02674 Colicin V production protein 4 142 4.4E-36 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DDI_RS21495 61f5d03ad2cd9455757f34d0f3d990e7 259 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.771 T 28-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DDI_RS21495 61f5d03ad2cd9455757f34d0f3d990e7 259 Gene3D G3DSA:3.20.20.70 1 259 3.8E-60 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS21495 61f5d03ad2cd9455757f34d0f3d990e7 259 SUPERFAMILY SSF110399 1 237 6.15E-85 T 28-03-2018 DDI_RS21495 61f5d03ad2cd9455757f34d0f3d990e7 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 2.0E-110 T 28-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DDI_RS08435 66b8db9f906bd18a9bba80182b4b221c 212 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 102 113 - T 28-03-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 DDI_RS08435 66b8db9f906bd18a9bba80182b4b221c 212 Gene3D G3DSA:3.90.730.10 28 212 1.0E-36 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DDI_RS08435 66b8db9f906bd18a9bba80182b4b221c 212 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 61 68 - T 28-03-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DDI_RS08435 66b8db9f906bd18a9bba80182b4b221c 212 Pfam PF00445 Ribonuclease T2 family 34 193 3.1E-16 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DDI_RS08435 66b8db9f906bd18a9bba80182b4b221c 212 SUPERFAMILY SSF55895 30 207 3.53E-37 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DDI_RS08545 457bcd098ad8ad4fde55349a36cb9df4 527 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 292 411 1.7E-11 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain DDI_RS08545 457bcd098ad8ad4fde55349a36cb9df4 527 Pfam PF17482 Phage tail sheath C-terminal domain 415 521 1.5E-13 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain DDI_RS01485 a638a2ae01ce6d998dbdaa0ef8baed3c 370 Pfam PF00534 Glycosyl transferases group 1 199 331 4.6E-23 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 DDI_RS01485 a638a2ae01ce6d998dbdaa0ef8baed3c 370 SUPERFAMILY SSF53756 7 365 1.57E-62 T 28-03-2018 DDI_RS01485 a638a2ae01ce6d998dbdaa0ef8baed3c 370 Gene3D G3DSA:3.40.50.2000 17 187 5.4E-7 T 28-03-2018 DDI_RS01485 a638a2ae01ce6d998dbdaa0ef8baed3c 370 Pfam PF13439 Glycosyltransferase Family 4 18 179 8.9E-17 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 DDI_RS01485 a638a2ae01ce6d998dbdaa0ef8baed3c 370 Gene3D G3DSA:3.40.50.2000 188 336 3.3E-27 T 28-03-2018 DDI_RS10910 9f6571f5ba2c275fe5ee306c533e0c7a 201 Gene3D G3DSA:3.40.50.360 2 201 1.0E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS10910 9f6571f5ba2c275fe5ee306c533e0c7a 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.736 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DDI_RS10910 9f6571f5ba2c275fe5ee306c533e0c7a 201 SUPERFAMILY SSF52218 1 199 6.77E-59 T 28-03-2018 IPR029039 Flavoprotein-like domain DDI_RS10910 9f6571f5ba2c275fe5ee306c533e0c7a 201 Pfam PF02525 Flavodoxin-like fold 3 197 9.2E-48 T 28-03-2018 IPR003680 Flavodoxin-like fold DDI_RS16545 d8b8903dde7a32e5f36584f4c6778087 473 Pfam PF00474 Sodium:solute symporter family 39 377 9.4E-26 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS06895 d18f336b4447b49160798302aacdefc3 100 Pfam PF07424 TrbM 26 85 7.3E-7 T 28-03-2018 IPR009989 TrbM DDI_RS02410 2f8e8206816562b6731772661171e7c8 223 Pfam PF01810 LysE type translocator 13 213 1.3E-24 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS01095 94c013acbb5f129a5c5591c0f6ffd430 217 Pfam PF14103 Domain of unknown function (DUF4276) 8 212 5.4E-56 T 28-03-2018 IPR025455 Protein of unknown function DUF4276 DDI_RS08535 65f6493430d55570388795b585e673a9 199 Pfam PF14065 Protein of unknown function (DUF4255) 52 190 4.2E-25 T 28-03-2018 IPR025351 Protein of unknown function DUF4255 DDI_RS11320 3e7ee9bbcafa670bd3ceafc2ad072e6a 98 Gene3D G3DSA:3.60.15.10 16 98 2.1E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS11320 3e7ee9bbcafa670bd3ceafc2ad072e6a 98 Pfam PF12706 Beta-lactamase superfamily domain 18 97 2.7E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS11320 3e7ee9bbcafa670bd3ceafc2ad072e6a 98 SUPERFAMILY SSF56281 16 97 1.22E-9 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS08070 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 3.1E-35 T 28-03-2018 DDI_RS08070 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DDI_RS08070 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold DDI_RS08070 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DDI_RS08070 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DDI_RS08070 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 28-03-2018 IPR022967 RNA-binding domain, S1 DDI_RS13180 a5edd0cfff7e90dc9b096082b8a49afe 205 Pfam PF16537 Type II secretion system protein B 112 170 2.7E-22 T 28-03-2018 IPR032389 Type II secretion system protein B DDI_RS11145 f0adaa1a7a957062f1eea4e252db3a7b 102 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 85 3.6E-21 T 28-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 DDI_RS11145 f0adaa1a7a957062f1eea4e252db3a7b 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.637 T 28-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 DDI_RS18690 aea9e051ff3144e844c6152139b9194d 233 Gene3D G3DSA:3.30.450.40 47 229 9.2E-9 T 28-03-2018 IPR029016 GAF domain-like DDI_RS18690 aea9e051ff3144e844c6152139b9194d 233 Pfam PF04340 Protein of unknown function, DUF484 11 230 3.1E-72 T 28-03-2018 IPR007435 Protein of unknown function DUF484 DDI_RS11155 9f0b25690166db1e9e83152ed06c082f 197 SUPERFAMILY SSF142695 3 173 9.29E-67 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 DDI_RS11155 9f0b25690166db1e9e83152ed06c082f 197 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 4.4E-92 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 DDI_RS11155 9f0b25690166db1e9e83152ed06c082f 197 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.124 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 DDI_RS11155 9f0b25690166db1e9e83152ed06c082f 197 Pfam PF00925 GTP cyclohydrolase II 5 170 1.7E-67 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 DDI_RS00200 03ce390bff8d92411fd1032c737c0b27 446 Gene3D G3DSA:3.30.2290.10 6 232 3.2E-59 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain DDI_RS00200 03ce390bff8d92411fd1032c737c0b27 446 SUPERFAMILY SSF111283 14 445 8.63E-127 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DDI_RS00200 03ce390bff8d92411fd1032c737c0b27 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 4.6E-59 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DDI_RS12815 b8f553ffb0f6d127f1a1309f1c61a0a6 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 8.3E-69 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 DDI_RS12815 b8f553ffb0f6d127f1a1309f1c61a0a6 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.521 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 DDI_RS12815 b8f553ffb0f6d127f1a1309f1c61a0a6 189 SUPERFAMILY SSF52507 2 188 3.66E-58 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DDI_RS12815 b8f553ffb0f6d127f1a1309f1c61a0a6 189 Pfam PF02441 Flavoprotein 2 165 7.0E-24 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DDI_RS12815 b8f553ffb0f6d127f1a1309f1c61a0a6 189 Gene3D G3DSA:3.40.50.1950 2 189 9.8E-53 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DDI_RS08370 baac24a3ebaf3a986c6f66276a68f3f1 439 Gene3D G3DSA:2.160.20.10 13 439 8.7E-59 T 28-03-2018 IPR012334 Pectin lyase fold DDI_RS08370 baac24a3ebaf3a986c6f66276a68f3f1 439 SUPERFAMILY SSF51126 15 438 9.95E-64 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor DDI_RS08370 baac24a3ebaf3a986c6f66276a68f3f1 439 Pfam PF13229 Right handed beta helix region 131 321 4.6E-10 T 28-03-2018 DDI_RS20700 421ecedc67ed83f18334c2ad4e2588e4 316 Pfam PF04227 Indigoidine synthase A like protein 16 304 7.0E-113 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DDI_RS20700 421ecedc67ed83f18334c2ad4e2588e4 316 Gene3D G3DSA:3.40.1790.10 6 310 8.2E-118 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DDI_RS20700 421ecedc67ed83f18334c2ad4e2588e4 316 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 308 40.722 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DDI_RS20700 421ecedc67ed83f18334c2ad4e2588e4 316 SUPERFAMILY SSF110581 9 306 8.24E-106 T 28-03-2018 DDI_RS11200 be10f348500f8f3b70d095573b1e377b 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.0E-9 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DDI_RS04660 3f4127e04e92d8b51947f15e6bca594c 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 4.2E-51 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS04660 3f4127e04e92d8b51947f15e6bca594c 336 Gene3D G3DSA:1.10.3470.10 26 331 1.2E-32 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS14430 cfbc6c015ba2111a99305d4b8300e9b7 433 Pfam PF02378 Phosphotransferase system, EIIC 30 346 2.7E-35 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDI_RS14430 cfbc6c015ba2111a99305d4b8300e9b7 433 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 422 6.6E-89 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DDI_RS14430 cfbc6c015ba2111a99305d4b8300e9b7 433 PIRSF PIRSF006351 1 431 3.0E-99 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DDI_RS10790 d1f28e92910c53450d8811fe966a5c3a 63 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.0E-21 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type DDI_RS11290 0d37193496d9698d2adc5aaff9f043aa 355 SUPERFAMILY SSF52266 142 326 1.67E-11 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS11290 0d37193496d9698d2adc5aaff9f043aa 355 Gene3D G3DSA:3.40.50.1110 142 355 3.7E-22 T 28-03-2018 DDI_RS11290 0d37193496d9698d2adc5aaff9f043aa 355 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 149 313 3.1E-9 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain DDI_RS19705 196c10c1507ca410d3fc5c6e0b315258 389 Gene3D G3DSA:1.20.1250.20 198 389 4.0E-16 T 28-03-2018 DDI_RS19705 196c10c1507ca410d3fc5c6e0b315258 389 Pfam PF07690 Major Facilitator Superfamily 22 263 8.5E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDI_RS19705 196c10c1507ca410d3fc5c6e0b315258 389 SUPERFAMILY SSF103473 14 386 3.01E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain DDI_RS19705 196c10c1507ca410d3fc5c6e0b315258 389 Gene3D G3DSA:1.20.1250.20 13 197 2.0E-17 T 28-03-2018 DDI_RS13820 c2cd4a39cd883ef67699a6292155d03d 204 PIRSF PIRSF039033 4 204 1.7E-61 T 28-03-2018 IPR028347 START domain-containing protein DDI_RS13820 c2cd4a39cd883ef67699a6292155d03d 204 Gene3D G3DSA:3.30.530.20 24 204 1.6E-35 T 28-03-2018 IPR023393 START-like domain DDI_RS13820 c2cd4a39cd883ef67699a6292155d03d 204 SUPERFAMILY SSF55961 23 201 6.56E-41 T 28-03-2018 DDI_RS13820 c2cd4a39cd883ef67699a6292155d03d 204 Pfam PF01852 START domain 24 203 2.1E-9 T 28-03-2018 IPR002913 START domain GO:0008289 DDI_RS16970 3f9ff6709e9f8132d01d87634e33a075 260 Pfam PF06738 Putative threonine/serine exporter 13 252 1.2E-66 T 28-03-2018 IPR010619 Putative threonine/serine exporter DDI_RS03230 b5f7b5931b7ed702a6b9350c520bc9ce 291 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 79 279 2.3E-28 T 28-03-2018 IPR003744 Queuosine precursor transporter DDI_RS03230 b5f7b5931b7ed702a6b9350c520bc9ce 291 Pfam PF02592 Putative vitamin uptake transporter 116 272 3.2E-39 T 28-03-2018 IPR003744 Queuosine precursor transporter DDI_RS16355 3b3e1608853f16f4e68b33b74d676292 99 Gene3D G3DSA:3.40.50.720 1 27 0.2 T 28-03-2018 DDI_RS16355 3b3e1608853f16f4e68b33b74d676292 99 Gene3D G3DSA:3.40.50.720 28 97 2.1E-5 T 28-03-2018 DDI_RS14545 68ed53570b1e16bf3da280dd4a47d2cb 256 PIRSF PIRSF006648 11 253 2.3E-21 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 DDI_RS14545 68ed53570b1e16bf3da280dd4a47d2cb 256 Pfam PF01061 ABC-2 type transporter 9 218 5.8E-38 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DDI_RS14545 68ed53570b1e16bf3da280dd4a47d2cb 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.1E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 DDI_RS14545 68ed53570b1e16bf3da280dd4a47d2cb 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.1E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 DDI_RS14545 68ed53570b1e16bf3da280dd4a47d2cb 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.1E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 DDI_RS14545 68ed53570b1e16bf3da280dd4a47d2cb 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 1.1E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 DDI_RS06140 afd959a85faafd9efe11cd28f1eb5828 258 Gene3D G3DSA:3.20.20.60 1 257 3.1E-40 T 28-03-2018 DDI_RS06140 afd959a85faafd9efe11cd28f1eb5828 258 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 25 235 4.0E-35 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DDI_RS06140 afd959a85faafd9efe11cd28f1eb5828 258 SUPERFAMILY SSF51621 1 251 6.63E-71 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 DDI_RS03330 2660ebd924ebbf39713b966d59e25941 241 SUPERFAMILY SSF50685 37 139 1.26E-12 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDI_RS03330 2660ebd924ebbf39713b966d59e25941 241 Gene3D G3DSA:2.60.40.760 153 223 1.3E-12 T 28-03-2018 IPR007117 Expansin, cellulose-binding-like domain DDI_RS03330 2660ebd924ebbf39713b966d59e25941 241 Gene3D G3DSA:2.40.40.10 26 152 2.3E-12 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDI_RS03330 2660ebd924ebbf39713b966d59e25941 241 SUPERFAMILY SSF49590 144 213 2.88E-7 T 28-03-2018 IPR007117 Expansin, cellulose-binding-like domain DDI_RS02420 3109d2a6802859cc7641522b85b1a36e 256 Pfam PF12686 Protein of unknown function (DUF3800) 5 185 2.7E-18 T 28-03-2018 IPR024524 Protein of unknown function DUF3800 DDI_RS19240 d1b42fa6f75d955014c18dd0fe058840 86 Pfam PF10956 Protein of unknown function (DUF2756) 5 84 1.5E-8 T 28-03-2018 IPR020158 Protein of unknown function DUF2756 DDI_RS08480 5253aa2ad5959a7a2786fdb0df0d1349 245 SUPERFAMILY SSF89550 3 241 7.06E-63 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DDI_RS08480 5253aa2ad5959a7a2786fdb0df0d1349 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.173 T 28-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 DDI_RS08480 5253aa2ad5959a7a2786fdb0df0d1349 245 Pfam PF02811 PHP domain 5 159 2.1E-8 T 28-03-2018 IPR004013 PHP domain GO:0003824 DDI_RS08480 5253aa2ad5959a7a2786fdb0df0d1349 245 Gene3D G3DSA:3.20.20.140 6 231 1.1E-36 T 28-03-2018 DDI_RS08480 5253aa2ad5959a7a2786fdb0df0d1349 245 SMART SM00481 4 78 5.0E-18 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DDI_RS04670 13b0ca72dc9cf6e03b8d2d6e534b21a1 331 Gene3D G3DSA:3.40.50.2300 137 331 5.0E-40 T 28-03-2018 DDI_RS04670 13b0ca72dc9cf6e03b8d2d6e534b21a1 331 SUPERFAMILY SSF53822 25 330 9.42E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I DDI_RS04670 13b0ca72dc9cf6e03b8d2d6e534b21a1 331 Pfam PF13407 Periplasmic binding protein domain 28 299 3.4E-63 T 28-03-2018 IPR025997 Periplasmic binding protein DDI_RS04670 13b0ca72dc9cf6e03b8d2d6e534b21a1 331 Gene3D G3DSA:3.40.50.2300 19 136 2.4E-17 T 28-03-2018 DDI_RS06045 d1018c55216af093f6d0e8e8db0f757a 249 Gene3D G3DSA:3.60.15.10 1 249 3.5E-56 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS06045 d1018c55216af093f6d0e8e8db0f757a 249 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 245 2.3E-109 T 28-03-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDI_RS06045 d1018c55216af093f6d0e8e8db0f757a 249 Pfam PF12706 Beta-lactamase superfamily domain 51 220 7.0E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS06045 d1018c55216af093f6d0e8e8db0f757a 249 SMART SM00849 36 220 1.5E-4 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS06045 d1018c55216af093f6d0e8e8db0f757a 249 SUPERFAMILY SSF56281 1 248 2.03E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase DDI_RS02645 ac79231946c4617e3b22bc446090d473 257 SUPERFAMILY SSF52540 1 229 1.46E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS02645 ac79231946c4617e3b22bc446090d473 257 Pfam PF00005 ABC transporter 22 167 8.0E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS02645 ac79231946c4617e3b22bc446090d473 257 SMART SM00382 30 216 2.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS02645 ac79231946c4617e3b22bc446090d473 257 Gene3D G3DSA:3.40.50.300 1 256 2.0E-70 T 28-03-2018 DDI_RS02645 ac79231946c4617e3b22bc446090d473 257 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS05475 225e0292a3c7ffcb6927b60119a40cb6 714 Gene3D G3DSA:2.40.160.20 524 678 0.19 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS05475 225e0292a3c7ffcb6927b60119a40cb6 714 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 47 711 6.1E-269 T 28-03-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH DDI_RS05475 225e0292a3c7ffcb6927b60119a40cb6 714 Gene3D G3DSA:2.40.160.20 165 523 3.7E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 DDI_RS10780 14b0cb48030ce14bdfce61a2cf46cbe4 165 Pfam PF06995 Phage P2 GpU 7 128 2.2E-39 T 28-03-2018 IPR009734 Myoviridae, GpU DDI_RS10780 14b0cb48030ce14bdfce61a2cf46cbe4 165 PIRSF PIRSF029208 1 150 6.1E-54 T 28-03-2018 IPR016912 Bacteriophage P2, GpU DDI_RS11210 116899357a95155be9b8e9bb3738fb2e 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 5.5E-18 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 DDI_RS16045 507eea00c5e0c0f2945a25af3b02307e 370 Pfam PF04865 Baseplate J-like protein 71 329 6.4E-69 T 28-03-2018 IPR006949 Baseplate protein J-like DDI_RS16045 507eea00c5e0c0f2945a25af3b02307e 370 PIRSF PIRSF020481 1 369 1.3E-90 T 28-03-2018 IPR014507 Baseplate assembly protein J, predicted DDI_RS00370 44b025b6b2d162526ca1095e1a69c320 217 SUPERFAMILY SSF52317 1 215 5.96E-62 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS00370 44b025b6b2d162526ca1095e1a69c320 217 PIRSF PIRSF006320 1 216 1.0E-105 T 28-03-2018 IPR026041 Glyoxalase ElbB DDI_RS00370 44b025b6b2d162526ca1095e1a69c320 217 Gene3D G3DSA:3.40.50.880 2 217 8.0E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like DDI_RS15180 50286b4e98eaf96b15bdd4b83a593d6a 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 106 1.6E-25 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS15180 50286b4e98eaf96b15bdd4b83a593d6a 217 SUPERFAMILY SSF161098 12 203 1.83E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15180 50286b4e98eaf96b15bdd4b83a593d6a 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 211 3.3E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS15180 50286b4e98eaf96b15bdd4b83a593d6a 217 Gene3D G3DSA:1.10.3720.10 2 217 9.0E-37 T 28-03-2018 DDI_RS03045 3cca7074ad75775ca5dfbd7d991e25d6 169 Gene3D G3DSA:2.70.70.10 9 169 5.1E-58 T 28-03-2018 DDI_RS03045 3cca7074ad75775ca5dfbd7d991e25d6 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.1E-51 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS03045 3cca7074ad75775ca5dfbd7d991e25d6 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.1E-49 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS03045 3cca7074ad75775ca5dfbd7d991e25d6 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDI_RS03045 3cca7074ad75775ca5dfbd7d991e25d6 169 SUPERFAMILY SSF51261 11 167 4.19E-56 T 28-03-2018 IPR011055 Duplicated hybrid motif DDI_RS20730 08c77e60519c2d8f3ed2a0a507381d89 451 Pfam PF01554 MatE 247 403 2.1E-9 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDI_RS06710 77a6d34ad37521a05c4ec2a2fb8c82e2 239 Pfam PF02754 Cysteine-rich domain 133 216 2.6E-14 T 28-03-2018 IPR004017 Cysteine-rich domain DDI_RS06710 77a6d34ad37521a05c4ec2a2fb8c82e2 239 Pfam PF02754 Cysteine-rich domain 3 85 2.0E-13 T 28-03-2018 IPR004017 Cysteine-rich domain DDI_RS01930 71dc6ed76f1dd447df2617b5503f3367 177 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 117 2.4E-43 T 28-03-2018 IPR006531 Gp5 N-terminal DDI_RS01930 71dc6ed76f1dd447df2617b5503f3367 177 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 141 7.4E-47 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 DDI_RS08395 cad600735b690a5cf1bc071b429ef02d 240 Pfam PF04288 MukE-like family 12 233 8.7E-122 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 DDI_RS08395 cad600735b690a5cf1bc071b429ef02d 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 49.119 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 DDI_RS05840 79edb0e46838007244231df97e795d1c 333 Pfam PF04326 Putative DNA-binding domain 17 131 1.3E-8 T 28-03-2018 IPR007421 Schlafen, AAA domain GO:0005524 DDI_RS08130 99b4c52bfcec3992bbe3e1d17a6f6a10 214 Gene3D G3DSA:3.40.30.10 1 214 1.5E-24 T 28-03-2018 DDI_RS08130 99b4c52bfcec3992bbe3e1d17a6f6a10 214 SUPERFAMILY SSF52833 3 212 3.68E-28 T 28-03-2018 IPR012336 Thioredoxin-like fold DDI_RS16080 7cb8ff261b92bdd27ebf4f1c0176d915 823 Pfam PF10145 Phage-related minor tail protein 158 341 3.0E-15 T 28-03-2018 IPR010090 Phage tail tape measure protein DDI_RS16080 7cb8ff261b92bdd27ebf4f1c0176d915 823 Gene3D G3DSA:1.20.5.1230 11 717 5.1E-5 T 28-03-2018 DDI_RS16080 7cb8ff261b92bdd27ebf4f1c0176d915 823 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 393 488 1.3E-10 T 28-03-2018 IPR010090 Phage tail tape measure protein DDI_RS15700 b740865174984cf917e80243f7f6b619 123 Pfam PF10697 Protein of unknown function (DUF2502) 27 67 1.3E-13 T 28-03-2018 IPR019638 Protein of unknown function DUF2502 DDI_RS05650 487ace12d2d6fd7eb02d53e48ac484cf 200 Pfam PF01810 LysE type translocator 17 195 1.7E-13 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS01205 56e36197d269c165bbdee5e0c3e970c9 109 SUPERFAMILY SSF102829 6 94 6.28E-25 T 28-03-2018 IPR007838 Cell division protein ZapA-like DDI_RS01205 56e36197d269c165bbdee5e0c3e970c9 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 34.728 T 28-03-2018 IPR023771 Cell division protein ZapA, eubacteria DDI_RS01205 56e36197d269c165bbdee5e0c3e970c9 109 Pfam PF05164 Cell division protein ZapA 6 90 1.4E-19 T 28-03-2018 IPR007838 Cell division protein ZapA-like DDI_RS11670 e3824b56b17c6f662dc9488d8458122a 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 7.5E-12 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DDI_RS18320 ac02b3bab4f030a7aa043a4626ca175b 456 Gene3D G3DSA:3.90.1150.10 332 445 4.1E-5 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 DDI_RS18320 ac02b3bab4f030a7aa043a4626ca175b 456 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 79 369 5.2E-13 T 28-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 DDI_RS18320 ac02b3bab4f030a7aa043a4626ca175b 456 Gene3D G3DSA:3.40.640.10 58 331 9.2E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 DDI_RS18320 ac02b3bab4f030a7aa043a4626ca175b 456 SUPERFAMILY SSF53383 77 443 1.58E-49 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDI_RS02195 0c553b6d497644e2bed069df94b235b8 174 SUPERFAMILY SSF55718 43 137 3.77E-21 T 28-03-2018 IPR003033 SCP2 sterol-binding domain DDI_RS02195 0c553b6d497644e2bed069df94b235b8 174 PIRSF PIRSF025550 1 172 4.2E-76 T 28-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT DDI_RS02195 0c553b6d497644e2bed069df94b235b8 174 Gene3D G3DSA:3.30.1050.10 15 140 5.2E-17 T 28-03-2018 IPR003033 SCP2 sterol-binding domain DDI_RS02195 0c553b6d497644e2bed069df94b235b8 174 Pfam PF02036 SCP-2 sterol transfer family 45 133 2.3E-18 T 28-03-2018 IPR003033 SCP2 sterol-binding domain DDI_RS06590 c501b544ce0e2133c2869712b07712e9 490 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 15 488 1.4E-212 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DDI_RS06590 c501b544ce0e2133c2869712b07712e9 490 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 487 3.3E-178 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DDI_RS12340 1d2aee803baeee5ad0f392d6d1eb4773 83 Gene3D G3DSA:1.10.1200.10 1 83 1.4E-8 T 28-03-2018 DDI_RS12340 1d2aee803baeee5ad0f392d6d1eb4773 83 SUPERFAMILY SSF47336 5 81 1.3E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain DDI_RS10930 26e1cc713c3238f939e39d096980af0a 92 Pfam PF03891 Domain of unknown function (DUF333) 41 87 7.0E-15 T 28-03-2018 IPR005590 Protein of unknown function DUF333 DDI_RS21000 00b4f4c6a7611c8cb0f6e5445a2eddbc 322 SUPERFAMILY SSF56235 1 154 1.03E-99 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS21000 00b4f4c6a7611c8cb0f6e5445a2eddbc 322 SUPERFAMILY SSF56235 183 314 1.03E-99 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS21000 00b4f4c6a7611c8cb0f6e5445a2eddbc 322 Gene3D G3DSA:3.60.20.30 186 322 1.2E-47 T 28-03-2018 DDI_RS21000 00b4f4c6a7611c8cb0f6e5445a2eddbc 322 Pfam PF01112 Asparaginase 3 317 4.3E-124 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 DDI_RS05205 febc779e88e9f56515fc81b9acb120dd 238 Pfam PF04474 Protein of unknown function (DUF554) 2 230 6.1E-61 T 28-03-2018 IPR007563 Protein of unknown function DUF554 DDI_RS14905 24abedcfdf93264b922dbbd9b02497a1 67 Pfam PF04328 Selenoprotein, putative 5 67 2.8E-28 T 28-03-2018 IPR007423 Selenoprotein, putative DDI_RS20405 64ebad6397ba63884ec83bd5a2f1af6a 467 PIRSF PIRSF500217 1 467 1.3E-114 T 28-03-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 DDI_RS20405 64ebad6397ba63884ec83bd5a2f1af6a 467 PIRSF PIRSF016636 1 467 4.9E-115 T 28-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB DDI_RS20405 64ebad6397ba63884ec83bd5a2f1af6a 467 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 36 373 1.1E-18 T 28-03-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT DDI_RS08320 599f5b681f9e032202e1454a7d3f329b 455 PIRSF PIRSF006060 1 452 1.1E-72 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS08320 599f5b681f9e032202e1454a7d3f329b 455 Pfam PF13520 Amino acid permease 51 419 7.7E-34 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS09905 0f0760ae4bb1372ba51f1cbb5785196a 182 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 179 1.0E-72 T 28-03-2018 DDI_RS09905 0f0760ae4bb1372ba51f1cbb5785196a 182 Pfam PF14002 YniB-like protein 15 179 1.8E-77 T 28-03-2018 IPR025229 YniB-like protein DDI_RS17910 6f9a5108a65df3da9602e38e5875ffc1 189 SUPERFAMILY SSF55821 4 186 2.44E-56 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain DDI_RS17910 6f9a5108a65df3da9602e38e5875ffc1 189 Pfam PF01300 Telomere recombination 15 189 1.1E-44 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 DDI_RS17910 6f9a5108a65df3da9602e38e5875ffc1 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 6 187 42.57 T 28-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 DDI_RS17910 6f9a5108a65df3da9602e38e5875ffc1 189 Gene3D G3DSA:3.90.870.10 1 187 6.2E-54 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain DDI_RS20200 78608fc552f0f9faea68ebbd57e27e99 445 PIRSF PIRSF005353 5 444 1.7E-175 T 28-03-2018 IPR026033 Purine permease PbuG-like DDI_RS20200 78608fc552f0f9faea68ebbd57e27e99 445 Pfam PF00860 Permease family 31 404 8.2E-44 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 DDI_RS14405 e6dfe50395cfeec121659d90969be8a3 425 Gene3D G3DSA:2.40.170.10 31 425 1.1E-44 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS14405 e6dfe50395cfeec121659d90969be8a3 425 SUPERFAMILY SSF56935 33 425 6.71E-13 T 28-03-2018 DDI_RS14405 e6dfe50395cfeec121659d90969be8a3 425 Pfam PF02264 LamB porin 98 423 2.5E-16 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 DDI_RS08490 0ad1311340f7b400b21729cb22cf3d30 187 Pfam PF07273 Protein of unknown function (DUF1439) 29 180 1.5E-57 T 28-03-2018 IPR010835 Protein of unknown function DUF1439 DDI_RS10850 24fa862eb1879f71b7ac58b86f622083 366 Pfam PF01699 Sodium/calcium exchanger protein 223 364 1.1E-10 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DDI_RS10850 24fa862eb1879f71b7ac58b86f622083 366 Pfam PF01699 Sodium/calcium exchanger protein 42 190 3.4E-13 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DDI_RS10850 24fa862eb1879f71b7ac58b86f622083 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 4 364 2.1E-107 T 28-03-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 DDI_RS08550 664f2d661e353e10d5a71e352f23c13d 154 Pfam PF06841 T4-like virus tail tube protein gp19 16 148 2.6E-40 T 28-03-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 DDI_RS08550 664f2d661e353e10d5a71e352f23c13d 154 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 13 149 8.2E-34 T 28-03-2018 IPR011747 Conserved hypothetical protein CHP02241 DDI_RS12035 253a728991a2e2c46970cc028052e455 138 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 36 104 3.0E-24 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DDI_RS12035 253a728991a2e2c46970cc028052e455 138 Pfam PF04347 Flagellar biosynthesis protein, FliO 48 130 2.7E-21 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DDI_RS10265 0f980ec310e44bd15b6ec359956d8740 75 Pfam PF06266 HrpF protein 1 75 1.5E-36 T 28-03-2018 IPR009371 Type III secretion protein HrpF DDI_RS14945 ffe868e1a8d28156446c93290995509f 275 SUPERFAMILY SSF161098 69 256 1.11E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS14945 ffe868e1a8d28156446c93290995509f 275 Gene3D G3DSA:1.10.3720.10 4 264 6.0E-39 T 28-03-2018 DDI_RS14945 ffe868e1a8d28156446c93290995509f 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 273 3.0E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09970 8790ab768e3a987976d5df519d136c98 109 Gene3D G3DSA:3.30.1450.10 23 99 6.5E-5 T 28-03-2018 DDI_RS09970 8790ab768e3a987976d5df519d136c98 109 Pfam PF04355 SmpA / OmlA family 28 95 4.7E-13 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 DDI_RS02050 779de616bda26b35566f7466df0b3ef3 128 Gene3D G3DSA:1.10.10.10 3 69 7.1E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02050 779de616bda26b35566f7466df0b3ef3 128 Pfam PF02316 Mu DNA-binding domain 10 67 2.3E-13 T 28-03-2018 IPR003314 Mu-type HTH domain GO:0003677 DDI_RS02050 779de616bda26b35566f7466df0b3ef3 128 SUPERFAMILY SSF46955 3 69 2.38E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain DDI_RS16060 b4ce4c8cc3a4746aee1a5a1e4a2ef9cb 194 Gene3D G3DSA:2.40.50.260 4 91 8.6E-7 T 28-03-2018 DDI_RS16060 b4ce4c8cc3a4746aee1a5a1e4a2ef9cb 194 Pfam PF04717 Type VI secretion system, phage-baseplate injector 1 105 2.3E-17 T 28-03-2018 IPR006531 Gp5 N-terminal DDI_RS16060 b4ce4c8cc3a4746aee1a5a1e4a2ef9cb 194 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 1 194 9.2E-34 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 DDI_RS07070 0da27e38831a6f4ff8d5be1aac2033eb 115 Pfam PF11367 Protein of unknown function (DUF3168) 28 89 1.6E-6 T 28-03-2018 IPR021508 Tail completion protein DDI_RS01550 ceb43cf9b6599594b191373013159193 167 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 1.0E-31 T 28-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 DDI_RS12935 5444016b4c6c8ade29ad5cbee57e2059 187 Pfam PF04315 Elongation factor P hydroxylase 19 177 1.7E-81 T 28-03-2018 IPR007411 Elongation factor P hydroxylase DDI_RS13750 7c2c898aa193f3ebdcff5d91e09edf07 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 9.3E-27 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS13750 7c2c898aa193f3ebdcff5d91e09edf07 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 9.3E-27 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS13750 7c2c898aa193f3ebdcff5d91e09edf07 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 9.3E-27 T 28-03-2018 IPR003004 GspF/PilC family DDI_RS13750 7c2c898aa193f3ebdcff5d91e09edf07 401 Pfam PF00482 Type II secretion system (T2SS), protein F 69 191 7.0E-28 T 28-03-2018 IPR018076 Type II secretion system F domain DDI_RS13750 7c2c898aa193f3ebdcff5d91e09edf07 401 Pfam PF00482 Type II secretion system (T2SS), protein F 272 391 1.1E-17 T 28-03-2018 IPR018076 Type II secretion system F domain DDI_RS13735 2632d5309b85036386b378ea7342b59b 162 Pfam PF11356 Type II secretion system protein C 54 159 1.9E-10 T 28-03-2018 IPR024961 Type II secretion system protein C, N-terminal DDI_RS16280 1cf7b7028eca28d33f44b9247df5bf35 204 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 18 193 1.1E-31 T 28-03-2018 IPR003740 Uncharacterised membrane protein YitT DDI_RS02565 dfed13d481ce4d92d23857941d410d2e 296 Gene3D G3DSA:1.10.3720.10 57 293 1.0E-41 T 28-03-2018 DDI_RS02565 dfed13d481ce4d92d23857941d410d2e 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 283 2.3E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS02565 dfed13d481ce4d92d23857941d410d2e 296 Gene3D G3DSA:1.20.58.370 1 36 8.3E-5 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain DDI_RS02565 dfed13d481ce4d92d23857941d410d2e 296 SUPERFAMILY SSF161098 49 283 3.66E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS19035 61fb2bbf63bcb81f05e39fae6ef549fc 218 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 7 216 50.928 T 28-03-2018 IPR023764 Transcriptional repressor HTH, FabR DDI_RS19035 61fb2bbf63bcb81f05e39fae6ef549fc 218 Gene3D G3DSA:1.10.260.40 44 144 3.3E-11 T 28-03-2018 DDI_RS19035 61fb2bbf63bcb81f05e39fae6ef549fc 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 64 3.3E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDI_RS19035 61fb2bbf63bcb81f05e39fae6ef549fc 218 SUPERFAMILY SSF46689 7 83 4.73E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 DDI_RS19035 61fb2bbf63bcb81f05e39fae6ef549fc 218 Gene3D G3DSA:1.10.10.60 10 43 7.4E-14 T 28-03-2018 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 Gene3D G3DSA:1.10.1660.10 56 136 1.5E-16 T 28-03-2018 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 SMART SM00422 1 70 4.9E-25 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 Gene3D G3DSA:1.10.1660.10 1 55 7.8E-21 T 28-03-2018 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 SUPERFAMILY SSF46955 1 126 1.58E-34 T 28-03-2018 IPR009061 Putative DNA-binding domain DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.0E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.0E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.0E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.4E-57 T 28-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 DDI_RS04500 1988e7c6e8007a4284ee9f91b7fa1a1e 140 Pfam PF13411 MerR HTH family regulatory protein 1 67 5.0E-18 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDI_RS02460 4684bc1939c426add5e36218b4083788 165 SUPERFAMILY SSF54060 36 105 4.06E-22 T 28-03-2018 DDI_RS02460 4684bc1939c426add5e36218b4083788 165 Pfam PF13392 HNH endonuclease 56 100 9.6E-19 T 28-03-2018 IPR003615 HNH nuclease DDI_RS02460 4684bc1939c426add5e36218b4083788 165 Gene3D G3DSA:3.90.75.10 10 154 5.4E-8 T 28-03-2018 DDI_RS06345 4cbf1a029709de861da799b0143052b5 232 Gene3D G3DSA:2.60.120.200 28 232 2.1E-21 T 28-03-2018 DDI_RS00520 58df7ea76910962941c72274defe6f31 104 Gene3D G3DSA:3.30.70.100 5 101 6.0E-6 T 28-03-2018 DDI_RS00520 58df7ea76910962941c72274defe6f31 104 SUPERFAMILY SSF54909 1 103 1.76E-37 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel DDI_RS00520 58df7ea76910962941c72274defe6f31 104 Pfam PF05336 L-rhamnose mutarotase 3 103 1.6E-28 T 28-03-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 DDI_RS00520 58df7ea76910962941c72274defe6f31 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 2.4E-50 T 28-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 DDI_RS00520 58df7ea76910962941c72274defe6f31 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.018 T 28-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 DDI_RS06155 f74d4105908a5f50c98029765d846a4c 305 SUPERFAMILY SSF53807 35 296 5.89E-55 T 28-03-2018 DDI_RS06155 f74d4105908a5f50c98029765d846a4c 305 Gene3D G3DSA:3.40.50.1980 142 298 1.2E-24 T 28-03-2018 DDI_RS06155 f74d4105908a5f50c98029765d846a4c 305 Gene3D G3DSA:3.40.50.1980 34 141 8.1E-23 T 28-03-2018 DDI_RS06155 f74d4105908a5f50c98029765d846a4c 305 Pfam PF01497 Periplasmic binding protein 38 273 2.5E-20 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 DDI_RS16310 1e43a48def956f0d413730a9ed469506 445 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 59 424 6.0E-137 T 28-03-2018 IPR013397 CRISPR-associated protein Csy1 DDI_RS16310 1e43a48def956f0d413730a9ed469506 445 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 59 434 2.9E-151 T 28-03-2018 IPR013397 CRISPR-associated protein Csy1 DDI_RS14885 1c5e41bf94901c8515f67adc01d9e63a 474 Pfam PF02666 Phosphatidylserine decarboxylase 239 441 1.5E-27 T 28-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DDI_RS14885 1c5e41bf94901c8515f67adc01d9e63a 474 Pfam PF12588 Phophatidylserine decarboxylase 74 218 8.4E-34 T 28-03-2018 IPR022237 Phophatidylserine decarboxylase DDI_RS06985 fdddd1297ebb5900ac90e7f61fc998bd 92 Gene3D G3DSA:1.10.3100.10 1 90 5.6E-18 T 28-03-2018 IPR027910 YdiL-like domain DDI_RS06985 fdddd1297ebb5900ac90e7f61fc998bd 92 Pfam PF12844 Helix-turn-helix domain 4 69 1.2E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS06985 fdddd1297ebb5900ac90e7f61fc998bd 92 SMART SM00530 5 64 3.1E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS06985 fdddd1297ebb5900ac90e7f61fc998bd 92 SUPERFAMILY SSF47413 2 70 2.95E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS12800 1e54189a9ae5c194bf6329ebe265404b 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 228 9.3E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12800 1e54189a9ae5c194bf6329ebe265404b 238 SUPERFAMILY SSF161098 17 220 4.45E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12800 1e54189a9ae5c194bf6329ebe265404b 238 Gene3D G3DSA:1.10.3720.10 3 233 7.4E-32 T 28-03-2018 DDI_RS12800 1e54189a9ae5c194bf6329ebe265404b 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 1.4E-11 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS13955 cb030f60040e921a6025295e6e87a8b4 446 Gene3D G3DSA:3.40.50.450 1 169 2.4E-15 T 28-03-2018 DDI_RS00840 3178f334fcbca79c49790cd3343e94c9 67 Gene3D G3DSA:1.10.10.10 8 67 8.8E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS00840 3178f334fcbca79c49790cd3343e94c9 67 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 55 9.7E-22 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA DDI_RS10710 ffe0ab060a745ff9f64496b1a1a7ae43 203 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 142 5.2E-53 T 28-03-2018 IPR006521 Tail protein I DDI_RS10710 ffe0ab060a745ff9f64496b1a1a7ae43 203 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 143 3.0E-61 T 28-03-2018 IPR006521 Tail protein I DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 Gene3D G3DSA:3.40.50.300 263 491 4.8E-34 T 28-03-2018 DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 SMART SM00382 33 257 1.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 SMART SM00382 284 480 1.3E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 Pfam PF00005 ABC transporter 275 429 2.1E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 Pfam PF00005 ABC transporter 24 175 1.7E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 SUPERFAMILY SSF52540 11 230 1.01E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 SUPERFAMILY SSF52540 271 485 4.96E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 Gene3D G3DSA:3.40.50.300 2 239 5.2E-51 T 28-03-2018 DDI_RS07810 2bd46f1a4ec238ef9da26e3dab32e58e 503 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDI_RS16110 f2560d8b06f7314174e09b2a45670a80 473 Pfam PF17482 Phage tail sheath C-terminal domain 361 460 3.0E-14 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain DDI_RS16110 f2560d8b06f7314174e09b2a45670a80 473 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 178 353 9.6E-30 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain DDI_RS13670 a85ee31870cf8e670eb1af56f03ea284 135 Pfam PF06146 Phosphate-starvation-inducible E 58 122 4.6E-14 T 28-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like DDI_RS13670 a85ee31870cf8e670eb1af56f03ea284 135 PIRSF PIRSF029598 2 135 2.1E-46 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 DDI_RS13670 a85ee31870cf8e670eb1af56f03ea284 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 24.267 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 DDI_RS15265 65fe98afebba151580484f305329d618 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 105 3.7E-17 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD DDI_RS17590 d947087b31caa343990e389126e12d61 156 Pfam PF07804 HipA-like C-terminal domain 11 110 1.9E-15 T 28-03-2018 IPR012893 HipA-like, C-terminal DDI_RS16620 0c607c58689ff2fae598d113ce9ead44 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 4.0E-157 T 28-03-2018 IPR031347 Protein AmpE DDI_RS09105 97b502f7309d75181539b31db1cbe2cb 243 Gene3D G3DSA:2.40.160.40 22 243 1.7E-32 T 28-03-2018 DDI_RS09105 97b502f7309d75181539b31db1cbe2cb 243 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 243 3.0E-72 T 28-03-2018 IPR009331 Oligogalacturonate-specific porin DDI_RS09105 97b502f7309d75181539b31db1cbe2cb 243 SUPERFAMILY SSF56935 50 243 1.28E-11 T 28-03-2018 DDI_RS01920 35247f4ad5996a320e357e7a3e79d0ae 147 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 133 4.9E-33 T 28-03-2018 IPR006522 Phage virion morphogensis protein DDI_RS01920 35247f4ad5996a320e357e7a3e79d0ae 147 Pfam PF05069 Phage virion morphogenesis family 3 142 1.3E-36 T 28-03-2018 IPR006522 Phage virion morphogensis protein DDI_RS01920 35247f4ad5996a320e357e7a3e79d0ae 147 Gene3D G3DSA:1.10.287.100 2 40 1.2E-4 T 28-03-2018 DDI_RS20190 b3f628069e25aa36fd9bcbc11446c066 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 224 5.2E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20190 b3f628069e25aa36fd9bcbc11446c066 252 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 114 2.6E-16 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS20190 b3f628069e25aa36fd9bcbc11446c066 252 SUPERFAMILY SSF161098 21 212 2.09E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20190 b3f628069e25aa36fd9bcbc11446c066 252 Gene3D G3DSA:1.10.3720.10 3 229 5.6E-40 T 28-03-2018 DDI_RS19340 3d69f610777eb30c5f756a24ea5651e5 308 Gene3D G3DSA:1.10.3470.10 4 299 1.7E-50 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS19340 3d69f610777eb30c5f756a24ea5651e5 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 1.7E-64 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS16155 d96e39b1527221d71feebd465891c441 497 Pfam PF06074 Protein of unknown function (DUF935) 29 492 1.0E-130 T 28-03-2018 IPR009279 Protein of unknown function DUF935 DDI_RS01235 60e27ed54cd24ebd5899485150efb455 226 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 1.8E-70 T 28-03-2018 IPR019305 Uncharacterised protein family Smp DDI_RS08010 92667a8864060d7a4f2e36c1545c2135 223 SUPERFAMILY SSF161098 6 200 1.07E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS08010 92667a8864060d7a4f2e36c1545c2135 223 Gene3D G3DSA:1.10.3720.10 2 221 4.3E-30 T 28-03-2018 DDI_RS08010 92667a8864060d7a4f2e36c1545c2135 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.3E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 DDI_RS08010 92667a8864060d7a4f2e36c1545c2135 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 215 2.9E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS09595 5271e86d3ee84aa6e192834fb4dbc3e8 284 Pfam PF00793 DAHP synthetase I family 15 275 9.4E-66 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDI_RS09595 5271e86d3ee84aa6e192834fb4dbc3e8 284 SUPERFAMILY SSF51569 3 278 2.11E-103 T 28-03-2018 DDI_RS09595 5271e86d3ee84aa6e192834fb4dbc3e8 284 Gene3D G3DSA:3.20.20.70 17 279 5.5E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDI_RS09595 5271e86d3ee84aa6e192834fb4dbc3e8 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 5.5E-118 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDI_RS09595 5271e86d3ee84aa6e192834fb4dbc3e8 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.411 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDI_RS06940 f3126145c7e72c2a9a1264ee3e033119 91 Pfam PF04956 TrbC/VIRB2 family 5 87 8.9E-15 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 DDI_RS09350 4c7970e823d394bf088cd962d07e7203 156 Pfam PF08808 RES domain 3 148 1.2E-21 T 28-03-2018 IPR014914 RES domain DDI_RS09350 4c7970e823d394bf088cd962d07e7203 156 SMART SM00953 15 140 5.3E-23 T 28-03-2018 IPR014914 RES domain DDI_RS11855 171d9907df625f2328703b42ca0fc288 145 Pfam PF11162 Protein of unknown function (DUF2946) 13 143 2.3E-13 T 28-03-2018 IPR021333 Protein of unknown function DUF2946 DDI_RS17900 ff51fe1519d3d4172c5ed4aedcad782f 89 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 1.1E-22 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 DDI_RS17900 ff51fe1519d3d4172c5ed4aedcad782f 89 Gene3D G3DSA:3.30.160.140 5 83 6.1E-26 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 DDI_RS17900 ff51fe1519d3d4172c5ed4aedcad782f 89 SUPERFAMILY SSF160272 1 85 4.58E-29 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 DDI_RS15585 099283824d332a5cfcc85ce2065f63a4 73 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 2.4E-28 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor DDI_RS15585 099283824d332a5cfcc85ce2065f63a4 73 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 3.0E-21 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor DDI_RS17955 244dde5b0349b5810fb2c4cfee786187 67 Pfam PF03889 Domain of unknown function 9 45 2.6E-22 T 28-03-2018 IPR005589 Protein of unknown function DUF331 DDI_RS00755 8adb0d9d17004233d46d1a4a6d08cc80 467 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 462 3.1E-133 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 DDI_RS16530 3cc43aa24010107c332193cb84d1df9a 428 Pfam PF07005 Putative sugar-binding N-terminal domain 10 233 4.3E-56 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain DDI_RS16530 3cc43aa24010107c332193cb84d1df9a 428 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 247 415 1.0E-38 T 28-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain DDI_RS16530 3cc43aa24010107c332193cb84d1df9a 428 SUPERFAMILY SSF142764 10 422 3.4E-95 T 28-03-2018 DDI_RS16530 3cc43aa24010107c332193cb84d1df9a 428 Gene3D G3DSA:3.40.50.10840 9 240 1.6E-62 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain DDI_RS19335 e3496582eee93cea4b13a06841f626d5 424 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 3.0E-58 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 DDI_RS19335 e3496582eee93cea4b13a06841f626d5 424 Gene3D G3DSA:1.10.3470.10 39 403 1.8E-47 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like DDI_RS19335 e3496582eee93cea4b13a06841f626d5 424 Pfam PF11862 Domain of unknown function (DUF3382) 5 103 8.4E-25 T 28-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal DDI_RS03550 24104337ee7ce7cc22a0b41d421fa0b8 238 Pfam PF03741 Integral membrane protein TerC family 16 202 8.7E-54 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 DDI_RS12365 d6c775b05b20d87119de26058647c723 202 Pfam PF01810 LysE type translocator 19 196 2.7E-8 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS11010 2c33ff0aa9efa1a434dc42fd485dba84 160 Pfam PF06114 IrrE N-terminal-like domain 50 154 6.8E-24 T 28-03-2018 IPR010359 IrrE N-terminal-like domain DDI_RS00155 3875df55532aa813e9a40bba86cad3ba 1278 Pfam PF13502 AsmA-like C-terminal region 1017 1259 5.1E-62 T 28-03-2018 IPR032712 AsmA-like, C-terminal DDI_RS00155 3875df55532aa813e9a40bba86cad3ba 1278 Pfam PF13116 Protein of unknown function 505 787 3.5E-96 T 28-03-2018 IPR025263 Domain of unknown function DUF3971 DDI_RS00155 3875df55532aa813e9a40bba86cad3ba 1278 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1268 0.0 T 28-03-2018 IPR011836 Conserved hypothetical protein CHP02099 DDI_RS04415 bb735c7f4d9032f77d31f423010c3de6 122 PIRSF PIRSF016789 2 122 1.2E-45 T 28-03-2018 IPR007401 Protein of unknown function DUF454 DDI_RS04415 bb735c7f4d9032f77d31f423010c3de6 122 Pfam PF04304 Protein of unknown function (DUF454) 3 116 2.1E-37 T 28-03-2018 IPR007401 Protein of unknown function DUF454 DDI_RS09635 440cb6dd6bc39c8afdc55541a6535b47 91 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 4.0E-42 T 28-03-2018 IPR019698 Protein of unknown function DUF2583 DDI_RS03135 84f92c1d424979e62c84e7672a5793ce 217 Gene3D G3DSA:2.60.120.590 14 217 2.2E-51 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like DDI_RS03135 84f92c1d424979e62c84e7672a5793ce 217 SUPERFAMILY SSF51197 18 216 4.53E-59 T 28-03-2018 DDI_RS03135 84f92c1d424979e62c84e7672a5793ce 217 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 23 215 1.3E-58 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like DDI_RS03085 75d1394336d5e01170b6f49872b2673b 94 Pfam PF04380 Membrane fusogenic activity 1 78 7.5E-29 T 28-03-2018 IPR007475 Membrane fusogenic activity DDI_RS00835 0bfe90f7741828c4120e577c30b40857 178 Pfam PF10554 Ash protein family 14 113 3.8E-18 T 28-03-2018 IPR018880 Bacteriophage P4, Ash protein DDI_RS03530 ebd0b661b7c1455ab645cfbffb9dcd3a 238 Pfam PF11101 Protein of unknown function (DUF2884) 23 238 4.2E-48 T 28-03-2018 IPR021307 Protein of unknown function DUF2884 DDI_RS03595 cbd869978d9d72ee27b536230b2894ea 134 Pfam PF10713 Protein of unknown function (DUF2509) 2 130 1.2E-42 T 28-03-2018 IPR019652 Protein of unknown function DUF2509 DDI_RS05735 efed0f04da81036f3bf54f135b46f7dd 64 Gene3D G3DSA:1.10.10.10 6 61 4.9E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS05735 efed0f04da81036f3bf54f135b46f7dd 64 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 54 4.9E-24 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA DDI_RS01505 4274304ee3fa66f694ff1ca9630558bd 67 Pfam PF08681 Protein of unknown function (DUF1778) 18 58 5.8E-8 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 DDI_RS01505 4274304ee3fa66f694ff1ca9630558bd 67 Gene3D G3DSA:1.20.5.780 13 59 1.0E-8 T 28-03-2018 DDI_RS01505 4274304ee3fa66f694ff1ca9630558bd 67 SUPERFAMILY SSF47598 17 57 4.0E-5 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS03900 8853a02791a0599b3ed335eac1187320 222 Pfam PF07812 TfuA-like protein 52 168 1.3E-23 T 28-03-2018 IPR012924 TfuA-like, core DDI_RS09755 64898fab82a3a7e2f2327c8e8b87c49f 511 Pfam PF04293 SpoVR like protein 20 451 6.5E-177 T 28-03-2018 IPR007390 Sporulation stage V, protein R DDI_RS16190 18ac9701c2f427bbc71f29a87aa7d581 114 Pfam PF13272 Putative 2/3 transmembrane domain holin 15 114 3.6E-36 T 28-03-2018 IPR025140 Putative 2/3 transmembrane domain holin DDI_RS16125 dcb67fee31e0ea744f21f2c72e92f216 148 Pfam PF07030 Protein of unknown function (DUF1320) 2 132 1.3E-38 T 28-03-2018 IPR009752 Bacteriophage Mu, Gp36 DDI_RS02660 05c02014b7134111fa567a0f1a658f53 69 Gene3D G3DSA:1.10.260.40 2 69 5.1E-11 T 28-03-2018 DDI_RS02660 05c02014b7134111fa567a0f1a658f53 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 2.0E-21 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS02660 05c02014b7134111fa567a0f1a658f53 69 SUPERFAMILY SSF47413 1 68 3.38E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS02660 05c02014b7134111fa567a0f1a658f53 69 SMART SM00530 6 62 3.8E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDI_RS08780 ce71709d417f81dcc03c619d699ab35a 169 SUPERFAMILY SSF47240 1 160 3.42E-56 T 28-03-2018 IPR009078 Ferritin-like superfamily DDI_RS08780 ce71709d417f81dcc03c619d699ab35a 169 Pfam PF00210 Ferritin-like domain 7 143 2.3E-38 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DDI_RS08780 ce71709d417f81dcc03c619d699ab35a 169 Gene3D G3DSA:1.20.1260.10 1 162 3.5E-39 T 28-03-2018 IPR012347 Ferritin-related DDI_RS19440 01e845812b8b432252b9a2ad81686b12 344 PIRSF PIRSF015268 3 344 1.2E-149 T 28-03-2018 IPR011204 Virulence protein RhuM-like DDI_RS19440 01e845812b8b432252b9a2ad81686b12 344 Pfam PF13310 Virulence protein RhuM family 69 322 6.0E-115 T 28-03-2018 IPR011204 Virulence protein RhuM-like DDI_RS03080 b0723a179b7986cf4c897cf460093250 417 Pfam PF13520 Amino acid permease 11 405 2.1E-29 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS03080 b0723a179b7986cf4c897cf460093250 417 PIRSF PIRSF006060 1 409 2.5E-53 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS06640 8ca122c66ffbab42bd6872be99a5784d 187 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 26 187 4.2E-29 T 28-03-2018 IPR017738 Type VI secretion system-associated, VCA0118 DDI_RS06640 8ca122c66ffbab42bd6872be99a5784d 187 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 24 187 5.4E-50 T 28-03-2018 IPR017738 Type VI secretion system-associated, VCA0118 DDI_RS00055 68ffee50b5fb364eedac163c49ef090e 86 Pfam PF10554 Ash protein family 1 64 1.2E-9 T 28-03-2018 IPR018880 Bacteriophage P4, Ash protein DDI_RS19385 60c372ecf0d8cbe950ad47261ef89de5 107 Pfam PF08850 Domain of unknown function (DUF1820) 7 102 4.0E-38 T 28-03-2018 IPR014949 Protein of unknown function DUF1820 DDI_RS18820 f11efbb28eb6345183925e469431723f 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 2.4E-8 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DDI_RS18820 f11efbb28eb6345183925e469431723f 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.801 T 28-03-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 DDI_RS11035 25236f4b87fd7c9569cdc321bd7b2c0d 471 Pfam PF04317 YcjX-like family, DUF463 26 470 1.2E-187 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein DDI_RS11035 25236f4b87fd7c9569cdc321bd7b2c0d 471 PIRSF PIRSF019381 2 471 4.1E-214 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein DDI_RS11035 25236f4b87fd7c9569cdc321bd7b2c0d 471 Gene3D G3DSA:3.40.50.300 19 415 2.8E-15 T 28-03-2018 DDI_RS17050 e696d7b42ed7c0568af7e8d9c78c40f1 190 Pfam PF01184 GPR1/FUN34/yaaH family 3 179 8.0E-43 T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 DDI_RS08580 17029660ee9856f7d23c4de27c8f508d 1261 Pfam PF04865 Baseplate J-like protein 977 1140 2.5E-6 T 28-03-2018 IPR006949 Baseplate protein J-like DDI_RS00645 165b45a292bbd03f32b53140b45e46dc 244 Gene3D G3DSA:3.60.20.10 2 227 9.7E-39 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS00645 165b45a292bbd03f32b53140b45e46dc 244 PIRSF PIRSF009120 1 244 2.8E-108 T 28-03-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 DDI_RS00645 165b45a292bbd03f32b53140b45e46dc 244 SUPERFAMILY SSF56235 2 240 9.16E-36 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDI_RS00645 165b45a292bbd03f32b53140b45e46dc 244 Pfam PF00227 Proteasome subunit 4 185 3.0E-9 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDI_RS10730 d8f1846e22378731de7628bb8dde70e5 451 Pfam PF13449 Esterase-like activity of phytase 58 389 2.7E-53 T 28-03-2018 IPR027372 Phytase-like domain DDI_RS09955 ca7f12aea336d415060b89354500c97d 322 SUPERFAMILY SSF53474 67 311 6.54E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS09955 ca7f12aea336d415060b89354500c97d 322 Pfam PF07859 alpha/beta hydrolase fold 127 285 2.6E-13 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 DDI_RS09955 ca7f12aea336d415060b89354500c97d 322 Gene3D G3DSA:3.40.50.1820 39 322 2.6E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold DDI_RS05445 ffb6b2fba9b73e6189140640b032a8e6 298 SUPERFAMILY SSF53448 2 285 1.55E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05445 ffb6b2fba9b73e6189140640b032a8e6 298 Gene3D G3DSA:3.90.550.10 1 298 7.5E-43 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDI_RS05445 ffb6b2fba9b73e6189140640b032a8e6 298 Pfam PF00483 Nucleotidyl transferase 5 254 3.8E-16 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DDI_RS16480 03456d7954ab72cc44500d4102f7bb3c 826 Gene3D G3DSA:2.60.120.260 95 261 3.0E-9 T 28-03-2018 IPR008979 Galactose-binding domain-like DDI_RS16480 03456d7954ab72cc44500d4102f7bb3c 826 Gene3D G3DSA:1.50.10.20 445 812 5.2E-4 T 28-03-2018 DDI_RS17540 a80f3d9598319e3dc454caf026f70cb9 147 Pfam PF04319 NifZ domain 3 73 1.0E-28 T 28-03-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 DDI_RS06815 ae08f2c4ccc3df2de2332991da1dabbe 291 Pfam PF11185 Protein of unknown function (DUF2971) 113 202 1.3E-5 T 28-03-2018 IPR021352 Protein of unknown function DUF2971 DDI_RS05770 93eacb9e05d1ec13f403290e88bf25dc 90 Gene3D G3DSA:1.10.260.40 4 78 2.4E-17 T 28-03-2018 DDI_RS05770 93eacb9e05d1ec13f403290e88bf25dc 90 SUPERFAMILY SSF47413 7 76 4.94E-29 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 DDI_RS05770 93eacb9e05d1ec13f403290e88bf25dc 90 Pfam PF13693 Winged helix-turn-helix DNA-binding 11 84 2.2E-37 T 28-03-2018 DDI_RS08270 587caca09c8b783d02bbcbc6e95f8061 455 Pfam PF03390 2-hydroxycarboxylate transporter family 34 447 8.3E-138 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 DDI_RS08270 587caca09c8b783d02bbcbc6e95f8061 455 PIRSF PIRSF005348 14 454 3.5E-154 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 DDI_RS18965 ba366a2b92b1950f77b3cbb6b5660db8 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.5E-40 T 28-03-2018 IPR007335 Protein of unknown function DUF413 DDI_RS05310 9972e2609b04fb69f94ffea7a585e381 230 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 21 187 1.8E-16 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system DDI_RS20565 bc47d77d6c94592be5761dc58c13f7cb 211 Pfam PF09347 Domain of unknown function (DUF1989) 17 185 1.2E-64 T 28-03-2018 IPR018959 Domain of unknown function DUF1989 DDI_RS20565 bc47d77d6c94592be5761dc58c13f7cb 211 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 12 211 2.7E-101 T 28-03-2018 IPR017791 Urea carboxylase-associated protein 1 DDI_RS08955 8c0a4786ffbcdd93e54f7732188a4199 131 Pfam PF07383 Protein of unknown function (DUF1496) 72 128 4.0E-19 T 28-03-2018 IPR009971 Protein of unknown function DUF1496 DDI_RS10770 96f924f8da024af768ac5d4ff7db85fd 51 Pfam PF06528 Phage P2 GpE 13 49 2.1E-20 T 28-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 DDI_RS00620 3ee9fea4ac8707208e349565076c651f 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 259 7.2E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS00620 3ee9fea4ac8707208e349565076c651f 273 Gene3D G3DSA:1.10.3720.10 5 257 1.4E-34 T 28-03-2018 DDI_RS00620 3ee9fea4ac8707208e349565076c651f 273 SUPERFAMILY SSF161098 62 249 1.44E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS12680 73a25a3c5b06c687f3e15f712b8da804 183 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 158 6.0E-32 T 28-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS00720 f676f1d132055282cb311d7746b8b18a 143 Pfam PF01724 Domain of unknown function DUF29 5 141 1.8E-51 T 28-03-2018 IPR002636 Protein from unkown function DUF29 DDI_RS01875 17d4f018aec46530074ae8acf19660f8 277 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 8 277 6.1E-112 T 28-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 DDI_RS01160 377f0b4c0b4be2719aab2b5d57dedba9 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 277 4.9E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01160 377f0b4c0b4be2719aab2b5d57dedba9 279 SUPERFAMILY SSF161098 74 260 8.5E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01160 377f0b4c0b4be2719aab2b5d57dedba9 279 Gene3D G3DSA:1.10.3720.10 4 269 1.1E-38 T 28-03-2018 DDI_RS10270 fe34b8592813cae44045d60487452a6a 862 SUPERFAMILY SSF51556 735 822 1.3E-11 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS10270 fe34b8592813cae44045d60487452a6a 862 SUPERFAMILY SSF51556 469 561 1.3E-11 T 28-03-2018 IPR032466 Metal-dependent hydrolase DDI_RS10270 fe34b8592813cae44045d60487452a6a 862 Gene3D G3DSA:3.20.20.140 161 850 2.1E-37 T 28-03-2018 DDI_RS05345 b6e24eaa1555682369ab6effc677197f 604 Pfam PF13502 AsmA-like C-terminal region 352 537 2.8E-19 T 28-03-2018 IPR032712 AsmA-like, C-terminal DDI_RS05345 b6e24eaa1555682369ab6effc677197f 604 Pfam PF05170 AsmA family 4 121 5.5E-15 T 28-03-2018 IPR007844 AsmA DDI_RS10750 e008524c288fd9c5d2cffec543d19084 203 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 83 203 3.1E-29 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DDI_RS00970 5e2841cceb12cd8fc2277f54eaf47618 125 Gene3D G3DSA:3.40.1800.10 17 107 6.4E-7 T 28-03-2018 DDI_RS01085 5f66555e3b486f82b6fe0a0dbdd3db3b 60 SUPERFAMILY SSF47598 5 43 3.04E-5 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDI_RS01085 5f66555e3b486f82b6fe0a0dbdd3db3b 60 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 43 4.9E-9 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 DDI_RS01085 5f66555e3b486f82b6fe0a0dbdd3db3b 60 Gene3D G3DSA:1.10.1220.10 1 48 1.2E-12 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDI_RS03905 ad8f8aea6c2d854dde7b31ac02b55168 325 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 40 314 1.3E-32 T 28-03-2018 IPR003776 YcaO-like domain DDI_RS10355 bd53f91e9bae47bf9b3bf10d9f14b36e 159 Gene3D G3DSA:1.10.287.620 21 159 3.1E-4 T 28-03-2018 DDI_RS10765 a9f760f955634ac9da3e32bcdda24b83 96 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 12 90 2.4E-8 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative DDI_RS16955 719e8eba4055b8ee53c83fe4f68e4b21 356 Pfam PF01757 Acyltransferase family 4 329 3.9E-32 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 DDI_RS05050 52af68b60eb6d90b74fd98775fec3406 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 8 29 1.3E-8 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 DDI_RS05050 52af68b60eb6d90b74fd98775fec3406 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 8 29 5.4E-7 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 DDI_RS11045 ca8e4cd33d4f3639e8c78cc267505cf7 76 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 6 75 7.7E-29 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 DDI_RS11045 ca8e4cd33d4f3639e8c78cc267505cf7 76 Pfam PF06667 Phage shock protein B 5 75 7.3E-30 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 DDI_RS02845 72d76b2f86fa86c1780cfb48475bb93c 181 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 9 60 1.5E-8 T 28-03-2018 IPR025159 Transcriptional regulator, AbiEi antitoxin DDI_RS14375 0138405698ccba2cd97effe5683408b1 305 Pfam PF03547 Membrane transport protein 158 299 3.1E-13 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DDI_RS01975 f992c9ed28de87761fa532dc880a691d 39 Pfam PF06528 Phage P2 GpE 1 36 5.6E-19 T 28-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 DDI_RS15715 7282dbdfe3b8ffa5f12b25e884b60e7e 124 Pfam PF04343 Protein of unknown function, DUF488 9 114 6.4E-24 T 28-03-2018 IPR007438 Protein of unknown function DUF488 DDI_RS16040 a3e0210c1e6ffc869eea0cba4f437e8c 191 Pfam PF09684 Phage tail protein (Tail_P2_I) 15 161 1.3E-28 T 28-03-2018 IPR006521 Tail protein I DDI_RS21130 9ed22abceff714d69dee5a3973b7242c 402 Pfam PF04932 O-Antigen ligase 187 325 3.2E-20 T 28-03-2018 IPR007016 O-antigen ligase-related DDI_RS16165 b5bdb7576a2e5fe33699dc0cdd257c10 182 Pfam PF11985 Protein of unknown function (DUF3486) 1 179 3.1E-51 T 28-03-2018 IPR021874 Bacteriophage Mu, Gp27 DDI_RS01630 c901c4a1e322a680b7a356986b830b2e 115 Hamap MF_00904 Modulator protein MzrA [mzrA]. 1 115 25.598 T 28-03-2018 IPR026574 Modulator protein MzrA DDI_RS01630 c901c4a1e322a680b7a356986b830b2e 115 Pfam PF13721 SecD export protein N-terminal TM region 10 103 8.2E-16 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain DDI_RS05405 7162c54437bbb738f3f30724e19cbad0 479 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 322 463 2.3E-8 T 28-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DDI_RS05405 7162c54437bbb738f3f30724e19cbad0 479 Pfam PF13440 Polysaccharide biosynthesis protein 27 317 1.4E-83 T 28-03-2018 DDI_RS01845 cc4680696be76597ca0c86d1ceb54973 685 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 135 457 1.1E-112 T 28-03-2018 IPR008766 Replication gene A protein GO:0006260 DDI_RS02850 02cc36197c31f72938089a9335efd976 305 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 36 279 1.5E-31 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system DDI_RS19490 29fe89cddcfd05a5de6a7db4f8ae3614 200 Pfam PF17037 Cellulose biosynthesis protein BcsO 1 200 6.1E-91 T 28-03-2018 IPR031484 Cellulose biosynthesis protein BcsO DDI_RS04405 6226561f9e29322b38e2445e92d39071 54 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 3.6E-24 T 28-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related DDI_RS02890 f694dab100468ae0f88c58f44d5278c9 289 Pfam PF13289 SIR2-like domain 116 235 2.6E-17 T 28-03-2018 DDI_RS06860 0dd69acf43c164b14f2d48e25439ce10 191 Gene3D G3DSA:3.40.1800.10 1 63 5.5E-4 T 28-03-2018 DDI_RS15080 53f63c8006250bc84debd9ed6eaed0fa 204 Pfam PF13689 Domain of unknown function (DUF4154) 67 201 4.1E-28 T 28-03-2018 IPR025293 Protein of unknown function DUF4154 DDI_RS02355 7514181959c27a823d3d80e111639e82 216 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 215 8.7E-72 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 DDI_RS02355 7514181959c27a823d3d80e111639e82 216 Pfam PF03006 Haemolysin-III related 11 208 9.8E-39 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 DDI_RS18250 708b8f128bc0e7c720cde61a789605be 201 Pfam PF01810 LysE type translocator 17 191 3.5E-15 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDI_RS08775 8349445ba6a6a0eea1abba20540f9ae0 300 Pfam PF05425 Copper resistance protein D 196 293 1.0E-17 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 DDI_RS02315 bb67c7df25c9db68e7907ee8c123d14e 94 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 22 78 2.0E-7 T 28-03-2018 IPR009885 Protein of unknown function DUF1435 DDI_RS02315 bb67c7df25c9db68e7907ee8c123d14e 94 Pfam PF07256 Protein of unknown function (DUF1435) 18 90 6.6E-33 T 28-03-2018 IPR009885 Protein of unknown function DUF1435 DDI_RS07380 874c069be0de738ff9d141bf95e06ccd 293 Pfam PF00892 EamA-like transporter family 148 280 1.3E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDI_RS07380 874c069be0de738ff9d141bf95e06ccd 293 SUPERFAMILY SSF103481 47 136 5.89E-5 T 28-03-2018 DDI_RS07380 874c069be0de738ff9d141bf95e06ccd 293 SUPERFAMILY SSF103481 190 282 4.71E-11 T 28-03-2018 DDI_RS20495 789e1210ceb2263c137643eb164ba435 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 288 5.2E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20495 789e1210ceb2263c137643eb164ba435 291 SUPERFAMILY SSF161098 89 276 1.83E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS20495 789e1210ceb2263c137643eb164ba435 291 Gene3D G3DSA:1.10.3720.10 13 285 4.2E-41 T 28-03-2018 DDI_RS11510 a81be34189fa0da2cd1fda536887064f 263 Gene3D G3DSA:1.10.3720.10 11 254 2.3E-31 T 28-03-2018 DDI_RS11510 a81be34189fa0da2cd1fda536887064f 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 5.9E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS11510 a81be34189fa0da2cd1fda536887064f 263 SUPERFAMILY SSF161098 56 237 6.65E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 DDI_RS01610 b33510ddf37bff7e8c4427fdd8b4ae7c 131 Pfam PF07681 DoxX 8 88 3.8E-17 T 28-03-2018 IPR032808 DoxX family DDI_RS13905 2db6149ca7590d31458065f88e1d8850 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 2.1E-59 T 28-03-2018 IPR026325 Protein of unknown function DUF932 DDI_RS05900 00aad9f058c9ffcc70195c02a709c662 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 3.0E-32 T 28-03-2018 DDI_RS05900 00aad9f058c9ffcc70195c02a709c662 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 3.0E-32 T 28-03-2018 DDI_RS05900 00aad9f058c9ffcc70195c02a709c662 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 155 176 3.0E-32 T 28-03-2018 DDI_RS05900 00aad9f058c9ffcc70195c02a709c662 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 3.0E-32 T 28-03-2018 DDI_RS05900 00aad9f058c9ffcc70195c02a709c662 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 3.0E-32 T 28-03-2018 DDI_RS05900 00aad9f058c9ffcc70195c02a709c662 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 3.0E-32 T 28-03-2018 DDI_RS05900 00aad9f058c9ffcc70195c02a709c662 479 Pfam PF00361 Proton-conducting membrane transporter 133 413 7.5E-61 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS05900 00aad9f058c9ffcc70195c02a709c662 479 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 119 7.0E-7 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDI_RS01945 9a72c7015a305a939490015d9ccf1570 203 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 142 1.3E-54 T 28-03-2018 IPR006521 Tail protein I DDI_RS01945 9a72c7015a305a939490015d9ccf1570 203 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 143 6.0E-60 T 28-03-2018 IPR006521 Tail protein I DDI_RS12125 81550deaf941b9dfba2193c9be29ed0c 140 Pfam PF06366 Flagellar protein FlhE 34 140 8.3E-36 T 28-03-2018 IPR009420 Flagellar protein FlhE DDI_RS18220 a93c3bf9f932d4163a6ca9583f795fde 455 TIGRFAM TIGR00908 2A0305: ethanolamine permease 2 449 1.0E-185 T 28-03-2018 IPR004757 Ethanolamine permease DDI_RS18220 a93c3bf9f932d4163a6ca9583f795fde 455 Pfam PF13520 Amino acid permease 9 419 8.4E-41 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS18220 a93c3bf9f932d4163a6ca9583f795fde 455 PIRSF PIRSF006060 1 450 1.4E-64 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 DDI_RS16365 ee6b9c190a798dde3eb9732acf5a8cf8 195 Pfam PF14065 Protein of unknown function (DUF4255) 8 180 2.4E-29 T 28-03-2018 IPR025351 Protein of unknown function DUF4255 DDI_RS00875 981606ae4dc309bafef2c75eaf1f5245 106 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 100 4.6E-23 T 28-03-2018 IPR009241 Toxin HigB-like DDI_RS01995 063e33a5f3a16e5adf8111835ff0dcd2 71 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 6.7E-20 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type DDI_RS19835 540a22e2d5c02f13d3cf38401b127902 177 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 171 17.292 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 DDI_RS19835 540a22e2d5c02f13d3cf38401b127902 177 Pfam PF04220 Der GTPase activator (YihI) 14 168 4.1E-55 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 DDI_RS11815 b510cd3abc5d860f42b59585361eb2a3 84 Pfam PF13991 BssS protein family 11 80 4.3E-38 T 28-03-2018 IPR025730 Biofilm regulator BssS DDI_RS11815 b510cd3abc5d860f42b59585361eb2a3 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 3.0E-36 T 28-03-2018 IPR025730 Biofilm regulator BssS DDI_RS04865 b85269fc3d08a2ae3dab911da29047b5 160 Gene3D G3DSA:1.20.5.430 23 57 3.9E-5 T 28-03-2018 DDI_RS04865 b85269fc3d08a2ae3dab911da29047b5 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 1.2E-51 T 28-03-2018 IPR009912 Zinc-ribbon containing domain DDI_RS02820 9397a97a0f4a6dbf84a2345309f7d672 310 Pfam PF07670 Nucleoside recognition 19 93 9.7E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DDI_RS10675 02a51326f8016bb3616d0b2b57cfb89b 720 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 173 466 9.8E-84 T 28-03-2018 IPR008766 Replication gene A protein GO:0006260 DDI_RS18465 9f013d8467206b229c9d6b2336fb499d 664 SUPERFAMILY SSF53649 278 624 9.32E-24 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 DDI_RS18465 9f013d8467206b229c9d6b2336fb499d 664 Pfam PF00884 Sulfatase 279 569 1.3E-18 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 DDI_RS18465 9f013d8467206b229c9d6b2336fb499d 664 Gene3D G3DSA:3.40.720.10 274 571 4.7E-24 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 DDI_RS10665 758a11b7c346cbd6d6e37d7db5a2b823 70 Pfam PF10809 Protein of unknown function (DUF2732) 23 68 2.9E-10 T 28-03-2018 IPR020126 Protein of unknown function DUF2732 DDI_RS09865 ab7ce99c7b53a76f9da227528ef4ec54 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 5.4E-123 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DDI_RS09865 ab7ce99c7b53a76f9da227528ef4ec54 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 3.1E-75 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DDI_RS01625 9bf415409a1321ae1ceeac8a296071d5 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 8 101 3.7E-32 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB DDI_RS01625 9bf415409a1321ae1ceeac8a296071d5 101 Gene3D G3DSA:1.20.5.1230 4 90 5.1E-5 T 28-03-2018 DDI_RS12850 db14eeae941272eb63ef2b773143c506 220 Pfam PF09335 SNARE associated Golgi protein 49 177 7.5E-25 T 28-03-2018 IPR032816 SNARE associated Golgi protein DDI_RS06725 a6f5f9e797c2edcc797436f18967a9c3 138 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 22.009 T 28-03-2018 IPR022957 Uncharacterised protein family UPF0299 DDI_RS06725 a6f5f9e797c2edcc797436f18967a9c3 138 Pfam PF03788 LrgA family 23 111 9.4E-29 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 DDI_RS20520 0c1e90dfe344f25ba23f0edf68c92fa6 402 Gene3D G3DSA:2.70.98.10 53 373 3.0E-19 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDI_RS20520 0c1e90dfe344f25ba23f0edf68c92fa6 402 Pfam PF14486 Domain of unknown function (DUF4432) 63 368 9.0E-115 T 28-03-2018 IPR027839 Protein of unknown function DUF4432 DDI_RS15805 029e7625cab8cb660ea6b32d79fd14cf 184 Pfam PF02325 YGGT family 108 171 6.7E-19 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 DDI_RS15805 029e7625cab8cb660ea6b32d79fd14cf 184 Pfam PF02325 YGGT family 10 76 3.2E-20 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 DDI_RS01395 d2ebe3b962a08922735f4b91a1c0c8b3 200 SUPERFAMILY SSF55729 5 190 3.85E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase DDI_RS01395 d2ebe3b962a08922735f4b91a1c0c8b3 200 Gene3D G3DSA:3.40.630.30 2 199 4.9E-28 T 28-03-2018 DDI_RS01395 d2ebe3b962a08922735f4b91a1c0c8b3 200 Pfam PF00583 Acetyltransferase (GNAT) family 102 185 5.2E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 DDI_RS07010 09fde2dcd407879cecd70f529710c43f 135 SUPERFAMILY SSF55724 1 133 2.77E-39 T 28-03-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 DDI_RS07010 09fde2dcd407879cecd70f529710c43f 135 Gene3D G3DSA:3.40.1000.10 1 135 3.2E-25 T 28-03-2018 DDI_RS07010 09fde2dcd407879cecd70f529710c43f 135 Pfam PF08786 DcrB 6 130 1.5E-35 T 28-03-2018 IPR014894 Protein DcrB DDI_RS00525 f21aa7f8f78b1fdf6593b9a85d547492 342 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 2 342 4.7E-144 T 28-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 DDI_RS07640 dce1ab38124972651b603c232ef4c839 336 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.0E-98 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DDI_RS07640 dce1ab38124972651b603c232ef4c839 336 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.51 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DDI_RS01895 3b3bd3e7a5700cd623170e77924bd20d 67 Pfam PF05489 Phage Tail Protein X 1 57 5.0E-29 T 28-03-2018 IPR008861 Phage Tail Protein X-like DDI_RS02430 3fe2838c3a6a9eb32f37002a1c052322 257 Gene3D G3DSA:1.10.10.10 174 257 1.1E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain DDI_RS02430 3fe2838c3a6a9eb32f37002a1c052322 257 Pfam PF13384 Homeodomain-like domain 224 255 4.3E-7 T 28-03-2018 DDI_RS01760 402df60c363badb342516228cfae02a3 72 Pfam PF04606 Ogr/Delta-like zinc finger 14 40 2.1E-5 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type DDI_RS07125 1fb533a0579aa42a1928f3cff0e1706c 136 Pfam PF03788 LrgA family 23 114 1.6E-31 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 DDI_RS07125 1fb533a0579aa42a1928f3cff0e1706c 136 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 22.781 T 28-03-2018 IPR022957 Uncharacterised protein family UPF0299 DDI_RS05140 c816aba43e2c10c4be1b0342a773468a 521 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.4E-174 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DDI_RS05140 c816aba43e2c10c4be1b0342a773468a 521 PIRSF PIRSF006446 1 520 2.0E-142 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DDI_RS15470 768f746b4f99d442642befc6a3c03fe6 324 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 139 316 5.5E-25 T 28-03-2018 IPR026337 HEXXH motif domain DDI_RS16150 4a93388a714331bbe5e3cbaf5403dc6d 273 Pfam PF04233 Phage Mu protein F like protein 59 190 1.1E-29 T 28-03-2018 IPR006528 Phage head morphogenesis domain DDI_RS16150 4a93388a714331bbe5e3cbaf5403dc6d 273 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 113 192 1.6E-16 T 28-03-2018 IPR006528 Phage head morphogenesis domain DDI_RS09325 8d80280fabc2d9671307395cc1984a5f 118 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 22 118 1.0E-23 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 DDI_RS09325 8d80280fabc2d9671307395cc1984a5f 118 Pfam PF06932 Protein of unknown function (DUF1283) 29 118 2.3E-38 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 DDI_RS11430 33d7de9387c2db34d380fdbde267c8fb 367 Pfam PF01594 AI-2E family transporter 17 347 2.0E-51 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like DDI_RS21550 913fbebc924bbcac1e09a1a42aa9c390 242 Pfam PF07356 Protein of unknown function (DUF1481) 47 238 5.4E-68 T 28-03-2018 IPR010858 Protein of unknown function DUF1481 DDI_RS15420 0e5e5ba497e766fa4ceef42f54e5a608 112 Pfam PF04977 Septum formation initiator 11 88 9.3E-30 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 DDI_RS15420 0e5e5ba497e766fa4ceef42f54e5a608 112 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.151 T 28-03-2018 IPR023081 Cell division protein FtsB DDI_RS06015 c5c4bc5f213e33f09e31baf35fb3e3c9 363 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 1.6E-156 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 DDI_RS06015 c5c4bc5f213e33f09e31baf35fb3e3c9 363 PIRSF PIRSF007313 1 361 1.9E-161 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 DDI_RS13330 7849f97fb1bff1bbadf7cecee2c7f7fb 254 Pfam PF03692 Putative zinc- or iron-chelating domain 7 111 1.3E-10 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DDI_RS05470 93bd7dd2a079ee5cdd886b38e4c4b9d4 259 Pfam PF06251 Capsule biosynthesis GfcC 33 258 4.7E-57 T 28-03-2018 IPR010425 Domain of unknown function DUF1017 DDI_RS13885 306296d83b1c1b3d469d91a3c5467a3b 102 Pfam PF05284 Protein of unknown function (DUF736) 3 98 6.8E-34 T 28-03-2018 IPR007948 Protein of unknown function DUF736 DDI_RS03940 ab3871032613fc8d9fb074b6e5250354 342 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 62 317 8.1E-75 T 28-03-2018 IPR007817 Pyoverdine biosynthesis DDI_RS15825 8877341972bdf004050f18b10be5e6b2 42 Pfam PF08085 Entericidin EcnA/B family 21 41 4.1E-8 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 DDI_RS14190 0a913ace84afb33ae5eb53755ecd871d 261 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 59 237 5.0E-55 T 28-03-2018 DDI_RS14190 0a913ace84afb33ae5eb53755ecd871d 261 Pfam PF13942 YfhG lipoprotein 62 235 6.8E-75 T 28-03-2018 IPR025262 Quorum-sensing regulator protein G DDI_RS19380 44cd20510eab253ba37cd9be048b3214 95 Pfam PF06611 Protein of unknown function (DUF1145) 4 60 7.3E-25 T 28-03-2018 IPR009525 Protein of unknown function DUF1145 DDI_RS20725 e19fd778909ada22ec53f0b99e936888 203 SUPERFAMILY SSF47203 84 195 2.9E-7 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DDI_RS20725 e19fd778909ada22ec53f0b99e936888 203 Gene3D G3DSA:1.20.140.10 76 140 1.6E-4 T 28-03-2018 DDI_RS19675 923bee14f95f6d1c2749e3400c4438eb 335 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 21 298 3.5E-8 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter DDI_RS20145 0d6912dc779585d22ee45213e8099d20 138 Gene3D G3DSA:1.20.120.330 2 134 6.8E-7 T 28-03-2018 DDI_RS06665 d6ec79da1fccb3f4179e434cf17df80c 310 Pfam PF13644 DKNYY family 107 166 6.2E-6 T 28-03-2018 IPR027375 DKNYY family DDI_RS10630 633fc5bab2ce5f8267a37730548bbfc5 876 Pfam PF02470 MlaD protein 746 806 4.1E-8 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS10630 633fc5bab2ce5f8267a37730548bbfc5 876 Pfam PF02470 MlaD protein 393 454 8.8E-7 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS10630 633fc5bab2ce5f8267a37730548bbfc5 876 Pfam PF02470 MlaD protein 633 722 6.7E-9 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS10630 633fc5bab2ce5f8267a37730548bbfc5 876 Pfam PF02470 MlaD protein 46 137 2.2E-15 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS10630 633fc5bab2ce5f8267a37730548bbfc5 876 Pfam PF02470 MlaD protein 163 227 8.8E-7 T 28-03-2018 IPR003399 Mce/MlaD DDI_RS20670 9065252b8f51290ecdbaa5c4441d1a9b 92 Pfam PF02583 Metal-sensitive transcriptional repressor 7 88 7.0E-22 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 DDI_RS21055 563edafc9ca9b919c78cd746e23d28bb 133 Pfam PF02656 Domain of unknown function (DUF202) 32 94 1.0E-14 T 28-03-2018 IPR003807 Domain of unknown function DUF202 DDI_RS12580 c013875fbf10699d363b999c5c095fb5 161 Pfam PF10777 Inner membrane protein YlaC 1 153 9.7E-69 T 28-03-2018 IPR019713 Inner membrane protein YlaC DDI_RS12020 0a49085bcb9a6ad0d07d36abd8d393aa 162 Pfam PF03748 Flagellar basal body-associated protein FliL 60 160 3.4E-23 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 DDI_RS04370 781a99353b1385e23e7d85a82d420966 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 118 3.3E-59 T 28-03-2018 IPR019693 Biofilm formation regulator YbaJ DDI_RS06970 5221fc7c7bbf4bfd01f8f75c80043119 194 Pfam PF11198 Protein of unknown function (DUF2857) 6 183 7.7E-61 T 28-03-2018 IPR021364 Protein of unknown function DUF2857 DDI_RS19245 cd21982cb5a9fbcf96bd41d834b073c8 318 Pfam PF03547 Membrane transport protein 16 167 1.9E-9 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DDI_RS19245 cd21982cb5a9fbcf96bd41d834b073c8 318 Pfam PF03547 Membrane transport protein 169 310 4.9E-14 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DDI_RS13945 1dabf106f10ef220b160f3e5ac6a4b9d 312 Gene3D G3DSA:3.40.1350.10 3 139 1.6E-7 T 28-03-2018 DDI_RS20840 9c75091946cb61fb4b1a03fb4c5f3a10 103 Gene3D G3DSA:1.10.1200.10 9 102 6.4E-5 T 28-03-2018 DDI_RS13795 946668e25c4142c6f20a1f104259c03f 132 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 20 126 4.4E-31 T 28-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like DDI_RS10600 fa5c4e4ffb0303c7c9928b92bb59ddfc 422 Pfam PF01757 Acyltransferase family 9 394 1.9E-33 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 DDI_RS16375 8bada6914aa77f375a914a73330f4fbb 517 Pfam PF17482 Phage tail sheath C-terminal domain 408 512 4.6E-9 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain DDI_RS00815 2734800602719f75b1aa159794c2e610 542 TIGRFAM TIGR04141 TIGR04141: sporadically distributed protein, TIGR04141 family 11 519 1.3E-158 T 28-03-2018 IPR026487 Sporadically distributed protein CHP04141 DDI_RS12015 89e9dc5cb39971d10b547f9274514876 443 Pfam PF02120 Flagellar hook-length control protein FliK 303 383 1.6E-21 T 28-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal DDI_RS00425 5dc7b47aff83b0812082927b8b780f8f 254 Pfam PF06693 Protein of unknown function (DUF1190) 40 209 3.9E-50 T 28-03-2018 IPR009576 Biofilm formation YgiB DDI_RS19565 d5a538a753c307cd0fc8fca676223b58 124 Pfam PF07119 Protein of unknown function (DUF1375) 19 81 2.2E-12 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 DDI_RS03970 6687184ca82de25ea2cd48369ac83edc 139 Pfam PF09345 Domain of unknown function (DUF1987) 12 136 2.5E-42 T 28-03-2018 IPR018530 Domain of unknown function DUF1987 DDI_RS16410 83bfac83a113fed145eb52af31f3596b 99 Pfam PF05488 PAAR motif 24 89 1.5E-24 T 28-03-2018 IPR008727 PAAR motif DDI_RS17545 91b061a282a15c55656c449ff3fc9415 89 Pfam PF03206 Nitrogen fixation protein NifW 9 82 2.6E-11 T 28-03-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 DDI_RS16880 2688a1f6eb23f97b7b322688f387c702 255 Pfam PF09335 SNARE associated Golgi protein 36 159 7.1E-17 T 28-03-2018 IPR032816 SNARE associated Golgi protein DDI_RS02510 424066e33c4d92ec04827fbb76991660 117 Pfam PF11604 Copper binding periplasmic protein CusF 47 105 1.1E-18 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF DDI_RS16395 f004eb6acb2be978ba2741e5f3fa0c7a 215 Gene3D G3DSA:3.10.350.10 163 213 8.7E-5 T 28-03-2018 DDI_RS10640 59b13375359ab64eb17c06120057ec44 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 3.4E-31 T 28-03-2018 IPR009954 Protein of unknown function DUF1482 DDI_RS07210 2b3e30e9ec008e08a4411d8e7f97164f 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 232 2.9E-60 T 28-03-2018 IPR006214 Bax inhibitor 1-related DDI_RS02650 8a80a354cbf303bb5dec22ec83036aa2 336 Pfam PF01594 AI-2E family transporter 12 328 7.1E-9 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like DDI_RS14780 e07da8cfbc5f277ff16394e729bb7d4c 142 Pfam PF09335 SNARE associated Golgi protein 25 133 1.1E-9 T 28-03-2018 IPR032816 SNARE associated Golgi protein DDI_RS06320 157a65e6a90d78e2abbfd24eb09fe14a 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 85 197 1.1E-37 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020