MED134_RS00075 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS00120 SM00530 Helix-turn-helix XRE-family like proteins MED134_RS00145 SM00563 Phosphate acyltransferases MED134_RS00280 SM01021 Bacteriorhodopsin-like protein MED134_RS00310 SM01034 Sensors of blue-light using FAD MED134_RS00335 SM00487 DEAD-like helicases superfamily MED134_RS00470 SM00400 zinc finger MED134_RS00500 SM00487 DEAD-like helicases superfamily MED134_RS00540 SM00829 Enoylreductase MED134_RS00545 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS00570 SM00248 ankyrin repeats MED134_RS00590 SM00448 cheY-homologous receiver domain MED134_RS00600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MED134_RS00600 SM00091 PAS domain MED134_RS00600 SM00387 Histidine kinase-like ATPases MED134_RS00600 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS00605 SM00897 FIST N domain MED134_RS00605 SM01204 MED134_RS00605 MED134_RS00610 SM00387 Histidine kinase-like ATPases MED134_RS00610 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS00620 SM00448 cheY-homologous receiver domain MED134_RS00620 SM00850 LytTr DNA-binding domain MED134_RS00640 SM00028 Tetratricopeptide repeats MED134_RS00790 SM00560 LamG-like jellyroll fold domain MED134_RS00830 SM00935 Outer membrane protein (OmpH-like) MED134_RS00880 SM00100 Cyclic nucleotide-monophosphate binding domain MED134_RS00905 SM00382 ATPases associated with a variety of cellular activities MED134_RS00935 SM00448 cheY-homologous receiver domain MED134_RS00935 SM00850 LytTr DNA-binding domain MED134_RS00960 SM00642 Alpha-amylase domain MED134_RS01000 SM00855 Phosphoglycerate mutase family MED134_RS01055 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MED134_RS01115 SM00642 Alpha-amylase domain MED134_RS01120 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS01130 SM00829 Enoylreductase MED134_RS01135 SM00878 Biotin carboxylase C-terminal domain MED134_RS01155 SM00347 helix_turn_helix multiple antibiotic resistance protein MED134_RS01160 SM00387 Histidine kinase-like ATPases MED134_RS01160 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS01240 SM00363 S4 RNA-binding domain MED134_RS01245 SM00357 Cold shock protein domain MED134_RS01320 SM00563 Phosphate acyltransferases MED134_RS01335 SM00984 UDP binding domain MED134_RS01370 SM00984 UDP binding domain MED134_RS01380 SM00984 UDP binding domain MED134_RS01400 SM00829 Enoylreductase MED134_RS01500 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS01550 SM00271 DnaJ molecular chaperone homology domain MED134_RS01555 SM00487 DEAD-like helicases superfamily MED134_RS01555 SM00490 helicase superfamily c-terminal domain MED134_RS01560 SM00867 YceI-like domain MED134_RS01565 SM00862 Transcriptional regulatory protein, C terminal MED134_RS01580 SM00357 Cold shock protein domain MED134_RS01625 SM00028 Tetratricopeptide repeats MED134_RS01655 SM00487 DEAD-like helicases superfamily MED134_RS01655 SM00490 helicase superfamily c-terminal domain MED134_RS01670 SM00822 MED134_RS01670 MED134_RS01785 SM00829 Enoylreductase MED134_RS01795 SM00054 EF-hand, calcium binding motif MED134_RS01800 SM00465 GIY-YIG type nucleases (URI domain) MED134_RS01800 SM00479 MED134_RS01800 MED134_RS01825 SM00357 Cold shock protein domain MED134_RS01850 SM00382 ATPases associated with a variety of cellular activities MED134_RS01855 SM00886 Stress responsive A/B Barrel Domain MED134_RS01900 SM01211 MED134_RS01900 MED134_RS01915 SM00631 MED134_RS01915 MED134_RS01945 SM00861 Transketolase, pyrimidine binding domain MED134_RS01950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MED134_RS01965 SM00028 Tetratricopeptide repeats MED134_RS01970 SM00434 DNA Topoisomerase IV MED134_RS01975 SM00382 ATPases associated with a variety of cellular activities MED134_RS01975 SM01086 C-terminal, D2-small domain, of ClpB protein MED134_RS02010 SM00382 ATPases associated with a variety of cellular activities MED134_RS02020 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MED134_RS02020 SM00387 Histidine kinase-like ATPases MED134_RS02020 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS02050 SM00849 Metallo-beta-lactamase superfamily MED134_RS02065 SM00478 endonuclease III MED134_RS02150 SM00382 ATPases associated with a variety of cellular activities MED134_RS02150 SM01086 C-terminal, D2-small domain, of ClpB protein MED134_RS02200 SM00487 DEAD-like helicases superfamily MED134_RS02200 SM00490 helicase superfamily c-terminal domain MED134_RS02225 SM00448 cheY-homologous receiver domain MED134_RS02225 SM00850 LytTr DNA-binding domain MED134_RS02230 SM00487 DEAD-like helicases superfamily MED134_RS02230 SM00490 helicase superfamily c-terminal domain MED134_RS02270 SM00487 DEAD-like helicases superfamily MED134_RS02270 SM00490 helicase superfamily c-terminal domain MED134_RS02310 SM00257 Lysin motif MED134_RS02325 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. MED134_RS02365 SM01323 MED134_RS02365 MED134_RS02380 SM00382 ATPases associated with a variety of cellular activities MED134_RS02385 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. MED134_RS02470 SM00244 prohibitin homologues MED134_RS02480 SM00822 MED134_RS02480 MED134_RS02485 SM00881 CoA binding domain MED134_RS02500 SM00841 Elongation factor P, C-terminal MED134_RS02500 SM01185 MED134_RS02500 MED134_RS02520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MED134_RS02525 SM00448 cheY-homologous receiver domain MED134_RS02540 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS02545 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS02595 SM00434 DNA Topoisomerase IV MED134_RS02600 SM00387 Histidine kinase-like ATPases MED134_RS02600 SM00433 TopoisomeraseII MED134_RS02610 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS02620 SM00825 Beta-ketoacyl synthase MED134_RS02665 SM00861 Transketolase, pyrimidine binding domain MED134_RS02705 SM00986 Uracil DNA glycosylase superfamily MED134_RS02705 SM00987 UreE urease accessory protein, C-terminal domain MED134_RS02710 SM00533 DNA-binding domain of DNA mismatch repair MUTS family MED134_RS02710 SM00534 ATPase domain of DNA mismatch repair MUTS family MED134_RS02895 SM00850 LytTr DNA-binding domain MED134_RS02935 SM00631 MED134_RS02935 MED134_RS03065 SM00487 DEAD-like helicases superfamily MED134_RS03065 SM00490 helicase superfamily c-terminal domain MED134_RS03075 SM00873 B3/4 domain MED134_RS03075 SM00874 tRNA synthetase B5 domain MED134_RS03075 SM00896 Ferredoxin-fold anticodon binding domain MED134_RS03090 SM00382 ATPases associated with a variety of cellular activities MED134_RS03135 SM00480 DNA polymerase III beta subunit MED134_RS03245 SM00382 ATPases associated with a variety of cellular activities MED134_RS03265 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MED134_RS03265 SM01209 MED134_RS03265 MED134_RS03285 SM00487 DEAD-like helicases superfamily MED134_RS03285 SM00490 helicase superfamily c-terminal domain MED134_RS03325 SM00464 Found in ATP-dependent protease La (LON) MED134_RS03365 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. MED134_RS03375 SM00871 Bacterial transcription activator, effector binding domain MED134_RS03405 SM00257 Lysin motif MED134_RS03420 SM00344 helix_turn_helix ASNC type MED134_RS03450 SM00382 ATPases associated with a variety of cellular activities MED134_RS03450 SM00962 SRP54-type protein, GTPase domain MED134_RS03450 SM00963 SRP54-type protein, helical bundle domain MED134_RS03455 SM00645 Papain family cysteine protease MED134_RS03485 SM00382 ATPases associated with a variety of cellular activities MED134_RS03495 SM00327 von Willebrand factor (vWF) type A domain MED134_RS03615 SM00646 MED134_RS03615 MED134_RS03755 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family MED134_RS03760 SM00937 MED134_RS03760 MED134_RS03775 SM00248 ankyrin repeats MED134_RS03785 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS03830 SM01230 MED134_RS03830 MED134_RS03835 SM01230 MED134_RS03835 MED134_RS03845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MED134_RS03845 SM00954 Region found in RelA / SpoT proteins MED134_RS03855 SM00788 Adenylosuccinate synthetase MED134_RS03945 SM00382 ATPases associated with a variety of cellular activities MED134_RS04000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MED134_RS04005 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MED134_RS04010 SM00530 Helix-turn-helix XRE-family like proteins MED134_RS04035 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MED134_RS04125 SM00937 MED134_RS04125 MED134_RS04140 SM00344 helix_turn_helix ASNC type MED134_RS04180 SM00843 MED134_RS04180 MED134_RS04260 SM00028 Tetratricopeptide repeats MED134_RS04275 SM00631 MED134_RS04275 MED134_RS04285 SM00382 ATPases associated with a variety of cellular activities MED134_RS04325 SM00732 Likely ribonuclease with RNase H fold. MED134_RS04360 SM00316 Ribosomal protein S1-like RNA-binding domain MED134_RS04410 SM00382 ATPases associated with a variety of cellular activities MED134_RS04410 SM00464 Found in ATP-dependent protease La (LON) MED134_RS04465 SM00642 Alpha-amylase domain MED134_RS04535 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MED134_RS04560 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS04650 SM00100 Cyclic nucleotide-monophosphate binding domain MED134_RS04650 SM00419 helix_turn_helix, cAMP Regulatory protein MED134_RS04650 SM00448 cheY-homologous receiver domain MED134_RS04655 SM00091 PAS domain MED134_RS04655 SM00387 Histidine kinase-like ATPases MED134_RS04655 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS04700 SM00060 Fibronectin type 3 domain MED134_RS04700 SM00137 Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others) MED134_RS04700 SM00631 MED134_RS04700 MED134_RS04710 SM00137 Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others) MED134_RS04710 SM00560 LamG-like jellyroll fold domain MED134_RS04755 SM00797 Allophanate hydrolase subunit 2 MED134_RS04760 SM00796 Allophanate hydrolase subunit 1 MED134_RS04775 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MED134_RS04775 SM00091 PAS domain MED134_RS04775 SM00387 Histidine kinase-like ATPases MED134_RS04780 SM00382 ATPases associated with a variety of cellular activities MED134_RS04785 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain MED134_RS04795 SM00977 TilS substrate C-terminal domain MED134_RS04845 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS04855 SM00448 cheY-homologous receiver domain MED134_RS04860 SM00448 cheY-homologous receiver domain MED134_RS04865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MED134_RS04865 SM00387 Histidine kinase-like ATPases MED134_RS04865 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS04870 SM00091 PAS domain MED134_RS04870 SM00138 Methyltransferase, chemotaxis proteins MED134_RS04870 SM00387 Histidine kinase-like ATPases MED134_RS04870 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS04880 SM00663 RNA polymerase I subunit A N-terminus MED134_RS04905 SM00649 Ribosomal protein L11/L12 MED134_RS04910 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. MED134_RS04910 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. MED134_RS04990 SM00341 Helicase and RNase D C-terminal MED134_RS04990 SM00487 DEAD-like helicases superfamily MED134_RS04990 SM00490 helicase superfamily c-terminal domain MED134_RS04990 SM00956 MED134_RS04990 MED134_RS04995 SM00116 Domain in cystathionine beta-synthase and other proteins. MED134_RS05010 SM00382 ATPases associated with a variety of cellular activities MED134_RS05040 SM00448 cheY-homologous receiver domain MED134_RS05040 SM00850 LytTr DNA-binding domain MED134_RS05050 SM00840 MED134_RS05050 MED134_RS05055 SM01234 MED134_RS05055 MED134_RS05080 SM00852 Probable molybdopterin binding domain MED134_RS05095 SM00479 MED134_RS05095 MED134_RS05120 SM00493 MED134_RS05120 MED134_RS05150 SM00465 GIY-YIG type nucleases (URI domain) MED134_RS05150 SM00479 MED134_RS05150 MED134_RS05165 SM00448 cheY-homologous receiver domain MED134_RS05165 SM00862 Transcriptional regulatory protein, C terminal MED134_RS05170 SM00387 Histidine kinase-like ATPases MED134_RS05170 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS05210 SM01409 MED134_RS05210 MED134_RS05220 SM01130 MED134_RS05220 MED134_RS05245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MED134_RS05245 SM00292 breast cancer carboxy-terminal domain MED134_RS05245 SM00532 Ligase N family MED134_RS05320 SM00530 Helix-turn-helix XRE-family like proteins MED134_RS05345 SM00382 ATPases associated with a variety of cellular activities MED134_RS05375 SM00470 ParB-like nuclease domain MED134_RS05415 SM00853 MutL C terminal dimerisation domain MED134_RS05415 SM01340 MED134_RS05415 MED134_RS05430 SM00028 Tetratricopeptide repeats MED134_RS05450 SM00836 DALR anticodon binding domain MED134_RS05450 SM01016 Arginyl tRNA synthetase N terminal dom MED134_RS05530 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS05550 SM00530 Helix-turn-helix XRE-family like proteins MED134_RS05605 SM00830 Chorismate mutase type II MED134_RS05625 SM00382 ATPases associated with a variety of cellular activities MED134_RS05635 SM01387 MED134_RS05635 MED134_RS05640 SM00316 Ribosomal protein S1-like RNA-binding domain MED134_RS05640 SM00322 K homology RNA-binding domain MED134_RS05675 SM00028 Tetratricopeptide repeats MED134_RS05755 SM00382 ATPases associated with a variety of cellular activities MED134_RS05810 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. MED134_RS05855 SM00382 ATPases associated with a variety of cellular activities MED134_RS05870 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS05875 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MED134_RS05880 SM00387 Histidine kinase-like ATPases MED134_RS05880 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS05880 SM00448 cheY-homologous receiver domain MED134_RS05960 SM00870 MED134_RS05960 MED134_RS06070 SM00382 ATPases associated with a variety of cellular activities MED134_RS06110 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain MED134_RS06110 SM00437 Bacterial DNA topoisomerase I DNA-binding domain MED134_RS06110 SM00493 MED134_RS06110 MED134_RS06125 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS06130 SM00382 ATPases associated with a variety of cellular activities MED134_RS06150 SM00883 Chaperonin 10 Kd subunit MED134_RS06225 SM00798 AICARFT/IMPCHase bienzyme MED134_RS06225 SM00851 MGS-like domain MED134_RS06230 SM00268 Actin MED134_RS06275 SM00481 DNA polymerase alpha chain like domain MED134_RS06305 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MED134_RS06360 SM00382 ATPases associated with a variety of cellular activities MED134_RS06400 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MED134_RS06415 SM00477 DNA/RNA non-specific endonuclease MED134_RS06415 SM00892 DNA/RNA non-specific endonuclease MED134_RS06425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MED134_RS06425 SM00245 tail specific protease MED134_RS06485 SM00116 Domain in cystathionine beta-synthase and other proteins. MED134_RS06485 SM01091 Transporter associated domain MED134_RS06500 SM00028 Tetratricopeptide repeats MED134_RS06560 SM00450 Rhodanese Homology Domain MED134_RS06675 SM00878 Biotin carboxylase C-terminal domain MED134_RS06770 SM00450 Rhodanese Homology Domain MED134_RS06780 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs MED134_RS06780 SM00474 3'-5' exonuclease MED134_RS06780 SM00475 5'-3' exonuclease MED134_RS06780 SM00482 DNA polymerase A domain MED134_RS06880 SM00387 Histidine kinase-like ATPases MED134_RS06885 SM00421 helix_turn_helix, Lux Regulon MED134_RS06885 SM00448 cheY-homologous receiver domain MED134_RS06985 SM00448 cheY-homologous receiver domain MED134_RS06985 SM00850 LytTr DNA-binding domain MED134_RS07030 SM00900 MED134_RS07030 MED134_RS07085 SM01018 B12 binding domain MED134_RS07145 SM00387 Histidine kinase-like ATPases MED134_RS07145 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS07150 SM00448 cheY-homologous receiver domain MED134_RS07150 SM00862 Transcriptional regulatory protein, C terminal MED134_RS07200 SM00861 Transketolase, pyrimidine binding domain MED134_RS07205 SM00893 Electron transfer flavoprotein domain MED134_RS07210 SM00893 Electron transfer flavoprotein domain MED134_RS07275 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MED134_RS07285 SM00530 Helix-turn-helix XRE-family like proteins MED134_RS07365 SM00533 DNA-binding domain of DNA mismatch repair MUTS family MED134_RS07365 SM00534 ATPase domain of DNA mismatch repair MUTS family MED134_RS07470 SM00382 ATPases associated with a variety of cellular activities MED134_RS07470 SM00994 ClpX C4-type zinc finger MED134_RS07470 SM01086 C-terminal, D2-small domain, of ClpB protein MED134_RS07535 SM00935 Outer membrane protein (OmpH-like) MED134_RS07540 SM00935 Outer membrane protein (OmpH-like) MED134_RS07550 SM00448 cheY-homologous receiver domain MED134_RS07550 SM00850 LytTr DNA-binding domain MED134_RS07555 SM00028 Tetratricopeptide repeats MED134_RS07575 SM00932 Scaffold protein Nfu/NifU N terminal MED134_RS07610 SM00479 MED134_RS07610 MED134_RS07610 SM00481 DNA polymerase alpha chain like domain MED134_RS07620 SM00028 Tetratricopeptide repeats MED134_RS07635 SM00861 Transketolase, pyrimidine binding domain MED134_RS07785 SM01130 MED134_RS07785 MED134_RS07790 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS07795 SM00448 cheY-homologous receiver domain MED134_RS07805 SM00448 cheY-homologous receiver domain MED134_RS07820 SM00534 ATPase domain of DNA mismatch repair MUTS family MED134_RS07860 SM00028 Tetratricopeptide repeats MED134_RS07860 SM00387 Histidine kinase-like ATPases MED134_RS07860 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS07860 SM00448 cheY-homologous receiver domain MED134_RS07870 SM00341 Helicase and RNase D C-terminal MED134_RS07870 SM00487 DEAD-like helicases superfamily MED134_RS07870 SM00490 helicase superfamily c-terminal domain MED134_RS07870 SM00956 MED134_RS07870 MED134_RS07900 SM00448 cheY-homologous receiver domain MED134_RS07905 SM00448 cheY-homologous receiver domain MED134_RS07910 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. MED134_RS07915 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS07915 SM00876 Biotin and Thiamin Synthesis associated domain MED134_RS07945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MED134_RS07960 SM00530 Helix-turn-helix XRE-family like proteins MED134_RS07970 SM00382 ATPases associated with a variety of cellular activities MED134_RS08010 SM00421 helix_turn_helix, Lux Regulon MED134_RS08015 SM00382 ATPases associated with a variety of cellular activities MED134_RS08080 SM00100 Cyclic nucleotide-monophosphate binding domain MED134_RS08080 SM00116 Domain in cystathionine beta-synthase and other proteins. MED134_RS08085 SM00479 MED134_RS08085 MED134_RS08095 SM00248 ankyrin repeats MED134_RS08145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MED134_RS08145 SM00245 tail specific protease MED134_RS08165 SM00387 Histidine kinase-like ATPases MED134_RS08165 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS08165 SM00448 cheY-homologous receiver domain MED134_RS08170 SM00173 Ras subfamily of RAS small GTPases MED134_RS08170 SM00174 Rho (Ras homology) subfamily of Ras-like small GTPases MED134_RS08170 SM00175 Rab subfamily of small GTPases MED134_RS08200 SM00563 Phosphate acyltransferases MED134_RS08220 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MED134_RS08260 SM00116 Domain in cystathionine beta-synthase and other proteins. MED134_RS08260 SM00924 MgtE intracellular N domain MED134_RS08265 SM00650 Ribosomal RNA adenine dimethylases MED134_RS08275 SM00028 Tetratricopeptide repeats MED134_RS08285 SM00752 Horizontally Transferred TransMembrane Domain MED134_RS08290 SM00904 Riboflavin kinase MED134_RS08305 SM01400 MED134_RS08305 MED134_RS08365 SM00382 ATPases associated with a variety of cellular activities MED134_RS08470 SM00487 DEAD-like helicases superfamily MED134_RS08470 SM00490 helicase superfamily c-terminal domain MED134_RS08485 SM00316 Ribosomal protein S1-like RNA-binding domain MED134_RS08485 SM00732 Likely ribonuclease with RNase H fold. MED134_RS08525 SM00530 Helix-turn-helix XRE-family like proteins MED134_RS08540 SM00487 DEAD-like helicases superfamily MED134_RS08540 SM00490 helicase superfamily c-terminal domain MED134_RS08540 SM00982 MED134_RS08540 MED134_RS08540 SM01058 CarD-like/TRCF domain MED134_RS08585 SM00271 DnaJ molecular chaperone homology domain MED134_RS08595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MED134_RS08625 SM00387 Histidine kinase-like ATPases MED134_RS08625 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS08660 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS08705 SM00487 DEAD-like helicases superfamily MED134_RS08710 SM01004 Delta-aminolevulinic acid dehydratase MED134_RS08725 SM00387 Histidine kinase-like ATPases MED134_RS08725 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS08725 SM00448 cheY-homologous receiver domain MED134_RS08760 SM00382 ATPases associated with a variety of cellular activities MED134_RS08770 SM00882 Coenzyme A transferase MED134_RS08775 SM00882 Coenzyme A transferase MED134_RS08795 SM00450 Rhodanese Homology Domain MED134_RS08800 SM00382 ATPases associated with a variety of cellular activities MED134_RS08815 SM00563 Phosphate acyltransferases MED134_RS08885 SM00448 cheY-homologous receiver domain MED134_RS08890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MED134_RS08890 SM00387 Histidine kinase-like ATPases MED134_RS08915 SM00465 GIY-YIG type nucleases (URI domain) MED134_RS08940 SM00387 Histidine kinase-like ATPases MED134_RS08940 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS08945 SM00358 Double-stranded RNA binding motif MED134_RS08945 SM00535 Ribonuclease III family MED134_RS08950 SM00825 Beta-ketoacyl synthase MED134_RS09030 SM00849 Metallo-beta-lactamase superfamily MED134_RS09065 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MED134_RS09065 SM00245 tail specific protease MED134_RS09090 SM00316 Ribosomal protein S1-like RNA-binding domain MED134_RS09090 SM00357 Cold shock protein domain MED134_RS09090 SM00955 MED134_RS09090 MED134_RS09115 SM00905 Dihydroneopterin aldolase MED134_RS09145 SM00244 prohibitin homologues MED134_RS09175 SM01228 MED134_RS09175 MED134_RS09185 SM00935 Outer membrane protein (OmpH-like) MED134_RS09200 SM00257 Lysin motif MED134_RS09315 SM01209 MED134_RS09315 MED134_RS09315 SM01210 MED134_RS09315 MED134_RS09355 SM00382 ATPases associated with a variety of cellular activities MED134_RS09375 SM00382 ATPases associated with a variety of cellular activities MED134_RS09380 SM00028 Tetratricopeptide repeats MED134_RS09430 SM00421 helix_turn_helix, Lux Regulon MED134_RS09460 SM00028 Tetratricopeptide repeats MED134_RS09505 SM00257 Lysin motif MED134_RS09525 SM00072 Guanylate kinase homologues. MED134_RS09635 SM00903 Flavin reductase like domain MED134_RS09700 SM00116 Domain in cystathionine beta-synthase and other proteins. MED134_RS09805 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MED134_RS09845 SM01005 Alanine racemase, C-terminal domain MED134_RS09855 SM00859 Semialdehyde dehydrogenase, NAD binding domain MED134_RS09860 SM01059 Chloramphenicol acetyltransferase MED134_RS09910 SM00947 Carbonic anhydrase MED134_RS09925 SM00028 Tetratricopeptide repeats MED134_RS09925 SM00287 Bacterial SH3 domain homologues MED134_RS09935 SM00028 Tetratricopeptide repeats MED134_RS09940 SM00327 von Willebrand factor (vWF) type A domain MED134_RS09945 SM00327 von Willebrand factor (vWF) type A domain MED134_RS09985 SM00387 Histidine kinase-like ATPases MED134_RS10135 SM01002 Alanine dehydrogenase/PNT, C-terminal domain MED134_RS10135 SM01003 Alanine dehydrogenase/PNT, N-terminal domain MED134_RS10140 SM00679 Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins. MED134_RS10155 SM00996 S-adenosyl-L-homocysteine hydrolase MED134_RS10155 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MED134_RS10175 SM00344 helix_turn_helix ASNC type MED134_RS10205 SM00116 Domain in cystathionine beta-synthase and other proteins. MED134_RS10205 SM01091 Transporter associated domain MED134_RS10220 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS10225 SM00478 endonuclease III MED134_RS10230 SM00411 bacterial (prokaryotic) histone like domain MED134_RS10260 SM00529 Helix-turn-helix diphteria tox regulatory element MED134_RS10260 SM00899 MED134_RS10260 MED134_RS10270 SM00382 ATPases associated with a variety of cellular activities MED134_RS10300 SM00899 MED134_RS10300 MED134_RS10315 SM00237 Domains in Na-Ca exchangers and integrin-beta4 MED134_RS10350 SM00028 Tetratricopeptide repeats MED134_RS10375 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS10395 SM01118 MED134_RS10395 MED134_RS10410 SM00859 Semialdehyde dehydrogenase, NAD binding domain MED134_RS10475 SM00345 helix_turn_helix gluconate operon transcriptional repressor MED134_RS10475 SM00895 MED134_RS10475 MED134_RS10485 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins MED134_RS10515 SM00710 Parallel beta-helix repeats MED134_RS10525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MED134_RS10575 SM00448 cheY-homologous receiver domain MED134_RS10575 SM00850 LytTr DNA-binding domain MED134_RS10595 SM00640 Glycosyl hydrolases family 32 MED134_RS10600 SM00354 helix_turn _helix lactose operon repressor MED134_RS10625 SM00871 Bacterial transcription activator, effector binding domain MED134_RS10690 SM00357 Cold shock protein domain MED134_RS10760 SM00448 cheY-homologous receiver domain MED134_RS10760 SM00862 Transcriptional regulatory protein, C terminal MED134_RS10765 SM00387 Histidine kinase-like ATPases MED134_RS10765 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS10875 SM00382 ATPases associated with a variety of cellular activities MED134_RS10885 SM00849 Metallo-beta-lactamase superfamily MED134_RS10980 SM01011 Aminopeptidase P, N-terminal domain MED134_RS11035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MED134_RS11045 SM00861 Transketolase, pyrimidine binding domain MED134_RS11075 SM00363 S4 RNA-binding domain MED134_RS11085 SM01259 MED134_RS11085 MED134_RS11125 SM00382 ATPases associated with a variety of cellular activities MED134_RS11230 SM00382 ATPases associated with a variety of cellular activities MED134_RS11265 SM00919 Malic enzyme, NAD binding domain MED134_RS11265 SM01274 MED134_RS11265 MED134_RS11315 SM00849 Metallo-beta-lactamase superfamily MED134_RS11375 SM00382 ATPases associated with a variety of cellular activities MED134_RS11445 SM00422 helix_turn_helix, mercury resistance MED134_RS11455 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MED134_RS11465 SM00450 Rhodanese Homology Domain MED134_RS11555 SM00344 helix_turn_helix ASNC type MED134_RS11570 SM00861 Transketolase, pyrimidine binding domain MED134_RS11595 SM00047 Lysozyme subfamily 2 MED134_RS11595 SM00257 Lysin motif MED134_RS11630 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS11640 SM00460 Transglutaminase/protease-like homologues MED134_RS11730 SM00322 K homology RNA-binding domain MED134_RS11730 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MED134_RS11745 SM00859 Semialdehyde dehydrogenase, NAD binding domain MED134_RS11790 SM01329 MED134_RS11790 MED134_RS11935 SM00382 ATPases associated with a variety of cellular activities MED134_RS11945 SM00098 Alkaline phosphatase homologues MED134_RS12010 SM01001 AIR carboxylase MED134_RS12035 SM00028 Tetratricopeptide repeats MED134_RS12170 SM00191 Integrin alpha (beta-propellor repeats). MED134_RS12175 SM00382 ATPases associated with a variety of cellular activities MED134_RS12185 SM00967 RNA 2'-O ribose methyltransferase substrate binding MED134_RS12225 SM00838 Elongation factor G C-terminus MED134_RS12225 SM00889 Elongation factor G, domain IV MED134_RS12230 SM01403 MED134_RS12230 MED134_RS12250 SM01382 MED134_RS12250 MED134_RS12250 SM01383 MED134_RS12250 MED134_RS12265 SM00322 K homology RNA-binding domain MED134_RS12285 SM01374 MED134_RS12285 MED134_RS12290 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. MED134_RS12355 SM00363 S4 RNA-binding domain MED134_RS12355 SM01390 MED134_RS12355 MED134_RS12360 SM00662 RNA polymerases D MED134_RS12375 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain MED134_RS12380 SM01192 MED134_RS12380 MED134_RS12380 SM01193 MED134_RS12380 MED134_RS12390 SM00871 Bacterial transcription activator, effector binding domain MED134_RS12400 SM00886 Stress responsive A/B Barrel Domain MED134_RS12450 SM00400 zinc finger MED134_RS12450 SM00493 MED134_RS12450 MED134_RS12455 SM00421 helix_turn_helix, Lux Regulon MED134_RS12455 SM00448 cheY-homologous receiver domain MED134_RS12505 SM00740 MED134_RS12505 MED134_RS12545 SM00842 Cell division protein FtsA MED134_RS12550 SM00864 Tubulin/FtsZ family, GTPase domain MED134_RS12550 SM00865 Tubulin/FtsZ family, C-terminal domain MED134_RS12595 SM00450 Rhodanese Homology Domain MED134_RS12600 SM00450 Rhodanese Homology Domain MED134_RS12605 SM00450 Rhodanese Homology Domain MED134_RS12605 SM00849 Metallo-beta-lactamase superfamily MED134_RS12615 SM00419 helix_turn_helix, cAMP Regulatory protein MED134_RS12690 SM00014 Acid phosphatase homologues MED134_RS12725 SM00465 GIY-YIG type nucleases (URI domain) MED134_RS12790 SM00387 Histidine kinase-like ATPases MED134_RS12790 SM00433 TopoisomeraseII MED134_RS12805 SM00382 ATPases associated with a variety of cellular activities MED134_RS12805 SM00962 SRP54-type protein, GTPase domain MED134_RS12805 SM00963 SRP54-type protein, helical bundle domain MED134_RS12820 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS12830 SM00631 MED134_RS12830 MED134_RS12890 SM00422 helix_turn_helix, mercury resistance MED134_RS12920 SM00363 S4 RNA-binding domain MED134_RS12935 SM00861 Transketolase, pyrimidine binding domain MED134_RS12995 SM00363 S4 RNA-binding domain MED134_RS13000 SM00740 MED134_RS13000 MED134_RS13060 SM00867 YceI-like domain MED134_RS13065 SM00347 helix_turn_helix multiple antibiotic resistance protein MED134_RS13080 SM00450 Rhodanese Homology Domain MED134_RS13085 SM00450 Rhodanese Homology Domain MED134_RS13185 SM01002 Alanine dehydrogenase/PNT, C-terminal domain MED134_RS13185 SM01003 Alanine dehydrogenase/PNT, N-terminal domain MED134_RS13195 SM00867 YceI-like domain MED134_RS13205 SM00271 DnaJ molecular chaperone homology domain MED134_RS13210 SM00382 ATPases associated with a variety of cellular activities MED134_RS13230 SM00382 ATPases associated with a variety of cellular activities MED134_RS13230 SM00448 cheY-homologous receiver domain MED134_RS13260 SM00014 Acid phosphatase homologues MED134_RS13270 SM00382 ATPases associated with a variety of cellular activities MED134_RS13305 SM00957 SecA DEAD-like domain MED134_RS13305 SM00958 SecA preprotein cross-linking domain MED134_RS13325 SM00382 ATPases associated with a variety of cellular activities MED134_RS13335 SM00382 ATPases associated with a variety of cellular activities MED134_RS13360 SM00382 ATPases associated with a variety of cellular activities MED134_RS13580 SM00562 MED134_RS13580 MED134_RS13590 SM00838 Elongation factor G C-terminus MED134_RS13650 SM00382 ATPases associated with a variety of cellular activities MED134_RS13655 SM00028 Tetratricopeptide repeats MED134_RS13690 SM00226 Low molecular weight phosphatase family MED134_RS13715 SM00382 ATPases associated with a variety of cellular activities MED134_RS13715 SM00760 Bacterial dnaA protein helix-turn-helix domain MED134_RS13735 SM00729 Elongator protein 3, MiaB family, Radical SAM MED134_RS13850 SM00981 MED134_RS13850 MED134_RS13950 SM00946 Prolyl-tRNA synthetase, C-terminal MED134_RS13970 SM00642 Alpha-amylase domain MED134_RS13980 SM00411 bacterial (prokaryotic) histone like domain MED134_RS13990 SM00487 DEAD-like helicases superfamily MED134_RS13990 SM00490 helicase superfamily c-terminal domain MED134_RS14020 SM01350 MED134_RS14020 MED134_RS14035 SM00382 ATPases associated with a variety of cellular activities MED134_RS14125 SM00382 ATPases associated with a variety of cellular activities MED134_RS14135 SM00487 DEAD-like helicases superfamily MED134_RS14135 SM00490 helicase superfamily c-terminal domain MED134_RS14140 SM00849 Metallo-beta-lactamase superfamily MED134_RS14145 SM00704 CDGSH-type zinc finger. Function unknown. MED134_RS14150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MED134_RS14175 SM00487 DEAD-like helicases superfamily MED134_RS14175 SM00490 helicase superfamily c-terminal domain MED134_RS14190 SM00752 Horizontally Transferred TransMembrane Domain MED134_RS14205 SM00116 Domain in cystathionine beta-synthase and other proteins. MED134_RS14205 SM01240 MED134_RS14205 MED134_RS14300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MED134_RS14375 SM00387 Histidine kinase-like ATPases MED134_RS14375 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS14380 SM00448 cheY-homologous receiver domain MED134_RS14380 SM00862 Transcriptional regulatory protein, C terminal MED134_RS14410 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS14450 SM00342 helix_turn_helix, arabinose operon control protein MED134_RS14470 SM00357 Cold shock protein domain MED134_RS14470 SM00382 ATPases associated with a variety of cellular activities MED134_RS14470 SM00959 Rho termination factor, N-terminal domain MED134_RS14525 SM00530 Helix-turn-helix XRE-family like proteins MED134_RS14530 SM00631 MED134_RS14530 MED134_RS14535 SM00344 helix_turn_helix ASNC type MED134_RS14565 SM01002 Alanine dehydrogenase/PNT, C-terminal domain MED134_RS14565 SM01003 Alanine dehydrogenase/PNT, N-terminal domain MED134_RS14680 SM00327 von Willebrand factor (vWF) type A domain MED134_RS14720 SM00387 Histidine kinase-like ATPases MED134_RS14720 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS14725 SM00387 Histidine kinase-like ATPases MED134_RS14725 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS14740 SM00060 Fibronectin type 3 domain MED134_RS14740 SM00137 Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others) MED134_RS14800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MED134_RS14800 SM00091 PAS domain MED134_RS14800 SM00387 Histidine kinase-like ATPases MED134_RS14800 SM00388 His Kinase A (phosphoacceptor) domain MED134_RS14800 SM00448 cheY-homologous receiver domain