CPU03_RS00010 SM01022 CPU03_RS00010 CPU03_RS00020 SM00357 Cold shock protein domain CPU03_RS00065 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPU03_RS00075 SM00857 Resolvase, N terminal domain CPU03_RS00110 SM00060 Fibronectin type 3 domain CPU03_RS00120 SM00232 JAB/MPN domain CPU03_RS00225 SM01252 CPU03_RS00225 CPU03_RS00325 SM00530 Helix-turn-helix XRE-family like proteins CPU03_RS00415 SM00091 PAS domain CPU03_RS00415 SM00382 ATPases associated with a variety of cellular activities CPU03_RS00420 SM00450 Rhodanese Homology Domain CPU03_RS00455 SM00382 ATPases associated with a variety of cellular activities CPU03_RS00475 SM00382 ATPases associated with a variety of cellular activities CPU03_RS00480 SM00382 ATPases associated with a variety of cellular activities CPU03_RS00510 SM00357 Cold shock protein domain CPU03_RS00510 SM00955 CPU03_RS00510 CPU03_RS00530 SM00382 ATPases associated with a variety of cellular activities CPU03_RS00675 SM00382 ATPases associated with a variety of cellular activities CPU03_RS00680 SM00382 ATPases associated with a variety of cellular activities CPU03_RS00725 SM00346 helix_turn_helix isocitrate lyase regulation CPU03_RS00775 SM00052 Putative diguanylate phosphodiesterase CPU03_RS00780 SM01091 Transporter associated domain CPU03_RS00815 SM00357 Cold shock protein domain CPU03_RS00830 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPU03_RS00830 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPU03_RS00830 SM00493 CPU03_RS00830 CPU03_RS00855 SM00855 Phosphoglycerate mutase family CPU03_RS00865 SM00363 S4 RNA-binding domain CPU03_RS00880 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS00890 SM00062 Bacterial periplasmic substrate-binding proteins CPU03_RS00910 SM00481 DNA polymerase alpha chain like domain CPU03_RS00945 SM00749 bacterial OsmY and nodulation domain CPU03_RS01010 SM00155 Phospholipase D. Active site motifs. CPU03_RS01020 SM00382 ATPases associated with a variety of cellular activities CPU03_RS01025 SM00382 ATPases associated with a variety of cellular activities CPU03_RS01065 SM00528 Domain in histone-like proteins of HNS family CPU03_RS01075 SM00448 cheY-homologous receiver domain CPU03_RS01120 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPU03_RS01120 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPU03_RS01120 SM00493 CPU03_RS01120 CPU03_RS01125 SM00450 Rhodanese Homology Domain CPU03_RS01145 SM00870 CPU03_RS01145 CPU03_RS01170 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPU03_RS01225 SM00763 PrkA AAA domain CPU03_RS01235 SM00382 ATPases associated with a variety of cellular activities CPU03_RS01265 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS01320 SM00341 Helicase and RNase D C-terminal CPU03_RS01320 SM00474 3'-5' exonuclease CPU03_RS01340 SM00487 DEAD-like helicases superfamily CPU03_RS01340 SM00491 CPU03_RS01340 CPU03_RS01400 SM00257 Lysin motif CPU03_RS01410 SM00382 ATPases associated with a variety of cellular activities CPU03_RS01420 SM00382 ATPases associated with a variety of cellular activities CPU03_RS01425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPU03_RS01450 SM00834 Putative regulatory protein CPU03_RS01500 SM00836 DALR anticodon binding domain CPU03_RS01500 SM01016 Arginyl tRNA synthetase N terminal dom CPU03_RS01535 SM00481 DNA polymerase alpha chain like domain CPU03_RS01540 SM00267 diguanylate cyclase CPU03_RS01605 SM00937 CPU03_RS01605 CPU03_RS01625 SM01400 CPU03_RS01625 CPU03_RS01670 SM00487 DEAD-like helicases superfamily CPU03_RS01670 SM00490 helicase superfamily c-terminal domain CPU03_RS01710 SM00014 Acid phosphatase homologues CPU03_RS01750 SM00448 cheY-homologous receiver domain CPU03_RS01755 SM00448 cheY-homologous receiver domain CPU03_RS01760 SM00138 Methyltransferase, chemotaxis proteins CPU03_RS01765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS01765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS01765 SM00319 Homologues of the ligand binding domain of Tar CPU03_RS01770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS01770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS01770 SM00319 Homologues of the ligand binding domain of Tar CPU03_RS01775 SM00260 Two component signalling adaptor domain CPU03_RS01780 SM00073 Histidine Phosphotransfer domain CPU03_RS01780 SM00260 Two component signalling adaptor domain CPU03_RS01780 SM00387 Histidine kinase-like ATPases CPU03_RS01780 SM01231 CPU03_RS01780 CPU03_RS01840 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS01860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS01860 SM00387 Histidine kinase-like ATPases CPU03_RS01860 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS01865 SM00448 cheY-homologous receiver domain CPU03_RS01925 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CPU03_RS01925 SM00634 Bacterial Ig-like domain (group 1) CPU03_RS01925 SM00635 Bacterial Ig-like domain 2 CPU03_RS01930 SM00357 Cold shock protein domain CPU03_RS01940 SM00357 Cold shock protein domain CPU03_RS02020 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CPU03_RS02025 SM00992 Hemimethylated DNA-binding protein YccV like CPU03_RS02030 SM00881 CoA binding domain CPU03_RS02040 SM00851 MGS-like domain CPU03_RS02110 SM00382 ATPases associated with a variety of cellular activities CPU03_RS02115 SM00981 CPU03_RS02115 CPU03_RS02195 SM00047 Lysozyme subfamily 2 CPU03_RS02240 SM00858 CPU03_RS02240 CPU03_RS02345 SM01350 CPU03_RS02345 CPU03_RS02355 SM00984 UDP binding domain CPU03_RS02490 SM00518 AP endonuclease family 2 CPU03_RS02500 SM00487 DEAD-like helicases superfamily CPU03_RS02500 SM00488 CPU03_RS02500 CPU03_RS02500 SM00491 CPU03_RS02500 CPU03_RS02540 SM00919 Malic enzyme, NAD binding domain CPU03_RS02540 SM01274 CPU03_RS02540 CPU03_RS02550 SM00052 Putative diguanylate phosphodiesterase CPU03_RS02565 SM00852 Probable molybdopterin binding domain CPU03_RS02690 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPU03_RS02690 SM00292 breast cancer carboxy-terminal domain CPU03_RS02690 SM00532 Ligase N family CPU03_RS02695 SM00771 ZipA, C-terminal domain (FtsZ-binding) CPU03_RS02740 SM00646 CPU03_RS02740 CPU03_RS02760 SM00919 Malic enzyme, NAD binding domain CPU03_RS02760 SM01274 CPU03_RS02760 CPU03_RS02775 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain CPU03_RS02815 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPU03_RS02830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS02830 SM00387 Histidine kinase-like ATPases CPU03_RS02835 SM00421 helix_turn_helix, Lux Regulon CPU03_RS02835 SM00448 cheY-homologous receiver domain CPU03_RS02890 SM01130 CPU03_RS02890 CPU03_RS02960 SM00091 PAS domain CPU03_RS02960 SM00387 Histidine kinase-like ATPases CPU03_RS02960 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS02965 SM00448 cheY-homologous receiver domain CPU03_RS02965 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS02985 SM00871 Bacterial transcription activator, effector binding domain CPU03_RS03025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS03025 SM00387 Histidine kinase-like ATPases CPU03_RS03025 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS03030 SM00448 cheY-homologous receiver domain CPU03_RS03030 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS03075 SM00450 Rhodanese Homology Domain CPU03_RS03080 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPU03_RS03110 SM00244 prohibitin homologues CPU03_RS03120 SM00422 helix_turn_helix, mercury resistance CPU03_RS03190 SM00387 Histidine kinase-like ATPases CPU03_RS03195 SM00493 CPU03_RS03195 CPU03_RS03205 SM00382 ATPases associated with a variety of cellular activities CPU03_RS03295 SM00938 Nitrogen regulatory protein P-II CPU03_RS03300 SM00344 helix_turn_helix ASNC type CPU03_RS03330 SM00411 bacterial (prokaryotic) histone like domain CPU03_RS03335 SM00382 ATPases associated with a variety of cellular activities CPU03_RS03335 SM00464 Found in ATP-dependent protease La (LON) CPU03_RS03340 SM00382 ATPases associated with a variety of cellular activities CPU03_RS03340 SM00994 ClpX C4-type zinc finger CPU03_RS03340 SM01086 C-terminal, D2-small domain, of ClpB protein CPU03_RS03410 SM00382 ATPases associated with a variety of cellular activities CPU03_RS03415 SM00981 CPU03_RS03415 CPU03_RS03430 SM00861 Transketolase, pyrimidine binding domain CPU03_RS03475 SM01323 CPU03_RS03475 CPU03_RS03500 SM00642 Alpha-amylase domain CPU03_RS03525 SM00052 Putative diguanylate phosphodiesterase CPU03_RS03525 SM00267 diguanylate cyclase CPU03_RS03535 SM00924 MgtE intracellular N domain CPU03_RS03540 SM00052 Putative diguanylate phosphodiesterase CPU03_RS03540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CPU03_RS03540 SM00091 PAS domain CPU03_RS03540 SM00267 diguanylate cyclase CPU03_RS03620 SM01130 CPU03_RS03620 CPU03_RS03635 SM00382 ATPases associated with a variety of cellular activities CPU03_RS03680 SM00936 Penicillin-binding protein 5, C-terminal domain CPU03_RS03690 SM00912 haemagglutination activity domain CPU03_RS03785 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS03790 SM00421 helix_turn_helix, Lux Regulon CPU03_RS03820 SM00869 Autotransporter beta-domain CPU03_RS03840 SM00493 CPU03_RS03840 CPU03_RS03840 SM00778 Zinc-binding domain of primase-helicase CPU03_RS03840 SM00885 D5 N terminal like CPU03_RS03895 SM00829 Enoylreductase CPU03_RS03905 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CPU03_RS03985 SM00938 Nitrogen regulatory protein P-II CPU03_RS03995 SM00382 ATPases associated with a variety of cellular activities CPU03_RS03995 SM00448 cheY-homologous receiver domain CPU03_RS04005 SM00387 Histidine kinase-like ATPases CPU03_RS04005 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS04010 SM01211 CPU03_RS04010 CPU03_RS04015 SM00062 Bacterial periplasmic substrate-binding proteins CPU03_RS04025 SM00450 Rhodanese Homology Domain CPU03_RS04060 SM01322 CPU03_RS04060 CPU03_RS04080 SM00977 TilS substrate C-terminal domain CPU03_RS04100 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS04115 SM00481 DNA polymerase alpha chain like domain CPU03_RS04145 SM00935 Outer membrane protein (OmpH-like) CPU03_RS04155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPU03_RS04200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPU03_RS04245 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CPU03_RS04245 SM00475 5'-3' exonuclease CPU03_RS04280 SM00925 MltA specific insert domain CPU03_RS04300 SM00646 CPU03_RS04300 CPU03_RS04385 SM00487 DEAD-like helicases superfamily CPU03_RS04385 SM00490 helicase superfamily c-terminal domain CPU03_RS04385 SM00847 Helicase associated domain (HA2) Add an annotation CPU03_RS04485 SM00420 helix_turn_helix, Deoxyribose operon repressor CPU03_RS04485 SM01134 CPU03_RS04485 CPU03_RS04500 SM00382 ATPases associated with a variety of cellular activities CPU03_RS04505 SM00448 cheY-homologous receiver domain CPU03_RS04505 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS04510 SM00947 Carbonic anhydrase CPU03_RS04565 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS04565 SM00895 CPU03_RS04565 CPU03_RS04580 SM00644 CPU03_RS04580 CPU03_RS04600 SM01240 CPU03_RS04600 CPU03_RS04625 SM00957 SecA DEAD-like domain CPU03_RS04625 SM00958 SecA preprotein cross-linking domain CPU03_RS04645 SM00864 Tubulin/FtsZ family, GTPase domain CPU03_RS04645 SM00865 Tubulin/FtsZ family, C-terminal domain CPU03_RS04650 SM00842 Cell division protein FtsA CPU03_RS04720 SM00354 helix_turn _helix lactose operon repressor CPU03_RS04745 SM00917 LeuA allosteric (dimerisation) domain CPU03_RS04750 SM01329 CPU03_RS04750 CPU03_RS04785 SM00382 ATPases associated with a variety of cellular activities CPU03_RS04790 SM00486 DNA polymerase type-B family CPU03_RS04795 SM00487 DEAD-like helicases superfamily CPU03_RS04795 SM00490 helicase superfamily c-terminal domain CPU03_RS04805 SM00271 DnaJ molecular chaperone homology domain CPU03_RS04825 SM00650 Ribosomal RNA adenine dimethylases CPU03_RS04855 SM00851 MGS-like domain CPU03_RS04855 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPU03_RS04860 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CPU03_RS04870 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CPU03_RS04875 SM01092 CO dehydrogenase flavoprotein C-terminal domain CPU03_RS04910 SM00904 Riboflavin kinase CPU03_RS04935 SM00271 DnaJ molecular chaperone homology domain CPU03_RS04955 SM00852 Probable molybdopterin binding domain CPU03_RS05015 SM00448 cheY-homologous receiver domain CPU03_RS05015 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS05020 SM01321 CPU03_RS05020 CPU03_RS05025 SM00967 RNA 2'-O ribose methyltransferase substrate binding CPU03_RS05035 SM01144 CPU03_RS05035 CPU03_RS05040 SM00881 CoA binding domain CPU03_RS05045 SM00155 Phospholipase D. Active site motifs. CPU03_RS05080 SM00382 ATPases associated with a variety of cellular activities CPU03_RS05080 SM00930 CPU03_RS05080 CPU03_RS05115 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS05115 SM00871 Bacterial transcription activator, effector binding domain CPU03_RS05120 SM00855 Phosphoglycerate mutase family CPU03_RS05140 SM00382 ATPases associated with a variety of cellular activities CPU03_RS05145 SM00382 ATPases associated with a variety of cellular activities CPU03_RS05185 SM00749 bacterial OsmY and nodulation domain CPU03_RS05200 SM00073 Histidine Phosphotransfer domain CPU03_RS05200 SM00091 PAS domain CPU03_RS05200 SM00387 Histidine kinase-like ATPases CPU03_RS05200 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS05200 SM00448 cheY-homologous receiver domain CPU03_RS05205 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS05285 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPU03_RS05290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPU03_RS05325 SM00382 ATPases associated with a variety of cellular activities CPU03_RS05355 SM00382 ATPases associated with a variety of cellular activities CPU03_RS05410 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CPU03_RS05415 SM01133 CPU03_RS05415 CPU03_RS05520 SM01118 CPU03_RS05520 CPU03_RS05535 SM00287 Bacterial SH3 domain homologues CPU03_RS05550 SM00905 Dihydroneopterin aldolase CPU03_RS05555 SM01207 CPU03_RS05555 CPU03_RS05570 SM00400 zinc finger CPU03_RS05570 SM00493 CPU03_RS05570 CPU03_RS05570 SM00766 DNA primase DnaG DnaB-binding CPU03_RS05580 SM00986 Uracil DNA glycosylase superfamily CPU03_RS05580 SM00987 UreE urease accessory protein, C-terminal domain CPU03_RS05810 SM00448 cheY-homologous receiver domain CPU03_RS05810 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS05815 SM00387 Histidine kinase-like ATPases CPU03_RS05815 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS05860 SM00858 CPU03_RS05860 CPU03_RS05880 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS05880 SM00895 CPU03_RS05880 CPU03_RS05935 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPU03_RS05985 SM00487 DEAD-like helicases superfamily CPU03_RS05985 SM00490 helicase superfamily c-terminal domain CPU03_RS05990 SM00028 Tetratricopeptide repeats CPU03_RS05995 SM00316 Ribosomal protein S1-like RNA-binding domain CPU03_RS05995 SM00322 K homology RNA-binding domain CPU03_RS06000 SM01387 CPU03_RS06000 CPU03_RS06020 SM00316 Ribosomal protein S1-like RNA-binding domain CPU03_RS06020 SM00322 K homology RNA-binding domain CPU03_RS06055 SM00382 ATPases associated with a variety of cellular activities CPU03_RS06065 SM01103 CPU03_RS06065 CPU03_RS06080 SM00448 cheY-homologous receiver domain CPU03_RS06080 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS06085 SM00387 Histidine kinase-like ATPases CPU03_RS06085 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS06170 SM00116 Domain in cystathionine beta-synthase and other proteins. CPU03_RS06170 SM01091 Transporter associated domain CPU03_RS06250 SM00967 RNA 2'-O ribose methyltransferase substrate binding CPU03_RS06255 SM00316 Ribosomal protein S1-like RNA-binding domain CPU03_RS06255 SM00357 Cold shock protein domain CPU03_RS06255 SM00955 CPU03_RS06255 CPU03_RS06265 SM00788 Adenylosuccinate synthetase CPU03_RS06280 SM00244 prohibitin homologues CPU03_RS06285 SM00244 prohibitin homologues CPU03_RS06305 SM00853 MutL C terminal dimerisation domain CPU03_RS06305 SM01340 CPU03_RS06305 CPU03_RS06310 SM00257 Lysin motif CPU03_RS06310 SM00646 CPU03_RS06310 CPU03_RS06345 SM00479 CPU03_RS06345 CPU03_RS06395 SM00841 Elongation factor P, C-terminal CPU03_RS06395 SM01185 CPU03_RS06395 CPU03_RS06435 SM00883 Chaperonin 10 Kd subunit CPU03_RS06485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS06485 SM00387 Histidine kinase-like ATPases CPU03_RS06485 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS06485 SM00448 cheY-homologous receiver domain CPU03_RS06495 SM00448 cheY-homologous receiver domain CPU03_RS06495 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS06530 SM01007 Class II Aldolase and Adducin N-terminal domain CPU03_RS06555 SM00420 helix_turn_helix, Deoxyribose operon repressor CPU03_RS06555 SM01134 CPU03_RS06555 CPU03_RS06580 SM00731 SprT homologues. CPU03_RS06605 SM00732 Likely ribonuclease with RNase H fold. CPU03_RS06620 SM01152 CPU03_RS06620 CPU03_RS06630 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS06660 SM00478 endonuclease III CPU03_RS06660 SM00525 CPU03_RS06660 CPU03_RS06715 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPU03_RS06755 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS06765 SM01005 Alanine racemase, C-terminal domain CPU03_RS06770 SM00382 ATPases associated with a variety of cellular activities CPU03_RS06810 SM00448 cheY-homologous receiver domain CPU03_RS06815 SM00091 PAS domain CPU03_RS06815 SM00387 Histidine kinase-like ATPases CPU03_RS06820 SM00764 Citrate lyase ligase C-terminal domain CPU03_RS06860 SM00563 Phosphate acyltransferases CPU03_RS06890 SM00382 ATPases associated with a variety of cellular activities CPU03_RS06930 SM01018 B12 binding domain CPU03_RS06945 SM00563 Phosphate acyltransferases CPU03_RS06950 SM00434 DNA Topoisomerase IV CPU03_RS06955 SM00387 Histidine kinase-like ATPases CPU03_RS06955 SM00433 TopoisomeraseII CPU03_RS07015 SM00798 AICARFT/IMPCHase bienzyme CPU03_RS07015 SM00851 MGS-like domain CPU03_RS07020 SM01209 CPU03_RS07020 CPU03_RS07020 SM01210 CPU03_RS07020 CPU03_RS07030 SM00411 bacterial (prokaryotic) histone like domain CPU03_RS07060 SM00663 RNA polymerase I subunit A N-terminus CPU03_RS07085 SM00649 Ribosomal protein L11/L12 CPU03_RS07090 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CPU03_RS07090 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CPU03_RS07200 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CPU03_RS07205 SM01004 Delta-aminolevulinic acid dehydratase CPU03_RS07300 SM00354 helix_turn _helix lactose operon repressor CPU03_RS07320 SM00341 Helicase and RNase D C-terminal CPU03_RS07320 SM00487 DEAD-like helicases superfamily CPU03_RS07320 SM00490 helicase superfamily c-terminal domain CPU03_RS07320 SM00956 CPU03_RS07320 CPU03_RS07375 SM01219 CPU03_RS07375 CPU03_RS07470 SM00984 UDP binding domain CPU03_RS07490 SM00357 Cold shock protein domain CPU03_RS07490 SM00382 ATPases associated with a variety of cellular activities CPU03_RS07490 SM00959 Rho termination factor, N-terminal domain CPU03_RS07500 SM00487 DEAD-like helicases superfamily CPU03_RS07500 SM00490 helicase superfamily c-terminal domain CPU03_RS07565 SM00382 ATPases associated with a variety of cellular activities CPU03_RS07570 SM00829 Enoylreductase CPU03_RS07650 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CPU03_RS07650 SM01232 CPU03_RS07650 CPU03_RS07815 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPU03_RS07875 SM01230 CPU03_RS07875 CPU03_RS07880 SM00091 PAS domain CPU03_RS07880 SM00387 Histidine kinase-like ATPases CPU03_RS07880 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS07885 SM00382 ATPases associated with a variety of cellular activities CPU03_RS07885 SM00448 cheY-homologous receiver domain CPU03_RS07895 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS07915 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CPU03_RS07915 SM00474 3'-5' exonuclease CPU03_RS07915 SM00475 5'-3' exonuclease CPU03_RS07915 SM00482 DNA polymerase A domain CPU03_RS07920 SM00563 Phosphate acyltransferases CPU03_RS07985 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS07985 SM00895 CPU03_RS07985 CPU03_RS07995 SM00354 helix_turn _helix lactose operon repressor CPU03_RS08015 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08030 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08035 SM00327 von Willebrand factor (vWF) type A domain CPU03_RS08045 SM00344 helix_turn_helix ASNC type CPU03_RS08055 SM01228 CPU03_RS08055 CPU03_RS08100 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08140 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08175 SM00463 Small MutS-related domain CPU03_RS08190 SM01234 CPU03_RS08190 CPU03_RS08205 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08205 SM00760 Bacterial dnaA protein helix-turn-helix domain CPU03_RS08210 SM00480 DNA polymerase III beta subunit CPU03_RS08220 SM00387 Histidine kinase-like ATPases CPU03_RS08220 SM00433 TopoisomeraseII CPU03_RS08325 SM00487 DEAD-like helicases superfamily CPU03_RS08325 SM00490 helicase superfamily c-terminal domain CPU03_RS08335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPU03_RS08335 SM00954 Region found in RelA / SpoT proteins CPU03_RS08340 SM01409 CPU03_RS08340 CPU03_RS08345 SM00072 Guanylate kinase homologues. CPU03_RS08370 SM00450 Rhodanese Homology Domain CPU03_RS08390 SM00971 Serine acetyltransferase, N-terminal CPU03_RS08400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS08400 SM00387 Histidine kinase-like ATPases CPU03_RS08400 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS08405 SM00448 cheY-homologous receiver domain CPU03_RS08405 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS08490 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08490 SM01086 C-terminal, D2-small domain, of ClpB protein CPU03_RS08505 SM00354 helix_turn _helix lactose operon repressor CPU03_RS08510 SM00487 DEAD-like helicases superfamily CPU03_RS08510 SM00490 helicase superfamily c-terminal domain CPU03_RS08590 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS08605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS08605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS08610 SM00421 helix_turn_helix, Lux Regulon CPU03_RS08610 SM00448 cheY-homologous receiver domain CPU03_RS08615 SM00387 Histidine kinase-like ATPases CPU03_RS08655 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08660 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08705 SM00028 Tetratricopeptide repeats CPU03_RS08710 SM00052 Putative diguanylate phosphodiesterase CPU03_RS08710 SM00267 diguanylate cyclase CPU03_RS08730 SM00052 Putative diguanylate phosphodiesterase CPU03_RS08760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS08760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS08760 SM00319 Homologues of the ligand binding domain of Tar CPU03_RS08810 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08820 SM00448 cheY-homologous receiver domain CPU03_RS08820 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS08825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS08825 SM00387 Histidine kinase-like ATPases CPU03_RS08825 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS08830 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPU03_RS08860 SM00831 Cation transporter/ATPase, N-terminus CPU03_RS08865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CPU03_RS08870 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPU03_RS08945 SM00382 ATPases associated with a variety of cellular activities CPU03_RS08995 SM00382 ATPases associated with a variety of cellular activities CPU03_RS09010 SM00450 Rhodanese Homology Domain CPU03_RS09020 SM00420 helix_turn_helix, Deoxyribose operon repressor CPU03_RS09020 SM01134 CPU03_RS09020 CPU03_RS09045 SM00642 Alpha-amylase domain CPU03_RS09050 SM00642 Alpha-amylase domain CPU03_RS09070 SM00421 helix_turn_helix, Lux Regulon CPU03_RS09090 SM00100 Cyclic nucleotide-monophosphate binding domain CPU03_RS09090 SM00419 helix_turn_helix, cAMP Regulatory protein CPU03_RS09125 SM00899 CPU03_RS09125 CPU03_RS09135 SM00316 Ribosomal protein S1-like RNA-binding domain CPU03_RS09135 SM00732 Likely ribonuclease with RNase H fold. CPU03_RS09145 SM00448 cheY-homologous receiver domain CPU03_RS09145 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS09150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS09150 SM00387 Histidine kinase-like ATPases CPU03_RS09150 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS09160 SM00450 Rhodanese Homology Domain CPU03_RS09185 SM00363 S4 RNA-binding domain CPU03_RS09300 SM00382 ATPases associated with a variety of cellular activities CPU03_RS09365 SM00838 Elongation factor G C-terminus CPU03_RS09365 SM00889 Elongation factor G, domain IV CPU03_RS09375 SM01403 CPU03_RS09375 CPU03_RS09395 SM01382 CPU03_RS09395 CPU03_RS09395 SM01383 CPU03_RS09395 CPU03_RS09410 SM00322 K homology RNA-binding domain CPU03_RS09430 SM01374 CPU03_RS09430 CPU03_RS09435 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CPU03_RS09500 SM00363 S4 RNA-binding domain CPU03_RS09500 SM01390 CPU03_RS09500 CPU03_RS09505 SM00662 RNA polymerases D CPU03_RS09520 SM00422 helix_turn_helix, mercury resistance CPU03_RS09665 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS09705 SM00091 PAS domain CPU03_RS09705 SM00382 ATPases associated with a variety of cellular activities CPU03_RS09760 SM01092 CO dehydrogenase flavoprotein C-terminal domain CPU03_RS09765 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CPU03_RS09850 SM00878 Biotin carboxylase C-terminal domain CPU03_RS09875 SM00829 Enoylreductase CPU03_RS09880 SM00052 Putative diguanylate phosphodiesterase CPU03_RS09880 SM00267 diguanylate cyclase CPU03_RS09905 SM00316 Ribosomal protein S1-like RNA-binding domain CPU03_RS10030 SM00382 ATPases associated with a variety of cellular activities CPU03_RS10110 SM00387 Histidine kinase-like ATPases CPU03_RS10140 SM00530 Helix-turn-helix XRE-family like proteins CPU03_RS10170 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS10190 SM00257 Lysin motif CPU03_RS10190 SM00634 Bacterial Ig-like domain (group 1) CPU03_RS10240 SM00354 helix_turn _helix lactose operon repressor CPU03_RS10260 SM00354 helix_turn _helix lactose operon repressor CPU03_RS10280 SM00382 ATPases associated with a variety of cellular activities CPU03_RS10295 SM00387 Histidine kinase-like ATPases CPU03_RS10300 SM00448 cheY-homologous receiver domain CPU03_RS10300 SM00850 LytTr DNA-binding domain CPU03_RS10425 SM00100 Cyclic nucleotide-monophosphate binding domain CPU03_RS10485 SM00528 Domain in histone-like proteins of HNS family CPU03_RS10525 SM00861 Transketolase, pyrimidine binding domain CPU03_RS10530 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPU03_RS10595 SM01011 Aminopeptidase P, N-terminal domain CPU03_RS10720 SM00857 Resolvase, N terminal domain CPU03_RS10735 SM00530 Helix-turn-helix XRE-family like proteins CPU03_RS10770 SM00869 Autotransporter beta-domain CPU03_RS10795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CPU03_RS10795 SM00382 ATPases associated with a variety of cellular activities CPU03_RS10885 SM00354 helix_turn _helix lactose operon repressor CPU03_RS10890 SM00354 helix_turn _helix lactose operon repressor CPU03_RS10895 SM00563 Phosphate acyltransferases CPU03_RS10905 SM00098 Alkaline phosphatase homologues CPU03_RS10920 SM00927 DNA mismatch repair enzyme MutH CPU03_RS10930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CPU03_RS10965 SM00257 Lysin motif CPU03_RS10975 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CPU03_RS10975 SM00534 ATPase domain of DNA mismatch repair MUTS family CPU03_RS10980 SM00421 helix_turn_helix, Lux Regulon CPU03_RS10990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS11025 SM00382 ATPases associated with a variety of cellular activities CPU03_RS11035 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPU03_RS11090 SM01091 Transporter associated domain CPU03_RS11100 SM00382 ATPases associated with a variety of cellular activities CPU03_RS11100 SM00962 SRP54-type protein, GTPase domain CPU03_RS11100 SM00963 SRP54-type protein, helical bundle domain CPU03_RS11140 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS11145 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS11150 SM00448 cheY-homologous receiver domain CPU03_RS11150 SM00850 LytTr DNA-binding domain CPU03_RS11160 SM00830 Chorismate mutase type II CPU03_RS11165 SM00830 Chorismate mutase type II CPU03_RS11185 SM00363 S4 RNA-binding domain CPU03_RS11195 SM00382 ATPases associated with a variety of cellular activities CPU03_RS11195 SM01086 C-terminal, D2-small domain, of ClpB protein CPU03_RS11230 SM00257 Lysin motif CPU03_RS11235 SM00849 Metallo-beta-lactamase superfamily CPU03_RS11250 SM00479 CPU03_RS11250 CPU03_RS11305 SM00271 DnaJ molecular chaperone homology domain CPU03_RS11335 SM00562 CPU03_RS11335 CPU03_RS11345 SM00028 Tetratricopeptide repeats CPU03_RS11350 SM00530 Helix-turn-helix XRE-family like proteins CPU03_RS11370 SM00564 beta-propeller repeat CPU03_RS11420 SM00028 Tetratricopeptide repeats CPU03_RS11430 SM00116 Domain in cystathionine beta-synthase and other proteins. CPU03_RS11430 SM01240 CPU03_RS11430 CPU03_RS11515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPU03_RS11520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPU03_RS11525 SM00382 ATPases associated with a variety of cellular activities CPU03_RS11550 SM00347 helix_turn_helix multiple antibiotic resistance protein CPU03_RS11575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CPU03_RS11575 SM00091 PAS domain CPU03_RS11575 SM00267 diguanylate cyclase CPU03_RS11590 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS11605 SM00493 CPU03_RS11605 CPU03_RS11605 SM00778 Zinc-binding domain of primase-helicase CPU03_RS11605 SM00885 D5 N terminal like CPU03_RS11705 SM00986 Uracil DNA glycosylase superfamily CPU03_RS11705 SM00987 UreE urease accessory protein, C-terminal domain CPU03_RS11715 SM00487 DEAD-like helicases superfamily CPU03_RS11715 SM00490 helicase superfamily c-terminal domain CPU03_RS11760 SM00358 Double-stranded RNA binding motif CPU03_RS11760 SM00535 Ribonuclease III family CPU03_RS11785 SM00073 Histidine Phosphotransfer domain CPU03_RS11785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS11785 SM00387 Histidine kinase-like ATPases CPU03_RS11785 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS11785 SM00448 cheY-homologous receiver domain CPU03_RS11795 SM00954 Region found in RelA / SpoT proteins CPU03_RS11810 SM01192 CPU03_RS11810 CPU03_RS11810 SM01193 CPU03_RS11810 CPU03_RS11840 SM00822 CPU03_RS11840 CPU03_RS11850 SM00382 ATPases associated with a variety of cellular activities CPU03_RS11865 SM01001 AIR carboxylase CPU03_RS11870 SM00267 diguanylate cyclase CPU03_RS11885 SM00840 CPU03_RS11885 CPU03_RS11930 SM00634 Bacterial Ig-like domain (group 1) CPU03_RS11935 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS11940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS11970 SM00331 Sigma factor PP2C-like phosphatases CPU03_RS11970 SM00448 cheY-homologous receiver domain CPU03_RS12000 SM00470 ParB-like nuclease domain CPU03_RS12110 SM00893 Electron transfer flavoprotein domain CPU03_RS12115 SM00893 Electron transfer flavoprotein domain CPU03_RS12180 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS12195 SM00936 Penicillin-binding protein 5, C-terminal domain CPU03_RS12260 SM00382 ATPases associated with a variety of cellular activities CPU03_RS12275 SM00062 Bacterial periplasmic substrate-binding proteins CPU03_RS12285 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CPU03_RS12285 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CPU03_RS12290 SM00116 Domain in cystathionine beta-synthase and other proteins. CPU03_RS12290 SM01091 Transporter associated domain CPU03_RS12305 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS12395 SM01081 Putative carbohydrate binding domain CPU03_RS12430 SM00448 cheY-homologous receiver domain CPU03_RS12430 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS12435 SM00387 Histidine kinase-like ATPases CPU03_RS12435 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS12490 SM00421 helix_turn_helix, Lux Regulon CPU03_RS12530 SM00861 Transketolase, pyrimidine binding domain CPU03_RS12545 SM00881 CoA binding domain CPU03_RS12640 SM00855 Phosphoglycerate mutase family CPU03_RS12700 SM00382 ATPases associated with a variety of cellular activities CPU03_RS12715 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS12715 SM00876 Biotin and Thiamin Synthesis associated domain CPU03_RS12735 SM00487 DEAD-like helicases superfamily CPU03_RS12735 SM00490 helicase superfamily c-terminal domain CPU03_RS12770 SM00420 helix_turn_helix, Deoxyribose operon repressor CPU03_RS12770 SM01134 CPU03_RS12770 CPU03_RS12845 SM00507 HNH nucleases CPU03_RS12850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS12850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS12860 SM00382 ATPases associated with a variety of cellular activities CPU03_RS12870 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS12890 SM00833 Cobalamin synthesis protein cobW C-terminal domain CPU03_RS12915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPU03_RS12920 SM00450 Rhodanese Homology Domain CPU03_RS12925 SM00890 Domain of unknown function CPU03_RS12945 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS12945 SM00866 CPU03_RS12945 CPU03_RS12965 SM00155 Phospholipase D. Active site motifs. CPU03_RS12975 SM00155 Phospholipase D. Active site motifs. CPU03_RS12980 SM00357 Cold shock protein domain CPU03_RS13005 SM00382 ATPases associated with a variety of cellular activities CPU03_RS13065 SM00855 Phosphoglycerate mutase family CPU03_RS13070 SM00463 Small MutS-related domain CPU03_RS13110 SM00825 Beta-ketoacyl synthase CPU03_RS13155 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPU03_RS13210 SM00905 Dihydroneopterin aldolase CPU03_RS13235 SM00450 Rhodanese Homology Domain CPU03_RS13270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPU03_RS13290 SM00450 Rhodanese Homology Domain CPU03_RS13325 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CPU03_RS13330 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPU03_RS13330 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPU03_RS13370 SM01217 CPU03_RS13370 CPU03_RS13440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CPU03_RS13465 SM00852 Probable molybdopterin binding domain CPU03_RS13475 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS13530 SM00434 DNA Topoisomerase IV CPU03_RS13535 SM00387 Histidine kinase-like ATPases CPU03_RS13535 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS13535 SM00448 cheY-homologous receiver domain CPU03_RS13540 SM00421 helix_turn_helix, Lux Regulon CPU03_RS13540 SM00448 cheY-homologous receiver domain CPU03_RS13545 SM00387 Histidine kinase-like ATPases CPU03_RS13560 SM00382 ATPases associated with a variety of cellular activities CPU03_RS13575 SM00487 DEAD-like helicases superfamily CPU03_RS13575 SM00490 helicase superfamily c-terminal domain CPU03_RS13580 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS13590 SM01131 CPU03_RS13590 CPU03_RS13600 SM01192 CPU03_RS13600 CPU03_RS13600 SM01193 CPU03_RS13600 CPU03_RS13605 SM00267 diguanylate cyclase CPU03_RS13640 SM00487 DEAD-like helicases superfamily CPU03_RS13640 SM00490 helicase superfamily c-terminal domain CPU03_RS13650 SM00363 S4 RNA-binding domain CPU03_RS13675 SM00382 ATPases associated with a variety of cellular activities CPU03_RS13685 SM00062 Bacterial periplasmic substrate-binding proteins CPU03_RS13685 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPU03_RS13720 SM00833 Cobalamin synthesis protein cobW C-terminal domain CPU03_RS13730 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS13730 SM00895 CPU03_RS13730 CPU03_RS13735 SM00052 Putative diguanylate phosphodiesterase CPU03_RS13740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS13740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS13755 SM00841 Elongation factor P, C-terminal CPU03_RS13755 SM01185 CPU03_RS13755 CPU03_RS13830 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS13835 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS13850 SM00936 Penicillin-binding protein 5, C-terminal domain CPU03_RS13865 SM00420 helix_turn_helix, Deoxyribose operon repressor CPU03_RS13865 SM01134 CPU03_RS13865 CPU03_RS13870 SM00014 Acid phosphatase homologues CPU03_RS13895 SM00354 helix_turn _helix lactose operon repressor CPU03_RS13950 SM00062 Bacterial periplasmic substrate-binding proteins CPU03_RS13950 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPU03_RS13965 SM00062 Bacterial periplasmic substrate-binding proteins CPU03_RS13965 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPU03_RS13970 SM00382 ATPases associated with a variety of cellular activities CPU03_RS13995 SM00421 helix_turn_helix, Lux Regulon CPU03_RS14000 SM00644 CPU03_RS14000 CPU03_RS14090 SM00357 Cold shock protein domain CPU03_RS14100 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14100 SM01086 C-terminal, D2-small domain, of ClpB protein CPU03_RS14105 SM00316 Ribosomal protein S1-like RNA-binding domain CPU03_RS14115 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14120 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14130 SM00344 helix_turn_helix ASNC type CPU03_RS14135 SM00843 CPU03_RS14135 CPU03_RS14145 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14155 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPU03_RS14235 SM00870 CPU03_RS14235 CPU03_RS14255 SM00316 Ribosomal protein S1-like RNA-binding domain CPU03_RS14260 SM00411 bacterial (prokaryotic) histone like domain CPU03_RS14270 SM00849 Metallo-beta-lactamase superfamily CPU03_RS14275 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14285 SM00357 Cold shock protein domain CPU03_RS14290 SM00357 Cold shock protein domain CPU03_RS14360 SM00849 Metallo-beta-lactamase superfamily CPU03_RS14410 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14475 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14490 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14525 SM00226 Low molecular weight phosphatase family CPU03_RS14545 SM00316 Ribosomal protein S1-like RNA-binding domain CPU03_RS14550 SM00363 S4 RNA-binding domain CPU03_RS14580 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CPU03_RS14585 SM00822 CPU03_RS14585 CPU03_RS14595 SM00825 Beta-ketoacyl synthase CPU03_RS14640 SM00028 Tetratricopeptide repeats CPU03_RS14645 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CPU03_RS14670 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS14680 SM00421 helix_turn_helix, Lux Regulon CPU03_RS14700 SM00420 helix_turn_helix, Deoxyribose operon repressor CPU03_RS14700 SM01134 CPU03_RS14700 CPU03_RS14720 SM00487 DEAD-like helicases superfamily CPU03_RS14720 SM00490 helicase superfamily c-terminal domain CPU03_RS14720 SM00982 CPU03_RS14720 CPU03_RS14720 SM01058 CarD-like/TRCF domain CPU03_RS14730 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14750 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CPU03_RS14755 SM00387 Histidine kinase-like ATPases CPU03_RS14760 SM00448 cheY-homologous receiver domain CPU03_RS14760 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS14770 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS14770 SM00866 CPU03_RS14770 CPU03_RS14785 SM00267 diguanylate cyclase CPU03_RS14805 SM01329 CPU03_RS14805 CPU03_RS14820 SM00421 helix_turn_helix, Lux Regulon CPU03_RS14820 SM00448 cheY-homologous receiver domain CPU03_RS14825 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPU03_RS14825 SM00465 GIY-YIG type nucleases (URI domain) CPU03_RS14900 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS14920 SM00882 Coenzyme A transferase CPU03_RS14925 SM00882 Coenzyme A transferase CPU03_RS14930 SM00382 ATPases associated with a variety of cellular activities CPU03_RS14930 SM00448 cheY-homologous receiver domain CPU03_RS14935 SM00091 PAS domain CPU03_RS14935 SM00387 Histidine kinase-like ATPases CPU03_RS14935 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS14990 SM00382 ATPases associated with a variety of cellular activities CPU03_RS15090 SM01134 CPU03_RS15090 CPU03_RS15150 SM00382 ATPases associated with a variety of cellular activities CPU03_RS15265 SM00382 ATPases associated with a variety of cellular activities CPU03_RS15270 SM00382 ATPases associated with a variety of cellular activities CPU03_RS15295 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS15295 SM00895 CPU03_RS15295 CPU03_RS15300 SM01130 CPU03_RS15300 CPU03_RS15335 SM00903 Flavin reductase like domain CPU03_RS15345 SM00347 helix_turn_helix multiple antibiotic resistance protein CPU03_RS15400 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS15415 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPU03_RS15415 SM00866 CPU03_RS15415 CPU03_RS15430 SM00382 ATPases associated with a variety of cellular activities CPU03_RS15555 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS15565 SM00247 Beta/gamma crystallins CPU03_RS15570 SM00267 diguanylate cyclase CPU03_RS15570 SM00448 cheY-homologous receiver domain CPU03_RS15575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CPU03_RS15575 SM00091 PAS domain CPU03_RS15575 SM00387 Histidine kinase-like ATPases CPU03_RS15575 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS15575 SM00448 cheY-homologous receiver domain CPU03_RS15575 SM01079 CPU03_RS15575 CPU03_RS15605 SM00267 diguanylate cyclase CPU03_RS15635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPU03_RS15665 SM00226 Low molecular weight phosphatase family CPU03_RS15670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPU03_RS15740 SM01022 CPU03_RS15740 CPU03_RS15855 SM00382 ATPases associated with a variety of cellular activities CPU03_RS15860 SM00530 Helix-turn-helix XRE-family like proteins CPU03_RS15865 SM00530 Helix-turn-helix XRE-family like proteins CPU03_RS15895 SM00382 ATPases associated with a variety of cellular activities CPU03_RS15920 SM00530 Helix-turn-helix XRE-family like proteins CPU03_RS16080 SM00052 Putative diguanylate phosphodiesterase CPU03_RS16105 SM00421 helix_turn_helix, Lux Regulon CPU03_RS16105 SM00448 cheY-homologous receiver domain CPU03_RS16110 SM00387 Histidine kinase-like ATPases CPU03_RS16125 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPU03_RS16140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CPU03_RS16145 SM00945 ProQ/FINO family CPU03_RS16150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPU03_RS16150 SM00245 tail specific protease CPU03_RS16155 SM00642 Alpha-amylase domain CPU03_RS16180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS16180 SM00387 Histidine kinase-like ATPases CPU03_RS16180 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS16185 SM00448 cheY-homologous receiver domain CPU03_RS16185 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS16225 SM00382 ATPases associated with a variety of cellular activities CPU03_RS16235 SM00354 helix_turn _helix lactose operon repressor CPU03_RS16265 SM00479 CPU03_RS16265 CPU03_RS16275 SM00347 helix_turn_helix multiple antibiotic resistance protein CPU03_RS16300 SM00363 S4 RNA-binding domain CPU03_RS16320 SM00478 endonuclease III CPU03_RS16320 SM00525 CPU03_RS16320 CPU03_RS16330 SM00900 CPU03_RS16330 CPU03_RS16420 SM01235 CPU03_RS16420 CPU03_RS16455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CPU03_RS16455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPU03_RS16485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CPU03_RS16485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS16490 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS16520 SM00100 Cyclic nucleotide-monophosphate binding domain CPU03_RS16520 SM00419 helix_turn_helix, cAMP Regulatory protein CPU03_RS16540 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CPU03_RS16540 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CPU03_RS16565 SM00448 cheY-homologous receiver domain CPU03_RS16565 SM00862 Transcriptional regulatory protein, C terminal CPU03_RS16570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPU03_RS16570 SM00387 Histidine kinase-like ATPases CPU03_RS16570 SM00388 His Kinase A (phosphoacceptor) domain CPU03_RS16600 SM00382 ATPases associated with a variety of cellular activities CPU03_RS16600 SM00487 DEAD-like helicases superfamily CPU03_RS16600 SM00490 helicase superfamily c-terminal domain CPU03_RS16600 SM00847 Helicase associated domain (HA2) Add an annotation CPU03_RS16650 SM00890 Domain of unknown function CPU03_RS16705 SM00729 Elongator protein 3, MiaB family, Radical SAM CPU03_RS16745 SM00382 ATPases associated with a variety of cellular activities CPU03_RS16765 SM00382 ATPases associated with a variety of cellular activities CPU03_RS16780 SM00411 bacterial (prokaryotic) histone like domain CPU03_RS16785 SM00873 B3/4 domain CPU03_RS16785 SM00874 tRNA synthetase B5 domain CPU03_RS16785 SM00896 Ferredoxin-fold anticodon binding domain CPU03_RS16810 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPU03_RS16885 SM00530 Helix-turn-helix XRE-family like proteins CPU03_RS16895 SM00382 ATPases associated with a variety of cellular activities CPU03_RS16935 SM00966 SpoVT / AbrB like domain CPU03_RS16945 SM00052 Putative diguanylate phosphodiesterase CPU03_RS17005 SM00342 helix_turn_helix, arabinose operon control protein CPU03_RS17060 SM00945 ProQ/FINO family CPU03_RS17230 SM00470 ParB-like nuclease domain